BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0256800 Os02g0256800|Os02g0256800
(126 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0256800 Cupredoxin domain containing protein 214 1e-56
Os02g0257100 Cupredoxin domain containing protein 119 4e-28
Os03g0850900 Similar to Chemocyanin precursor (Basic blue p... 103 2e-23
Os03g0709300 Similar to Chemocyanin precursor (Basic blue p... 103 2e-23
Os03g0259100 Similar to Basic blue protein (Cusacyanin) (Pl... 94 2e-20
Os03g0709100 Similar to Basic blue protein (Cusacyanin) (Pl... 91 2e-19
Os04g0422200 87 3e-18
Os02g0731400 Similar to Chemocyanin precursor (Basic blue p... 87 4e-18
Os08g0138100 83 4e-17
Os03g0807500 Cupredoxin domain containing protein 81 1e-16
Os08g0138200 Cupredoxin domain containing protein 81 1e-16
Os09g0469300 Cupredoxin domain containing protein 81 2e-16
Os08g0137800 Cupredoxin domain containing protein 80 3e-16
Os08g0482600 Plastocyanin-like domain containing protein 79 1e-15
Os04g0545600 Similar to Uclacyanin 3-like protein 78 2e-15
Os08g0137900 Similar to Chemocyanin precursor (Basic blue p... 75 1e-14
Os07g0165900 74 2e-14
Os03g0791300 72 7e-14
AY569612 72 8e-14
Os02g0653200 Plastocyanin-like domain containing protein 72 8e-14
Os08g0138400 Plastocyanin-like domain containing protein 72 8e-14
Os09g0572700 Cupredoxin domain containing protein 72 9e-14
Os03g0791366 72 9e-14
Os06g0266300 72 1e-13
Os11g0428800 Plastocyanin-like domain containing protein 71 2e-13
Os12g0150500 Cupredoxin domain containing protein 70 4e-13
Os06g0218600 Cupredoxin domain containing protein 70 5e-13
Os08g0137400 Cupredoxin domain containing protein 69 7e-13
AK068398 69 8e-13
Os07g0105000 Cupredoxin domain containing protein 65 1e-11
Os04g0545400 Plastocyanin-like domain containing protein 63 4e-11
Os02g0758800 Cupredoxin domain containing protein 62 9e-11
>Os02g0256800 Cupredoxin domain containing protein
Length = 126
Score = 214 bits (545), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/126 (85%), Positives = 108/126 (85%)
Query: 1 MARGSXXXXXXXXXXXXXXXXXXVVHGEDWAVGDNKGWSFGVAGWENGKRIQPGDELVFK 60
MARGS VVHGEDWAVGDNKGWSFGVAGWENGKRIQPGDELVFK
Sbjct: 1 MARGSAAAPGLLLALCCAAAAIAVVHGEDWAVGDNKGWSFGVAGWENGKRIQPGDELVFK 60
Query: 61 YDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
YDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV
Sbjct: 61 YDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
Query: 121 AVTANA 126
AVTANA
Sbjct: 121 AVTANA 126
>Os02g0257100 Cupredoxin domain containing protein
Length = 122
Score = 119 bits (299), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/93 (60%), Positives = 66/93 (70%)
Query: 29 DWAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVY 88
+W VGD+KGW+FGVAGWENGK + GD LVFKY +HNV++VD AGY GC V K Y
Sbjct: 28 EWHVGDDKGWTFGVAGWENGKAFKVGDVLVFKYSPMMHNVLQVDHAGYDGCKVGAGDKKY 87
Query: 89 NSGDDRIKLAGGEAFFICSIRDHCTAGMKVKVA 121
SG+DRI LA G+ FFIC HC GMK+ VA
Sbjct: 88 ASGNDRITLAAGKVFFICGFPGHCANGMKIAVA 120
>Os03g0850900 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 125
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 61/93 (65%), Gaps = 3/93 (3%)
Query: 30 WAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGP--SKV 87
+ VGD GW G W NGKR + GD LVFKYD+ HNVV V+ AGY GCT P +KV
Sbjct: 31 FTVGDRGGWGMGAGSWANGKRFKAGDVLVFKYDSSAHNVVAVNAAGYKGCTAA-PRGAKV 89
Query: 88 YNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
Y SG+DR+ LA G +FIC+ HC AGMK+ V
Sbjct: 90 YKSGNDRVTLARGTNYFICNFPGHCQAGMKIAV 122
>Os03g0709300 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 129
Score = 103 bits (258), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 24 VVHGED-----WAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGG 78
++HGE + VGD GW F GW GKR + GD LVFKY HNVV V+ AGY
Sbjct: 25 LLHGELAESAVYTVGDRGGWGFNSGGWLRGKRFRAGDVLVFKYSPSAHNVVAVNAAGYKS 84
Query: 79 CTVTGPSKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
C+ +KVY SG DR+ LA G +FICS HC AGMK+ V
Sbjct: 85 CSAPRGAKVYKSGSDRVTLARGTNYFICSFPGHCQAGMKIAV 126
>Os03g0259100 Similar to Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)
Length = 120
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 35 NKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDR 94
N WSFG W GK + GD LVF YD +HNVV VD GY GC +G Y+SG+DR
Sbjct: 34 NVDWSFGADSWSKGKNFRAGDVLVFSYDPSVHNVVAVDAGGYSGCRESGTK--YSSGNDR 91
Query: 95 IKLAGGEAFFICSIRDHCTAGMKVKVAVT 123
I L G ++FICS HC AGMK+ V +
Sbjct: 92 ITLGRGTSYFICSFSGHCGAGMKMAVTAS 120
>Os03g0709100 Similar to Basic blue protein (Cusacyanin) (Plantacyanin) (CBP)
Length = 131
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 56/97 (57%)
Query: 24 VVHGEDWAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTG 83
V + VGD+ GWS G W +GK+ GD LVF+Y +HNVV VD GY C
Sbjct: 32 VADAATYYVGDSLGWSLGSGSWPSGKKFHAGDILVFRYLPWMHNVVAVDEDGYADCNPPP 91
Query: 84 PSKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
S+ Y SG D ++LA G+ FF+C+ HC GMK+ V
Sbjct: 92 FSRYYTSGSDSVRLARGDNFFVCTRYGHCNLGMKMVV 128
>Os04g0422200
Length = 137
Score = 87.0 bits (214), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 28 EDWAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKV 87
+W VGD GWS GV GW N K + GD LVF YDA HNVV V Y C +
Sbjct: 41 REWPVGDGAGWSPGVVGWPNYKPFKAGDVLVFSYDASAHNVVVVGDVDYALCRAPANATA 100
Query: 88 YNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKVAVTAN 125
Y SGDDR+ L G FF+ C GM +K+AVTA
Sbjct: 101 YGSGDDRVALPPGVTFFVSGFPGDCDKGM-MKIAVTAR 137
>Os02g0731400 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 134
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%)
Query: 30 WAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYN 89
+ VGD+ GW F GW GK + GD L FKY+A +H+V VD A Y CTV +
Sbjct: 41 YTVGDSSGWRFYAEGWAKGKTFRAGDVLEFKYNAVVHDVAAVDLAAYRSCTVPKGVRKMR 100
Query: 90 SGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
