BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0641800 Os02g0641800|AK066504
(483 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0641800 Similar to RNA helicase (Fragment) 904 0.0
Os04g0533000 Similar to RNA helicase (Fragment) 855 0.0
Os10g0503700 Similar to RNA helicase (Fragment) 798 0.0
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 289 3e-78
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 287 9e-78
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 283 2e-76
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 283 2e-76
Os01g0549700 Similar to RNA helicase (Fragment) 266 2e-71
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 266 3e-71
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 224 1e-58
Os07g0301200 Similar to RNA helicase (Fragment) 218 6e-57
Os03g0669000 Similar to RNA helicase (Fragment) 211 8e-55
Os01g0172200 WW/Rsp5/WWP domain containing protein 210 2e-54
Os12g0481100 Similar to RNA helicase 209 4e-54
Os01g0549400 Similar to RNA helicase-like protein DB10 206 3e-53
Os11g0689400 WW/Rsp5/WWP domain containing protein 206 3e-53
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 204 2e-52
Os03g0827700 Similar to ATP-dependent RNA helicase 202 3e-52
AK107287 198 8e-51
AK111212 195 5e-50
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 191 1e-48
Os07g0660000 191 1e-48
Os01g0618400 Similar to RNA helicase (Fragment) 187 2e-47
Os11g0599500 Similar to RNA helicase (Fragment) 185 7e-47
Os03g0805200 Similar to RNA helicase (Fragment) 184 2e-46
Os02g0150100 Similar to DEAD-box protein abstrakt 184 2e-46
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 182 3e-46
Os01g0618500 Similar to RNA helicase (Fragment) 181 1e-45
AK119751 180 2e-45
Os02g0826100 Similar to RNA helicase (Fragment) 179 6e-45
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 178 9e-45
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 178 1e-44
Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (... 177 2e-44
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 174 1e-43
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 174 1e-43
AK110107 174 2e-43
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 168 6e-42
Os03g0728800 Similar to RNA helicase (Fragment) 160 3e-39
Os09g0520700 Similar to RNA helicase 157 2e-38
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 152 4e-37
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 152 4e-37
Os04g0510400 Similar to RNA helicase (Fragment) 150 2e-36
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 147 1e-35
Os05g0110500 Similar to RNA helicase (Fragment) 137 2e-32
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 132 6e-31
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 130 2e-30
Os06g0535100 Similar to Helicase pitchoune (Fragment) 122 8e-28
Os06g0697200 DEAD/DEAH box helicase domain containing protein 102 5e-22
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 100 2e-21
Os07g0517000 DEAD/DEAH box helicase domain containing protein 86 8e-17
AK068197 76 5e-14
AK063048 72 7e-13
Os02g0201900 DEAD/DEAH box helicase domain containing protein 70 3e-12
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/437 (100%), Positives = 437/437 (100%)
Query: 47 WLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT 106
WLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT
Sbjct: 47 WLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT 106
Query: 107 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 166
KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 107 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 166
Query: 167 ALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ 226
ALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ
Sbjct: 167 ALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ 226
Query: 227 PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL 286
PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL
Sbjct: 227 PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL 286
Query: 287 MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 346
MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 287 MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 346
Query: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
Query: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 466
TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 466
Query: 467 TEIKPIPPQIDQAIYCQ 483
TEIKPIPPQIDQAIYCQ
Sbjct: 467 TEIKPIPPQIDQAIYCQ 483
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/437 (93%), Positives = 422/437 (96%), Gaps = 6/437 (1%)
Query: 47 WLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT 106
WLRRNQIA EAAG P P DGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT
Sbjct: 68 WLRRNQIAAEAAGASEQKAP------PVADGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT 121
Query: 107 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 166
KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 122 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 181
Query: 167 ALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ 226
ALEKIDQ+KNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI+RLYQ
Sbjct: 182 ALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQ 241
Query: 227 PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL 286
PVHLLVGTPGRILDLTKKG+C+LK+CSML+MDEADKLLSPEFQPS+++LIRYLP++RQIL
Sbjct: 242 PVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQIL 301
Query: 287 MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 346
MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 302 MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 361
Query: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 362 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 421
Query: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 466
TRGIDIQAVNVVINFDFPK+AETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 422 TRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 481
Query: 467 TEIKPIPPQIDQAIYCQ 483
TEIKPIPPQID+AIYCQ
Sbjct: 482 TEIKPIPPQIDRAIYCQ 498
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 798 bits (2060), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/437 (88%), Positives = 408/437 (93%), Gaps = 5/437 (1%)
Query: 47 WLRRNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT 106
WLRR+Q A S A + ++ +DSSS+DWKAQL LP DTRYRTEDVTAT
Sbjct: 90 WLRRDQ-----ATAAAASGEVAARTAAQLEAVDSSSEDWKAQLNLPAPDTRYRTEDVTAT 144
Query: 107 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 166
KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 145 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 204
Query: 167 ALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ 226
ALEKID EKNAIQVVILVPTRELALQTSQVCKELGK+L IQVMV+TGGTSLKDDI+RLYQ
Sbjct: 205 ALEKIDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQ 264
Query: 227 PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL 286
PVHLLVGTPGRILDLT+KGIC+LKDCSML+MDEADKLL+PEFQPS+EQLI +LPA+RQ+L
Sbjct: 265 PVHLLVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFLPANRQLL 324
Query: 287 MFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 346
MFSATFPVTVK+FK+KYLP+PYVINLMDELTLKGITQ+YAFVEERQKVHCLNTLF KLQI
Sbjct: 325 MFSATFPVTVKDFKEKYLPRPYVINLMDELTLKGITQYYAFVEERQKVHCLNTLFLKLQI 384
Query: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 385 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 444
Query: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 466
TRGI IQAVNVVINFDFPKT+ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 445 TRGIGIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 504
Query: 467 TEIKPIPPQIDQAIYCQ 483
TEIK IPPQID A+YCQ
Sbjct: 505 TEIKTIPPQIDLAVYCQ 521
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 227/374 (60%), Gaps = 2/374 (0%)
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
+ F+ ++ +LL GIY GFE+PS IQ+ ++ ++G D++A+A++GTGKT+ +
Sbjct: 31 SSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVC 90
Query: 169 EKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPV 228
+ +D +Q +IL PTRELA QT +V +G ++ IQV GG S+ +DI +L V
Sbjct: 91 QIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEHGV 150
Query: 229 HLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMF 288
H++ GTPGR+ D+ K+ + +LI+DEAD++L F+ + + RYLP Q+ +
Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLI 210
Query: 289 SATFPVTVKEFKDKYLPKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 346
SAT P + E K++ P I + DELTL+GI QF+ VE E K L L+ L I
Sbjct: 211 SATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTI 270
Query: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
Q++IFCN+ +V+ L +++ ++ +H M Q R+ + +FR+GA R L+ TD++
Sbjct: 271 TQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVW 330
Query: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 466
RG+D+Q V++VIN+D P E Y+HR+GRSGRFG G+A+N + ED L IEQ
Sbjct: 331 ARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYS 390
Query: 467 TEIKPIPPQIDQAI 480
T+I +P + I
Sbjct: 391 TQIDEMPMNVADLI 404
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 287 bits (735), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 226/374 (60%), Gaps = 2/374 (0%)
