BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0850900 Os03g0850900|AK062526
(125 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0850900 Similar to Chemocyanin precursor (Basic blue p... 210 2e-55
Os03g0709300 Similar to Chemocyanin precursor (Basic blue p... 168 1e-42
Os02g0731400 Similar to Chemocyanin precursor (Basic blue p... 110 2e-25
Os03g0259100 Similar to Basic blue protein (Cusacyanin) (Pl... 105 1e-23
Os02g0257100 Cupredoxin domain containing protein 100 3e-22
Os03g0709100 Similar to Basic blue protein (Cusacyanin) (Pl... 99 6e-22
Os06g0266300 95 2e-20
Os02g0256800 Cupredoxin domain containing protein 93 5e-20
Os04g0422200 88 1e-18
Os04g0545600 Similar to Uclacyanin 3-like protein 82 1e-16
Os08g0138200 Cupredoxin domain containing protein 80 3e-16
Os03g0791300 79 8e-16
Os06g0218600 Cupredoxin domain containing protein 78 1e-15
Os08g0138100 77 4e-15
Os11g0428800 Plastocyanin-like domain containing protein 76 5e-15
Os08g0138400 Plastocyanin-like domain containing protein 75 2e-14
Os02g0653200 Plastocyanin-like domain containing protein 74 2e-14
Os06g0721800 Cupredoxin domain containing protein 74 2e-14
Os06g0718400 74 3e-14
AY569612 73 4e-14
Os09g0572700 Cupredoxin domain containing protein 73 5e-14
Os08g0137800 Cupredoxin domain containing protein 73 6e-14
Os09g0469300 Cupredoxin domain containing protein 72 8e-14
Os08g0482600 Plastocyanin-like domain containing protein 72 8e-14
Os07g0165900 72 1e-13
Os08g0137900 Similar to Chemocyanin precursor (Basic blue p... 70 5e-13
Os03g0807500 Cupredoxin domain containing protein 67 3e-12
Os12g0150500 Cupredoxin domain containing protein 65 2e-11
Os04g0545400 Plastocyanin-like domain containing protein 64 3e-11
Os07g0105000 Cupredoxin domain containing protein 63 6e-11
Os08g0137400 Cupredoxin domain containing protein 62 8e-11
>Os03g0850900 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 125
Score = 210 bits (534), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/125 (84%), Positives = 106/125 (84%)
Query: 1 MAGRGSAMAAXXXXXXXXXXXHGEMAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVLVF 60
MAGRGSAMAA HGEMAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVLVF
Sbjct: 1 MAGRGSAMAAVGVLVLLCVLLHGEMAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVLVF 60
Query: 61 KYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKI 120
KYDSSAH GYKGCTAAPRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKI
Sbjct: 61 KYDSSAHNVVAVNAAGYKGCTAAPRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKI 120
Query: 121 AVTAA 125
AVTAA
Sbjct: 121 AVTAA 125
>Os03g0709300 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 129
Score = 168 bits (425), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 94/127 (74%), Gaps = 5/127 (3%)
Query: 3 GRGSAM----AAXXXXXXXXXXXHGEMAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVL 58
GRGSA AA HGE+AESAV+TVGDRGGWG +G W GKRF+AGDVL
Sbjct: 4 GRGSAAGRRNAAVLAMVLLCVLLHGELAESAVYTVGDRGGWGFNSGGWLRGKRFRAGDVL 63
Query: 59 VFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGM 118
VFKY SAH GYK C+ APRGAKVYKSG+DRVTLARGTNYFIC+FPGHCQAGM
Sbjct: 64 VFKYSPSAHNVVAVNAAGYKSCS-APRGAKVYKSGSDRVTLARGTNYFICSFPGHCQAGM 122
Query: 119 KIAVTAA 125
KIAVTAA
Sbjct: 123 KIAVTAA 129
>Os02g0731400 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 134
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/100 (52%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 25 MAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAP 84
+AE+A +TVGD GW A WA GK F+AGDVL FKY++ H Y+ CT P
Sbjct: 35 LAEAARYTVGDSSGWRFYAEGWAKGKTFRAGDVLEFKYNAVVHDVAAVDLAAYRSCTV-P 93
Query: 85 RGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAVTA 124
+G + +SG D+VTL +GT+YFIC PGHC+AGMK+AV A
Sbjct: 94 KGVRKMRSGRDKVTLRKGTHYFICTEPGHCKAGMKLAVRA 133
>Os03g0259100 Similar to Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)
Length = 120
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 7/102 (6%)
Query: 24 EMAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA 83
++A +A + V W GA SW+ GK F+AGDVLVF YD S H GY GC +
Sbjct: 26 DVAAAATYNVD----WSFGADSWSKGKNFRAGDVLVFSYDPSVHNVVAVDAGGYSGCRES 81
Query: 84 PRGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAVTAA 125
G K Y SGNDR+TL RGT+YFIC+F GHC AGMK+AVTA+
Sbjct: 82 --GTK-YSSGNDRITLGRGTSYFICSFSGHCGAGMKMAVTAS 120
>Os02g0257100 Cupredoxin domain containing protein
Length = 122
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 33 VGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKS 92
VGD GW G W NGK FK GDVLVFKY H GY GC G K Y S
Sbjct: 31 VGDDKGWTFGVAGWENGKAFKVGDVLVFKYSPMMHNVLQVDHAGYDGCKVGA-GDKKYAS 89
Query: 93 GNDRVTLARGTNYFICNFPGHCQAGMKIAV 122
GNDR+TLA G +FIC FPGHC GMKIAV
Sbjct: 90 GNDRITLAAGKVFFICGFPGHCANGMKIAV 119
>Os03g0709100 Similar to Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)
Length = 131
Score = 99.4 bits (246), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 25 MAESAVFTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAP 84
+A++A + VGD GW +G+GSW +GK+F AGD+LVF+Y H GY C P
Sbjct: 32 VADAATYYVGDSLGWSLGSGSWPSGKKFHAGDILVFRYLPWMHNVVAVDEDGYADCNPPP 91
Query: 85 RGAKVYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAVTAA 125
++ Y SG+D V LARG N+F+C GHC GMK+ VTA
Sbjct: 92 F-SRYYTSGSDSVRLARGDNFFVCTRYGHCNLGMKMVVTAV 131
>Os06g0266300
Length = 417
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 30 VFTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAK- 88
+ VGD GWG W GK F AGDVLVFKY+ H GY+ C PR
Sbjct: 43 TYYVGDAAGWGRNLDWWLAGKTFYAGDVLVFKYNKEYHDVAVVGGKGYRRC-KVPRNKDT 101
Query: 89 -VYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAVTA 124
V ++G D+VTL RG NYFIC PGHC AGMK+AV A
Sbjct: 102 AVLRTGYDQVTLRRGNNYFICGMPGHCDAGMKLAVKA 138
>Os02g0256800 Cupredoxin domain containing protein
Length = 126
