Os11g0586900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADP-ribosylation factor-like protein 5.
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Os11g0586900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADP-ribosylation factor-like protein 5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.17 | 0.2 | 11 | -0.254 | 0.0149 | -0.817 | 0.0935 | 0.674 | -0.118 | 7.12 | 21.9 | 3863 | -- | -- |
| 18.61 | 0.201 | 11 | -0.364 | 0.0297 | -0.956 | 0.0805 | -- | -0.155 | 6.46 | 21.4 | 3903 | -- | -- |
| 18.18 | 0.199 | 11 | -0.246 | 0.0189 | -0.817 | -- | 0.675 | -0.12 | 9.35 | 21.9 | 3872 | -- | -- |
| 18.59 | 0.201 | 11 | -0.386 | 0.0171 | -0.944 | -- | -- | -0.171 | 7.22 | 21.3 | 3881 | -- | -- |
| 18.2 | 0.199 | 11 | -0.252 | -- | -0.818 | -- | 0.67 | -0.118 | -- | 21.87 | 3861 | -- | -- |
| 39.9 | 0.296 | 11.1 | -0.938 | 0.0672 | -- | -0.0378 | -- | -0.478 | 12.3 | -- | -- | -- | -- |
| 39.91 | 0.296 | 11.1 | -0.94 | 0.0673 | -- | -- | -- | -0.478 | 12.1 | -- | -- | -- | -- |
| 18.6 | 0.201 | 11 | -0.387 | -- | -0.938 | -- | -- | -0.17 | -- | 21.32 | 3884 | -- | -- |
| 21.37 | 0.215 | 11 | -- | 0.0174 | -1.11 | -- | -- | -0.0786 | 6.81 | 20.78 | 9765 | -- | -- |
| 40.19 | 0.296 | 11.1 | -0.942 | -- | -- | -- | -- | -0.479 | -- | -- | -- | -- | -- |
| 63.18 | 0.372 | 11.1 | -- | 0.0811 | -- | -- | -- | -0.373 | 12.7 | -- | -- | -- | -- |
| 21.14 | 0.214 | 11 | -- | -- | -1.09 | -- | -- | -0.0732 | -- | 21.1 | 8276 | -- | -- |
| 63.59 | 0.372 | 11.1 | -- | -- | -- | -- | -- | -0.374 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 7 | 18.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 18 | 18.82 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 27 | 18.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 28 | 18.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 29 | 18.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 52 | 18.96 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 84 | 19.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 14 |
| 100 | 19.06 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 346 | 19.37 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 352 | 19.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 376 | 19.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 412 | 19.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 413 | 19.47 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 433 | 19.50 | temperature | 20 | 4320 | > th | dose independent | sin | 12 | NA |
| 567 | 19.67 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 578 | 19.69 | temperature | 20 | 4320 | < th | dose independent | sin | 11 | NA |
| 960 | 20.20 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |