Os02g0257100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cupredoxin domain containing protein.
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Os02g0257100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cupredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 86.31 | 0.436 | 2.8 | -0.0697 | 0.133 | -0.707 | -0.172 | 3.08 | 0.0789 | 4.9 | 10.5 | 620 | -- | -- |
| 86.82 | 0.434 | 2.8 | -0.028 | 0.141 | -1.26 | -0.215 | -- | 0.0835 | 5.14 | 10.4 | 618 | -- | -- |
| 86.37 | 0.433 | 2.8 | -0.0705 | 0.131 | -0.688 | -- | 3.09 | 0.0793 | 4.49 | 10.5 | 620 | -- | -- |
| 86.74 | 0.434 | 2.81 | -0.0366 | 0.127 | -1.29 | -- | -- | 0.0783 | 4.59 | 10.55 | 627 | -- | -- |
| 87.29 | 0.435 | 2.8 | -0.0647 | -- | -0.704 | -- | 2.87 | 0.0816 | -- | 10.5 | 618 | -- | -- |
| 93.12 | 0.452 | 2.81 | -0.109 | 0.111 | -- | -0.0258 | -- | 0.0453 | 3.14 | -- | -- | -- | -- |
| 93.13 | 0.452 | 2.81 | -0.109 | 0.111 | -- | -- | -- | 0.0455 | 3.12 | -- | -- | -- | -- |
| 87.6 | 0.436 | 2.81 | -0.0331 | -- | -1.26 | -- | -- | 0.081 | -- | 10.5 | 624 | -- | -- |
| 86.78 | 0.434 | 2.8 | -- | 0.126 | -1.3 | -- | -- | 0.0827 | 4.6 | 10.55 | 626 | -- | -- |
| 93.83 | 0.453 | 2.81 | -0.104 | -- | -- | -- | -- | 0.0484 | -- | -- | -- | -- | -- |
| 93.44 | 0.452 | 2.81 | -- | 0.109 | -- | -- | -- | 0.0576 | 3.12 | -- | -- | -- | -- |
| 87.62 | 0.436 | 2.81 | -- | -- | -1.27 | -- | -- | 0.0849 | -- | 10.54 | 625 | -- | -- |
| 94.11 | 0.453 | 2.81 | -- | -- | -- | -- | -- | 0.0599 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.44 | wind | 9.0 | 10 | > th | dose dependent | rect. | 19 | 16 |
| 2 | 80.60 | wind | 9.0 | 10 | > th | dose dependent | rect. | 19 | 3 |
| 15 | 80.65 | wind | 7.0 | 90 | > th | dose independent | rect. | 19 | 4 |
| 135 | 81.98 | wind | 1.0 | 270 | < th | dose dependent | rect. | 2 | 1 |
| 219 | 82.33 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 221 | 82.35 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 225 | 82.41 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 226 | 82.41 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 228 | 82.42 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 229 | 82.42 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 235 | 82.45 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 238 | 82.45 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 242 | 82.45 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 244 | 82.45 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 249 | 82.45 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 250 | 82.45 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 251 | 82.45 | wind | 7.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 253 | 82.45 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 256 | 82.45 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 261 | 82.45 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 263 | 82.46 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 274 | 82.52 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 277 | 82.53 | wind | 1.0 | 270 | < th | dose independent | rect. | 2 | 1 |
| 286 | 82.61 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 291 | 82.63 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 403 | 83.12 | wind | 9.0 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 405 | 83.12 | wind | 9.0 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 943 | 85.80 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 16 |
| 956 | 85.87 | wind | 9.0 | 10 | > th | dose independent | sin | 11 | NA |