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/93 (49%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 31 FTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA-PRGAKV 89
+ VGD GW G W NGKR + GD LVFKYD+ H GY GCT P +KV
Sbjct: 30 WAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGP--SKV 87
Query: 90 YKSGNDRVTLARGTNYFICNFPGHCQAGMKIAV 122
Y SG+DR+ LA G +FIC+ HC AGMK+ V
Sbjct: 88 YNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
>Os04g0422200
Length = 137
Score = 88.2 bits (217), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/95 (51%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 31 FTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVY 90
+ VGD GW G W N K FKAGDVLVF YD+SAH Y C AP A Y
Sbjct: 43 WPVGDGAGWSPGVVGWPNYKPFKAGDVLVFSYDASAHNVVVVGDVDYALCR-APANATAY 101
Query: 91 KSGNDRVTLARGTNYFICNFPGHCQAG-MKIAVTA 124
SG+DRV L G +F+ FPG C G MKIAVTA
Sbjct: 102 GSGDDRVALPPGVTFFVSGFPGDCDKGMMKIAVTA 136
>Os04g0545600 Similar to Uclacyanin 3-like protein
Length = 191
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 31 FTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAK 88
+TVGD GW G +WA GK F GD L+F+Y S+ H + C+AA +
Sbjct: 36 YTVGDSSGWTTGVDYTAWARGKTFNIGDTLLFQYTSAGHSVVEVSEADHTSCSAA-NPLR 94
Query: 89 VYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTAA 125
YK G VTL R GT YFIC GHC AGMK+ VT A
Sbjct: 95 SYKDGTTIVTLTRSGTRYFICGSTGHCGAGMKLTVTVA 132
>Os08g0138200 Cupredoxin domain containing protein
Length = 190
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 46 WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTLAR-GTN 104
WA+ F+AGD LVF+Y +AH GY C+AA A + SG+D V LA GT
Sbjct: 48 WASAATFRAGDRLVFRYSPAAHDVVEVTKAGYDACSAASPIAT-FNSGDDTVPLAAVGTR 106
Query: 105 YFICNFPGHCQAGMKIAV 122
YFIC FPGHC AGMK+AV
Sbjct: 107 YFICGFPGHCAAGMKLAV 124
>Os03g0791300
Length = 133
Score = 79.0 bits (193), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Query: 26 AESAVFTVGDRGGW--GMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA 83
A + + VGD GW G+ +WA+GKRFK GD L F Y AH G A
Sbjct: 30 ASATAYRVGDDSGWDNGVDYDAWAHGKRFKVGDTLEFLYAEGAHNVVVVEDEGSFEACVA 89
Query: 84 PRGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
P A SG+D V L + G FIC+F GHCQ+GMK+AV
Sbjct: 90 PANAPTLSSGDDTVALNQAGRWLFICSFDGHCQSGMKLAV 129
>Os06g0218600 Cupredoxin domain containing protein
Length = 198
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 31 FTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAK 88
+TVGD GW MGA +WA+ K+FK GD LVF Y AH Y CTA+ +
Sbjct: 25 YTVGDTSGWAMGADYTTWASDKKFKMGDTLVFNYAGGAHSVDEVSAADYAACTAS-NALQ 83
Query: 89 VYKSGNDRVTL-ARGTNYFICNFPGHCQAGMKIAV 122
SG VTL G +YFIC GHC GMK+ V
Sbjct: 84 SDSSGTTTVTLKTAGKHYFICGIAGHCSNGMKLVV 118
>Os08g0138100
Length = 195
Score = 76.6 bits (187), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 46 WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGNDRVTL-ARGTN 104
W + F+ GD LVFKY +AH GY C+++ + SG+D V L A GT
Sbjct: 47 WVSAVTFRVGDQLVFKYSPAAHDVVEVTKAGYDSCSSS-GPVATFNSGDDTVPLTATGTR 105
Query: 105 YFICNFPGHCQAGMKIAV 122
YF+C FPGHC AGMKIAV
Sbjct: 106 YFMCGFPGHCAAGMKIAV 123
>Os11g0428800 Plastocyanin-like domain containing protein
Length = 124
Score = 76.3 bits (186), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Query: 25 MAESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTA 82
+AE+ V VGD GW SWA+GK F AGD LVF Y AH Y+ C
Sbjct: 23 LAETHV--VGDSNGWDFSVSFDSWADGKVFAAGDTLVFNYKPGAHNVLAVDAATYRSCKV 80
Query: 83 APRGAKVYK-SGNDRVTLARGTNYFICNFPGHCQAGMKIAVTA 124
V +G L +G NY+IC PGHC AGMK+ V A
Sbjct: 81 GSSADSVAAATGTASFLLKKGVNYYICGVPGHCAAGMKLRVVA 123
>Os08g0138400 Plastocyanin-like domain containing protein
Length = 190
Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 51/89 (57%), Gaps = 4/89 (4%)
Query: 37 GGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVYKSGN 94
GGW + SWA+ F+ D LVFKY ++AH GY C+A+ A V+++G
Sbjct: 29 GGWDLQTNYTSWASSITFRLDDKLVFKYSAAAHDVVEVTKDGYLSCSASSPIA-VHRTGE 87
Query: 95 DRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
D V L R G YFIC PGHC AGMK+ V
Sbjct: 88 DAVELGRLGRRYFICGVPGHCDAGMKLEV 116
>Os02g0653200 Plastocyanin-like domain containing protein
Length = 202
Score = 74.3 bits (181), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 31 FTVGDRGGW--GMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAK 88
+TVGD GW G+ +WA K F GD LVF+Y S H Y C+A+ +
Sbjct: 28 YTVGDTSGWSSGVDYDTWAKSKTFSVGDSLVFQY-SMMHTVAEVSSADYSACSAS-NSIQ 85
Query: 89 VYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVT 123
Y N ++ L + GT YFIC GHC GMK+AVT
Sbjct: 86 SYSDQNTKIALTKPGTRYFICGTSGHCSGGMKLAVT 121
>Os06g0721800 Cupredoxin domain containing protein
Length = 166
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 26 AESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA 83
A +A +TVGD G W G +W++ F AGD+LVF+Y S H Y+ C
Sbjct: 22 ATAAEYTVGD-GPWDTGTNYATWSDKHAFLAGDILVFQYVRSQHNVLQVTEATYRSCDTG 80
Query: 84 PRGA----KVYKSGNDRVTLAR--GTNYFICNFPGHCQAGMKIAV 122
G K Y +G DRV L T +FIC+FPGHC GM++AV
Sbjct: 81 GGGVAGVIKSYDTGYDRVQLTEPNATYWFICDFPGHCLGGMRLAV 125
>Os06g0718400
Length = 182
Score = 73.9 bits (180), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Query: 26 AESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAA 83
A +A +TVGD G W G +W++ F AGD+LVF+Y S H Y+ C
Sbjct: 22 ATAAEYTVGD-GPWDTGTNYATWSDKHAFLAGDILVFQYVRSQHNVLQVTEATYRSCDTG 80
Query: 84 PRGA----KVYKSGNDRVTLAR--GTNYFICNFPGHCQAGMKIAV 122
G K Y +G DRV L T +FIC+FPGHC GM++AV
Sbjct: 81 GGGVAGVIKSYDTGYDRVQLTEPNATYWFICDFPGHCLGGMRLAV 125
>AY569612
Length = 211
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 25 MAESAVFTVGDRGG-WGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCT 81
MA +A + VG+ GG W + +W KRF GD +VFKY + H GY C+
Sbjct: 21 MASAATYNVGEPGGAWDLTTNYTNWVAQKRFHPGDQIVFKYSAQRHDVVEVNKAGYDSCS 80
Query: 82 AAPRGAKVYKSGNDRVTL-ARGTNYFICNFPGHCQA----GMKIAV 122
