Os02g0731400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chemocyanin precursor (Basic blue protein) (Plantacyanin).
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Os02g0731400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chemocyanin precursor (Basic blue protein) (Plantacyanin).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 620.75 | 1.17 | 7.74 | -3.04 | 2.03 | 4.09 | -0.607 | 10.7 | 0.52 | 20.1 | 90.22 | 4570 | 5.72 | 3.68 |
| 721.27 | 1.25 | 7.84 | -1.92 | 1.92 | 4.23 | -1.57 | -- | 0.717 | 19.6 | 89.12 | 4558 | 6.03 | 2.53 |
| 620.81 | 1.16 | 7.75 | -3.01 | 2.03 | 4.13 | -- | 10.7 | 0.517 | 20.2 | 90.38 | 4576 | 5.72 | 4.02 |
| 722.31 | 1.25 | 7.88 | -1.59 | 1.99 | 4.26 | -- | -- | 0.607 | 20.2 | 89.49 | 4554 | 6.15 | 2.44 |
| 839.34 | 1.35 | 7.74 | -2.85 | -- | 4 | -- | 10.8 | 0.392 | -- | 90.55 | 4362 | 5.77 | 3.98 |
| 919.93 | 1.42 | 8.07 | -1.03 | 1.8 | -- | -1.9 | -- | -0.225 | 19.9 | -- | -- | -- | -- |
| 930.15 | 1.43 | 8.07 | -0.978 | 1.8 | -- | -- | -- | -0.229 | 20.1 | -- | -- | -- | -- |
| 895.58 | 1.39 | 7.85 | -1.55 | -- | 4.31 | -- | -- | 0.515 | -- | 89 | 4035 | 6.15 | 2.76 |
| 765.03 | 1.29 | 7.88 | -- | 1.9 | 4.01 | -- | -- | 0.631 | 20.2 | 90.5 | 4547 | 6.43 | 3.18 |
| 1107.2 | 1.55 | 8.03 | -0.994 | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
| 955.36 | 1.45 | 8.05 | -- | 1.8 | -- | -- | -- | -0.12 | 20 | -- | -- | -- | -- |
| 934.5 | 1.42 | 7.88 | -- | -- | 4.01 | -- | -- | 0.402 | -- | 90.31 | 4012 | 6.86 | 2.87 |
| 1133.28 | 1.57 | 8 | -- | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 646.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 3 | 651.60 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 12 |
| 11 | 654.37 | humidity | 70 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 13 | 654.64 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 31 | 659.10 | humidity | 80 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 35 | 659.77 | humidity | 80 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 42 | 660.99 | humidity | 80 | 14400 | > th | dose independent | sin | 18 | NA |
| 60 | 664.67 | humidity | 80 | 14400 | < th | dose independent | rect. | 13 | 10 |
| 84 | 667.64 | humidity | 90 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 88 | 667.84 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 120 | 671.42 | humidity | 70 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 121 | 671.44 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 138 | 673.55 | humidity | 80 | 14400 | < th | dose independent | sin | 18 | NA |
| 164 | 675.59 | humidity | 90 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 199 | 678.74 | humidity | 70 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 202 | 678.81 | humidity | 70 | 14400 | > th | dose dependent | rect. | 12 | 14 |
| 208 | 679.33 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 229 | 680.31 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 235 | 680.61 | humidity | 90 | 4320 | > th | dose dependent | rect. | 5 | 13 |
| 291 | 683.04 | temperature | 25 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 302 | 683.48 | temperature | 20 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 310 | 683.90 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 326 | 684.73 | humidity | 70 | 14400 | > th | dose dependent | sin | 17 | NA |
| 330 | 684.77 | humidity | 80 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 333 | 684.97 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 371 | 686.15 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 462 | 688.70 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 482 | 689.22 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 487 | 689.37 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 540 | 690.80 | humidity | 80 | 14400 | > th | dose independent | rect. | 20 | 23 |
| 541 | 690.82 | temperature | 25 | 14400 | > th | dose dependent | rect. | 7 | 8 |
| 584 | 691.41 | humidity | 90 | 14400 | < th | dose dependent | rect. | 14 | 12 |
| 601 | 691.62 | humidity | 80 | 14400 | > th | dose independent | no | NA | NA |
| 609 | 691.75 | humidity | 90 | 14400 | < th | dose dependent | rect. | 15 | 10 |
| 624 | 692.09 | humidity | 80 | 14400 | > th | dose independent | rect. | 13 | 23 |
| 680 | 692.97 | humidity | 80 | 14400 | > th | dose independent | rect. | 22 | 23 |
| 708 | 693.32 | humidity | 90 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 713 | 693.40 | temperature | 25 | 14400 | > th | dose dependent | rect. | 24 | 16 |
| 744 | 693.75 | humidity | 90 | 14400 | < th | dose dependent | rect. | 15 | 7 |
| 804 | 694.20 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 826 | 694.40 | temperature | 20 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 857 | 694.67 | temperature | 20 | 14400 | > th | dose dependent | sin | 5 | NA |
| 888 | 694.86 | humidity | 80 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 916 | 695.07 | temperature | 25 | 14400 | > th | dose dependent | sin | 2 | NA |