BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0732500 Os02g0732500|AK111722
(184 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0732500 Similar to ADP-ribosylation factor-like protein 376 e-105
Os03g0200800 ADP-ribosylation factor family protein 312 1e-85
Os07g0620400 Similar to GTP-binding protein-like 119 1e-27
AK062677 112 1e-25
Os03g0392300 Similar to GTP-binding protein-like 112 1e-25
Os03g0811900 Similar to ADP-ribosylation factor 108 3e-24
Os01g0265100 Similar to ADP-ribosylation factor 108 3e-24
Os07g0223400 Similar to ADP-ribosylation factor 1 108 3e-24
Os08g0248900 Similar to ADP-ribosylation factor 3 107 4e-24
Os01g0813400 Similar to ADP-ribosylation factor 1 107 7e-24
Os05g0489600 Similar to ADP-ribosylation factor 1 106 8e-24
Os11g0586900 Similar to ADP-ribosylation factor-like protein 5 103 6e-23
Os06g0114200 102 2e-22
Os02g0128600 Similar to ADP-ribosylation factor-like protein 96 2e-20
Os10g0580200 Similar to ADP-ribosylation factor-like protein 95 3e-20
Os01g0338000 Similar to GTP-binding protein SAR1A 95 3e-20
Os02g0327100 Similar to ARL2 G-protein 93 1e-19
Os01g0254000 Similar to NTGB2 (Fragment) 89 2e-18
Os12g0560300 Similar to NTGB2 (Fragment) 87 5e-18
Os06g0225000 Similar to NTGB3 (Fragment) 74 8e-14
Os01g0558600 Ras-related protein RIC1 72 3e-13
AK062838 70 1e-12
AK060839 69 1e-12
Os02g0653800 Similar to GTP-binding protein 65 2e-11
Os01g0179700 Similar to GTP-binding protein YPTM2 65 2e-11
Os03g0819900 Similar to RAB8C 64 5e-11
Os07g0239400 Similar to Ethylene-responsive small GTP-bindi... 64 7e-11
>Os02g0732500 Similar to ADP-ribosylation factor-like protein
Length = 184
Score = 376 bits (965), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/184 (100%), Positives = 184/184 (100%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT
Sbjct: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA
Sbjct: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLIKHS 180
GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLIKHS
Sbjct: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLIKHS 180
Query: 181 RTAK 184
RTAK
Sbjct: 181 RTAK 184
>Os03g0200800 ADP-ribosylation factor family protein
Length = 184
Score = 312 bits (799), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 143/181 (79%), Positives = 162/181 (89%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MG W++ LNWLRSLFFKQEMELSL+GLQNAGKTSLVN +ATGG+SEDMIPTVGFNMRKVT
Sbjct: 1 MGFWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGFSEDMIPTVGFNMRKVT 60
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
KGNVTIKLWDLGGQ RFR+MWERYCR VSAI+YVVDAADR+++ IAKSELHDLL+K SL
Sbjct: 61 KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADRENMAIAKSELHDLLSKPSLT 120
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLIKHS 180
GIPLLV+GNKIDK EA KQ+ D +GL+ I DREV C+MISCK+S NID VIDWL+KHS
Sbjct: 121 GIPLLVIGNKIDKPEAFPKQSFTDVMGLKTITDREVACFMISCKNSTNIDSVIDWLVKHS 180
Query: 181 R 181
+
Sbjct: 181 K 181
>Os07g0620400 Similar to GTP-binding protein-like
Length = 203
Score = 119 bits (298), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 13/189 (6%)
Query: 2 GLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVAT------GGYSEDMIPTVGFN 55
GLW + +F K E + ++G+ AGKT+L+ V + G + ++PTVG N
Sbjct: 7 GLW-------QHVFSKAEFHVVILGVHKAGKTTLLEKVKSIYLKEEGLPHDRIVPTVGLN 59
Query: 56 MRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLT 115
+ ++ NV + WDLGGQ RT+WE+Y A++YV+D+A S AKS L +L
Sbjct: 60 IGRIEDANVKLVFWDLGGQPGLRTIWEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLH 119
Query: 116 KQSLAGIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDW 175
+ L G+PLL+ NK + AV+++ L L L+ + +R S D I IDW
Sbjct: 120 HEDLQGVPLLIFANKQELPAAVTEEELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDW 179
Query: 176 LIKHSRTAK 184
L++ +K
Sbjct: 180 LVEEMERSK 188
>AK062677
Length = 181
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 11 LRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWD 70
LF KQEM + +VGL AGKT+++ + G IPT+GFN+ V N++ +WD
Sbjct: 9 FERLFGKQEMRILMVGLDAAGKTTILYKLKLGEVVT-TIPTIGFNVETVEYKNISFTVWD 67
Query: 71 LGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNK 130
+GGQ + R +W Y + +++VVD+ DRD + A+ ELH +L + L LLV NK
Sbjct: 68 VGGQDKIRPLWRHYYQNTQGLIFVVDSNDRDRVDAARDELHRMLNEDELRDSILLVFANK 127
Query: 131 IDKSEAVSKQALVDQLGLELIKDR----EVCC 158
D A+S + D+LGL ++ R + CC
Sbjct: 128 QDLPNAMSAAEMTDKLGLHGLRHRQWFIQACC 159
>Os03g0392300 Similar to GTP-binding protein-like
Length = 203
Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 13/189 (6%)
Query: 2 GLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVAT------GGYSEDMIPTVGFN 55
GLW + N K E + ++G+ AGKT+L+ + + G + ++PTVG N
Sbjct: 7 GLWKYIFN-------KTEFHVLILGVDKAGKTTLLEKIKSIYLKGEGLTPDRIVPTVGLN 59
Query: 56 MRKVTKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLT 115
+ ++ N + WDLGGQ RT+WE+Y + AI+YV+DAA S AKS L +L
Sbjct: 60 IGRIEDANAKLVFWDLGGQVGLRTIWEKYYQEAHAIIYVIDAAAASSFEDAKSALEKVLR 119
Query: 116 KQSLAGIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDW 175
+ L G PLL+ NK D ++ + L L L+ + +R +S D I IDW
Sbjct: 120 HEDLKGAPLLIFANKQDLPGVITDEELARYLQLKELDERPYKFQAVSAYDGRGIKSGIDW 179
Query: 176 LIKHSRTAK 184
+++ +K
Sbjct: 180 VVEQMERSK 188
>Os03g0811900 Similar to ADP-ribosylation factor
Length = 181
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MGL + LF K+EM + +VGL AGKT+++ + G IPT+GFN+ V
Sbjct: 1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVE 57
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
N++ +WD+GGQ + R +W Y + +++VVD+ DRD + A+ ELH +L + L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWL 176
LLV NK D A++ + D+LGL ++ R + +DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWL 173
>Os01g0265100 Similar to ADP-ribosylation factor
Length = 181
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MGL + LF K+EM + +VGL AGKT+++ + G IPT+GFN+ V
Sbjct: 1 MGL--TFTKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVE 57
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
N++ +WD+GGQ + R +W Y + +++VVD+ DRD + A+ ELH +L + L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR 117
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWL 176
LLV NK D A++ + D+LGL ++ R + +DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWL 173
>Os07g0223400 Similar to ADP-ribosylation factor 1
Length = 181
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 88/163 (53%), Gaps = 1/163 (0%)
Query: 14 LFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGG 73
LF K+EM + +VGL AGKT+++ + G IPT+GFN+ V N++ +WD+GG
Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVEYKNISFTVWDVGG 70
Query: 74 QRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDK 133
Q + R +W Y + +++VVD+ DRD + A+ ELH +L + L LLV NK D
Sbjct: 71 QDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 130
Query: 134 SEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWL 176
A++ + D+LGL ++ R + +DWL
Sbjct: 131 PNAMNAAEITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWL 173
>Os08g0248900 Similar to ADP-ribosylation factor 3
Length = 182
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
Query: 11 LRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWD 70
S+F +E + ++GL NAGKT+++ + G IPT+GFN+ V N+ ++WD
Sbjct: 9 FSSVFGNREARILVLGLDNAGKTTILYRLQMGEVV-STIPTIGFNVETVQYNNIKFQVWD 67
Query: 71 LGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNK 130
LGGQ R W Y AI+YVVD++D D + AK E H +L + L G +LV NK
Sbjct: 68 LGGQTSIRPYWRCYFPNTQAIIYVVDSSDTDRLVTAKEEFHAILEEDELKGAVVLVYANK 127
Query: 131 IDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWL 176
D A+ A+ + L L IK R+ + S + +DWL
Sbjct: 128 QDLPGALDDAAITESLELHKIKSRQWAIFKTSAIKGEGLFEGLDWL 173
>Os01g0813400 Similar to ADP-ribosylation factor 1
Length = 181
Score = 107 bits (266), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MGL + LF K+EM + +VGL AGKT+++ + G IPT+GFN+ V
Sbjct: 1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVE 57