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
+ F+ ++ +LL GIY GFE+PS IQ+ ++ ++G D++A+A++GTGKT+ +
Sbjct: 31 SSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVC 90
Query: 169 EKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPV 228
+ +D +Q +IL PTRELA QT +V +G + IQV GG S+ +DI +L V
Sbjct: 91 QIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGV 150
Query: 229 HLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMF 288
H++ GTPGR+ D+ K+ + +LI+DEAD++L F+ + + RYLP Q+ +
Sbjct: 151 HVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLI 210
Query: 289 SATFPVTVKEFKDKYLPKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 346
SAT P + E K++ P I + DELTL+GI QF+ VE E K L L+ L I
Sbjct: 211 SATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTI 270
Query: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
Q++IFCN+ +V+ L +++ ++ +H M Q R+ + +FR+GA R L+ TD++
Sbjct: 271 TQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVW 330
Query: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 466
RG+D+Q V++VIN+D P E Y+HR+GRSGRFG G+A+N + ED L IEQ
Sbjct: 331 ARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYS 390
Query: 467 TEIKPIPPQIDQAI 480
T+I +P + I
Sbjct: 391 TQIDEMPMNVADLI 404
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 223/368 (60%), Gaps = 2/368 (0%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F+D L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
Query: 171 IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHL 230
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 103 LDYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHV 162
Query: 231 LVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSA 290
+VGTPGR+ D+ ++ M ++DEAD++LS F+ + + + LP+ Q+ +FSA
Sbjct: 163 VVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSA 222
Query: 291 TFPVTVKEFKDKYLPKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 348
T P E K++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 223 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQ 282
Query: 349 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 408
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 283 SVIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
Query: 409 GIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 468
GID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVV 402
Query: 469 IKPIPPQI 476
I+ +P +
Sbjct: 403 IEELPANV 410
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 222/368 (60%), Gaps = 2/368 (0%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F+D L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
Query: 171 IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHL 230
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 103 LDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHV 162
Query: 231 LVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSA 290
+VGTPGR+ D+ ++ M ++DEAD++LS F+ + + + LP Q+ +FSA
Sbjct: 163 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 222
Query: 291 TFPVTVKEFKDKYLPKPYVINL-MDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 348
T P E K++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 223 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQ 282
Query: 349 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 408
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 283 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
Query: 409 GIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 468
GID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVT 402
Query: 469 IKPIPPQI 476
I+ +P +
Sbjct: 403 IEELPANV 410
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 224/378 (59%), Gaps = 8/378 (2%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + +L++
Sbjct: 53 FRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 112
Query: 171 IDQEKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKD--DIIRLYQP 227
ID + ++L TRELA Q + K+L +++V V GG +K D+++ P
Sbjct: 113 IDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 172
Query: 228 VHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLL-SPEFQPSVEQLIRYLPASRQIL 286
H++VGTPGRIL L ++ LK+ I+DE DK+L S + + V+++ + P +Q++
Sbjct: 173 -HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVM 231
Query: 287 MFSATFPVTVKEFKDKYLPKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKL 344
MFSAT ++ K++ P I + DE LTL G+ Q Y + E +K LN L L
Sbjct: 232 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDAL 291
Query: 345 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 404
NQ +IF SV+R L K + E + IH+ M Q+ R + +F+ G R LV TD
Sbjct: 292 DFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATD 351
Query: 405 LFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITY-EDRFNLYRIEQ 463
L RGIDI+ VN+VIN+D P +A++YLHRVGR+GRFG GLA+ ++ D L ++++
Sbjct: 352 LVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 411
Query: 464 ELGTEIKPIPPQIDQAIY 481
+IK +P QID + Y
Sbjct: 412 RFEVDIKELPEQIDTSTY 429
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 224/378 (59%), Gaps = 8/378 (2%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + +L++
Sbjct: 53 FRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 112
Query: 171 IDQEKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLKD--DIIRLYQP 227
ID + ++L TRELA Q + K+L +++V V GG +K D+++ P
Sbjct: 113 IDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 172
Query: 228 VHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLL-SPEFQPSVEQLIRYLPASRQIL 286
H++VGTPGRIL L ++ LK+ I+DE DK+L S + + V+++ + P +Q++
Sbjct: 173 -HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVM 231
Query: 287 MFSATFPVTVKEFKDKYLPKPYVINLMDE--LTLKGITQFYAFVEERQKVHCLNTLFSKL 344
MFSAT ++ K++ P I + DE LTL G+ Q Y + E +K LN L L
Sbjct: 232 MFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDAL 291
Query: 345 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 404
NQ +IF SV+R L K + E + IH+ M Q+ R + +F+ G R LV TD
Sbjct: 292 DFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATD 351
Query: 405 LFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITY-EDRFNLYRIEQ 463
L RGIDI+ VN+VIN+D P +A++YLHRVGR+GRFG GLA+ ++ D L ++++
Sbjct: 352 LVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 411
Query: 464 ELGTEIKPIPPQIDQAIY 481
+IK +P QID + Y
Sbjct: 412 RFEVDIKELPEQIDTSTY 429
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 200/387 (51%), Gaps = 26/387 (6%)
Query: 116 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI---- 171
L ELL + + G++ PSPIQ SIP+ L D++ A+ G+GKTAAF +P L I
Sbjct: 322 LGTELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLP 381
Query: 172 ----DQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQP 227
+ E V++ PTRELA Q + + +L I+V+ GG S+++ ++ Q
Sbjct: 382 PISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQG 441
Query: 228 VHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPAS----- 282
+++ TPGR+LD ++ +L C+ +++DEAD+++ F+P V ++ +P+S
Sbjct: 442 CEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPE 501
Query: 283 ------------RQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKG-ITQFYAFVE 329
R MFSAT P V+ KYL P V+ + ITQ +
Sbjct: 502 NEDEELDAKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVIMTK 561
Query: 330 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 389
E +K+ L + + L +I+FCN+ + AK + + G+ +H Q+ R
Sbjct: 562 ESEKMSRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRETSL 621
Query: 390 HDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNL 449
FRN LV TD+ RGIDI V VIN++ P + +TY HR+GR+GR G GLA +
Sbjct: 622 DGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSF 681
Query: 450 ITYEDRFNLYRIEQELGTEIKPIPPQI 476
+T E+ + ++Q L P+PP++
Sbjct: 682 LTLENTDIFFDLKQMLIQSNSPVPPEL 708
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 193/364 (53%), Gaps = 22/364 (6%)
Query: 127 KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI-------DQEKNAIQ 179
KGFERPSPIQ + P L G D + A G+GKT AF +PAL + +K +
Sbjct: 110 KGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPR 169
Query: 180 VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRIL 239
V++L PTRELA Q + V E G I + GGTS I L V +++GTPGR+
Sbjct: 170 VLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMK 229
Query: 240 DLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEF 299
DL + GIC L D S +++DEAD++L F+P V ++ + RQ +MFSAT+P V +
Sbjct: 230 DLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQL 289
Query: 300 KDKYL-PKP--YVINLMDELTLKGITQFYAFVEERQKVHCLNTL---FSKLQINQSIIFC 353
+++ P P VI D + Q +++R + L L + K Q N+ ++F
Sbjct: 290 AQEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFV 349
Query: 354 ---NSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 410
RVE + ++ G+S +H Q R + F+ G+C ++ TD+ +RG+
Sbjct: 350 LYKREATRVETMLQR---RGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGL 406
Query: 411 DIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDR---FNLYRIEQELGT 467
DI V VVIN+ +P T E Y+HR+GR+GR G G+A T E++ L + +E G
Sbjct: 407 DIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQ 466
Query: 468 EIKP 471
+ P
Sbjct: 467 VVPP 470