SG D++ L G +FIC+ HC AGMK+ V
Sbjct: 101 SGRDKVTLRKGTHYFICTEPGHCKAGMKLAV 131
>Os08g0138100
Length = 195
Score = 83.2 bits (204), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 43 AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKL-AGGE 101
A W + + GD+LVFKY H+VVEV +AGY C+ +GP +NSGDD + L A G
Sbjct: 45 AQWVSAVTFRVGDQLVFKYSPAAHDVVEVTKAGYDSCSSSGPVATFNSGDDTVPLTATGT 104
Query: 102 AFFICSIRDHCTAGMKVKVAVTA 124
+F+C HC AGMK+ V V A
Sbjct: 105 RYFMCGFPGHCAAGMKIAVKVEA 127
>Os03g0807500 Cupredoxin domain containing protein
Length = 209
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 30 WAVGDNKGWSF----GVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPS 85
+ VGD GW+ W K GD + FKY IHNVVEV +A Y CT + P
Sbjct: 26 YKVGDTSGWTILGNVNYTDWAVKKTFHVGDTIEFKYPQGIHNVVEVKKADYDSCTNSSPI 85
Query: 86 KVYNSGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAV 122
+ SGDD+I + A G FFIC + HC AG KV + V
Sbjct: 86 ATHTSGDDKIAIKAAGHRFFICGVPGHCAAGQKVNIRV 123
>Os08g0138200 Cupredoxin domain containing protein
Length = 190
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 43 AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAG-GE 101
A W + + GD LVF+Y H+VVEV +AGY C+ P +NSGDD + LA G
Sbjct: 46 AQWASAATFRAGDRLVFRYSPAAHDVVEVTKAGYDACSAASPIATFNSGDDTVPLAAVGT 105
Query: 102 AFFICSIRDHCTAGMKVKVAV 122
+FIC HC AGMK+ V V
Sbjct: 106 RYFICGFPGHCAAGMKLAVKV 126
>Os09g0469300 Cupredoxin domain containing protein
Length = 152
Score = 80.9 bits (198), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 30 WAVGDNKGWSFGVA--GWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKV 87
+ VGD +GW+ GV W NGK + GDELVF Y A+ H V EV + + C P
Sbjct: 25 YTVGDGEGWTTGVNYNNWANGKFFRQGDELVFNYQARAHTVTEVSQTNFDSCNGNSPLSN 84
Query: 88 YNSGDDRIKLA-GGEAFFICSIRDHCTAGMKVKVAV 122
N G I+L+ G +FIC+I HC++GMK+ V V
Sbjct: 85 DNGGSTTIRLSYPGMHYFICTIPGHCSSGMKLAVNV 120
>Os08g0137800 Cupredoxin domain containing protein
Length = 190
Score = 80.1 bits (196), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 45 WENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKL-AGGEAF 103
W + + GD++VFKY H+VVEV++A Y C+ + P +NSGDD I L A G +
Sbjct: 45 WVSNINFRAGDQIVFKYSPAAHDVVEVNKADYDSCSSSSPIATFNSGDDTIPLTATGTRY 104
Query: 104 FICSIRDHCTAGMKVKVAVTA 124
FIC HCT GMKV V V A
Sbjct: 105 FICGFNGHCTGGMKVAVKVEA 125
>Os08g0482600 Plastocyanin-like domain containing protein
Length = 172
Score = 78.6 bits (192), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 29 DWAVGDNKGWSFGV--AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTG-PS 85
+ VGD +GW+ GV W GK + D LVF+Y K H V EV ++ Y CTV+G P
Sbjct: 28 SFIVGDAQGWNTGVDYTAWAKGKTFEANDTLVFRYARKQHTVTEVTKSDYDACTVSGKPI 87
Query: 86 KVYNSGD--DRIKLAGGEAFFICSIRDHCTAGMKVKVAVT 123
+ G I L+ GE +FIC I +HC +GMK+ V V+
Sbjct: 88 SDFEGGALVTFIALSPGEHYFICKIGNHCASGMKLAVTVS 127
>Os04g0545600 Similar to Uclacyanin 3-like protein
Length = 191
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Query: 28 EDWAVGDNKGWSFGV--AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPS 85
