Os03g0259100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Basic blue protein (Cusacyanin) (Plantacyanin) (CBP).
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Os03g0259100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Basic blue protein (Cusacyanin) (Plantacyanin) (CBP).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 673.67 | 1.22 | 5.66 | 0.0122 | 2.85 | 0.557 | 1.03 | 5.24 | 0.935 | 10 | 1010 | 12062 | -- | -- |
| 748.64 | 1.28 | 5.55 | 1.79 | 2.83 | 1.46 | 1.03 | -- | 1.01 | 10.1 | 996.7 | 25105 | -- | -- |
| 677.83 | 1.21 | 5.67 | 0.025 | 2.86 | 0.548 | -- | 5.24 | 0.925 | 9.98 | 1010 | 12060 | -- | -- |
| 752.37 | 1.29 | 5.55 | 1.83 | 2.83 | 1.48 | -- | -- | 1.01 | 10.1 | 996.3 | 25627 | -- | -- |
| 1166.51 | 1.59 | 5.74 | -0.0465 | -- | 0.584 | -- | 5.3 | 0.935 | -- | 1010 | 13769 | -- | -- |
| 774.96 | 1.31 | 5.5 | 1.71 | 2.86 | -- | 0.972 | -- | 1.22 | 10 | -- | -- | -- | -- |
| 778.63 | 1.31 | 5.5 | 1.75 | 2.86 | -- | -- | -- | 1.22 | 10 | -- | -- | -- | -- |
| 1234.9 | 1.64 | 5.63 | 1.81 | -- | 1.72 | -- | -- | 0.97 | -- | 996.3 | 25627 | -- | -- |
| 840.26 | 1.36 | 5.59 | -- | 2.83 | 1.25 | -- | -- | 0.838 | 10 | 996.3 | 25627 | -- | -- |
| 1270.97 | 1.67 | 5.58 | 1.71 | -- | -- | -- | -- | 1.22 | -- | -- | -- | -- | -- |
| 859.29 | 1.37 | 5.55 | -- | 2.85 | -- | -- | -- | 1.02 | 9.97 | -- | -- | -- | -- |
| 1285.62 | 1.67 | 5.68 | -- | -- | -0.821 | -- | -- | 0.816 | -- | 1017 | 31013 | -- | -- |
| 1348.46 | 1.71 | 5.62 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 630.54 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 2 | 630.57 | temperature | 30 | 43200 | < th | dose independent | rect. | 24 | 9 |
| 3 | 630.85 | temperature | 30 | 43200 | < th | dose independent | rect. | 22 | 11 |
| 6 | 631.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 7 | 631.27 | temperature | 30 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 13 | 632.23 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 28 | 632.53 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 32 | 633.36 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 60 | 635.45 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 97 | 641.92 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 13 |
| 127 | 642.39 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 168 | 644.80 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 13 |
| 170 | 645.24 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 184 | 646.88 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 244 | 648.45 | temperature | 30 | 43200 | > th | dose dependent | sin | 8 | NA |
| 264 | 649.90 | temperature | 30 | 43200 | > th | dose independent | sin | 9 | NA |
| 271 | 650.20 | temperature | 30 | 43200 | < th | dose independent | sin | 9 | NA |
| 299 | 651.20 | wind | 1 | 43200 | < th | dose independent | rect. | 10 | 16 |
| 349 | 652.85 | temperature | 25 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 356 | 653.15 | wind | 1 | 43200 | < th | dose dependent | sin | 18 | NA |
| 400 | 653.78 | temperature | 25 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 401 | 653.81 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 403 | 653.83 | temperature | 25 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 437 | 654.66 | radiation | 20 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 506 | 655.40 | radiation | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 525 | 655.50 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 568 | 656.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 613 | 656.57 | radiation | 10 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 642 | 656.79 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 663 | 656.93 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 10 |
| 682 | 657.16 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 694 | 657.41 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 698 | 657.46 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 715 | 657.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 723 | 657.54 | temperature | 30 | 43200 | > th | dose dependent | no | NA | NA |
| 819 | 657.60 | humidity | 70 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 827 | 657.67 | humidity | 70 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 854 | 657.88 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 2 |
| 869 | 658.05 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 980 | 658.67 | humidity | 70 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 981 | 658.67 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 11 |