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 129/373 (34%), Positives = 199/373 (53%), Gaps = 12/373 (3%)
Query: 105 ATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFC 164
A + + F + + EL+ G++ P+ IQ E+IP AL G D++ + G+GKT AF
Sbjct: 37 ARRPSTFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFA 96
Query: 165 IPALEKI-DQEK-NAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDII 222
+P ++ + Q+K A+ +L PTRELA Q Q + LG + + V GG +
Sbjct: 97 LPIIQALLKQDKPQALFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAV 156
Query: 223 RLYQPVHLLVGTPGRILD-LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPA 281
L + H++VGTPGR+LD LT L L++DEADKLL+ EFQ +++ ++ +P
Sbjct: 157 SLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPK 216
Query: 282 SRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL-TLKGITQFYAFVEERQK----VHC 336
R+ +FSAT V + + L P + + + T+ + Q + FV K VH
Sbjct: 217 ERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVPADYKDCFLVHV 276
Query: 337 LNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGA 396
LN L + +IF + LLA + L + I +M QD R + F+
Sbjct: 277 LNELPGSM----IMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKD 332
Query: 397 CRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRF 456
C L+CTD+ +RG+DIQ V+VVIN+D P ++ Y+HRVGR+ R G+ G AV+L+ +
Sbjct: 333 CNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAM 392
Query: 457 NLYRIEQELGTEI 469
IE+ LG EI
Sbjct: 393 WFKMIEKLLGYEI 405
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 190/348 (54%), Gaps = 9/348 (2%)
Query: 115 FLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA---LEKI 171
K + + + + GF P+PIQ +S PIAL DI+A AK G+GKT + IP L+++
Sbjct: 237 LFKSTIYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRL 296
Query: 172 DQ-EKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHL 230
++ V++L PTRELA Q K+ G+ +I + GG + L + +
Sbjct: 297 QHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADI 356
Query: 231 LVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSA 290
+V TPGR+ D+ + L S L++DEAD++L F+P + ++++ + RQ LMF+A
Sbjct: 357 VVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTA 416
Query: 291 TFPVTVKEFKDKYLPKPYVINL--MDELTL-KGITQFYAFVEERQKVHCLNTLF-SKLQI 346
T+P V++ L P +N+ D+L K ITQ+ + +K L+ + S+
Sbjct: 417 TWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQILRSQEPG 476
Query: 347 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 406
++ IIFC++ + LA+ + Y IH Q R+ V +FR+G C LV TD+
Sbjct: 477 SKIIIFCSTKRMCDQLARNLARQ-YGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVA 535
Query: 407 TRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYED 454
RG+DI+ + VV+N+DFP E Y+HR+GR+GR G G+A +D
Sbjct: 536 ARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQD 583
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 196/378 (51%), Gaps = 22/378 (5%)
Query: 108 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA 167
N F + L R LL G+++P+PIQ IP+ALTG DI A G+GKTAAF +P
Sbjct: 223 ANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAFSLPV 282
Query: 168 LEKI---DQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRL 224
LE++ + AI+V+IL PTRELA Q + ++L + I+ + GG S K + L
Sbjct: 283 LERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIVGGLSTKVQEVAL 342
Query: 225 YQPVHLLVGTPGRILDLTKKGICI-LKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASR 283
++V TPGRI+D + + + L+D ++LI+DEAD+LL F +++LIR P R
Sbjct: 343 RSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQELIRMCPRRR 402
Query: 284 QILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLK---GITQFYAFVEERQKVH----- 335
Q ++FSAT + E L KP + L + +LK +T+ + ++ +
Sbjct: 403 QTMLFSATMTEEINELVTLSLNKP--VRLEADPSLKRPATLTEEVVRIRRAREANQEAVL 460
Query: 336 ---CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDF 392
CL T K+ IIF + + L G +H + Q R F
Sbjct: 461 LALCLKTFKDKV-----IIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLEALELF 515
Query: 393 RNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITY 452
+ L+ TD+ RGIDI V VINF P+ A TYLHRVGR+ R G G AV +T
Sbjct: 516 KKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTD 575
Query: 453 EDRFNLYRIEQELGTEIK 470
+DR L I ++ G+++K
Sbjct: 576 DDRSLLKAIAKKAGSQLK 593
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/352 (34%), Positives = 186/352 (52%), Gaps = 9/352 (2%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
FE E+L I GF P+PIQ +S PIAL D++A AK G+GKT + +P
Sbjct: 152 FETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMH 211
Query: 171 I----DQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQ 226
I + ++ V++L PTRELA Q + + G+ +I GG + L +
Sbjct: 212 IKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDR 271
Query: 227 PVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL 286
V ++V TPGR+ D+ + LK S L++DEAD++L F+P + ++++ +P RQ L
Sbjct: 272 GVDVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTL 331
Query: 287 MFSATFPVTVKEFKDKYLPKP--YVINLMDELTLK-GITQFYAFVEERQKVHCLNTLF-S 342
M++AT+P V+ + L P I +DEL ITQ + +K+ L + S
Sbjct: 332 MYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRS 391
Query: 343 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 402
+ ++ +IFC + + LA+ +T + IH Q R +V FR+G LV
Sbjct: 392 QDSGSKVLIFCTTKRMCDQLARTLTRQ-FGASAIHGDKSQSEREKVLSHFRSGRSPILVA 450
Query: 403 TDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYED 454
TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR G G+A +D
Sbjct: 451 TDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQD 502
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/374 (33%), Positives = 197/374 (52%), Gaps = 15/374 (4%)
Query: 95 DTRYRTEDVTATKGN------EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSD 148
D + +VTA N FE E+L I+ GF P+PIQ ++ P+AL D
Sbjct: 584 DAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRD 643
Query: 149 ILARAKNGTGKTAAFCIPALEKIDQEKN----AIQVVILVPTRELALQTSQVCKELGKHL 204
I+A AK G+GKT + IPA + + +N V++L PTRELA Q + G+
Sbjct: 644 IVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVKFGRSS 703
Query: 205 KIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLL 264
++ GGTS + L + ++V TPGR+ D+ + L S L++DEAD++L
Sbjct: 704 RVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDILEMRKISLHQVSFLVLDEADRML 763
Query: 265 SPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINL--MDELTL-KGI 321
F+P + +++ +P +RQ LM++AT+P V + L P +N+ +DEL K I
Sbjct: 764 DMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSI 823
Query: 322 TQFYAFVEERQKVHCLNTLF-SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM 380
TQ+ V K L + ++ + ++ IIFC++ + LA+ I + IH
Sbjct: 824 TQYVEVVPPLDKQRRLEQILRAQERGSKVIIFCSTKKMCDQLARDIGR-SFGAASIHGDK 882
Query: 381 LQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRF 440
Q R+ V + FR G LV TD+ RG+DI+ + VVIN+DFP E Y+HR+GR+GR
Sbjct: 883 SQAERDNVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRA 942
Query: 441 GHLGLAVNLITYED 454
G G++ + +D
Sbjct: 943 GATGVSYTFFSEQD 956
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/352 (33%), Positives = 188/352 (53%), Gaps = 16/352 (4%)
Query: 116 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEK 175
L +LL I + GFE+P IQ +++PI ++G D + AK G+GKT AF +P L + +
Sbjct: 431 LTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQP 490
Query: 176 NAIQV-----VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHL 230
+ +I+ PTREL +Q K+ K L I + GG+ + I L + +
Sbjct: 491 AVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEI 550
Query: 231 LVGTPGRILDL--TKKG-ICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILM 287
+V TPGR++D+ T G I L+ + L+MDEAD++ F+P + ++++ RQ ++
Sbjct: 551 VVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVL 610
Query: 288 FSATFPVTVKEFKDKYLPKPYVINLMDELTL-KGITQFYAFVEERQK----VHCLNTLFS 342
FSATFP V+ K L KP I + + K ITQ E ++ + L F
Sbjct: 611 FSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFFRLLELLGEWFD 670
Query: 343 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 402
K +I ++F +S ++ + L K + + GY C +H Q R DF++ C L+
Sbjct: 671 KGKI---LVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIA 727
Query: 403 TDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYED 454
T + RG+D++ + +V+N+D P E Y+HRVGR+GR G G AV I+ E+
Sbjct: 728 TSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEE 779
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 128/381 (33%), Positives = 207/381 (54%), Gaps = 22/381 (5%)
Query: 116 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEK 175
L +L+ + ++G PIQ + AL G D++ARAK GTGKT AF IP ++++ +E
Sbjct: 76 LPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEED 135
Query: 176 NA--------IQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQP 227
+ +V++L PTRELA Q + KE K+ + GG S L +
Sbjct: 136 DGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAP--KLSTVCVYGGVSYNVQQNALSRG 193
Query: 228 VHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILM 287
V ++VGTPGRI+DL G L + L++DEAD++L+ F+ VE +++ LPA RQ ++
Sbjct: 194 VDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSML 253
Query: 288 FSATFPVTVKEFKDKYLPKPYVINLM---DELTLKGITQFYAF----VEERQKVHCLNTL 340
FSAT P VK+ +YL P I+L+ DE +GI + YA +R + L T+
Sbjct: 254 FSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGI-KLYAIPLTSTSKRTVLSDLITV 312