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
N++ +WD+GGQ + R +W Y + +++VVD+ DR+ + A+ ELH +L + L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELR 117
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWL 176
LLV NK D A++ + D+LGL ++ R + +DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
>Os05g0489600 Similar to ADP-ribosylation factor 1
Length = 181
Score = 106 bits (265), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 92/176 (52%), Gaps = 3/176 (1%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MGL + LF K+EM + +VGL AGKT+++ + G IPT+GFN+ V
Sbjct: 1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVE 57
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
N++ +WD+GGQ + R +W Y + +++VVD+ DR+ + A+ ELH +L + L
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELR 117
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWL 176
LLV NK D A++ + D+LGL ++ R + +DWL
Sbjct: 118 DAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWL 173
>Os11g0586900 Similar to ADP-ribosylation factor-like protein 5
Length = 184
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 3/155 (1%)
Query: 1 MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVT 60
MG W S + +L +F +E ++ +VGL NAGKT+ + + G + PT+G N+ +V
Sbjct: 1 MGAWMSRVWFL--MFPAKEYKIVVVGLDNAGKTTTLYKLHLG-EAVTAAPTIGSNVEEVV 57
Query: 61 KGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLA 120
N+ ++WDLGGQ RT W Y RG A++ V+D+ DR I I K EL LL L
Sbjct: 58 FKNIRFEVWDLGGQESLRTSWATYYRGTHAVIVVIDSTDRARINIIKDELFRLLQHGDLE 117
Query: 121 GIPLLVLGNKIDKSEAVSKQALVDQLGLELIKDRE 155
G +LV NK D +A+S + D L L IK+ +
Sbjct: 118 GAVVLVFANKQDLKDAMSPAEITDALSLHSIKNHD 152
>Os06g0114200
Length = 189
Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 90/163 (55%), Gaps = 2/163 (1%)
Query: 15 FFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQ 74
F +EM++ ++GL AGKT+++ + G IPT+GFN+ KV NV +WD+GGQ
Sbjct: 12 FCTKEMKVLMLGLDAAGKTTILYRLHIGEVLSS-IPTIGFNVEKVEYKNVAFTVWDVGGQ 70
Query: 75 RRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKS 134
+ R +W +Y R A++YVVD+ DR+ I +AK E ++ + +L+L NK D
Sbjct: 71 DKLRPLWRQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLMLNSVILLLANKQDLK 130
Query: 135 EAVSKQALVDQLG-LELIKDREVCCYMISCKDSVNIDVVIDWL 176
A+S + +LG E +K+R C S + +DWL
Sbjct: 131 GAMSSSEVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWL 173
>Os02g0128600 Similar to ADP-ribosylation factor-like protein
Length = 194
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 13 SLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLG 72
+ F +EM + ++GL AGKT+++ + G +PTVGFN+ KV NV +WD+G
Sbjct: 11 AFFSTREMRVVMLGLDAAGKTTILYRLHMGEVLS-TVPTVGFNVEKVQYKNVVFTVWDVG 69
Query: 73 GQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKID 132
GQ + R +W+ Y A++YVVD+ DR+ I A+ E ++ +A +LV NK D
Sbjct: 70 GQEKLRPLWKMYLSNSDALIYVVDSLDRERIIDARQEFQTIIKDPLMANSIILVFANKQD 129
Query: 133 KSEAVSKQALVDQLGLELIKDR 154
A+S + + LGL +++R
Sbjct: 130 LRGAMSPDEVSEGLGLHDLRNR 151
>Os10g0580200 Similar to ADP-ribosylation factor-like protein
Length = 192
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 13 SLFFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLG 72
+ F +EM + ++GL AGKT+++ + G +PT+GFN+ KV NV +WD+G
Sbjct: 11 AFFGNKEMRVVMLGLDAAGKTTILYKLHIGEVLS-TVPTIGFNVEKVQYKNVVFTVWDVG 69
Query: 73 GQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKID 132
GQ + R +W Y A++YVVD+ DR+ I A++E ++ + LLV NK D
Sbjct: 70 GQEKLRPLWRHYFNNTDALIYVVDSLDRERIGRARAEFQAIINDPFMLNSVLLVFANKQD 129
Query: 133 KSEAVSKQALVDQLGLELIKDR 154
A++ + + LGL + +R
Sbjct: 130 MRGAMTPMEVCEGLGLYDLNNR 151
>Os01g0338000 Similar to GTP-binding protein SAR1A
Length = 193
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Query: 1 MGLWDSLLNWLRSL-FFKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKV 59
M LWD L SL +++E ++ +GL NAGKT+L++ + + PT ++
Sbjct: 1 MFLWDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEEL 59
Query: 60 TKGNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSL 119
