BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0731400 Os02g0731400|011-047-B07
(134 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G02850.1 | chr2:826630-827720 REVERSE LENGTH=130 107 2e-24
AT5G26330.1 | chr5:9241614-9242635 REVERSE LENGTH=188 87 3e-18
AT3G60270.1 | chr3:22278029-22278762 REVERSE LENGTH=188 74 2e-14
AT3G27200.1 | chr3:10043738-10044340 REVERSE LENGTH=175 74 2e-14
AT1G17800.1 | chr1:6128828-6129391 FORWARD LENGTH=141 73 4e-14
AT2G44790.1 | chr2:18462182-18463232 REVERSE LENGTH=203 73 5e-14
AT2G31050.1 | chr2:13212150-13212752 FORWARD LENGTH=201 72 1e-13
AT2G26720.1 | chr2:11384782-11385402 FORWARD LENGTH=207 70 3e-13
AT3G60280.1 | chr3:22279867-22280633 REVERSE LENGTH=223 69 9e-13
AT2G32300.1 | chr2:13722510-13723464 FORWARD LENGTH=262 68 1e-12
AT5G07475.1 | chr5:2364827-2365536 REVERSE LENGTH=193 67 3e-12
AT1G45063.1 | chr1:17033335-17034886 REVERSE LENGTH=370 65 9e-12
AT3G17675.1 | chr3:6042244-6042781 REVERSE LENGTH=107 64 2e-11
AT5G20230.1 | chr5:6826626-6827408 FORWARD LENGTH=197 63 4e-11
AT1G72230.1 | chr1:27188287-27189093 FORWARD LENGTH=182 60 3e-10
AT5G15350.1 | chr5:4985184-4986154 REVERSE LENGTH=173 59 5e-10
AT3G53330.1 | chr3:19772930-19773938 FORWARD LENGTH=311 57 4e-09
AT1G22480.1 | chr1:7934232-7935054 REVERSE LENGTH=175 54 3e-08
AT2G25060.1 | chr2:10662308-10662930 FORWARD LENGTH=183 54 3e-08
AT1G64640.1 | chr1:24022482-24023151 REVERSE LENGTH=192 54 3e-08
AT3G20570.1 | chr3:7186754-7187453 REVERSE LENGTH=204 52 1e-07
AT4G12880.1 | chr4:7544572-7545226 REVERSE LENGTH=142 51 2e-07
AT4G30590.1 | chr4:14935760-14936469 REVERSE LENGTH=191 50 4e-07
AT4G01380.1 | chr4:569148-570076 REVERSE LENGTH=211 50 4e-07
AT5G53870.1 | chr5:21870033-21871228 REVERSE LENGTH=371 49 5e-07
AT5G57920.1 | chr5:23453634-23454256 FORWARD LENGTH=183 48 1e-06
AT4G31840.1 | chr4:15401798-15402426 FORWARD LENGTH=178 45 8e-06
>AT2G02850.1 | chr2:826630-827720 REVERSE LENGTH=130
Length = 129
Score = 107 bits (267), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 3 ARGRGSACNXXXXXXXXXXXXXXXXXXMSAAPLAEAARYTVGDSSGWRFYAEGWAKGKTF 62
A+GRGSA + A +AA YTVGDS W F A GW KGK F
Sbjct: 2 AKGRGSA----SWSARAIVTLMAVSVLLLQADYVQAATYTVGDSGIWTFNAVGWPKGKHF 57
Query: 63 RAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVRKMRSGRDKVTLRKGTHYFICTEPGH 122
RAGDVL F YN Y +C P G + SG+D++TL KG ++FIC P H
Sbjct: 58 RAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNH 117
Query: 123 CKAGMKLAVRAI 134
C++ MK+AV A+
Sbjct: 118 CESDMKIAVTAV 129
>AT5G26330.1 | chr5:9241614-9242635 REVERSE LENGTH=188
Length = 187
Score = 86.7 bits (213), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 35 LAEAARYTVGDSSGWRFYAEG----WAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSC 90
L+EAA Y VGDS+GW A WA KTF GD + F+YN YRSC
Sbjct: 18 LSEAAVYKVGDSAGWTTIANVDYKLWASTKTFHIGDTVLFEYNPQFHNVMRVTHPMYRSC 77
Query: 91 TVPKGVRKMRSGRDKVTL-RKGTHYFICTEPGHCKAGMKLAVRAI 134
K + +G D +TL G H+F C PGHC AG KL + +
Sbjct: 78 NTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHVL 122
>AT3G60270.1 | chr3:22278029-22278762 REVERSE LENGTH=188
Length = 187