Query: 341 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 400
++K ++I+F + + ++ +T + +H + Q R R + FR G L
Sbjct: 313 YAK--GGKTIVFTKTKRDADEVSLALTN-SIASEALHGDISQHQRERTLNGFRQGKFTVL 369
Query: 401 VCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR 460
V TD+ RG+DI V+++I+++ P ET++HR GR+GR G G A+ + T R +
Sbjct: 370 VATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRS 429
Query: 461 IEQELGTEIKPI-PPQIDQAI 480
+E+++G I PP I+ +
Sbjct: 430 LERDVGCRFDFISPPAIEDVL 450
>AK107287
Length = 554
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 214/428 (50%), Gaps = 20/428 (4%)
Query: 63 NSEPKAVAQSPAVDG-IDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELL 121
N E + P V G D QD++A ++ Q + VT+ F DY L
Sbjct: 92 NFEKNFYIEDPRVAGRSDREVQDYRASKQMTIQGQNV-PKPVTSFDEAGFPDYILSE--- 147
Query: 122 MGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQE-----KN 176
I + GF PS IQ ++ P+AL+G D++A A+ G+GKT F +PA+ I+ + +
Sbjct: 148 --IKKMGFAEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPGD 205
Query: 177 AIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPG 236
+IL PTRELA Q C G +++ GG L + +++ TPG
Sbjct: 206 GPIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQTRDLQRGAEIVIATPG 265
Query: 237 RILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTV 296
R++D+ G L+ + L+MDEAD++L F+P + ++++ + RQ LMFSAT+P V
Sbjct: 266 RLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEV 325
Query: 297 KEFKDKYLPKPYVIN-----LMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 351
+ +L +N L +K I + + E++ K+ + L + Q N +I
Sbjct: 326 QRLAGDFLNDFAQVNIGSTELAANHNVKQIIEVCSEFEKKGKL--IGHLETISQENGKVI 383
Query: 352 FCNSVNRV-ELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 410
S RV + L K + + G+ IH Q R+ V +F++G +V T + +RG+
Sbjct: 384 IFTSTKRVADDLTKYLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSPIMVATAVASRGL 443
Query: 411 DIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 470
D++ ++ VIN+DFP E Y+H++GR+GR G G A T E+ + + L +
Sbjct: 444 DVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTFFTPENSKSARELVGILREAKQ 503
Query: 471 PIPPQIDQ 478
IP +I++
Sbjct: 504 EIPREIEE 511
>AK111212
Length = 545
Score = 195 bits (496), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 195/357 (54%), Gaps = 14/357 (3%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F++ R ++ + +GF P+ IQ + P+AL+G D++ A+ G+GKT +C+P++
Sbjct: 139 FDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVH 198
Query: 171 IDQE-----KNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLY 225
I+ + + V++L PTRELA+Q + K+ G+ +I+ GG I L
Sbjct: 199 INAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLS 258
Query: 226 QPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQI 285
+ V + + TPGR++D+ + G L+ + L++DEAD++L F+P + ++I + RQ
Sbjct: 259 RGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQT 318
Query: 286 LMFSATFPVTVKEFKDKYLPKPYVINL--MDELTLKGITQFYAFV---EERQKV--HCLN 338
L +SA +P V+ +L +N+ M+ ITQ V E+R ++ H
Sbjct: 319 LTWSAAWPKEVRALASDFLNDFIQVNIGSMELAANHRITQIVEVVTDMEKRDRMIKHLEK 378
Query: 339 TLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACR 398
T+ +K N+ +IF + + + + + + G+ IH Q+ R+ V F+ G
Sbjct: 379 TMENKE--NKILIFVGTKRIADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSP 436
Query: 399 NLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDR 455
+V TD+ +RGID++ + V+N+D+P +E Y+HR+GR+GR G G A+ L T +++
Sbjct: 437 IMVATDVASRGIDVRNITHVLNYDYPHNSEDYIHRIGRTGRAGAKGTAITLFTTDNQ 493
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 204/404 (50%), Gaps = 8/404 (1%)
Query: 80 SSSQDWKAQLKLPPQDTRYRTEDVTATKGNE--FEDYFLKRELLMGIYEKGFERPSPIQE 137
SSS D A+ K P + E + K FE L E+ G+ KG+ P+PIQ
Sbjct: 18 SSSADAMAEHKPLPGRPKREGEGASKRKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQR 77
Query: 138 ESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNA--IQVVILVPTRELALQTSQ 195
+++P+ L G DI A A+ G+GKTAAF +P ++++ + I+ +IL PTR+LA QT +
Sbjct: 78 KAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLK 137
Query: 196 VCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILD-LTKKGICILKDCSM 254
++LGK +++ + GG S++ L + +++ TPGR++ L + L+
Sbjct: 138 FAQQLGKFTDLKISLIVGGDSMESQFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEY 197
Query: 255 LIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINL-M 313
++ DEAD L S + ++ L +RQ L+FSAT P + +F L P ++ L +
Sbjct: 198 VVFDEADSLFSLGLIQQLHDILHKLSDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDL 257
Query: 314 DELTLKGITQFYAFVEERQKVHCLNTLFSKL--QINQSIIFCNSVNRVELLAKKITELGY 371
D+ + + + + +K+ L L + Q+IIF ++ + VE L E G
Sbjct: 258 DKKISPDLKLAFFTLRQEEKLAALLYLVRERISSEEQTIIFVSTKHHVEFLNILFREEGL 317
Query: 372 SCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYL 431
+ M Q+ RN FR L+ TD+ RG+DI ++ V+N+DFP + ++
Sbjct: 318 EPSLSYGAMDQEARNIHISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFV 377
Query: 432 HRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQ 475
HRVGR R G G A +T ED L + L ++P P +
Sbjct: 378 HRVGRVARQGRSGTAYTFVTSEDMAYLLDLHLFLSKPLRPAPTE 421
>Os07g0660000
Length = 444
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 188/379 (49%), Gaps = 36/379 (9%)
Query: 128 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--DQEKNAIQVVILVP 185
G++ P+ IQ E IP AL G D++ + G+GKTAAF +P ++ + + + +L P
Sbjct: 2 GWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLAP 61
Query: 186 TRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLV------------- 232
TRELA+Q ++ + LG + +Q V GG I L + H++V
Sbjct: 62 TRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVWWRSSRACLPEHL 121
Query: 233 -----------------GTPGRILD-LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQ 274
GTPGR+LD LT L++DEAD LL +FQ +V+
Sbjct: 122 RKGFDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDD 181
Query: 275 LIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTL-KGITQFYAFVEERQK 333
++ +P R+ +FSAT VK+ + L P + + + +L + Q V + K
Sbjct: 182 ILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYK 241
Query: 334 VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFR 393
L + +K+ + ++F + LLA + L + I +M QD R + FR
Sbjct: 242 DCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLRFKAISISGQMSQDKRLGALNRFR 301
Query: 394 NGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLIT-Y 452
C LVCTD+ +RG+DIQ V+VVIN+DFP ++ Y+HRVGR+ R G G AV+L+ +
Sbjct: 302 TRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVSLVNQF 361
Query: 453 EDRFNLYRIEQELGTEIKP 471
E F EQ LG E P
Sbjct: 362 EGEF-FKLTEQFLGGEEIP 379
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 194/363 (53%), Gaps = 21/363 (5%)
Query: 121 LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--------D 172
L + + G+ER + +QE ++P+ L G D+LA+AK GTGKT AF +PA+E + D
Sbjct: 138 LKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRD 197
Query: 173 QEKNAIQVVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKDDIIRL-YQPVHL 230
Q + +I ++++ PTRELA+Q + K+L K H + V V GGT L + + P +
Sbjct: 198 QLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGTRLTQEQRSMQANPCQI 257
Query: 231 LVGTPGRILDLTKK--GICI-LKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILM 287
LV TPGR+ D + G LK +L++DEAD+LL F+ +E++I +P RQ L+
Sbjct: 258 LVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERIIASVPKERQTLL 317
Query: 288 FSATFPVTVKEFKDKYLPKPY-VINLM---DELTLKGITQFYAFVEERQKVHCLNTLFSK 343
FSAT P V++ + K Y IN + DE T ++Q + L + K
Sbjct: 318 FSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFMIAPLDLHFSILYDVLKK 377
Query: 344 LQINQS----IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN 399
+ IIFC + +L+A+ +++L + IH++ Q R +V +FR
Sbjct: 378 HVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSARTKVSDEFRKSRGLI 437
Query: 400 LVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY 459
LV +D+ RG+D V +VI P + Y+HR+GR+GR G G + L+ +++ L
Sbjct: 438 LVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEGQGLLLLAPWEKYFLS 497
Query: 460 RIE 462
I+
Sbjct: 498 SIK 500
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 185 bits (469), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 193/383 (50%), Gaps = 27/383 (7%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F + L + L I + RP+P+Q +IPI+L G D++A A+ G+GKTAAFC P +
Sbjct: 157 FAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISG 216
Query: 171 IDQEKNAIQ------------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 218
I + A + +IL PTREL++Q + ++ ++V+V GG +
Sbjct: 217 IMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPIN 276
Query: 219 DDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRY 278
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P V +++
Sbjct: 277 QQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQ 336
Query: 279 L----PASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL--TLKGITQFYAFVEERQ 332
+ P +RQ ++FSATFP ++ +L + Y+ + + + I Q FV+E
Sbjct: 337 MDMPPPGARQTMLFSATFPKEIQRMASDFL-ENYIFLAVGRVGSSTDLIVQRVEFVQEAD 395
Query: 333 K-VHCLNTLFSKL------QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 385
K H ++ L ++ + +++F + + L + G+ IH Q R
Sbjct: 396 KRSHLMDLLHAQRDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQER 455
Query: 386 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGL 445