+ G + K +DLGG + R +W+ Y V A++Y+VDA D++ +K EL LL+ SL
Sbjct: 60 SIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSL 119
Query: 120 AGIPLLVLGNKIDKSEAVSKQALVDQLGL 148
A +P L+LGNKID A S++ L LGL
Sbjct: 120 AAVPFLILGNKIDIPYAASEEELRYHLGL 148
>Os02g0327100 Similar to ARL2 G-protein
Length = 185
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 97/178 (54%), Gaps = 11/178 (6%)
Query: 7 LLNWLRSLFFKQ-EMELSLVGLQNAGKTSLV---NAVATGGYSEDMIPTVGFNMRKVTKG 62
LL+ +R + K+ EM + +VGL N+GKT++V N TG S PT+GFN++ +
Sbjct: 3 LLSIIRKIKRKEKEMRILMVGLDNSGKTTIVLKINGEDTGVIS----PTLGFNIKTIKYH 58
Query: 63 NVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGI 122
++ +WD+GGQ+ R+ W Y +++VVD++D + ++ELH+LL ++ LAG
Sbjct: 59 KYSLNIWDIGGQKTIRSYWRNYFEQTDGLVWVVDSSDIRRLDDCRAELHNLLKEERLAGA 118
Query: 123 PLLVLGNKIDKSEAVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVV--IDWLIK 178
LLV NK D A+ + L LE + D ++ C ++ DWL++
Sbjct: 119 SLLVFANKQDIQGALKPSEIAKVLNLEAM-DGSRHWQIVGCSAHTGEGLLQGFDWLVQ 175
>Os01g0254000 Similar to NTGB2 (Fragment)
Length = 193
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Query: 17 KQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRR 76
++E ++ +GL NAGKT+L++ + + PT +++ G + K +DLGG +
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQYPTSEELSIGKIKFKAFDLGGHQI 76
Query: 77 FRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSEA 136
R +W+ Y V A++Y+VDAAD++ +K EL LL SLA +P L+LGNKID A
Sbjct: 77 ARRVWKDYYAKVDAVVYLVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYA 136
Query: 137 VSKQALVDQLGL 148
S++ L LGL
Sbjct: 137 ASEEELRYYLGL 148
>Os12g0560300 Similar to NTGB2 (Fragment)
Length = 193
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
Query: 17 KQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQRR 76
++E ++ +GL NAGKT+L++ + + PT +++ G + K +DLGG +
Sbjct: 18 QKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQYPTSEELSIGKIKFKAFDLGGHQI 76
Query: 77 FRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSEA 136
R +W+ Y V A++Y+VDA D++ +K EL LL+ SLA +P L+LGNKID A
Sbjct: 77 ARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDSLATVPFLILGNKIDIPYA 136
Query: 137 VSKQALVDQLGL 148
S++ L +GL
Sbjct: 137 ASEEELRYHMGL 148
>Os06g0225000 Similar to NTGB3 (Fragment)
Length = 194
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 83/147 (56%), Gaps = 6/147 (4%)
Query: 7 LLNWLRSLF-----FKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVGFNMRKVTK 61
LL+W + +++E ++ +GL NAGKT+L ++ + PT +++
Sbjct: 4 LLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENLAVHQ-PTQHPTSEELSI 62
Query: 62 GNVTIKLWDLGGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAG 121
G + K +DLGG R R +W Y V A++YVVDAADR +K EL LL+ +LAG
Sbjct: 63 GRIRFKAFDLGGHRIARRVWRDYYAQVDAVVYVVDAADRCRFAESKMELDALLSDDALAG 122
Query: 122 IPLLVLGNKIDKSEAVSKQALVDQLGL 148
+P LVLGNKID AV +Q L LGL
Sbjct: 123 VPFLVLGNKIDIPYAVPEQELCYYLGL 149
>Os01g0558600 Ras-related protein RIC1
Length = 202
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 20 MELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDLGGQR 75
+L L+G GK+ L+ A Y E I T+G F +R V + TIKL WD GQ
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 76 RFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSE 135
RFRT+ Y RG I+ V D D++S K L++ + + + + L++GNK D +E
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNE-IDRYASENVNKLLVGNKCDLAE 127
Query: 136 A-----VSKQALVDQLGLELIKDREVCCYMISCKDSVNID 170
+ +AL D++G+ ++ S KD+ N++
Sbjct: 128 NRVVSYEAGKALADEIGIPFLE--------TSAKDATNVE 159
>AK062838
Length = 201
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 20 MELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDLGGQR 75
+L L+G GK+ L+ A Y+E I T+G F +R + TIKL WD GQ
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68
Query: 76 RFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKID--K 133
RFRT+ Y RG I+ V D D++S K LH+ + + + + L++GNK D
Sbjct: 69 RFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHE-IDRYACENVNKLLVGNKSDLTA 127