+ + +GND + L + GT YFIC FPGHC MKI +
Sbjct: 81 TS-TSIATHTTGNDVIPLTSTGTRYFICGFPGHCTTTGTGNMKIQI 125
>Os09g0572700 Cupredoxin domain containing protein
Length = 172
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 25 MAESAVFTVGDRGG-WGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCT 81
MA +A + VG+ GG W + +W KRF GD +VFKY + H GY C+
Sbjct: 21 MASAATYNVGEPGGAWDLTTNYTNWVAQKRFHPGDQIVFKYSAQRHDVVEVNKAGYDSCS 80
Query: 82 AAPRGAKVYKSGNDRVTL-ARGTNYFICNFPGHCQA----GMKIAV 122
+ A + +GND + L + GT YFIC FPGHC MKI +
Sbjct: 81 TSTSIAT-HTTGNDVIPLTSTGTRYFICGFPGHCTTTGTGNMKIQI 125
>Os08g0137800 Cupredoxin domain containing protein
Length = 190
Score = 72.8 bits (177), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 29 AVFTVG-DRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPR 85
A +TVG G W + W + F+AGD +VFKY +AH Y C+++
Sbjct: 25 ATYTVGAPSGSWDLRTNYDQWVSNINFRAGDQIVFKYSPAAHDVVEVNKADYDSCSSS-S 83
Query: 86 GAKVYKSGNDRVTL-ARGTNYFICNFPGHCQAGMKIAV 122
+ SG+D + L A GT YFIC F GHC GMK+AV
Sbjct: 84 PIATFNSGDDTIPLTATGTRYFICGFNGHCTGGMKVAV 121
>Os09g0469300 Cupredoxin domain containing protein
Length = 152
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 31 FTVGDRGGW--GMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTA-APRGA 87
+TVGD GW G+ +WANGK F+ GD LVF Y + AH + C +P
Sbjct: 25 YTVGDGEGWTTGVNYNNWANGKFFRQGDELVFNYQARAHTVTEVSQTNFDSCNGNSPLSN 84
Query: 88 KVYKSGNDRVTLARGTNYFICNFPGHCQAGMKIAVTA 124
S R++ G +YFIC PGHC +GMK+AV
Sbjct: 85 DNGGSTTIRLSYP-GMHYFICTIPGHCSSGMKLAVNV 120
>Os08g0482600 Plastocyanin-like domain containing protein
Length = 172
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 31 FTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAK 88
F VGD GW G +WA GK F+A D LVF+Y H Y CT + +
Sbjct: 29 FIVGDAQGWNTGVDYTAWAKGKTFEANDTLVFRYARKQHTVTEVTKSDYDACTVSGKPIS 88
Query: 89 VYKSGN--DRVTLARGTNYFICNFPGHCQAGMKIAVTAA 125
++ G + L+ G +YFIC HC +GMK+AVT +
Sbjct: 89 DFEGGALVTFIALSPGEHYFICKIGNHCASGMKLAVTVS 127
>Os07g0165900
Length = 168
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 25 MAESAVFTVGDRGGWGMGAGS--WANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTA 82
M + +TVGD GW + S WA+GK F+ GD LVF Y H + C
Sbjct: 21 MVSATDYTVGDGHGWTLEYPSTNWADGKSFQIGDKLVFTYTKGKHTVTEVDGAAFHACNR 80
Query: 83 APRGAKVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAVTAA 125
+ SGND V L + G +F CN HC+ GMK+ V A
Sbjct: 81 QGNTLMTWNSGNDTVALDKAGKRWFFCNVDNHCELGMKLVVDVA 124
>Os08g0137900 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 188
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 31 FTVG-DRGGWGMGA--GSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGA 87
+TVG G W W + F+ GD LVFKY +AH Y C+++
Sbjct: 25 YTVGAPAGSWDTRTNYAQWVSAITFRVGDQLVFKYSPAAHDVVEVNKADYDSCSSS-SPI 83
Query: 88 KVYKSGNDRVTLAR-GTNYFICNFPGHCQAGMKIAV 122
+ SG+D + LA GT YFIC FPGHC AGMK+AV
Sbjct: 84 STFNSGDDTIPLAAIGTRYFICGFPGHCTAGMKVAV 119