F++G LV TD+ RG+DI V V+NFD P + Y+HR+GR+GR G GL
Sbjct: 456 EYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 515
Query: 446 AVNLITYEDRFNLYRIEQELGTE 468
A E+ ++ R EL E
Sbjct: 516 ATAFFN-ENNSSMARSLAELMQE 537
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 187/390 (47%), Gaps = 25/390 (6%)
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
N F + L L I + +P+P+Q +IPI++ G D++A A+ G+GKTAAFC P +
Sbjct: 174 NTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPII 233
Query: 169 EKIDQEKNAIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 218
I + + +IL PTREL++Q + ++ ++V+V GG +
Sbjct: 234 SGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIH 293
Query: 219 DDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRY 278
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P + +++
Sbjct: 294 QQLRELERGVEILVATPGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQ 353
Query: 279 LP----ASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL--TLKGITQFYAFVEERQ 332
+ RQ ++FSATFP ++ +L Y+ + + + I Q FV E
Sbjct: 354 MDMPPRGVRQTMLFSATFPKEIQRMASDFLAD-YIFLAVGRVGSSTDLIAQRVEFVLEAD 412
Query: 333 KVHCLNTLFSKLQINQS-------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 385
K L L + N + ++F + + L + G+ IH Q R
Sbjct: 413 KRSYLMDLLHAQKANGTHGKQALTLVFVETKRGADALENWLYTNGFPATSIHGDRTQQER 472
Query: 386 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGL 445
F++GA LV TD+ RG+DI V VINFD P + Y+HR+GR+GR G GL
Sbjct: 473 EYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGL 532
Query: 446 AVNLITYEDRFNLYRIEQELGTEIKPIPPQ 475
A E +L R EL E PQ
Sbjct: 533 ATAFFN-EGNLSLARPLCELMQEANQEVPQ 561
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 191/382 (50%), Gaps = 20/382 (5%)
Query: 110 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 169
+F D L +L + EKG +P+PIQ + +P+ L+G D++ A G+GKT F +P +
Sbjct: 16 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIM 75
Query: 170 KIDQEKNAIQVV--------ILVPTRELALQTSQVCKELGKHLK------IQVMVTTGGT 215
QE+ + +V I+ P+RELA QT V ++ LK I+ ++ GG
Sbjct: 76 VALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGV 135
Query: 216 SLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 275
++ + + + VH++V TPGR+ DL K L +C L +DEAD+L+ F+ + ++
Sbjct: 136 DMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREV 195
Query: 276 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLK-GITQFYAFVEERQKV 334
+ A RQ L+FSAT P ++ F L KP ++N+ + Q +V+E ++
Sbjct: 196 FDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQEVEYVKEDARI 255
Query: 335 HCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRN 394
L K ++FC + V+ + + + G IH Q+ R F+N
Sbjct: 256 IYLLECLQKTP-PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFKN 314
Query: 395 GACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLI---- 450
G LV TD+ ++G+D + VIN+D P E Y+HR+GR+GR G G+A I
Sbjct: 315 GKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 374
Query: 451 TYEDRFNLYRIEQELGTEIKPI 472
T +L + +E I P+
Sbjct: 375 TETTLLDLKHLLKEAKQRIPPV 396
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 118/390 (30%), Positives = 187/390 (47%), Gaps = 25/390 (6%)
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
N F + L L I + +P+P+Q +IPI++ G D++A A+ G+GKTAAFC P +
Sbjct: 169 NTFAEIDLGDALNENIRRCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPII 228
Query: 169 EKIDQEKNAIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 218
I + + + +IL PTREL++Q + ++ ++V+V GG +
Sbjct: 229 SGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPIT 288
Query: 219 DDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRY 278
+ L + V +LV TPGR++DL ++ L+ L +DEAD++L F+P + +++
Sbjct: 289 QQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQ 348
Query: 279 LP----ASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL--TLKGITQFYAFVEERQ 332
+ RQ ++FSATFP ++ +L Y+ + + + I Q FV +
Sbjct: 349 MDMPPRGERQTMLFSATFPKEIQRMASDFLAD-YIFLAVGRVGSSTDLIVQRVEFVLDAD 407
Query: 333 KVHCLNTLFSKLQINQS-------IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 385
K L L + N + ++F + + L + G+ IH Q R
Sbjct: 408 KRSYLMDLLHAQRANGTHGKQALTLVFVETKRGADALENWLYNNGFPATSIHGDRTQQER 467
Query: 386 NRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGL 445
F++GA LV TD+ RG+DI V VINFD P + Y+HR+GR+GR G GL
Sbjct: 468 EYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKSGL 527
Query: 446 AVNLITYEDRFNLYRIEQELGTEIKPIPPQ 475
A E L R EL E PQ
Sbjct: 528 ATAFFN-ESNTPLARPLSELMQEANQEVPQ 556
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 181/336 (53%), Gaps = 15/336 (4%)
Query: 121 LMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ--EKNAI 178
L I + G+E+ + +QE ++PI L G D+LA+AK GTGKT AF +PA+E + +I
Sbjct: 86 LKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIELLSTLPRSPSI 145
Query: 179 QVVILVPTRELALQTSQVCKELGK-HLKIQVMVTTGGTSLKDDIIRL-YQPVHLLVGTPG 236
++++ PTRELA Q + ++L K H + V V GGT L + + P +LV TPG
Sbjct: 146 NLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGGTKLPQEQRSMQSNPCQILVATPG 205
Query: 237 RI---LDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFP 293
R+ L+ T +K +L++DEAD+LL F+ +E++I ++P RQ L+FSAT P
Sbjct: 206 RLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSATVP 265
Query: 294 VTVKEFKDKYLPKPY-VINLM---DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS 349
V++ + + Y IN + DE T ++Q Y L + K +
Sbjct: 266 EEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYMVAPLDLHFSILYNVLKKHIAEDA 325
Query: 350 ----IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 405
I+FC + +L+A+ +++L + IH++ Q R +V +FR LV +D+
Sbjct: 326 DYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTKVSDEFRKSKGLILVSSDV 385
Query: 406 FTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFG 441
RG+D V +VI P E Y+HR+GR+GR G
Sbjct: 386 SARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKG 421
>AK119751
Length = 628
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 187/377 (49%), Gaps = 26/377 (6%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F+ L ++ I + +P+P+Q +IPI L G DI+A A+ G+GKTAAFC P +
Sbjct: 167 FDQLDLGEVMMNNIRRCKYTKPTPVQRYAIPIGLAGRDIMACAQTGSGKTAAFCFPIISG 226
Query: 171 I---------DQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDI 221
+ Q K +IL PTREL Q + ++ I+ +V GG + + +
Sbjct: 227 LVKAGYQPTGRQRKALPAALILAPTRELTSQIYEEARKFSYQSGIRPVVIYGGAPVVNQL 286
Query: 222 IRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRY--L 279
+ + +LV TP R+ DL ++ L L +DEAD++L F+P + +++ +
Sbjct: 287 REMERGCDMLVATPRRLSDLIERARVSLAAIRYLALDEADRMLDMGFEPQIRRIVEGEDM 346
Query: 280 PAS--RQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL--TLKGITQFYAFVEERQK-- 333
P + RQ ++FSATFP ++ +L Y+ + + + I Q +V++ QK
Sbjct: 347 PPTGQRQTMLFSATFPKEIQRLAADFL-HDYIFLTVGRVGSSTDLIAQHIEYVQQDQKRE 405
Query: 334 --VHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHD 391
+ C+NT+ +++F + + L + I Q R
Sbjct: 406 TVLDCVNTVEGL-----TLVFVETKRGADQLEDYLLRQNLPATSIRGDKSQAEREMALRA 460
Query: 392 FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLIT 451
FR+G CR LV TD+ RG+DI V VIN+D PK + Y+HR+GR+GR G GLA T
Sbjct: 461 FRSGKCRILVATDVAARGLDIPHVTHVINYDLPKDIDDYVHRIGRTGRAGKKGLATAFFT 520
Query: 452 YEDRFNLYRIEQELGTE 468
+D F L R QE+ +E
Sbjct: 521 -DDDFGLARSLQEVLSE 536
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 196/389 (50%), Gaps = 24/389 (6%)
Query: 91 LPPQDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDIL 150
L + RY + + FE+ + + + + G+ + + +QE ++P+ L G D+L
Sbjct: 324 LGAERRRYESRGESLFTNKRFEECGISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVL 383
Query: 151 ARAKNGTGKTAAFCIPALEKI--------DQEKNAIQVVILVPTRELALQ-TSQVCKELG 201
+AK GTGK+AAF +PA+E + + + I +IL PTRELA+Q T++ L
Sbjct: 384 VKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLK 443
Query: 202 KHLKIQVMVTTGGTSLKDDIIRL-YQPVHLLVGTPGRILDL--TKKGICI-LKDCSMLIM 257
H I V GGT K D RL P +LV TPGR+LD K + L +L++
Sbjct: 444 YHQGIGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVL 503
Query: 258 DEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYV----INLM 313
DEAD LL F+ +E+++ LP RQ L+FSAT P V+ L + +V + L
Sbjct: 504 DEADHLLDLGFRTDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVGLG 563
Query: 314 DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQS-----IIFCNSVNRVELLAKKITE 368
T + Q Y + H + L + I+Q I+FC + E + + +
Sbjct: 564 AVETPTKVEQLYLVMPHELHFHMVYRLLRE-HIDQEVDYKVIVFCTTAMVTEFMYIMLRD 622
Query: 369 LGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAE 428
L + IH++ Q +R R+ +FR+ + LV +D+ TRG++ V +VI P E
Sbjct: 623 LKLNVREIHSRKPQLYRTRISEEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPSDRE 682
Query: 429 TYLHRVGRSGRFGHLGLAVNLIT-YEDRF 456
Y+HR+GR+GR G G + L+ +E+ F
Sbjct: 683 HYIHRLGRTGREGKSGKGILLLAPWEEYF 711
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 181/358 (50%), Gaps = 14/358 (3%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL-- 168
F D +L+ I ++G+E+P+ IQ +++PI L+G DI+ AK G+GKTAAF +P +
Sbjct: 221 FADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVH 280
Query: 169 ----EKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRL 224
++++E+ I VV PTRELA Q K+ K ++V GG S D L
Sbjct: 281 IMDQPELEKEEGPIGVV-CAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKEL 339
