BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0572900 Os02g0572900|AK071320
(384 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0572900 Zinc finger, C2H2-type domain containing protein 479 e-135
Os01g0871200 Zinc finger, C2H2-type domain containing protein 222 3e-58
Os08g0562300 Zinc finger, C2H2-type domain containing protein 214 7e-56
Os04g0165200 Zinc finger, C2H2-type domain containing protein 213 1e-55
Os03g0838800 Zinc finger, C2H2-type domain containing protein 207 1e-53
Os12g0170400 Zinc finger, C2H2-type domain containing protein 194 7e-50
Os01g0195000 Zinc finger, C2H2-type domain containing protein 98 8e-21
Os09g0307400 98 9e-21
Os01g0935000 Zinc finger, C2H2-type domain containing protein 98 9e-21
Os02g0518500 97 3e-20
Os10g0419200 Zinc finger, C2H2-type domain containing protein 95 8e-20
Os09g0282300 Similar to WIP1 protein (Fragment) 92 5e-19
Os01g0242200 Zinc finger, C2H2-type domain containing protein 92 6e-19
Os08g0554400 Zinc finger, C2H2-type domain containing protein 91 1e-18
Os01g0859100 Similar to WIP1 protein (Fragment) 91 2e-18
AK067268 91 2e-18
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 89 4e-18
Os04g0566400 Zinc finger, C2H2-type domain containing protein 88 9e-18
Os09g0555700 Zinc finger, C2H2-type domain containing protein 88 1e-17
Os02g0672100 Zinc finger, C2H2-type domain containing protein 87 2e-17
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 86 4e-17
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 85 7e-17
Os03g0197700 Zinc finger, C2H2-type domain containing protein 85 8e-17
Os01g0572300 Zinc finger, C2H2-type domain containing protein 83 3e-16
Os09g0449400 Zinc finger, C2H2-type domain containing protein 77 3e-14
Os08g0504000 Similar to WIP5 protein 67 2e-11
Os09g0485600 Similar to WIP1 protein (Fragment) 65 7e-11
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 479 bits (1234), Expect = e-135, Method: Compositional matrix adjust.
Identities = 228/235 (97%), Positives = 228/235 (97%)
Query: 150 AAKGDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPG 209
AAKGDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPG
Sbjct: 150 AAKGDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPG 209
Query: 210 QPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKR 269
QPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKR
Sbjct: 210 QPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKR 269
Query: 270 FAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGVXXXXX 329
FAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGV
Sbjct: 270 FAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGVATAAA 329
Query: 330 XXSISMMEEGGVEANCDREEDEEGGFDPKFFQEWMEELRGGAVAPNWSAPSEAGH 384
SISMMEEGGVEANCDREEDEEGGFDPKFFQEWMEELRGGAVAPNWSAPSEAGH
Sbjct: 330 EASISMMEEGGVEANCDREEDEEGGFDPKFFQEWMEELRGGAVAPNWSAPSEAGH 384
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 98/164 (59%), Positives = 127/164 (77%), Gaps = 3/164 (1%)
Query: 155 GDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPP 214
G Y V++L+ E+LA H HFC ICGKGF+RDANLRMHMR HGD +KT AL++P +
Sbjct: 264 GSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSL 323
Query: 215 AGREV-RFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVL 273
V R+SCPY GC RN+ H++F+PLK+ +C +NH++RSHC K Y C RC KK F+V+
Sbjct: 324 ESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKK-FSVI 382
Query: 274 ADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAI 317
ADL++H +HCG + +W CSCGTTFSRKDKLFGH+ALF+GHTPA+
Sbjct: 383 ADLKTHEKHCGRD-KWLCSCGTTFSRKDKLFGHVALFQGHTPAL 425
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 126/165 (76%), Gaps = 8/165 (4%)
Query: 159 VVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGRE 218
++ELDA+ELLA++ H+C +CGKGF+RDANLRMHMRAHGD +K+ ALS P + G E
Sbjct: 190 IIELDAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDE 249
Query: 219 V------RFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAV 272
++SCP GC NR H +F+PLKS +CA+NH++RSHCPK+Y C RC G+K F+V
