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Os03g0200800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : ADP-ribosylation factor family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.06 (0.0189) R2 : 0.588
β1 : -0.804 (0.0692) R2dD : 0.127 R2D : 0.113
β2 : 1.12 (0.0489) R2dC : 0.474 R2C : 0.464
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0918 (0.0403) R2dN8 : 0.00628 R2N8 : -0.0093
σ : 0.355
deviance : 57.54
__
_____
C
peak time of C : 7.18
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.28 0.336 8.11 -1.09 1.12 0.237 -0.621 -0.953 -0.203 7.25 20.06 1043 -- --
52.55 0.338 8.08 -0.969 1.13 0.54 -0.588 -- -0.162 7.27 18.6 924 -- --
52.24 0.337 8.1 -1.1 1.12 0.236 -- -0.933 -0.202 7.27 20.1 1154 -- --
53.49 0.341 8.08 -0.982 1.13 0.548 -- -- -0.167 7.37 18.6 957 -- --
117.09 0.504 8.14 -1.13 -- 0.285 -- -1.09 -0.204 -- 20.19 1399 -- --
56.66 0.353 8.06 -0.793 1.12 -- -0.589 -- -0.0936 7.1 -- -- -- --
57.54 0.355 8.06 -0.804 1.12 -- -- -- -0.0918 7.18 -- -- -- --
118.61 0.507 8.13 -1.03 -- 0.774 -- -- -0.181 -- 18.47 1337 -- --
73.18 0.398 8.04 -- 1.18 0.304 -- -- 0.0185 7.16 32.21 376 -- --
123.32 0.519 8.09 -0.784 -- -- -- -- -0.0723 -- -- -- -- --
74.59 0.404 8.04 -- 1.11 -- -- -- -0.00223 7.23 -- -- -- --
139.26 0.55 8.06 -- -- 0.0695 -- -- 0.0303 -- 32.6 1403 -- --
139.52 0.551 8.07 -- -- -- -- -- 0.0146 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.13 radiation 40.0 14400 < th dose dependent rect. 23 6
2 47.39 radiation 10.0 4320 < th dose independent rect. 23 6
8 47.92 atmosphere 1005.0 10 > th dose dependent rect. 4 5
19 48.19 radiation 40.0 14400 < th dose dependent rect. 19 10
25 48.41 wind 5.0 4320 > th dose independent rect. 18 1
26 48.42 wind 5.0 4320 < th dose independent rect. 18 1
27 48.42 radiation 10.0 4320 < th dose independent rect. 19 10
33 48.80 radiation 10.0 30 < th dose dependent sin 12 NA
49 48.99 humidity 50.0 90 > th dose independent rect. 9 18
54 49.03 temperature 10.0 90 > th dose dependent rect. 4 18
68 49.16 atmosphere 995.0 90 > th dose dependent rect. 17 11
69 49.17 wind 7.0 4320 < th dose independent rect. 15 1
72 49.20 wind 3.0 4320 > th dose dependent rect. 18 1
73 49.20 atmosphere 995.0 90 > th dose dependent rect. 9 19
74 49.21 temperature 25.0 270 < th dose independent rect. 3 3
77 49.22 wind 7.0 4320 > th dose independent rect. 15 1
80 49.24 radiation 30.0 90 < th dose independent rect. 3 6
83 49.28 atmosphere 1005.0 270 > th dose dependent rect. 4 2
86 49.30 radiation 1.0 10 > th dose independent rect. 9 7
87 49.30 radiation 30.0 90 < th dose independent rect. 15 18
92 49.33 humidity 60.0 14400 > th dose independent rect. 20 9
105 49.39 humidity 50.0 270 > th dose independent rect. 6 21
107 49.40 atmosphere 1005.0 90 > th dose independent rect. 9 18
123 49.49 temperature 30.0 270 < th dose independent rect. 7 20
128 49.52 radiation 40.0 90 < th dose independent rect. 13 20
133 49.56 humidity 50.0 30 > th dose independent rect. 9 7
146 49.61 humidity 80.0 14400 > th dose independent rect. 17 5
160 49.66 wind 9.0 30 < th dose independent rect. 16 17
163 49.67 humidity 80.0 14400 > th dose independent rect. 18 3
164 49.67 radiation 1.0 30 > th dose independent rect. 16 17
174 49.69 precipitation 0.1 30 < th dose independent rect. 16 17
176 49.69 wind 9.0 4320 < th dose dependent rect. 18 1
179 49.69 precipitation 0.1 30 < th dose dependent rect. 16 17