Query: 225 YQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQ 284
+++ TPGR++DL K + + L++DEAD++ F+P + ++ + RQ
Sbjct: 340 KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQ 399
Query: 285 ILMFSATFPVTVKEFKDKYLPKPYVINLMD----ELTLKGITQFYAFVEERQKVHCLNTL 340
L+FSAT P V+ + L P + + +K + E+ L L
Sbjct: 400 TLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQVVNVLPSDAEKMP-WLLEKL 458
Query: 341 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 400
+ ++F RV+ + ++ + G+ +H Q R F++G L
Sbjct: 459 PGMIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVL 518
Query: 401 VCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHL-GLAVNLITYED-RF 456
V TD+ RG+DI+++ V+NFD K + ++HR+GR+GR G G A LIT ++ RF
Sbjct: 519 VATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEVRF 576
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 176/350 (50%), Gaps = 8/350 (2%)
Query: 128 GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQEKNAIQVVILVPTR 187
G P+ +Q IP AL G D+L A+ G+GKTAAF +P L ++ ++ + + L PTR
Sbjct: 96 GMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRLGEDPYGVAALALAPTR 155
Query: 188 ELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGIC 247
ELA Q ++ + LG L ++ + GG L + H++V TPGRI L
Sbjct: 156 ELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLARRPHVVVATPGRIATLINDDPD 215
Query: 248 ILK---DCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYL 304
+ K L++DEAD++L F+ + + LP RQ +FSAT ++ +
Sbjct: 216 LAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLPKKRQTFLFSATISDNLRSLLELSG 275
Query: 305 PKPYVINLMDEL-TLKGITQFYAFVEERQKVHCLNTLFSKL---QINQSIIFCNSVNRVE 360
Y + T+ + Q Y V K L L SK+ I I+F ++ +
Sbjct: 276 NNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFYLLSKMNEDNIRSVIVFVSTCRTCQ 335
Query: 361 LLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVIN 420
L + ELG+ +H+ Q R H+F++ L+ TD+ +RG+DIQ V++VIN
Sbjct: 336 YLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSSKVPVLLATDVASRGLDIQTVDLVIN 395
Query: 421 FDFPKTAETYLHRVGRSGRFGHLGLAVNLITYE-DRFNLYRIEQELGTEI 469
+D P+ Y+HRVGR+ R GL+++ IT + D L+ IE +G ++
Sbjct: 396 YDVPRYPRDYIHRVGRTARATRGGLSISFITTQRDIRLLHEIEDVVGKQL 445
>Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (eIF4A-6) (eIF-4A-6)
(Fragment)
Length = 946
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 208/431 (48%), Gaps = 29/431 (6%)
Query: 49 RRNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTATKG 108
+R + E+ G N + ++A P+ I+S + T+D+ T+G
Sbjct: 538 QRQKSDDESGGDGNNKDSNSIA--PSAIAINSKK--------------KQTTKDIVTTQG 581
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
+F + L+ K ++PS + + I G DI+ ++ GT T C L
Sbjct: 582 AQF----ISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGIL 635
Query: 169 EKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPV 228
+++D Q ++LVPT +LA +T V LG+ L + GGTS +D L V
Sbjct: 636 QRLDYASTECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGV 695
Query: 229 HLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMF 288
+ VGTP +L + + M ++DEAD++L F+ + +I++LP Q F
Sbjct: 696 QVAVGTPCHVLGMLQGRALCPDHIRMFVLDEADEVLRG-FKDQIHGIIQFLPTKTQFGFF 754
Query: 289 SATFPVTVKEFKDKYLPKPYVINLMDELTLKGIT--QFYAFVE-ERQKVHCLNTLFSKLQ 345
SA+ E KY+ KP I + + L+GI QFY VE E K+ L LF ++
Sbjct: 755 SASMSHEALEMCRKYMNKPVEIIVPRDEELEGINVKQFYVNVEKEDCKLDKLCGLFDTME 814
Query: 346 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 405
I +SIIF N+ + + L +KI GY+ IH + Q R++ +F++G+ R L+ TDL
Sbjct: 815 ITRSIIFVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL 874
Query: 406 FTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 465
RGID+ I +D P YL V +SG+ G G+A++ IT D I++
Sbjct: 875 --RGIDVLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQKFC 931
Query: 466 GTEIKPIPPQI 476
T+I+ +P +
Sbjct: 932 NTQIEELPSNV 942
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 191/382 (50%), Gaps = 28/382 (7%)
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
+ FE+ L E++ + E G +P+ IQ +P L G+ ++ + G+GKT A+ +P +
Sbjct: 110 DSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLV 169
Query: 169 EKIDQEKNAI---------QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKD 219
+ + +++ + + V+L PTREL Q +V K + H + + + +GG+ ++
Sbjct: 170 QLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRP 229
Query: 220 DIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYL 279
L PV ++VGTPGRILD K G + D L++DEAD + F P + + + L
Sbjct: 230 QEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPL 289
Query: 280 ------PASR--QILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGI-TQFYAFVEE 330
P + Q ++ +AT V++ D+ +++L K + T + F++
Sbjct: 290 KNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEG--IVHLRTTTFQKRVATARHDFIKL 347
Query: 331 RQKVHCLNTLFSKLQI-----NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHR 385
+ L L L+ N+ ++FCN++N + +TE S H ++ + R
Sbjct: 348 SGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQISTVNYHGEVPAEER 407
Query: 386 NRVFHDFRN--GACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHL 443
+ FRN G C LVCTDL RG+D+ V+ VI FDFP + YLHR GR+ R G
Sbjct: 408 VENLNKFRNEEGDCPTLVCTDLAARGLDLD-VDHVIMFDFPSNSIDYLHRTGRTARMGAK 466
Query: 444 GLAVNLITYEDRFNLYRIEQEL 465
G +L+ +D RIE+ +
Sbjct: 467 GKVTSLVAKKDVTLATRIEEAM 488
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 181/364 (49%), Gaps = 37/364 (10%)
Query: 144 LTGSDILARAKNGTGKTAAFCIPALEKI---------DQEKNAI-------QVVILVPTR 187
L G D++A A+ G+GKTAAFC+P + + +E+++ + ++L PTR
Sbjct: 1 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 60
Query: 188 ELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGIC 247
ELA Q ++ K+ ++V+V GGT + + + L + +LV TPGR++D+ ++
Sbjct: 61 ELAAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKV 120
Query: 248 ILKDCSMLIMDEADKLLSPEFQPSVEQLIRYL----PASRQILMFSATFPVTVKEFKDKY 303
L+ L+MDEAD++L F+P + +++ + + RQ ++FSATFP ++ +
Sbjct: 121 SLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDF 180
Query: 304 LPKPYVINLMD------------ELTLKGITQFYAF-VEERQKVHCLNTLFSKLQINQSI 350
L I + EL G + Y + +RQ V N SKLQ ++
Sbjct: 181 LSNYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVAN---SKLQQPLTL 237
Query: 351 IFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 410
+F + + L + G+ IH Q R F+ G +V TD+ +RG+
Sbjct: 238 VFVETKREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGL 297
Query: 411 DIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 470
D+ V VIN+D PK+ E Y+HR+GR+GR G G A T D +L + EL TE K
Sbjct: 298 DVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDH-SLAKGLLELMTEAK 356
Query: 471 PIPP 474
P
Sbjct: 357 QDVP 360
>AK110107
Length = 671
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 178/369 (48%), Gaps = 24/369 (6%)
Query: 110 EFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 169
EF + L L+ I ++ P+P+Q+ SIPI + G D++A A+ G+GKT F P L
Sbjct: 181 EFTNPPLDDHLIRNIDLARYKIPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILS 240
Query: 170 KI-----------------DQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTT 212
+ Q K +IL PTREL Q ++ ++ V
Sbjct: 241 QAFQTGPSANPTAGGGGFGRQRKAYPTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVY 300
Query: 213 GGTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSV 272
GG + + ++ + LLV TPGR++DL ++G L++ L++DEAD++L F+P +
Sbjct: 301 GGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQI 360
Query: 273 EQLIRY--LP--ASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL--TLKGITQFYA 326
+++ +P RQ LMFSAT P ++ +L K Y+ + + T + ITQ
Sbjct: 361 RRIVEGEDMPNVQDRQTLMFSATSPRDIQMLARDFL-KDYIFLSVGRVGSTSENITQKVE 419
Query: 327 FVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRN 386
+VE+ K L + ++IF + + L+ + + IH Q R
Sbjct: 420 YVEDVDKRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERE 479
Query: 387 RVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLA 446
R FRNG C LV T + RG+DI V V+N+D P + Y+HR+GR+GR G+ G +
Sbjct: 480 RALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGNTGHS 539
Query: 447 VNLITYEDR 455
+R
Sbjct: 540 TAFFNRGNR 548
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 181/361 (50%), Gaps = 6/361 (1%)
Query: 120 LLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID-QEKNAI 178
L+ + + GF+ P+PIQ ++IPI L+G + A A G+GKT AF P L KI K +
Sbjct: 157 LVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIKPGSKEGV 216
Query: 179 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRI 238
+ VIL PTRELA QT++ CK+L K K + + T S + ++ +L+ TP R+
Sbjct: 217 KAVILCPTRELAAQTTRECKKLAKGRKFYIKLMTKDLSKSGNFKDMH--CDILISTPLRL 274
Query: 239 LDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQIL-MFSATFPVTVK 297
+K L L++DE+DKL F ++ +++ I +FSAT P +++
Sbjct: 275 DHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSIIRSLFSATLPDSIE 334
Query: 298 EFKDKYLPKPYVINLMDELTLKG-ITQFYAFV-EERQKVHCLNTLFSKLQINQSIIFCNS 355
+ + + + + I Q F E+ K+ L F++ +IF S
Sbjct: 335 TLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTEKGKLLALRQSFAESLNPPVLIFVQS 394
Query: 356 VNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAV 415
R + L K++ IHA + ++ R + R G L+ T++ RG+D + V
Sbjct: 395 KERAKELYKELAFDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVIARGMDFKGV 454
Query: 416 NVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKPIPPQ 475