Sbjct: 250 TMAAAARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRC-GRKHFSV 308
Query: 273 LADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAI 317
L+DLR+H +HCG+ +W CSCGT+FSRKDKL GH++LF GH P +
Sbjct: 309 LSDLRTHEKHCGDH-RWLCSCGTSFSRKDKLIGHVSLFAGHQPVM 352
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 104/166 (62%), Positives = 123/166 (74%), Gaps = 3/166 (1%)
Query: 156 DYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPA 215
+ DVVEL+AS LLA + H+C +CGKGF+RDANLRMHMRAHGD +KT AL+ G A
Sbjct: 186 EVDVVELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAA 245
Query: 216 GREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLAD 275
R +SCP GC NR H RF+ LKS VCA+NH+RRSHCPK+Y C RCGGK+ FAVL+D
Sbjct: 246 ARRCSYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQ-FAVLSD 304
Query: 276 LRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALF-EGHTPAIAEP 320
LR+H +HCG E +W CSCGT FSRKDKL GH+ALF GH P P
Sbjct: 305 LRTHEKHCG-ELRWLCSCGTFFSRKDKLMGHVALFAAGHAPVPVAP 349
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 128/170 (75%), Gaps = 9/170 (5%)
Query: 155 GDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPG--QPK 212
G Y+VV+++ E+LA HVHFC +CGKGF+RDANLRMHMR HG+ +K+ AL++PG +
Sbjct: 146 GSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSPSR 205
Query: 213 PPAGREVR-----FSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGK 267
PA + +SCPY GC RNR H+ F+PLK+ C +NH+RRSHC K + C RC
Sbjct: 206 SPAAADAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRC-NV 264
Query: 268 KRFAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAI 317
KRF+V+ADLR+H +HCG + +W CSCGT+FSRKDKLF H+A+F+GH+PA+
Sbjct: 265 KRFSVVADLRTHEKHCGRD-RWVCSCGTSFSRKDKLFAHVAIFDGHSPAL 313
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 123/163 (75%), Gaps = 6/163 (3%)
Query: 159 VVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGRE 218
V++L+ E+LA H HFC ICGKGF+RDANLRMHMR HGD +K+ AL++P P +
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274
Query: 219 V----RFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLA 274
R+SCP+AGC RNR H F+PLK+ +C +NH++RSHC K + C RCG KRF+V+A
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGA-KRFSVMA 333
Query: 275 DLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAI 317
DL++H +HCG + +W CSCGT+FSRKDKLF H+ALF+GH PA+
Sbjct: 334 DLKTHEKHCGRD-RWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 12/156 (7%)
Query: 154 DGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKP 213
D + +V+ L L+A + + C+ICGKGF+RD NL++H R H +K + PK
Sbjct: 55 DPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWKL-----KQRNPKE 109
Query: 214 PAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVL 273
++V + CP AGC H R L + HF R H K + C++C KR+AV
Sbjct: 110 VVRKKV-YVCPEAGCVH---HDPARALGDLTGIKKHFSRKHGEKKWKCDKC--SKRYAVH 163
Query: 274 ADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
+D ++H + CG ++RC CGT FSR+D H A
Sbjct: 164 SDWKAHSKVCGTR-EYRCDCGTLFSRRDSFITHRAF 198
>Os09g0307400
Length = 385
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/164 (39%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 163 DASELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFK----TLDALSRPGQPKPPAG- 216
A+E+L F C +C K F R N++MHM HG +++ +L G PPA
Sbjct: 177 SAAEILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAITVGGAAPPASL 236
Query: 217 REVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADL 276
+ C GC N H R RPLK + H+RR H + YAC RCG KRFAV D
Sbjct: 237 MRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG--KRFAVRGDW 294
Query: 277 RSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALF-EGHTPAIAE 319
R+H ++CG+ W C CG+ F K L H+ F GH P I E
Sbjct: 295 RTHEKNCGK--LWFCVCGSDFKHKRSLKDHVRSFGGGHAPHIVE 336
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 10/199 (5%)
Query: 154 DGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKP 213
D +VV L LLA + C+ICGKGF+RD NL++H R H +K G
Sbjct: 62 DPSAEVVALSPRTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGGAGGGGGG 121