>Os03g0807500 Cupredoxin domain containing protein
Length = 209
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 26 AESAVFTVGDRGGW----GMGAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCT 81
+ +AV+ VGD GW + WA K F GD + FKY H Y CT
Sbjct: 21 SSAAVYKVGDTSGWTILGNVNYTDWAVKKTFHVGDTIEFKYPQGIHNVVEVKKADYDSCT 80
Query: 82 AAPRGAKVYKSGNDRVTL-ARGTNYFICNFPGHCQAGMKIAV 122
+ A + SG+D++ + A G +FIC PGHC AG K+ +
Sbjct: 81 NSSPIA-THTSGDDKIAIKAAGHRFFICGVPGHCAAGQKVNI 121
>Os12g0150500 Cupredoxin domain containing protein
Length = 190
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 26 AESAVFTVGDRGG-WGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTA 82
A A +TVG+ GG W +WA+ + GD LVF+YD+SA+ GY C+A
Sbjct: 12 ASGASYTVGEPGGGWDTQTNLTAWASTVDLRRGDQLVFRYDASAYDVVEVTRAGYLSCSA 71
Query: 83 APRGAKVYKSGNDRVTL--ARGTNYFICNFPGHCQAGMKIAV 122
A + ++GND V L A G YFI G C AGMK+ V
Sbjct: 72 ASPVSAALRTGNDVVRLDSAAGWRYFIYGVEGRCAAGMKLQV 113
>Os04g0545400 Plastocyanin-like domain containing protein
Length = 185
Score = 63.5 bits (153), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 25 MAESAVFTVGDRGGWGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTA 82
+AE+A + VG+ GW + A SW +GK F GD LVF+Y S H GY+ C+
Sbjct: 22 VAEAASYNVGNSAGWDISADFPSWLDGKSFFVGDTLVFQY-SKYHTLSEVDEAGYRNCST 80
Query: 83 APRGAKVYKSGNDRVTL-ARGTNYFICNFPGHCQAGMKIAV 122
A GN V L A G YF+C HC GM++ V
Sbjct: 81 A-SAVLSSSDGNTTVALTAPGDRYFVCGNELHCLGGMRLHV 120
>Os07g0105000 Cupredoxin domain containing protein
Length = 195
Score = 62.8 bits (151), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 33 VGDRGGWGM--GAGSWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAPRGAKVY 90
VG G W +W+ ++F GD ++F Y SS H Y C+ A Y
Sbjct: 30 VGGNGAWDTTGNYNAWSVSQKFSQGDSILFTYPSS-HDVVEVPKASYDACSPA-NALASY 87
Query: 91 KSGNDRVTL-ARGTNYFICNFPGHCQAGMKIAVTAA 125
G+ V L A G +YFIC PGHC AGMK+ VT A
Sbjct: 88 TGGSTTVKLDAPGKHYFICGVPGHCAAGMKLEVTVA 123
>Os08g0137400 Cupredoxin domain containing protein
Length = 174
Score = 62.4 bits (150), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 28 SAVFTVGDRGG-WGMGAG--SWANGKRFKAGDVLVFKYDSSAHXXXXXXXXGYKGCTAAP 84
+ +TVG G W M W + F GD L F Y H GY C+ A
Sbjct: 33 ATTYTVGAPDGLWDMETDYKEWVARRTFHPGDKLTFTYSRELHDVVEVTKAGYDACSNA- 91
Query: 85 RGAKVYKSGNDRVTL-ARGTNYFICNFPGHCQAGMKIAV 122
++SGND V L A GT YF+C GHC +GMKI +
Sbjct: 92 NNISAFRSGNDLVALTAVGTRYFLCGLTGHCGSGMKIRI 130
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,817,627
Number of extensions: 139542
Number of successful extensions: 548
Number of sequences better than 1.0e-10: 35
Number of HSP's gapped: 521
Number of HSP's successfully gapped: 35
Length of query: 125
Length of database: 17,035,801
Length adjustment: 88
Effective length of query: 37
Effective length of database: 12,440,969
Effective search space: 460315853
Effective search space used: 460315853
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)