Os10g0580200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADP-ribosylation factor-like protein.
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Os10g0580200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADP-ribosylation factor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.75 | 0.256 | 13.2 | -0.712 | 0.57 | -0.812 | 0.0275 | 1.94 | -0.242 | 6.37 | 23.71 | 1282 | -- | -- |
| 31.82 | 0.263 | 13.2 | -0.562 | 0.584 | -1.19 | -0.0716 | -- | -0.17 | 6.53 | 20.31 | 2381 | -- | -- |
| 29.74 | 0.254 | 13.2 | -0.707 | 0.568 | -0.808 | -- | 1.94 | -0.243 | 6.38 | 23.7 | 1257 | -- | -- |
| 31.83 | 0.263 | 13.2 | -0.566 | 0.578 | -1.21 | -- | -- | -0.173 | 6.52 | 20.29 | 2394 | -- | -- |
| 46.61 | 0.318 | 13.2 | -0.728 | -- | -0.863 | -- | 1.97 | -0.249 | -- | 23.87 | 1309 | -- | -- |
| 47.91 | 0.325 | 13.1 | -0.108 | 0.594 | -- | -0.165 | -- | 0.00754 | 6.06 | -- | -- | -- | -- |
| 47.98 | 0.324 | 13.1 | -0.109 | 0.593 | -- | -- | -- | 0.00821 | 6.09 | -- | -- | -- | -- |
| 47.98 | 0.323 | 13.2 | -0.598 | -- | -1.37 | -- | -- | -0.172 | -- | 19.95 | 2735 | -- | -- |
| 37.22 | 0.284 | 13.2 | -- | 0.572 | -0.898 | -- | -- | -0.0823 | 6.35 | 22.9 | 1239 | -- | -- |
| 66.2 | 0.38 | 13.2 | -0.0924 | -- | -- | -- | -- | 0.0215 | -- | -- | -- | -- | -- |
| 48.3 | 0.325 | 13.1 | -- | 0.591 | -- | -- | -- | 0.0204 | 6.1 | -- | -- | -- | -- |
| 53.98 | 0.342 | 13.2 | -- | -- | -0.979 | -- | -- | -0.0963 | -- | 22.9 | 1319 | -- | -- |
| 66.43 | 0.38 | 13.2 | -- | -- | -- | -- | -- | 0.0318 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 8 |
| 4 | 27.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 13 |
| 12 | 27.62 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 47 | 27.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 15 |
| 56 | 27.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 15 |
| 98 | 28.16 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 151 | 28.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 237 | 29.17 | humidity | 90.0 | 14400 | > th | dose dependent | no | NA | NA |
| 258 | 29.52 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 18 | 17 |
| 263 | 29.55 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 280 | 29.63 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 295 | 29.67 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 317 | 29.74 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 368 | 29.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 381 | 29.93 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 399 | 29.97 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 403 | 29.98 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 408 | 29.99 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 432 | 30.07 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 433 | 30.07 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 439 | 30.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 440 | 30.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 443 | 30.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 446 | 30.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 466 | 30.16 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 474 | 30.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 475 | 30.18 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 501 | 30.21 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 503 | 30.22 | radiation | 30.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 506 | 30.23 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 515 | 30.24 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 564 | 30.33 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 573 | 30.34 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |
| 577 | 30.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 583 | 30.36 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 586 | 30.36 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 593 | 30.36 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 23 |
| 607 | 30.37 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 618 | 30.39 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 639 | 30.41 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 650 | 30.41 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 666 | 30.43 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 667 | 30.43 | atmosphere | 995.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 681 | 30.44 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 2 | 11 |
| 696 | 30.45 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 697 | 30.45 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 700 | 30.45 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 715 | 30.46 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 742 | 30.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 743 | 30.48 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 3 | 9 |
| 744 | 30.48 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 756 | 30.49 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 766 | 30.50 | wind | 9.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 798 | 30.52 | temperature | 10.0 | 1440 | > th | dose dependent | sin | 11 | NA |
| 801 | 30.52 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 813 | 30.53 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 4 | 7 |
| 833 | 30.54 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 851 | 30.55 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 889 | 30.57 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 902 | 30.58 | wind | 7.0 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 918 | 30.59 | wind | 7.0 | 43200 | < th | dose independent | rect. | 21 | 4 |
| 936 | 30.60 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 973 | 30.62 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 974 | 30.62 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 992 | 30.63 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 7 | 8 |
| 994 | 30.63 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 7 | 2 |