Query: 214 PAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVL 273
R+ + CP A C H R L + HF R H K + C+RCG KR+AV
Sbjct: 122 EPPRKRVYVCPEASCVH---HSPSRALGDLTGIKKHFCRKHGEKKWKCDRCG--KRYAVH 176
Query: 274 ADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGVXXXXXXXSI 333
+D ++H + CG +++C CGT FSR+D H A + A+A+ N + ++
Sbjct: 177 SDWKAHSKVCGTR-EYKCDCGTVFSRRDSFVTHRAFCD----ALAQENNKLAQPMNMAAV 231
Query: 334 SMMEEGGVEANCDREEDEE 352
+ +G +A+ +D++
Sbjct: 232 TSALQGQQQAHHPVADDDD 250
>Os02g0518500
Length = 492
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 79/156 (50%), Gaps = 13/156 (8%)
Query: 154 DGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKP 213
D D +VV L LLA + + C++C KGF+RD NL++H R H +K Q
Sbjct: 47 DPDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKL-------KQRSS 99
Query: 214 PAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVL 273
++ + CP C H R L + H+ R H K + C+RC K++AV
Sbjct: 100 TEAKKKVYVCPEITCPH---HDATRALGDLTGIKKHYSRKHGEKKWKCDRCS--KKYAVQ 154
Query: 274 ADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
+D ++H + CG + ++RC CGT FSRKD H A
Sbjct: 155 SDWKAHTKICGTK-EYRCDCGTIFSRKDSFITHRAF 189
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 154 DGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKT--LDALSRPGQP 211
D + +V+ L L+A + C++C KGF+RD NL++H R H +K A
Sbjct: 20 DPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTT 79
Query: 212 KPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFA 271
PA R+ + CP C H R L + HF R H K + CERCG KR+A
Sbjct: 80 AAPAPRKRVYVCPEPTCVH---HDPARALGDLTGIKKHFSRKHGEKRWRCERCG--KRYA 134
Query: 272 VLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
V +D ++H+++CG ++RC CG FSRKD L H A
Sbjct: 135 VHSDWKAHVKNCGTR-EYRCDCGILFSRKDSLLTHRAF 171
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 77/147 (52%), Gaps = 7/147 (4%)
Query: 165 SELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSC 223
+++L HF C +C K F R NL+MHM HG +++ R QP A + C
Sbjct: 146 TQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPA--AMLRLPCFC 203
Query: 224 PYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHC 283
AGC N H R RPLK + H++R HC K +AC +CG K AV D R+H ++C
Sbjct: 204 CAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG--KPLAVRGDWRTHEKNC 261
Query: 284 GEEAQWRCSCGTTFSRKDKLFGHLALF 310
G +W C+CG+ F K L H+ F
Sbjct: 262 GR--RWHCACGSDFKHKRSLKDHIRAF 286
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 154 DGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKP 213
D + +V+ L L+A + C+ICGKGF+RD NL++H R H + P + +
Sbjct: 42 DPEAEVIALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGH----------NLPWKLRQ 91
Query: 214 PAGREVR---FSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRF 270
+G+E R + CP C H R L + HF R H K + C++C KR+
Sbjct: 92 RSGKEPRKRVYVCPEKSCVH---HNPSRALGDLTGIKKHFCRKHGEKKWKCDKC--SKRY 146
Query: 271 AVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
AV +D ++H + CG ++RC CGT FSR+D H A
Sbjct: 147 AVQSDWKAHSKTCGTR-EYRCDCGTLFSRRDSFITHRAF 184
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 156 DYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPA 215
D +VV L LLA + C++C KGF+R+ NL++H R H +K Q P
Sbjct: 53 DAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLK-------QKNPKE 105
Query: 216 GREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLAD 275
R + CP C H R L + H+ R H K + C++C KR+AV +D
Sbjct: 106 TRRRVYLCPEPSCVH---HDPSRALGDLTGIKKHYSRKHGEKKWKCDKC--NKRYAVQSD 160
Query: 276 LRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
++H + CG ++RC CGT FSR+D H A
Sbjct: 161 WKAHSKTCGTR-EYRCDCGTLFSRRDSFITHRAF 193
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 165 SELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFK----TLDALSRPGQPKPPAGREV 219
+++L V F C +C K F R N++MHM HG ++ +L K P
Sbjct: 207 AQILVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQTLAMLKLPC---- 262
Query: 220 RFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSH 279
C AGC N AH R RPLK + H++R H K + C RC K FAV D R+H