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 34 PLAEAARYTVGDSSGWRFYAE--GWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCT 91
P A + VGD+ GW E W KTFR GD LEFKY Y C
Sbjct: 19 PAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPSHSVAVVNKAD-YDGCE 77
Query: 92 VPKGVRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRAI 134
+ + G K+ L K G +F+C PGHC GMKLAV+ +
Sbjct: 78 TSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVL 121
>AT3G27200.1 | chr3:10043738-10044340 REVERSE LENGTH=175
Length = 174
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 36 AEAARYTVGDSSGWRFYAE--GWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVP 93
A AAR+ +G S GW + W+ ++F+ GD + FKY+ Y+SC +
Sbjct: 21 ALAARHVIGGSQGWEQSVDFDSWSSDQSFKVGDQIVFKYSELHSVVELGSETAYKSCDLG 80
Query: 94 KGVRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRAI 134
V + SG D V L K GT YF C GHC+ GMK+ V +
Sbjct: 81 TSVNSLSSGNDVVKLSKTGTRYFACGTVGHCEQGMKIKVNVV 122
>AT1G17800.1 | chr1:6128828-6129391 FORWARD LENGTH=141
Length = 140
Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 41 YTVGDSSGWRFYA--EGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVRK 98
Y VG GW + WA+GKTF AGD+LEFKY+ Y +C G +
Sbjct: 41 YIVGGDDGWDPVVPMDTWARGKTFYAGDILEFKYDYQRFNLIVVNRTGYETCEANVGAIE 100
Query: 99 MRSGRDKVTLRKGTHYFICT-EPGHCKAGMKLAVRAI 134
SG DK+ L G +YFI T P C G+K+A++A+
Sbjct: 101 YSSGDDKIQLNYGYNYFIGTYTPEDCTTGLKMAIKAL 137
>AT2G44790.1 | chr2:18462182-18463232 REVERSE LENGTH=203
Length = 202
Score = 72.8 bits (177), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 33 APLAEAARYTVGDSSGWRFYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTV 92
P A A YT+ ++G + GWA GKTFR GD+LEFKY Y C
Sbjct: 24 VPGAVAVTYTIEWTTGVDY--SGWATGKTFRVGDILEFKYG-SSHTVDVVDKAGYDGCDA 80
Query: 93 PKGVRKMRSGRDKVTLRK-GTHYFICTEPGHCKA--GMKLAVRAI 134
G K+ L+ G +YFIC+ PGHC+ GMKLAV +
Sbjct: 81 SSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVV 125
>AT2G31050.1 | chr2:13212150-13212752 FORWARD LENGTH=201
Length = 200
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 41 YTVGDSSGWRFYA---EGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVR 97
+ VGDS GW + E WA TF+ GD L FKYN Y C K +
Sbjct: 29 HKVGDSDGWTIMSVNYETWASTITFQVGDSLVFKYNKDFHDVTEVTHNDYEMCEPSKPLA 88
Query: 98 KMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRAI 134
+ +G D V L K G +FIC PGHC G KL + +
Sbjct: 89 RYETGSDIVILTKPGLQHFICGFPGHCDMGQKLQIHVL 126
>AT2G26720.1 | chr2:11384782-11385402 FORWARD LENGTH=207
Length = 206
Score = 70.1 bits (170), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 41 YTVGDSSGWRFYA---EGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVR 97
+ VG++ GW E WA + F+ GD L F YN + C K +R
Sbjct: 29 HKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMCESSKPLR 88
Query: 98 KMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRAI 134
+ ++G D ++L K G +FIC PGHCK G KL + +
Sbjct: 89 RYKTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVL 126
>AT3G60280.1 | chr3:22279867-22280633 REVERSE LENGTH=223
Length = 222
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 33 APLAEAARYTVGDSSGWRFYAE--GWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSC 90
P AA + VGD SGW + W GKTFR GD LEF Y Y +C