+D+ VGD+ GW+ GV W GK GD L+F+Y + H+VVEV A + C+ P
Sbjct: 34 KDYTVGDSSGWTTGVDYTAWARGKTFNIGDTLLFQYTSAGHSVVEVSEADHTSCSAANPL 93
Query: 86 KVYNSGDDRIKLA-GGEAFFICSIRDHCTAGMKVKVAV 122
+ Y G + L G +FIC HC AGMK+ V V
Sbjct: 94 RSYKDGTTIVTLTRSGTRYFICGSTGHCGAGMKLTVTV 131
>Os08g0137900 Similar to Chemocyanin precursor (Basic blue protein)
(Plantacyanin)
Length = 188
Score = 75.1 bits (183), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 43 AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAG-GE 101
A W + + GD+LVFKY H+VVEV++A Y C+ + P +NSGDD I LA G
Sbjct: 41 AQWVSAITFRVGDQLVFKYSPAAHDVVEVNKADYDSCSSSSPISTFNSGDDTIPLAAIGT 100
Query: 102 AFFICSIRDHCTAGMKVKVAVTA 124
+FIC HCTAGMKV V V A
Sbjct: 101 RYFICGFPGHCTAGMKVAVKVEA 123
>Os07g0165900
Length = 168
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 24 VVHGEDWAVGDNKGWS--FGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTV 81
+V D+ VGD GW+ + W +GK Q GD+LVF Y H V EVD A + C
Sbjct: 21 MVSATDYTVGDGHGWTLEYPSTNWADGKSFQIGDKLVFTYTKGKHTVTEVDGAAFHACNR 80
Query: 82 TGPSKV-YNSGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAV 122
G + + +NSG+D + L G+ +F C++ +HC GMK+ V V
Sbjct: 81 QGNTLMTWNSGNDTVALDKAGKRWFFCNVDNHCELGMKLVVDV 123
>Os03g0791300
Length = 133
Score = 72.4 bits (176), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 30 WAVGDNKGWSFGVA--GWENGKRIQPGDELVFKYDAKIHNVVEV-DRAGYGGCTVTGPSK 86
+ VGD+ GW GV W +GKR + GD L F Y HNVV V D + C +
Sbjct: 35 YRVGDDSGWDNGVDYDAWAHGKRFKVGDTLEFLYAEGAHNVVVVEDEGSFEACVAPANAP 94
Query: 87 VYNSGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAVT 123
+SGDD + L G FICS HC +GMK+ VAVT
Sbjct: 95 TLSSGDDTVALNQAGRWLFICSFDGHCQSGMKLAVAVT 132
>AY569612
Length = 211
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 45 WENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAG-GEAF 103
W KR PGD++VFKY A+ H+VVEV++AGY C+ + + +G+D I L G +
Sbjct: 45 WVAQKRFHPGDQIVFKYSAQRHDVVEVNKAGYDSCSTSTSIATHTTGNDVIPLTSTGTRY 104
Query: 104 FICSIRDHCTA----GMKVKVAV 122
FIC HCT MK+++ V
Sbjct: 105 FICGFPGHCTTTGTGNMKIQIDV 127
>Os02g0653200 Plastocyanin-like domain containing protein
Length = 202
Score = 72.4 bits (176), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Query: 29 DWAVGDNKGWSFGVA--GWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSK 86
D+ VGD GWS GV W K GD LVF+Y + +H V EV A Y C+ + +
Sbjct: 27 DYTVGDTSGWSSGVDYDTWAKSKTFSVGDSLVFQY-SMMHTVAEVSSADYSACSASNSIQ 85
Query: 87 VYNSGDDRIKLA-GGEAFFICSIRDHCTAGMKVKVAV 122
Y+ + +I L G +FIC HC+ GMK+ V V
Sbjct: 86 SYSDQNTKIALTKPGTRYFICGTSGHCSGGMKLAVTV 122
>Os08g0138400 Plastocyanin-like domain containing protein
Length = 190
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 27 GEDWAVG-DNKGWSFGV--AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTG 83
G + VG N GW W + + D+LVFKY A H+VVEV + GY C+ +
Sbjct: 19 GASYGVGKPNGGWDLQTNYTSWASSITFRLDDKLVFKYSAAAHDVVEVTKDGYLSCSASS 78