N VIN+DFP++A Y+HR+GRSGR G G A+ T ED+ L I L + +P
Sbjct: 455 NCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLRNIANVLISSGCEVPSW 514
Query: 476 I 476
I
Sbjct: 515 I 515
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 202/424 (47%), Gaps = 62/424 (14%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE- 169
F++ L +L + +KG ++ +PIQ E+IP+ L G D++A+AK G+GKT A+ +P L
Sbjct: 94 FDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHE 153
Query: 170 --KIDQE----KNAIQVVILVPTRELALQTSQVCKELGKHL--KIQVMVTTGGTSLKDDI 221
K+ E K+A V ILVPTREL Q L + K++V+ S KD
Sbjct: 154 LLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEFCTSKLKVVQVNASMSDKDIK 213
Query: 222 IRLYQPVHLLVGTPGRILDLTKKGI----CILKDCSMLIMDEADKLLSPEFQPSVEQLIR 277
+ L P ++LV TP + KGI I + SM+I+DEAD LLS + ++ L+
Sbjct: 214 VALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKALVP 273
Query: 278 YLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLM------DELTLKGITQFYAFVEER 331
++P S Q ++ SAT +++ L P+++ L D+L K + QF+ + +
Sbjct: 274 HIPRSCQSILMSATSSADIEKLTKLLLHNPFILTLTEVGHAKDDLIPKNVQQFWISCDAK 333
Query: 332 QKVHCLNTLFSKLQINQS--IIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVF 389
K+ + L KL++ Q +IF NS++ L + + G ++A++ Q+ R +
Sbjct: 334 DKMLYILVLL-KLELIQKKVLIFVNSIDSAFKLRLFLEKFGIRSSVLNAELPQNSRLHII 392
Query: 390 HDFRNGACRNLVCTD---------------------------------LFTRGIDIQAVN 416
F L+ TD RGID + V
Sbjct: 393 QAFNARLFDYLIATDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVVRGIDFKNVF 452
Query: 417 VVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLIT------YEDRFNLYR-IEQELGTEI 469
V+N+D P Y+HRVGR+GR G +++L++ +ED N+ + +E + I
Sbjct: 453 TVVNYDMPPDPAGYVHRVGRTGRANKTGASISLVSPKENGIFEDIENMLKDVENRDTSCI 512
Query: 470 KPIP 473
P P
Sbjct: 513 SPFP 516
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/395 (28%), Positives = 184/395 (46%), Gaps = 31/395 (7%)
Query: 109 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 168
N ++ + L + KG + PIQ + + L G D++ RA+ G GKT AF +P L
Sbjct: 115 NALANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPIL 174
Query: 169 EKIDQEKNAIQ----------VVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 218
E + + V++L+PTRELA Q G + GG+ +
Sbjct: 175 ESLVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYR 234
Query: 219 DDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRY 278
+ + + V ++VGTPGR+ D +KG + ++DEAD++L+ F VE ++
Sbjct: 235 SQEMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGK 294
Query: 279 LP--ASRQILMFSATFPVTVKEFKDKYLPK-PYVINLMDELTLKGITQFYAFVEERQKVH 335
+ Q L+FSAT P VK+ ++L ++L+ + LK +
Sbjct: 295 VEDVTKVQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLA-----LP 349
Query: 336 CLNTLFSKLQINQSIIFCNSVNRVELL-------AKKITELGYSCFYIHAKMLQDHRNRV 388
C ++ Q+ II C S ++ A ++ L +H + Q R +
Sbjct: 350 CNRA--ARAQVIPDIIRCYSRGGRTIIFTETKESASDLSGLIAGSRALHGDVAQAQREVI 407
Query: 389 FHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVN 448
FR+G LV T++ RG+DI V ++I + P+ E Y+HR GR+GR G+ G+AV
Sbjct: 408 LAGFRSGKFLVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVM 467
Query: 449 LITYEDRFNLYRIEQELGTEIK----PIPPQIDQA 479
L +FN+ RIE+E G + + P P + Q+
Sbjct: 468 LFEPRYKFNVNRIERESGVKFEHISAPQPTDVAQS 502
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 193/428 (45%), Gaps = 65/428 (15%)
Query: 108 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA 167
FE+ L L+ + ++G P+ +Q +IPI D + ++ G+GKT A+ +P
Sbjct: 130 AKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPI 189
Query: 168 LEKI-----------DQEKNAIQVVILVPTRELALQ-TSQVCKELGKHLK--IQVMVTTG 213
L +I +++ ++ VI+ P+REL +Q +V K LG + K +Q +V
Sbjct: 190 LSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGA 249
Query: 214 GTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVE 273
S +++ ++ +P+ ++VGTPGRI +++ G C L++DE D+LLS ++ +
Sbjct: 250 NRSRQEEALKKNKPI-IVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMH 308
Query: 274 QLIRYLP-----------------ASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL 316
+++ ++ + RQ ++ SAT P +V + P ++ M +
Sbjct: 309 RILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVV 368
Query: 317 TLKGIT---------------------------------QFYAFVEERQKVHCLNTLFSK 343
L+ IT +Y + + KV L
Sbjct: 369 PLESITVPRPVLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHA 428
Query: 344 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 403
L+ I F N+ ++ + K+ G +H + + R+ V F++G R LV
Sbjct: 429 LEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTN 488
Query: 404 DLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQ 463
+L RG+D+ ++VIN D P + Y HR GR+GR G G V + + F + ++ +
Sbjct: 489 ELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRK 548
Query: 464 ELGTEIKP 471
+L IKP
Sbjct: 549 QLAVPIKP 556
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 116/488 (23%), Positives = 212/488 (43%), Gaps = 71/488 (14%)
Query: 50 RNQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTAT--K 107
+ + A G +S A+ P V +S A+ LP +T + +
Sbjct: 74 KKEKATRIGGPKPSSRASALKVKPKVSSFNSKP----AKSTLPKSAVVKKTLKIDESLFS 129
Query: 108 GNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPA 167
FE+ L L+ + ++G P+ +Q +IPI D + ++ G+GKT A+ +P
Sbjct: 130 AKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPI 189
Query: 168 LEKI-----------DQEKNAIQVVILVPTRELALQ-TSQVCKELGKHLK--IQVMVTTG 213
L +I +++ ++ VI+ P+REL +Q +V K LG + K +Q +V
Sbjct: 190 LSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGA 249
Query: 214 GTSLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVE 273
S +++ ++ +P+ ++VGTPGRI +++ G C L++DE D+LLS ++ +
Sbjct: 250 NRSRQEEALKKNKPL-IVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLSFNYREDMH 308
Query: 274 QLIRYLP-----------------ASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDEL 316
+++ ++ + RQ ++ SAT P +V + P ++ M +
Sbjct: 309 RILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVV 368
Query: 317 TLKGIT---------------------------------QFYAFVEERQKVHCLNTLFSK 343
L IT +Y + + KV L
Sbjct: 369 PLDSITVPRPVLSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVDTLRRCIHA 428
Query: 344 LQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCT 403
L+ I F N+ ++ + K+ G +H + + R+ V F++G R LV
Sbjct: 429 LEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTN 488
Query: 404 DLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQ 463
+L RG+D+ ++VIN D P + Y HR GR+GR G G V + + F + ++ +
Sbjct: 489 ELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRK 548
Query: 464 ELGTEIKP 471
+L IKP
Sbjct: 549 QLAVPIKP 556
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/424 (26%), Positives = 187/424 (44%), Gaps = 75/424 (17%)
Query: 120 LLMGIYEKGFERPSPIQEESIPIAL-TGSDILARAKNGTGKTAAFCIPALEKI--DQEK- 175
L+ + GF+ P+PIQ+ P A G D++ A+ G+GKT AF +P L+++ +QEK
Sbjct: 209 LITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEQEKA 268
Query: 176 -----------------NAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLK 218
+ ++ +IL PTRELA Q KE K L+IQV+ GG S++
Sbjct: 269 MRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSME 328
Query: 219 DDIIRLYQPVHLLVGTPGRILDLTKKG---ICILKDCSMLIMDEADKLLSPEFQPSVEQL 275
L + ++VGTPGR+ +L G + L S ++DEAD+++ ++ +
Sbjct: 329 KQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSI 388
Query: 276 IRYLPAS------------------------RQILMFSATFPVTV---KEFKD------- 301
I LP + RQ +FSAT ++ K+ K
Sbjct: 389 IEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGLVTAKA 448
Query: 302 ----------------KYLPKPYVINLMDELTL-KGITQFYAFVEERQKVHCLNTLFSKL 344
+ P +++L L + + + + + K L + S
Sbjct: 449 SASTDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVH 508
Query: 345 QINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTD 404
++IIFC S+ + L+ + LG + HA+M Q R + FR LV TD
Sbjct: 509 GQGRTIIFCTSIAALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATD 568
Query: 405 LFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQE 464
F RG+D V VI++ P + + Y+HR GR+ R G ++ LI+ D+ Y + +
Sbjct: 569 GFARGMDFDDVRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKS 628
Query: 465 LGTE 468
L E
Sbjct: 629 LSKE 632
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 189/400 (47%), Gaps = 36/400 (9%)
Query: 116 LKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ-- 173
L E++ + GF R +P+Q +IP+ L+ D+ A G+GKT AF +P +E + +
Sbjct: 30 LSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRRP 89
Query: 174 ---EKNAIQVVILVPTRELALQTSQVCKELGKHLK-IQVMVTTGGTSLKDDIIRLYQP-V 228
+ + + +I+ PTREL+ Q V + LK + M+ GG +K ++ +L +
Sbjct: 90 SPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEGA 149
Query: 229 HLLVGTPGRILDLTKKGICI-LKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILM 287
++LVGTPG++ D+ ++ + K+ +LI+DEAD+LL FQ + +I LP R+ +
Sbjct: 150 NILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTGL 209
Query: 288 FSATFPVTVKEFKDKYLPKPYVINLMDEL----------------TLKGITQFYAFVEER 331
FSAT VKE L P + + E+ T G+ Y E
Sbjct: 210 FSATQTEAVKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMICEAS 269
Query: 332 QKVHCLNTLFSKLQINQSIIF---CNSVNRVELLAKKITEL-GYSCFYIHAKMLQDHRNR 387
K L + + +++ C V+ ++ + L G H KM Q R +
Sbjct: 270 NKSSQLVDFLVQNNGKKIMVYFATCACVDYWAIVLPLLDSLKGSPIIPYHGKMKQGPREK 329
