Os03g0709300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chemocyanin precursor (Basic blue protein) (Plantacyanin).
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Os03g0709300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chemocyanin precursor (Basic blue protein) (Plantacyanin).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 428.78 | 0.973 | 6.28 | -2.13 | 3.01 | -2.51 | 1.15 | -3.34 | -0.492 | 9.07 | 7.4 | 3919 | -- | -- |
| 432.7 | 0.969 | 6.22 | -2.14 | 3.02 | -1.91 | 1.12 | -- | -0.483 | 9.04 | 7.5 | 3918 | -- | -- |
| 433.28 | 0.969 | 6.27 | -2.1 | 3.01 | -2.48 | -- | -2.87 | -0.475 | 9.09 | 7.421 | 3905 | -- | -- |
| 435.96 | 0.972 | 6.21 | -2.13 | 3.01 | -1.95 | -- | -- | -0.448 | 9.08 | 7.5 | 3905 | -- | -- |
| 881.23 | 1.38 | 6.39 | -1.79 | -- | -2.46 | -- | -2.71 | -0.681 | -- | 8.298 | 4337 | -- | -- |
| 494.81 | 1.04 | 6.28 | -2.83 | 2.97 | -- | 1.24 | -- | -0.752 | 8.97 | -- | -- | -- | -- |
| 500.05 | 1.05 | 6.28 | -2.79 | 2.97 | -- | -- | -- | -0.751 | 8.99 | -- | -- | -- | -- |
| 888.46 | 1.39 | 6.37 | -2.08 | -- | -2.14 | -- | -- | -0.749 | -- | 8.284 | 4341 | -- | -- |
| 547.71 | 1.09 | 6.21 | -- | 3.24 | -2.48 | -- | -- | -0.198 | 8.92 | 7.5 | 3886 | -- | -- |
| 1005.42 | 1.48 | 6.36 | -2.79 | -- | -- | -- | -- | -0.732 | -- | -- | -- | -- | -- |
| 705.37 | 1.24 | 6.21 | -- | 2.96 | -- | -- | -- | -0.44 | 9.06 | -- | -- | -- | -- |
| 973.78 | 1.45 | 6.27 | -- | -- | -3.22 | -- | -- | -0.156 | -- | 7.9 | 40443 | -- | -- |
| 1211.4 | 1.62 | 6.29 | -- | -- | -- | -- | -- | -0.422 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 411.67 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 3 | 412.17 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 12 | 13 |
| 4 | 412.34 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 9 | 412.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 13 | 412.73 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 18 | 412.94 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 25 | 413.34 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 35 | 413.92 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 47 | 414.37 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 4 | 20 |
| 51 | 414.42 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 62 | 414.83 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 63 | 414.83 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 97 | 415.64 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 98 | 415.64 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 147 | 417.21 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 148 | 417.22 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 149 | 417.23 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 167 | 417.73 | temperature | 20.0 | 14400 | < th | dose dependent | no | NA | NA |
| 173 | 417.89 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 12 | 23 |
| 177 | 417.93 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 183 | 418.00 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 23 |
| 211 | 418.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 243 | 418.78 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 14 | 4 |
| 267 | 419.11 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 279 | 419.22 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 15 |
| 285 | 419.30 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 15 |
| 289 | 419.34 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 316 | 419.65 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 319 | 419.72 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 359 | 420.09 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 363 | 420.13 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 382 | 420.32 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 395 | 420.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 15 |
| 396 | 420.40 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 407 | 420.49 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 415 | 420.54 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 13 | 9 |
| 431 | 420.67 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 450 | 420.84 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 455 | 420.86 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 473 | 421.06 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 496 | 421.21 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 504 | 421.27 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 510 | 421.31 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 518 | 421.36 | temperature | 20.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 532 | 421.51 | temperature | 20.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 551 | 421.61 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 559 | 421.62 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 11 |
| 565 | 421.65 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 618 | 422.09 | temperature | 20.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 651 | 422.33 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 661 | 422.44 | temperature | 20.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 662 | 422.44 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 2 | 17 |
| 671 | 422.51 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 673 | 422.52 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 674 | 422.52 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 705 | 422.74 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 713 | 422.77 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 15 |
| 720 | 422.81 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 767 | 423.09 | radiation | 20.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 822 | 423.32 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 856 | 423.46 | temperature | 15.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 867 | 423.53 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 918 | 423.71 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 21 |
| 935 | 423.77 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 959 | 423.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 981 | 423.98 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 8 |