Os02g0327100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ARL2 G-protein.
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Os02g0327100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ARL2 G-protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8.9 | 0.14 | 12.2 | 0.54 | 0.504 | -0.438 | -0.276 | 1.18 | 0.32 | 23 | 26.76 | 919 | -- | -- |
| 9.11 | 0.141 | 12.2 | 0.345 | 0.491 | -0.309 | -0.22 | -- | 0.289 | 23.1 | 26.48 | 959 | -- | -- |
| 9.2 | 0.141 | 12.2 | 0.537 | 0.504 | -0.42 | -- | 0.989 | 0.321 | 23.2 | 26.68 | 978 | -- | -- |
| 9.3 | 0.142 | 12.2 | 0.356 | 0.498 | -0.32 | -- | -- | 0.289 | 23.1 | 26.37 | 953 | -- | -- |
| 16.26 | 0.189 | 12.2 | 0.529 | -- | -0.616 | -- | 0.799 | 0.41 | -- | 17.25 | 9 | -- | -- |
| 11.74 | 0.161 | 12.2 | 0.267 | 0.422 | -- | -0.287 | -- | 0.281 | 23.4 | -- | -- | -- | -- |
| 12.09 | 0.163 | 12.2 | 0.279 | 0.423 | -- | -- | -- | 0.282 | 23.4 | -- | -- | -- | -- |
| 16.89 | 0.192 | 12.2 | 0.407 | -- | -0.618 | -- | -- | 0.375 | -- | 16.32 | 7 | -- | -- |
| 12.42 | 0.164 | 12.3 | -- | 0.476 | -0.236 | -- | -- | 0.237 | 23.3 | 27.6 | 954 | -- | -- |
| 23.32 | 0.226 | 12.2 | 0.29 | -- | -- | -- | -- | 0.287 | -- | -- | -- | -- | -- |
| 14.14 | 0.176 | 12.3 | -- | 0.426 | -- | -- | -- | 0.251 | 23.4 | -- | -- | -- | -- |
| 21.03 | 0.214 | 12.2 | -- | -- | -0.503 | -- | -- | 0.316 | -- | 16.32 | 7 | -- | -- |
| 25.53 | 0.236 | 12.2 | -- | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 8.90 | radiation | 30 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 2 | 8.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 6 | 8.94 | radiation | 30 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 9 | 8.94 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 22 | 8.95 | radiation | 30 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 32 | 8.97 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 37 | 9.00 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 38 | 9.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 39 | 9.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 65 | 9.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 85 | 9.05 | temperature | 10 | 720 | > th | dose dependent | sin | 22 | NA |
| 88 | 9.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 89 | 9.05 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 3 |
| 106 | 9.06 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 110 | 9.06 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 154 | 9.07 | temperature | 25 | 720 | > th | dose dependent | rect. | 9 | 15 |
| 156 | 9.08 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 172 | 9.08 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 2 |
| 223 | 9.09 | temperature | 25 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 224 | 9.10 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 225 | 9.10 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 226 | 9.10 | temperature | 25 | 720 | > th | dose dependent | sin | 19 | NA |
| 262 | 9.11 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 263 | 9.11 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 330 | 9.13 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 384 | 9.14 | wind | 5 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 484 | 9.16 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 539 | 9.17 | humidity | 50 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 542 | 9.17 | temperature | 25 | 720 | > th | dose dependent | no | NA | NA |
| 543 | 9.17 | radiation | 30 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 613 | 9.18 | wind | 5 | 43200 | < th | dose dependent | rect. | 3 | 4 |
| 615 | 9.18 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 7 |
| 761 | 9.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 852 | 9.22 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 4 |
| 906 | 9.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 18 |
| 919 | 9.23 | humidity | 80 | 43200 | > th | dose independent | rect. | 22 | 2 |