Sbjct: 263 --YCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCA--KPFAVKGDWRTH 318
Query: 280 LRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAE 319
++CG+ +W C+CG+ F K L H+ F H +AE
Sbjct: 319 EKNCGK--RWFCACGSDFKHKRSLNDHVRSFGAHHLPVAE 356
>AK067268
Length = 324
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 13/154 (8%)
Query: 156 DYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPA 215
D +VV L LLA + C++C KGF+R+ NL++H R H +K Q P
Sbjct: 53 DAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL-------KQKNPKE 105
Query: 216 GREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLAD 275
R + CP C H R L + + H+ R H K + C++C KR+AV +D
Sbjct: 106 TRRRVYLCPEPSCVH---HDPSRALGNLTGIKKHYSRKHGEKKWKCDKCN--KRYAVQSD 160
Query: 276 LRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
++H + CG ++RC CGT FSR+D H A
Sbjct: 161 WKAHSKTCGTR-EYRCDCGTLFSRRDSFITHRAF 193
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 165 SELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRF-KTLDALSRPGQPKPPAGREVRFS 222
+++L V F C +C K F R N++MHM HG + K ++L A ++
Sbjct: 202 AQILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLKLPCY 261
Query: 223 CPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRH 282
C AGC N H R RPLK + H++R H K +AC RC K FAV D R+H ++
Sbjct: 262 CCAAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCA--KPFAVKGDWRTHEKN 319
Query: 283 CGEEAQWRCSCGTTFSRKDKLFGHLALF-EGHTPA 316
CG+ +W C+CG+ F K L H+ F GH P
Sbjct: 320 CGK--RWFCACGSDFKHKRSLNDHVRSFGGGHFPV 352
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 153 GDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPK 212
D D +V+ L LLA + C++C KGF+R+ NL++H R H +K P Q
Sbjct: 77 ADPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ--KNPAQ-- 132
Query: 213 PPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAV 272
A R + CP C H R L + HF R H K + C++C KR+AV
Sbjct: 133 --AQRRRVYLCPEPTCVH---HDPARALGDLTGIKKHFCRKHGEKKWKCDKC--SKRYAV 185
Query: 273 LADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
+D ++H + CG ++RC CGT FSR+D H A
Sbjct: 186 QSDWKAHSKICGTR-EYRCDCGTLFSRRDSFITHRAF 221
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 156 DYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPA 215
D +V+ L L+A + C++C KGF+R+ NL++H R H +K Q P
Sbjct: 59 DAEVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLK-------QKNPKE 111
Query: 216 GREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLAD 275
R + CP C H R L + H+ R H K + C++C KR+AV +D
Sbjct: 112 ARRRVYLCPEPSCVH---HDPSRALGDLTGIKKHYCRKHGEKKWRCDKC--SKRYAVQSD 166
Query: 276 LRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
++H + CG ++RC CGT FSR+D H A
Sbjct: 167 WKAHSKTCGTR-EYRCDCGTLFSRRDSFITHRAF 199
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 154 DGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKP 213
D D +V+ L LLA + C++C KGF+R+ NL++H R H +K Q P
Sbjct: 76 DPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL-------KQKNP 128
Query: 214 -PAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAV 272
A R + CP C H R L + HF R H K + C++C KR+AV
Sbjct: 129 LQAQRRRVYLCPEPTCVH---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKC--SKRYAV 183
Query: 273 LADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
+D ++H + CG ++RC CGT FSR+D H A
Sbjct: 184 QSDWKAHSKICGTR-EYRCDCGTLFSRRDSFITHRAF 219
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 165 SELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSC 223
S++L F C +C K F R N++MHM HG +++ R QP A + C
Sbjct: 269 SQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPT--AMLRLPCYC 326
Query: 224 PYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHC 283
AGC N H R RPLK + H++R H K + C +CG K FAV D R+H ++C
Sbjct: 327 CAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG--KAFAVRGDWRTHEKNC 384
Query: 284 GEEAQWRCSCGTTFSRKDKLFGHLALF 310
G+ W C+CG+ F K L H+ F
Sbjct: 385 GK--LWYCACGSDFKHKRSLKDHIRAF 409
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 164 ASELLAEHVHF-CDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFS 222