Sbjct: 16 VPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSHSVSVVDKAG-YDNC 74
Query: 91 TVPKGVRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRAI 134
+ G K+ L GT +F+C GHCK GMKLAV +
Sbjct: 75 DSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVL 119
>AT2G32300.1 | chr2:13722510-13723464 FORWARD LENGTH=262
Length = 261
Score = 67.8 bits (164), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 35 LAEAARYTVGDSSGWRFYAE--GWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTV 92
L A +T+G SGW A WA G+TF GD L F Y + SC
Sbjct: 20 LTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDVVEVTKPEFDSCQA 79
Query: 93 PKGVRKMRSGRDKVTLR-KGTHYFICTEPGHCKAGMKLAVRAI 134
K + +G V L G YFIC PGHC GMKL V +
Sbjct: 80 VKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVV 122
>AT5G07475.1 | chr5:2364827-2365536 REVERSE LENGTH=193
Length = 192
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 37 EAARYTVGDSSGWRFYA--EGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPK 94
A Y VGDSSGW + E W GK F GDVL F+Y+ Y++C
Sbjct: 26 NATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYS-STHSVYEVAKDNYQNCNTTD 84
Query: 95 GVRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRA 133
+R +G V L K G +F+C HC AGM+L V
Sbjct: 85 AIRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNV 124
>AT1G45063.1 | chr1:17033335-17034886 REVERSE LENGTH=370
Length = 369
Score = 65.1 bits (157), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 41 YTVGDSSGWRFYAE----GWAKGKTFRAGDVLEFKYNXXXXXXXXXX-XXXYRSCTVPKG 95
Y VGDS W Y W+K K F GD L F+YN + +C
Sbjct: 149 YKVGDSKSWGVYDSDFYYNWSKEKQFNVGDGLLFEYNNEVNGVYEISGDLEFLNCDPTSP 208
Query: 96 VRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAV 131
+ ++G D + L K G HYFI +EPGHC AG+KL V
Sbjct: 209 IAVHKTGHDIIKLTKPGIHYFISSEPGHCGAGLKLQV 245
>AT3G17675.1 | chr3:6042244-6042781 REVERSE LENGTH=107
Length = 106
Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 36 AEAARYTVGDSSGWRFYAE--GWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVP 93
+E + VGDS+GW + W +G+ F GDVL F Y Y C +
Sbjct: 4 SEGTEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLD 63
Query: 94 KGVRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRA 133
G D + L + G +FIC HC G KL++
Sbjct: 64 NYTTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104
>AT5G20230.1 | chr5:6826626-6827408 FORWARD LENGTH=197
Length = 196
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 41 YTVGDSSGW------RFYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPK 94
Y VGD + W FY WA GKTFR GD LEF + + +C K
Sbjct: 25 YDVGDDTEWTRPMDPEFYTT-WATGKTFRVGDELEFDFAAGRHDVAVVSEAAFENCEKEK 83
Query: 95 GVRKMRSGRDKVTLR-KGTHYFICTEPGHCKAGMKLAVRAI 134
+ M K+ L G YFICT HC+ G KL++ +
Sbjct: 84 PISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 124
>AT1G72230.1 | chr1:27188287-27189093 FORWARD LENGTH=182
Length = 181
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 56 WAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVRKMRSGRDKVTLR-KGTHY 114
A GK+F GD + F Y Y+SCT+ + SG + L+ G HY
Sbjct: 40 LATGKSFAVGDTIVFNYGAGHTVDEVSESD-YKSCTLGNAISSDSSGTTSIALKTPGPHY 98
Query: 115 FICTEPGHCKAGMKLAV 131