180 49.70 humidity 50.0 90 > th dose independent rect. 9 10
182 49.70 atmosphere 1005.0 90 > th dose dependent rect. 9 19
185 49.71 atmosphere 995.0 30 > th dose independent rect. 16 17
192 49.74 temperature 10.0 10 > th dose independent rect. 9 7
197 49.74 atmosphere 1015.0 10 < th dose independent rect. 9 7
199 49.74 precipitation 0.1 10 < th dose independent rect. 9 7
201 49.74 temperature 10.0 10 > th dose independent rect. 16 17
204 49.74 precipitation 0.1 10 < th dose dependent rect. 9 7
208 49.75 wind 5.0 90 < th dose independent rect. 3 6
210 49.75 atmosphere 995.0 10 > th dose independent rect. 9 7
216 49.76 temperature 30.0 270 < th dose independent rect. 7 9
219 49.77 radiation 1.0 30 < th dose independent sin 12 NA
223 49.77 wind 7.0 4320 > th dose dependent rect. 15 1
232 49.80 humidity 80.0 14400 < th dose independent rect. 17 5
234 49.80 humidity 60.0 90 > th dose independent rect. 3 6
242 49.82 temperature 30.0 90 < th dose independent rect. 3 6
258 49.85 precipitation 0.1 90 < th dose independent rect. 3 6
259 49.85 wind 1.0 30 > th dose independent rect. 9 7
260 49.85 wind 1.0 90 > th dose independent rect. 9 18
261 49.85 precipitation 0.1 90 < th dose dependent rect. 3 6
267 49.87 humidity 70.0 270 > th dose independent rect. 18 9
268 49.87 humidity 70.0 14400 > th dose dependent rect. 19 5
274 49.89 temperature 20.0 720 > th dose independent rect. 5 2
284 49.90 atmosphere 995.0 30 > th dose dependent rect. 22 6
290 49.91 temperature 10.0 90 > th dose independent rect. 3 6
293 49.91 atmosphere 995.0 90 > th dose independent rect. 3 6
294 49.91 atmosphere 1015.0 90 < th dose independent rect. 3 6
296 49.91 temperature 10.0 90 > th dose independent rect. 9 18
306 49.93 humidity 80.0 14400 < th dose independent rect. 18 3
313 49.94 wind 1.0 270 > th dose independent rect. 2 5
314 49.94 humidity 50.0 14400 > th dose dependent rect. 20 4
326 49.96 humidity 60.0 14400 > th dose dependent rect. 17 11
336 49.98 precipitation 0.1 270 < th dose independent rect. 17 10
339 49.98 precipitation 0.1 270 < th dose dependent rect. 17 10
379 50.04 radiation 1.0 270 > th dose independent rect. 7 6
381 50.04 precipitation 0.1 270 < th dose independent rect. 3 14
385 50.04 precipitation 0.1 270 < th dose dependent rect. 3 14
386 50.05 humidity 50.0 270 > th dose independent rect. 17 10
393 50.06 wind 5.0 270 < th dose independent rect. 3 3
411 50.08 humidity 60.0 14400 > th dose dependent sin 13 NA
420 50.09 wind 9.0 30 < th dose independent rect. 9 7
426 50.09 radiation 20.0 270 < th dose dependent rect. 17 10
434 50.10 radiation 10.0 270 < th dose independent rect. 17 10
445 50.10 atmosphere 1005.0 90 > th dose dependent rect. 11 17
451 50.11 atmosphere 995.0 270 > th dose independent rect. 17 10
458 50.12 humidity 80.0 4320 > th dose independent rect. 22 2
465 50.13 atmosphere 1010.0 270 < th dose independent rect. 3 3
481 50.14 precipitation 0.1 90 < th dose independent rect. 9 18
489 50.14 precipitation 0.1 90 < th dose dependent rect. 9 18
515 50.17 wind 9.0 270 < th dose independent rect. 13 18
529 50.18 precipitation 0.1 270 < th dose independent rect. 3 3
532 50.18 temperature 10.0 1440 > th dose independent rect. 10 7
536 50.18 humidity 50.0 270 > th dose independent rect. 7 10
537 50.18 temperature 10.0 1440 > th dose independent rect. 17 17
544 50.18 precipitation 0.1 270 < th dose dependent rect. 3 3
