Os02g0732500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADP-ribosylation factor-like protein.
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Os02g0732500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADP-ribosylation factor-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.57 | 0.296 | 11.9 | -0.824 | 0.0835 | 0.881 | -0.561 | -2.71 | -0.107 | 15.5 | 19.41 | 1344 | -- | -- |
| 45.39 | 0.314 | 11.8 | -0.0852 | 0.0929 | 0.9 | -0.291 | -- | 0.092 | 16.3 | 15.61 | 1235 | -- | -- |
| 40.37 | 0.296 | 11.9 | -0.915 | 0.0667 | 0.858 | -- | -2.81 | -0.11 | 17.1 | 20.38 | 1477 | -- | -- |
| 45.52 | 0.314 | 11.8 | -0.0812 | 0.0983 | 0.966 | -- | -- | 0.114 | 16.2 | 15.13 | 1248 | -- | -- |
| 40.49 | 0.296 | 11.9 | -0.878 | -- | 0.85 | -- | -2.75 | -0.114 | -- | 20.46 | 1517 | -- | -- |
| 62.58 | 0.371 | 11.7 | 0.226 | 0.000828 | -- | 0.398 | -- | 0.279 | 2.85 | -- | -- | -- | -- |
| 62.87 | 0.371 | 11.7 | 0.217 | 0.0666 | -- | -- | -- | 0.277 | 20.6 | -- | -- | -- | -- |
| 46.04 | 0.316 | 11.8 | -0.0949 | -- | 1 | -- | -- | 0.0947 | -- | 14.27 | 1299 | -- | -- |
| 45.59 | 0.314 | 11.8 | -- | 0.116 | 1 | -- | -- | 0.11 | 15.4 | 13.96 | 1200 | -- | -- |
| 63.12 | 0.371 | 11.7 | 0.217 | -- | -- | -- | -- | 0.277 | -- | -- | -- | -- | -- |
| 64.12 | 0.375 | 11.7 | -- | 0.066 | -- | -- | -- | 0.253 | 20.9 | -- | -- | -- | -- |
| 46.24 | 0.317 | 11.8 | -- | -- | 0.963 | -- | -- | 0.111 | -- | 13.05 | 1292 | -- | -- |
| 64.36 | 0.374 | 11.7 | -- | -- | -- | -- | -- | 0.252 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 2 | 37.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 5 | 37.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 39 | 38.40 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 50 | 38.55 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 11 |
| 52 | 38.56 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 54 | 38.57 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 11 |
| 71 | 38.68 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 12 |
| 72 | 38.69 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 111 | 38.86 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 114 | 38.87 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 152 | 38.96 | wind | 3 | 43200 | > th | dose dependent | sin | 18 | NA |
| 174 | 39.00 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 210 | 39.09 | wind | 5 | 43200 | < th | dose independent | sin | 17 | NA |
| 243 | 39.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 16 |
| 281 | 39.20 | wind | 5 | 43200 | > th | dose independent | sin | 17 | NA |
| 291 | 39.21 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 299 | 39.22 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 13 |
| 351 | 39.28 | wind | 1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 353 | 39.28 | wind | 1 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 391 | 39.32 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 393 | 39.32 | wind | 1 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 429 | 39.35 | wind | 9 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 444 | 39.36 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 445 | 39.36 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 482 | 39.41 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 490 | 39.42 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 513 | 39.44 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 589 | 39.51 | wind | 9 | 43200 | < th | dose dependent | sin | 20 | NA |
| 723 | 39.59 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 815 | 39.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 903 | 39.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 22 |
| 909 | 39.71 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 999 | 39.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 20 |