FIC PGHC GMKL+V
Sbjct: 99 FICGIPGHCTGGMKLSV 115
>AT5G15350.1 | chr5:4985184-4986154 REVERSE LENGTH=173
Length = 172
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 30 MSAAPL--AEAARYTVGDSSGWR--FYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXX 85
+ AAP+ A +YTVG++ W WA+GK F GD L F ++
Sbjct: 16 LMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKT 75
Query: 86 XYRSCTVPKGVRKMR--SGRDKVTLRKGTHYFICTEPGHCKAGMKLAVRA 133
Y C +R +GRD VTL + HY++ G C GMKL+V+
Sbjct: 76 DYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKV 125
>AT3G53330.1 | chr3:19772930-19773938 FORWARD LENGTH=311
Length = 310
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Query: 41 YTVGDSSGWRFYAEG----WAKGKTFRAGDVLEFKYNXXXXXX-XXXXXXXYRSCTVPKG 95
Y VGD GW Y W++GK F D L F+YN +RSC
Sbjct: 188 YRVGDYGGWSVYYSYYYYKWSEGKQFHVEDTLFFQYNKELNDVREITDELEFRSCESTST 247
Query: 96 VRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAV 131
V ++G D + L K G HYF+ + G C+AG+KL V
Sbjct: 248 VAVYKTGHDLIKLTKPGVHYFVSLKTGLCQAGIKLRV 284
>AT1G22480.1 | chr1:7934232-7935054 REVERSE LENGTH=175
Length = 174
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 36 AEAARYTVGDSSGWRFYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKG 95
A +A TV S G + GKTF GD + F Y Y+SCT+
Sbjct: 18 ASSASLTVNWSLGTDY--TPLTTGKTFSVGDTIVFNYGAGHTVDEVSEND-YKSCTLGNS 74
Query: 96 VRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVR 132
+ SG + L G YFIC PGHC AGMKLAV
Sbjct: 75 ITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVT 112
>AT2G25060.1 | chr2:10662308-10662930 FORWARD LENGTH=183
Length = 182
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 35 LAEAARYTVGDSSG-WRFYAEG------WAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXY 87
LA A TVG SG W+ WA+ F+ GD + F+Y Y
Sbjct: 25 LAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSVLEVTKEAY 84
Query: 88 RSCTVPKGVRKMRSGRDKVTL-RKGTHYFICTEPGHCKAGMKLAVRAI 134
SC + G KV L R G YFI GHC+ G KL++ I
Sbjct: 85 NSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVI 132
>AT1G64640.1 | chr1:24022482-24023151 REVERSE LENGTH=192
Length = 191
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 40/105 (38%), Gaps = 8/105 (7%)
Query: 36 AEAARYTVGDSSGW------RFYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRS 89
+ Y VGD W + Y++ W K +F+ GD L F Y ++S
Sbjct: 28 VSSTLYKVGDLDAWGIPIDAKVYSK-WPKSHSFKIGDSLLFLYPPSEDSLIQVTPSNFKS 86
Query: 90 CTVPKGVRKMRSGRDKVTL-RKGTHYFICTEPGHCKAGMKLAVRA 133
C + M G L + GT YF PGHC KL V
Sbjct: 87 CNTKDPILYMNDGNSLFNLTQNGTLYFTSANPGHCTKYQKLLVSV 131
>AT3G20570.1 | chr3:7186754-7187453 REVERSE LENGTH=204
Length = 203
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 8/103 (7%)
Query: 36 AEAARYTVGDSSGW------RFYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRS 89
A A +TVG ++GW + Y++ WA+ F+ GD L F Y Y S
Sbjct: 25 AYAREFTVGGATGWTVPSGSQVYSQ-WAEQSRFQIGDSLLFVYQSNQDSVLQVTRDAYDS 83
Query: 90 CTVPKGVRKMRSGRDKVTLR-KGTHYFICTEPGHCKAGMKLAV 131
C K G+ VTL G +YFI +CK KL V
Sbjct: 84 CNTDSPTAKFADGKTSVTLNHSGPYYFISGNKDNCKKNEKLVV 126
>AT4G12880.1 | chr4:7544572-7545226 REVERSE LENGTH=142
Length = 141