545 50.18 radiation 30.0 270 < th dose dependent rect. 3 4
564 50.19 temperature 30.0 270 < th dose independent rect. 17 10
583 50.20 humidity 80.0 14400 < th dose independent rect. 19 1
604 50.21 precipitation 0.1 90 < th dose independent rect. 4 18
608 50.21 humidity 90.0 14400 < th dose dependent rect. 20 3
609 50.21 wind 9.0 90 < th dose dependent rect. 3 6
610 50.21 temperature 10.0 270 > th dose dependent rect. 12 10
614 50.21 precipitation 0.1 90 < th dose dependent rect. 4 18
619 50.22 wind 9.0 270 < th dose independent rect. 12 10
623 50.22 wind 9.0 90 < th dose independent rect. 9 18
626 50.22 atmosphere 995.0 90 > th dose independent rect. 9 18
643 50.23 humidity 80.0 14400 > th dose independent rect. 19 1
650 50.23 radiation 20.0 270 < th dose independent rect. 1 8
653 50.23 wind 9.0 30 < th dose independent rect. 4 18
663 50.23 temperature 10.0 10 > th dose dependent rect. 16 17
667 50.24 wind 9.0 270 < th dose independent rect. 3 14
669 50.24 wind 5.0 4320 > th dose dependent rect. 15 4
670 50.24 temperature 10.0 720 > th dose dependent rect. 3 4
688 50.25 humidity 50.0 270 > th dose independent rect. 7 6
690 50.25 temperature 10.0 270 > th dose independent rect. 12 10
691 50.25 temperature 10.0 270 > th dose independent rect. 22 14
692 50.25 atmosphere 995.0 270 > th dose independent rect. 22 14
707 50.26 temperature 10.0 270 > th dose independent rect. 3 3
710 50.26 humidity 50.0 270 > th dose independent rect. 3 3
713 50.26 atmosphere 995.0 270 > th dose independent rect. 3 3
721 50.26 precipitation 0.1 270 < th dose independent rect. 7 6
726 50.26 temperature 10.0 270 > th dose independent rect. 6 21
732 50.26 temperature 10.0 90 > th dose dependent rect. 4 5
734 50.26 precipitation 0.1 270 < th dose dependent rect. 7 6
745 50.27 humidity 50.0 270 > th dose independent rect. 22 14
746 50.27 atmosphere 1015.0 30 < th dose independent rect. 16 17
748 50.27 wind 7.0 4320 > th dose dependent rect. 13 6
760 50.27 atmosphere 995.0 270 > th dose dependent rect. 7 19
766 50.28 temperature 10.0 270 > th dose independent rect. 7 6
767 50.28 atmosphere 995.0 270 > th dose independent rect. 7 6
768 50.28 atmosphere 1015.0 270 < th dose independent rect. 7 6
770 50.28 temperature 10.0 270 > th dose independent rect. 17 10
771 50.28 atmosphere 1015.0 270 < th dose independent rect. 12 10
775 50.28 temperature 10.0 270 > th dose independent rect. 3 14
776 50.28 atmosphere 1015.0 270 < th dose independent rect. 3 14
777 50.28 temperature 10.0 270 > th dose independent rect. 13 18
823 50.30 precipitation 0.1 270 < th dose independent rect. 13 18
842 50.30 precipitation 0.1 270 < th dose dependent rect. 13 18
847 50.31 wind 7.0 270 < th dose independent rect. 9 1
851 50.31 wind 1.0 270 > th dose independent rect. 3 3
858 50.31 precipitation 0.1 270 < th dose independent rect. 6 21
871 50.31 precipitation 0.1 270 < th dose dependent rect. 6 21
872 50.32 humidity 80.0 14400 > th dose independent sin 15 NA
904 50.33 radiation 30.0 90 < th dose independent rect. 19 14
920 50.34 humidity 80.0 30 > th dose independent rect. 22 6
923 50.34 wind 1.0 270 > th dose independent rect. 7 19
939 50.35 wind 9.0 270 < th dose independent rect. 7 6
959 50.36 temperature 20.0 720 < th dose independent rect. 6 1
963 50.36 wind 9.0 270 < th dose independent rect. 17 10
965 50.36 radiation 10.0 30 > th dose independent rect. 16 15