Query: 84 PSKVYNSGDDRIKLAG-GEAFFICSIRDHCTAGMKVKV 120
P V+ +G+D ++L G +FIC + HC AGMK++V
Sbjct: 79 PIAVHRTGEDAVELGRLGRRYFICGVPGHCDAGMKLEV 116
>Os09g0572700 Cupredoxin domain containing protein
Length = 172
Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 5/83 (6%)
Query: 45 WENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKLAG-GEAF 103
W KR PGD++VFKY A+ H+VVEV++AGY C+ + + +G+D I L G +
Sbjct: 45 WVAQKRFHPGDQIVFKYSAQRHDVVEVNKAGYDSCSTSTSIATHTTGNDVIPLTSTGTRY 104
Query: 104 FICSIRDHCTA----GMKVKVAV 122
FIC HCT MK+++ V
Sbjct: 105 FICGFPGHCTTTGTGNMKIQIDV 127
>Os03g0791366
Length = 172
Score = 72.0 bits (175), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 32 VGDNKGWSFGV--AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYN 89
VGD GW G A W K+ + GD LVF+Y H VVEV A + C T + ++
Sbjct: 32 VGDGNGWILGFDYAAWAATKQFRVGDTLVFRYKGTNHTVVEVGGADFKACNKTASANEWS 91
Query: 90 SGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAV 122
SG+DR+ L G +F C + DHC MK+K+ V
Sbjct: 92 SGEDRVALDKEGRRWFFCGVGDHCAKNMKLKITV 125
>Os06g0266300
Length = 417
Score = 71.6 bits (174), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 27 GEDWAVGDNKGWSFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTV--TGP 84
G+ + VGD GW + W GK GD LVFKY+ + H+V V GY C V
Sbjct: 41 GKTYYVGDAAGWGRNLDWWLAGKTFYAGDVLVFKYNKEYHDVAVVGGKGYRRCKVPRNKD 100
Query: 85 SKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
+ V +G D++ L G +FIC + HC AGMK+ V
Sbjct: 101 TAVLRTGYDQVTLRRGNNYFICGMPGHCDAGMKLAV 136
>Os11g0428800 Plastocyanin-like domain containing protein
Length = 124
Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 25 VHGEDWAVGDNKGWSFGVA--GWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTV- 81
V E VGD+ GW F V+ W +GK GD LVF Y HNV+ VD A Y C V
Sbjct: 22 VLAETHVVGDSNGWDFSVSFDSWADGKVFAAGDTLVFNYKPGAHNVLAVDAATYRSCKVG 81
Query: 82 -TGPSKVYNSGDDRIKLAGGEAFFICSIRDHCTAGMKVKV 120
+ S +G L G ++IC + HC AGMK++V
Sbjct: 82 SSADSVAAATGTASFLLKKGVNYYICGVPGHCAAGMKLRV 121
>Os12g0150500 Cupredoxin domain containing protein
Length = 190
Score = 69.7 bits (169), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Query: 26 HGEDWAVGD-NKGW--SFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVT 82
G + VG+ GW + W + ++ GD+LVF+YDA ++VVEV RAGY C+
Sbjct: 13 SGASYTVGEPGGGWDTQTNLTAWASTVDLRRGDQLVFRYDASAYDVVEVTRAGYLSCSAA 72
Query: 83 GP-SKVYNSGDDRIKL--AGGEAFFICSIRDHCTAGMKVKVAVT 123
P S +G+D ++L A G +FI + C AGMK++V VT
Sbjct: 73 SPVSAALRTGNDVVRLDSAAGWRYFIYGVEGRCAAGMKLQVRVT 116
>Os06g0218600 Cupredoxin domain containing protein
Length = 198
Score = 69.7 bits (169), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 30 WAVGDNKGWSFGV--AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKV 87
+ VGD GW+ G W + K+ + GD LVF Y H+V EV A Y CT + +
Sbjct: 25 YTVGDTSGWAMGADYTTWASDKKFKMGDTLVFNYAGGAHSVDEVSAADYAACTASNALQS 84
Query: 88 YNSGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAV 122
+SG + L G+ +FIC I HC+ GMK+ V V