Query: 388 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLA- 446
F + LVCTD+ RG+DI V++++ +D P+ ++HR GR+ R+ G A
Sbjct: 330 ALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAI 389
Query: 447 VNLITYED-------RFNLYRIEQELGTEIKPIPPQIDQA 479
V L+ ED R + E+E T I PQI A
Sbjct: 390 VFLLPKEDTYVEFLKRRGVPLTERECSTNAVDIVPQIRSA 429
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 179/417 (42%), Gaps = 80/417 (19%)
Query: 111 FEDYFLKRELLMGIYEK-GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 169
F D L L + +K GF+ P+ IQ ++IP+A++G +L +A GTGKT A+ P +
Sbjct: 25 FTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVH 84
Query: 170 KIDQEKNAIQ------VVILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDII 222
+ + ++ ++LVPTREL LQ + ++L V GG + +
Sbjct: 85 LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKA 144
Query: 223 RLYQPVHLLVGTPGRILD-LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYL-- 279
RL + + +L+ TPGR+LD L + + ++ DEAD +L F ++E ++ +L
Sbjct: 145 RLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGS 204
Query: 280 -------------PASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDE----------- 315
P RQ L+ SAT V L P +I L ++
Sbjct: 205 RNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTS 264
Query: 316 ---------LTLKGITQFYA---------FVEERQKVHC----------LNTLFSKLQIN 347
L +T A V+ KV C L +LF + +
Sbjct: 265 LLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSH 324
Query: 348 QSIIFCNSVNRVELLAKKITELGYS-----------------CFYIHAKMLQDHRNRVFH 390
+ ++F ++ + V+ +++L +S F +H M QD R + F
Sbjct: 325 KVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFL 384
Query: 391 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAV 447
F + LV TD+ RG+D V +I +D P A Y+HRVGR+ R G G A+
Sbjct: 385 GFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 142/284 (50%), Gaps = 21/284 (7%)
Query: 67 KAVAQSPAVDGIDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEFEDYFLKRELLMGIYE 126
+A SP+ G S+ W + P+ V G E + ++ +
Sbjct: 50 RAFHGSPSPLGFRSTPASWSS-----PE----AGAAVGGDDGLEVARLGISPWIVERLAA 100
Query: 127 KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--DQEKNAIQ----V 180
+G R PIQ + A+ G D++ RA+ GTGKT AF IP +++I EKN
Sbjct: 101 RGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLA 160
Query: 181 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILD 240
+IL PTRELA QV KE + + + GG + + L V ++VGTPGRI+D
Sbjct: 161 IILAPTRELA---RQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIID 217
Query: 241 LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFK 300
L ++G+ L + +++DEAD++L+ F VE ++ LP +RQ ++FSAT P +++
Sbjct: 218 LLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKIT 277
Query: 301 DKYLPKPYVINLM---DELTLKGITQFYAFVEERQKVHCLNTLF 341
KYL P +I+L+ D+ +GI+ + E K L L
Sbjct: 278 SKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLI 321
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 168/366 (45%), Gaps = 42/366 (11%)
Query: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
F++ E+L + GF RPS IQ + L G + ++G+GKT A+ P ++
Sbjct: 254 FKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN 313
Query: 171 IDQEK---------NAIQVVILVPTRELALQTSQVCKELGKH-LKIQVMVTTGGTSLKDD 220
+ +E+ +VV+L PT ELA Q C+ + K + + MV TGG K
Sbjct: 314 LRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQ 373
Query: 221 IIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPE-FQPSVEQLIRYL 279
+ L Q + +L+ TPGR L L ++G L + +++DE D L E F+ + QLI
Sbjct: 374 LESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLITVA 433
Query: 280 PASRQILMFSATFPV-----TVKEFKD-KYLPKPYVINLMDELTLKGITQFYAFVEER-- 331
P + Q L +AT P+ V+ F D + + P V L + EE+
Sbjct: 434 PLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEKNP 493
Query: 332 -----QKVHCLNTLFSKLQINQSIIFCNSVN----------RVELLAKKITELGYSCFYI 376
K L + + + ++IIFCN + RV+ A +I L +
Sbjct: 494 ETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPF----- 548
Query: 377 HAKMLQDHRNRVFHDFRNGACRN---LVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHR 433
HA + Q R +F N + LVCTD +RGID VN V+ FD+P+ Y+ R
Sbjct: 549 HAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRR 608
Query: 434 VGRSGR 439
VGR+ R
Sbjct: 609 VGRTAR 614
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 6/183 (3%)
Query: 123 GIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQ----EKNAI 178
I + + + IQ SIP + GSD++A AK G+GKT AF IPA+E + + +N
Sbjct: 100 AIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCRLRFSPRNGT 159
Query: 179 QVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRI 238
V++L PTRELA+QT V KEL ++ + GG L+ + +L + +++LV TPGR+
Sbjct: 160 GVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAKGINVLVATPGRL 219
Query: 239 LDLTKKGICILKDC-SMLIMDEADKLLSPEFQPSVEQLIRYLP-ASRQILMFSATFPVTV 296
LD +K +C LI+DEAD++L F+ ++Q+ + LP RQ ++FSAT V
Sbjct: 220 LDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQTVLFSATQTEKV 279
Query: 297 KEF 299
++F
Sbjct: 280 EDF 282
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 255 LIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINL-- 312
L +DEAD+L+ F+ + ++ + A RQ L+FSAT P ++ F L KP ++N+
Sbjct: 22 LTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNVGR 81
Query: 313 MDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYS 372
L I + EE + ++ L L + ++FC V+ + + + G
Sbjct: 82 AGAANLDVIQEVEYVKEEARIIYLLECL--QKTPPPVLVFCEHKADVDYIQEFLLLKGVE 139
Query: 373 CFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLH 432
IH + R F F+ LV TD+ ++G+DI + VIN+D P E Y+H
Sbjct: 140 AVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIENYVH 199
Query: 433 RVGRSGRFGHLGLAVNLIT 451
R+GR+GR G G+A I
Sbjct: 200 RIGRTGRRGKTGVATTFIN 218
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 181 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILD 240
++L PTRELA QV +E ++ + GGT + I +L V +++GTPGR++D
Sbjct: 14 IVLAPTRELA---KQVEREFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGRVID 70
Query: 241 LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFK 300
L K+G L + +++DEAD++LS F VE ++ +P RQ LMFSAT P ++
Sbjct: 71 LLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATMPTWIQRLT 130
Query: 301 DKYLPKPYVINLMDELTLKGITQFY 325
KYL P I+L+ + K + ++
Sbjct: 131 QKYLKNPVTIDLVSFILAKLLCSWF 155
>Os07g0517000 DEAD/DEAH box helicase domain containing protein
Length = 524
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 6/180 (3%)
Query: 273 EQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTL---KGITQFYAFVE 329
+ ++ LP RQ L+FSAT +VK+ L P I++ +E T + Q+ V
Sbjct: 1 DNVVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAMIVP 60
Query: 330 ERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITEL--GYSCFYIHAKMLQDHRNR 387
QK++ L + + ++ ++F +SV +V+ + + +L G S +H +M + +
Sbjct: 61 LEQKLNMLWSFIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQA 120
Query: 388 VFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAV 447
+ +F+ G L TD+F RG+DI+ V+ V+ D P+ Y+HRVGR+ R+ G A+
Sbjct: 121 IVAEFKEGHSV-LFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKAL 179
>AK068197
Length = 181
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 3/165 (1%)
Query: 249 LKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFKDKYLPKPY 308
L+ + L++DEAD++L F+P + +++ + RQ L +SAT+P V+ ++L PY
Sbjct: 5 LRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPY 64
Query: 309 --VINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSI-IFCNSVNRVELLAKK 365
+I D I Q + E +K L+ L S L I IF + + + ++
Sbjct: 65 KVIIGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQ 124
Query: 366 ITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGI 410
+ G+ IH Q R+ V +F++G + TD+ RG+
Sbjct: 125 LRMDGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 169
>AK063048
Length = 250
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 341 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 400
FSK +I+F N+ ++L+ + IH+ M Q R F++ L
Sbjct: 53 FSK----STIVFTNTCRDCQILSMMCRKFHMPSVEIHSLMKQRQRIASLAKFKSLQVPIL 108
Query: 401 VCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR 460
TD+ +RG+DI +V+++IN + P + Y+HRVGR+ R G G A+ L+T D +++
Sbjct: 109 FATDVASRGLDIPSVDLIINHNVPFVPKEYVHRVGRTARAGRCGTAITLVTQYDVKLMHK 168
Query: 461 IEQELGTEI 469
IE +G ++
Sbjct: 169 IEDRVGKQL 177
>Os02g0201900 DEAD/DEAH box helicase domain containing protein
Length = 124
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 376 IHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVG 435
IH + R F G +VCT + RG+D+ V VI FD P + + Y+H+VG
Sbjct: 2 IHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVG 61
Query: 436 RSGRFGHLGLAVNLITYEDRFNLYR-IEQELGTEIKPIPPQIDQAIY 481
R+ R G G+A+ + EDR NL+R + Q L T PIP ++ + Y
Sbjct: 62 RASRMGVEGMAIVFVNEEDR-NLFRELVQILKTAGAPIPRELANSKY 107
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,407,122
Number of extensions: 579788
Number of successful extensions: 1585
Number of sequences better than 1.0e-10: 53
Number of HSP's gapped: 1457
Number of HSP's successfully gapped: 57
Length of query: 483
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 378
Effective length of database: 11,553,331
Effective search space: 4367159118
Effective search space used: 4367159118
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)