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 30 MSAAPLAE--AARYTVGDSSGWR--FYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXX 85
+ AAP+ E A +Y VGD W WA+GK F GD L F +
Sbjct: 16 LVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNILEVNKA 75
Query: 86 XYRSCTVPKGVRKMR--SGRDKVTLRKGTHYFICTEPGHCKAGMKLAV 131
Y C + +R +GRD V L + Y++ G C GMKL V
Sbjct: 76 DYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDV 123
>AT4G30590.1 | chr4:14935760-14936469 REVERSE LENGTH=191
Length = 190
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Query: 56 WAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVRKMRSGRDKVTLRK-GTHY 114
WA+ F+ GD + +KY+ Y SC +++ G KV L K G ++
Sbjct: 50 WAENNRFKVGDFIVWKYDMKVDSVLQVTKEDYESCNTANPLKQYNDGNTKVALDKSGPYF 109
Query: 115 FICTEPGHCKAGMKLAVRAI 134
FI PG+C G K+ + +
Sbjct: 110 FISGAPGNCAKGEKITLVVL 129
>AT4G01380.1 | chr4:569148-570076 REVERSE LENGTH=211
Length = 210
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 46 SSGWRFYAEG-----WAKGKTFRAGDVLEFKY-NXXXXXXXXXXXXXYRSCTVPKGVRKM 99
S GW E W++ F GD L F+Y N + SC V
Sbjct: 77 SKGWSVPQESYFYYRWSEKTQFPIGDSLLFEYDNEVNDVLEISGDLEFISCYPISPVAVH 136
Query: 100 RSGRDKVTLRK-GTHYFICTE-PGHCKAGMKLAV 131
+G D VTL + G HYFI ++ PGHC AG+KL V
Sbjct: 137 MTGHDLVTLTEPGVHYFISSKTPGHCYAGLKLRV 170
>AT5G53870.1 | chr5:21870033-21871228 REVERSE LENGTH=371
Length = 370
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 35 LAEAARYTVGDSSGWRFYAE----GWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSC 90
+A+A R+ VG + W + WA+ F+ D L FKY + C
Sbjct: 24 VADAWRFNVGGNGAWVTNPQENYNTWAERNRFQVNDSLYFKYAKGSDSVQQVMKADFDGC 83
Query: 91 TVPKGVRKMRSGRDKVTL-RKGTHYFICTEPGHCKAGMKLAV 131
V ++ +G VTL R G YFI HC+ G KL V
Sbjct: 84 NVRNPIKNFENGESVVTLDRSGAFYFISGNQDHCQKGQKLIV 125
>AT5G57920.1 | chr5:23453634-23454256 FORWARD LENGTH=183
Length = 182
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 56 WAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYRSCTVPKGVRKMRSGRDKVTL-RKGTHY 114
W+ F+ GD L +KYN Y C + +R + G + L R G Y
Sbjct: 45 WSGRTRFKIGDSLLWKYNAENDSVLQVRQTDYERCDRSEPIRGYKDGHTNIELKRSGPFY 104
Query: 115 FICTEPGHCKAGMKLAV 131
FI E GHC+ G KL V
Sbjct: 105 FISGEEGHCQRGEKLRV 121
>AT4G31840.1 | chr4:15401798-15402426 FORWARD LENGTH=178
Length = 177
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 36 AEAARYTVGDSSG-WR------FYAEGWAKGKTFRAGDVLEFKYNXXXXXXXXXXXXXYR 88
A TVG SG W+ F WA+ F+ GD + FKY Y
Sbjct: 22 VNANEVTVGGKSGDWKIPPSSSFSFNEWAQKARFKVGDFIVFKYEAGKDSVLQVTREAYE 81
Query: 89 SCTVPKGVRKMRSGRDKVTLRK-GTHYFICTEPGHCKAGMKLAVRAI 134
C G KV L + G YF+ GHC+ G KL + I
Sbjct: 82 KCNTTSPKASYTDGNTKVKLDQAGPVYFVSGTEGHCQKGQKLRLVVI 128
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.134 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,075,988
Number of extensions: 56312
Number of successful extensions: 162
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 142
Number of HSP's successfully gapped: 27
Length of query: 134
Length of database: 11,106,569
Length adjustment: 88
Effective length of query: 46
Effective length of database: 8,693,961
Effective search space: 399922206
Effective search space used: 399922206
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 106 (45.4 bits)