A+++LA F C +C K F R NL+MHM HG +++ + G +P A +
Sbjct: 50 AAQILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAALRG-AQPTAMLRLPCY 108
Query: 223 CPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRH 282
C AGC + H R RPLK + H+RR H + +AC RC KRFAV D R+H ++
Sbjct: 109 CCAAGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRCA--KRFAVRGDWRTHEKN 166
Query: 283 CGEEAQWRCSCGTTFSRKDKL 303
CG WRC+CG F K L
Sbjct: 167 CGR--LWRCACGAHFRHKRSL 185
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 19/150 (12%)
Query: 153 GDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPK 212
D D +V+ L LLA + C+IC KGF+RD NL++H R H + P + +
Sbjct: 22 ADPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGH----------NLPWKLR 71
Query: 213 PPAGREVR---FSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKR 269
+G+EVR + CP C H R L + HF R H K + C++C K+
Sbjct: 72 QRSGKEVRKRVYVCPEPTCVH---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKCS--KK 126
Query: 270 FAVLADLRSHLRHCGEEAQWRCSCGTTFSR 299
+AV +D ++H + CG ++RC CGT FSR
Sbjct: 127 YAVQSDWKAHTKTCGSR-EYRCDCGTLFSR 155
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 168 LAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSCPYAG 227
+A + C+ICGKGF+RD NL++H R H +K S+ A R+ + CP A
Sbjct: 1 MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSK------EAVRKKVYICPEAS 54
Query: 228 CNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHCGEEA 287
C H R L + HF R H K + C++C K++AV +D ++H + CG
Sbjct: 55 CVH---HDPSRALGDLTGIKKHFFRKHGEKKWKCDKC--SKKYAVHSDWKAHSKICGTR- 108
Query: 288 QWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGV 324
+++C CGT FSR+D H A + T A+ G+
Sbjct: 109 EYKCDCGTIFSRRDSFITHRAFCDALTEESAKAIGGI 145
>Os09g0449400 Zinc finger, C2H2-type domain containing protein
Length = 164
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 153 GDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPK 212
D D +VV L LL + C+IC +GF+RD NL+MH R H +K L +
Sbjct: 29 ADPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK------REA 82
Query: 213 PPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHC-PKLYACERCGGKKRFA 271
A R+ F CP C H L V + HFRR H + +AC RC K +A
Sbjct: 83 GEAARKRVFVCPEPTCLH---HDPSHALGDLVGIKKHFRRKHSGHRQWACARCS--KAYA 137
Query: 272 VLADLRSHLRHCGEEAQWRCSCGTTFSR 299
V +D ++HL+ CG C CG FSR
Sbjct: 138 VHSDYKAHLKTCGTRGH-SCDCGRVFSR 164
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 188 LRMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCAR 247
++MHM HG +++ R QP A + C AGC N H R RPLK +
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPT--AMLRLPCYCCAAGCRNNIDHPRARPLKDFRTLQ 58
Query: 248 NHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHL 307
H++R H K + C +CG K FAV D R+H ++CG+ W C CG+ F K L H
Sbjct: 59 THYKRKHGLKPFLCRKCG--KAFAVKGDWRTHEKNCGK--LWYCLCGSEFKHKRSLKDHA 114
Query: 308 ALF 310
F
Sbjct: 115 RAF 117
>Os09g0485600 Similar to WIP1 protein (Fragment)
Length = 154
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 60/122 (49%), Gaps = 6/122 (4%)
Query: 189 RMHMRAHGDRFKTLDALSRPGQPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARN 248
+MHM HG +++ R QP A + C AGC N H R +PLK +
Sbjct: 1 QMHMWGHGSQYRKGPESLRGIQPT--AMLRLPCYCCAAGCRNNIDHPRAKPLKDFRTLQT 58
Query: 249 HFRRSHCPKLYACERCGGKKRFAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLA 308
H++R H K + C +CG K FAV D R+H ++CG+ W C CG+ F K L H
Sbjct: 59 HYKRKHGLKPFLCRKCG--KAFAVKGDWRTHEKNCGK--LWYCLCGSEFKHKRSLKDHAR 114
Query: 309 LF 310
F
Sbjct: 115 AF 116
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,160,651
Number of extensions: 438261
Number of successful extensions: 1304
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1226
Number of HSP's successfully gapped: 28
Length of query: 384
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 281
Effective length of database: 11,657,759
Effective search space: 3275830279
Effective search space used: 3275830279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)