Sbjct: 85 DSSGTTTVTLKTAGKHYFICGIAGHCSNGMKLVVDV 120
>Os08g0137400 Cupredoxin domain containing protein
Length = 174
Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 45 WENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYNSGDDRIKL-AGGEAF 103
W + PGD+L F Y ++H+VVEV +AGY C+ + SG+D + L A G +
Sbjct: 54 WVARRTFHPGDKLTFTYSRELHDVVEVTKAGYDACSNANNISAFRSGNDLVALTAVGTRY 113
Query: 104 FICSIRDHCTAGMKVKVAV 122
F+C + HC +GMK+++ V
Sbjct: 114 FLCGLTGHCGSGMKIRIDV 132
>AK068398
Length = 126
Score = 68.9 bits (167), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 30 WAVGDNKGWSF----GVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPS 85
+ VGD GW+ W K GD + FKY IHNVVEV +A Y CT + P
Sbjct: 26 YKVGDTSGWTILGNVNYTDWAVKKTFHVGDTIEFKYPQGIHNVVEVKKADYDSCTNSSPI 85
Query: 86 KVYNSGDDRIKL-AGGEAFFICSIR 109
+ SGDD+I + A G FFIC ++
Sbjct: 86 ATHTSGDDKIAIKAAGHRFFICGLQ 110
>Os07g0105000 Cupredoxin domain containing protein
Length = 195
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 32 VGDNKGW--SFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKVYN 89
VG N W + W ++ GD ++F Y + H+VVEV +A Y C+ Y
Sbjct: 30 VGGNGAWDTTGNYNAWSVSQKFSQGDSILFTYPSS-HDVVEVPKASYDACSPANALASYT 88
Query: 90 SGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAVTA 124
G +KL A G+ +FIC + HC AGMK++V V A
Sbjct: 89 GGSTTVKLDAPGKHYFICGVPGHCAAGMKLEVTVAA 124
>Os04g0545400 Plastocyanin-like domain containing protein
Length = 185
Score = 63.2 bits (152), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 24 VVHGEDWAVGDNKGW--SFGVAGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTV 81
V + VG++ GW S W +GK GD LVF+Y +K H + EVD AGY C+
Sbjct: 22 VAEAASYNVGNSAGWDISADFPSWLDGKSFFVGDTLVFQY-SKYHTLSEVDEAGYRNCST 80
Query: 82 TGPSKVYNSGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAVTANA 126
+ G+ + L A G+ +F+C HC GM++ V V+ A
Sbjct: 81 ASAVLSSSDGNTTVALTAPGDRYFVCGNELHCLGGMRLHVPVSEPA 126
>Os02g0758800 Cupredoxin domain containing protein
Length = 246
Score = 62.0 bits (149), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 30 WAVGDNKGWSFGV--AGWENGKRIQPGDELVFKYDAKIHNVVEVDRAGYGGCTVTGPSKV 87
+ VGD GW+ GV W K + GD LVFKY + H VVEV AGY C
Sbjct: 28 YTVGDASGWTIGVDYTSWAGSKSFKVGDSLVFKYASGAHTVVEVSAAGYLACAAANALGS 87
Query: 88 YNSGDDRIKL-AGGEAFFICSIRDHCTAGMKVKVAV 122
+SG + L G+ +FIC+I HC GMK++V V
Sbjct: 88 DSSGSTTVALKTPGKHYFICTIAGHCAGGMKMEVDV 123
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.137 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,353,834
Number of extensions: 172358
Number of successful extensions: 413
Number of sequences better than 1.0e-10: 35
Number of HSP's gapped: 393
Number of HSP's successfully gapped: 35
Length of query: 126
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 37
Effective length of database: 12,388,755
Effective search space: 458383935
Effective search space used: 458383935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 149 (62.0 bits)