Query: 134 SEAVSKQA---LVDQLGLELIKDREVCCYMISCKDSVNIDVVI 173
VS A + LG+E ++ S K++ N++
Sbjct: 128 KRVVSTDAAKEFAESLGIEFLE--------TSAKNAANVETAF 162
>AK060839
Length = 209
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 16 FKQEMELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDL 71
F +L L+G + GK+ + A Y + I T+G F +R + TIKL WD
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMDGKTIKLQIWDT 64
Query: 72 GGQRRFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKI 131
GQ RFRT+ Y RG I+ V D D +S K + + + K + + L++GNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKEWMSE-IDKYANDSVCKLLVGNKC 123
Query: 132 DKSEA-----VSKQALVDQLGLELIKDREVCCYMISCKDSVNID 170
D +E+ QA D++G+ ++ S KDS+N++
Sbjct: 124 DLAESRVVETAVAQAYADEIGIPFLE--------TSAKDSINVE 159
>Os02g0653800 Similar to GTP-binding protein
Length = 203
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 20 MELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDLGGQR 75
+L L+G GK+ L+ A Y + I T+G F +R V + TIKL WD GQ
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 76 RFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKID--K 133
RFRT+ Y RG I+ V D D++S K L++ + + + + L++GNK D
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNE-IDRYASDNVNKLLVGNKSDLTA 127
Query: 134 SEAVSKQ---ALVDQLGLELIKDREVCCYMISCKDSVNID 170
++ VS + A D++G+ ++ S K++ N++
Sbjct: 128 NKVVSSETAKAFADEMGIPFME--------TSAKNATNVE 159
>Os01g0179700 Similar to GTP-binding protein YPTM2
Length = 203
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 20 MELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDLGGQR 75
+L L+G GK+ L+ A Y + I T+G F +R V + TIKL WD GQ
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68
Query: 76 RFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKID--K 133
RFRT+ Y RG I+ V D D++S K L++ + + + + L++GNK D
Sbjct: 69 RFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNE-IDRYASDNVNKLLVGNKSDLTA 127
Query: 134 SEAVSKQ---ALVDQLGLELIKDREVCCYMISCKDSVNID 170
++ VS + A D++G+ ++ S K++ N++
Sbjct: 128 NKVVSSETAKAFADEMGIPFME--------TSAKNATNVE 159
>Os03g0819900 Similar to RAB8C
Length = 214
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 20 MELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDLGGQR 75
++L L+G GK+ L+ + G ++ I T+G F +R V IKL WD GQ
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQE 75
Query: 76 RFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSE 135
RFRT+ Y RG IL V D D S ++ + + + + + + +++GNK D E
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN-IEQHASDNVNKILVGNKADMDE 134
Query: 136 AVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVI 173
SK+A+ G L + + + S K ++N++ V
Sbjct: 135 --SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVF 170
>Os07g0239400 Similar to Ethylene-responsive small GTP-binding protein
Length = 215
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 20 MELSLVGLQNAGKTSLVNAVATGGYSEDMIPTVG--FNMRKVTKGNVTIKL--WDLGGQR 75
++L L+G GK+ L+ + G ++ I T+G F +R + IKL WD GQ
Sbjct: 16 IKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 75
Query: 76 RFRTMWERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSE 135
RFRT+ Y RG IL V D D S ++ + + + + + + +++GNK D E
Sbjct: 76 RFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRN-IEQHASDNVNKILVGNKADMDE 134
Query: 136 AVSKQALVDQLGLELIKDREVCCYMISCKDSVNIDVVI 173
SK+A+ G L + + + S K ++N++ V
Sbjct: 135 --SKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVF 170
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.136 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,742,372
Number of extensions: 211953
Number of successful extensions: 837
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 837
Number of HSP's successfully gapped: 28
Length of query: 184
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 89
Effective length of database: 12,075,471
Effective search space: 1074716919
Effective search space used: 1074716919
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)