BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0146600 Os02g0146600|AK073620
(414 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 856 0.0
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 832 0.0
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 536 e-152
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 533 e-151
Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (... 419 e-117
Os04g0533000 Similar to RNA helicase (Fragment) 286 2e-77
Os02g0641800 Similar to RNA helicase (Fragment) 282 4e-76
Os10g0503700 Similar to RNA helicase (Fragment) 280 1e-75
Os01g0549700 Similar to RNA helicase (Fragment) 248 7e-66
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 247 9e-66
Os03g0827700 Similar to ATP-dependent RNA helicase 218 8e-57
AK111212 213 2e-55
AK119751 209 2e-54
AK107287 208 7e-54
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 205 4e-53
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 204 1e-52
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 203 2e-52
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 199 3e-51
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 197 1e-50
Os03g0805200 Similar to RNA helicase (Fragment) 196 2e-50
Os11g0599500 Similar to RNA helicase (Fragment) 196 2e-50
Os01g0549400 Similar to RNA helicase-like protein DB10 196 2e-50
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 196 3e-50
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 196 3e-50
Os02g0150100 Similar to DEAD-box protein abstrakt 194 9e-50
Os11g0689400 WW/Rsp5/WWP domain containing protein 193 2e-49
Os07g0301200 Similar to RNA helicase (Fragment) 193 3e-49
Os01g0172200 WW/Rsp5/WWP domain containing protein 192 3e-49
Os03g0669000 Similar to RNA helicase (Fragment) 188 6e-48
Os12g0481100 Similar to RNA helicase 187 1e-47
AK110107 184 8e-47
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 167 1e-41
Os07g0660000 165 7e-41
Os01g0618500 Similar to RNA helicase (Fragment) 154 9e-38
Os09g0520700 Similar to RNA helicase 154 1e-37
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 153 2e-37
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 151 1e-36
Os02g0826100 Similar to RNA helicase (Fragment) 150 1e-36
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 149 3e-36
Os01g0618400 Similar to RNA helicase (Fragment) 145 5e-35
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 140 1e-33
Os03g0728800 Similar to RNA helicase (Fragment) 140 2e-33
Os04g0510400 Similar to RNA helicase (Fragment) 139 3e-33
Os05g0110500 Similar to RNA helicase (Fragment) 132 6e-31
Os06g0697200 DEAD/DEAH box helicase domain containing protein 122 6e-28
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 117 1e-26
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 113 2e-25
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 110 2e-24
Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment) 106 4e-23
Os06g0535100 Similar to Helicase pitchoune (Fragment) 101 9e-22
D10398 89 5e-18
AK068197 87 2e-17
Os07g0517000 DEAD/DEAH box helicase domain containing protein 82 1e-15
AK063048 80 3e-15
Os02g0201900 DEAD/DEAH box helicase domain containing protein 70 2e-12
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/414 (100%), Positives = 414/414 (100%)
Query: 1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYG 60
MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYG
Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYG 60
Query: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRE 120
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRE
Sbjct: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRE 120
Query: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR 180
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR 180
Query: 181 PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV 240
PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV 240
Query: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
RILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 360
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
Sbjct: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 360
Query: 361 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL 414
PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL 414
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/414 (97%), Positives = 408/414 (98%)
Query: 1 MAGMAPEGSQFDAKHYDSKMQELLHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYG 60
MAGMAPEGSQFDAKHYDSKMQELL+QG+ EEFFTSYDEV ESFDDMGLQENLLRGIYAYG
Sbjct: 1 MAGMAPEGSQFDAKHYDSKMQELLNQGETEEFFTSYDEVHESFDDMGLQENLLRGIYAYG 60
Query: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQSLVLAPTRE 120
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY +VECQ+LVLAPTRE
Sbjct: 61 FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYAVVECQALVLAPTRE 120
Query: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR 180
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR
Sbjct: 121 LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLR 180
Query: 181 PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV 240
PD+IKMFVLDEADEMLSRGFKDQIYDIFQLLP KIQVGVFSATMPPEALEITRKFMNKPV
Sbjct: 181 PDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPV 240
Query: 241 RILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
RILVKRDELTLEGIKQFYVNVEKE+WKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM
Sbjct: 241 RILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKM 300
Query: 301 RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 360
R RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
Sbjct: 301 RGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ 360
Query: 361 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVADLL 414
PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNV IEELPANVADLL
Sbjct: 361 PENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVVIEELPANVADLL 414
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 536 bits (1380), Expect = e-152, Method: Compositional matrix adjust.
Identities = 257/388 (66%), Positives = 314/388 (80%), Gaps = 1/388 (0%)
Query: 28 DNEEFFTSYD-EVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 86
+N F TS EV SFD MG++E+LLRGIYAYGFEKPSAIQQR ++P G DVI QAQ
Sbjct: 17 ENLTFETSPGVEVISSFDQMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQ 76
Query: 87 SGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 146
SGTGKT+ + Q +D + E Q+L+L+PTRELA Q E+VM A+GDY+ ++VHAC+GG
Sbjct: 77 SGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGG 136
Query: 147 TSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYD 206
S+ ED R L GVHVV GTPGRV DM++R++LR IK+ +LDEADEML RGFKDQIYD
Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYD 196
Query: 207 IFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDW 266
+++ LPP++QV + SAT+P E LE+T KFM PVRILVKRDELTLEGIKQF+V VEKE+W
Sbjct: 197 VYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEW 256
Query: 267 KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 326
K DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MRS + TVSA HGDM Q RD IM EF
Sbjct: 257 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEF 316
Query: 327 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 386
RSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +
Sbjct: 317 RSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKK 376
Query: 387 DDERMLFDIQRFYNVTIEELPANVADLL 414
+D R+L DI+++Y+ I+E+P NVADL+
Sbjct: 377 EDIRILRDIEQYYSTQIDEMPMNVADLI 404
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 533 bits (1372), Expect = e-151, Method: Compositional matrix adjust.
Identities = 255/388 (65%), Positives = 314/388 (80%), Gaps = 1/388 (0%)
Query: 28 DNEEFFTSYD-EVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 86
+N F TS EV SFD MG++++LLRGIYAYGFEKPSAIQQR ++P G DVI QAQ
Sbjct: 17 ENLTFETSPGVEVISSFDQMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQ 76
Query: 87 SGTGKTATFCSGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGG 146
SGTGKT+ + Q +D + E Q+L+L+PTRELA Q E+VM A+GD++ ++VHAC+GG
Sbjct: 77 SGTGKTSMISLSVCQIVDTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGG 136
Query: 147 TSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYD 206
S+ ED R L GVHVV GTPGRV DM++R++LR IK+ +LDEADEML RGFKDQIYD
Sbjct: 137 KSIGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYD 196
Query: 207 IFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDW 266
+++ LPP++QV + SAT+P E LE+T KFM PVRILVKRDELTLEGIKQF+V VEKE+W
Sbjct: 197 VYRYLPPELQVCLISATLPHEILEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEW 256
Query: 267 KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 326
K DTLCDLY+TL ITQ+VIF NT+RKVDWLT++MRS + TVSA HGDM Q RD IM EF
Sbjct: 257 KFDTLCDLYDTLTITQAVIFCNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEF 316
Query: 327 RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 386
RSG++RVLITTD+ ARG+DVQQVSLVINYDLP E Y+HRIGRSGRFGRKGVAINFV +
Sbjct: 317 RSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKK 376
Query: 387 DDERMLFDIQRFYNVTIEELPANVADLL 414
+D R+L DI+++Y+ I+E+P NVADL+
Sbjct: 377 EDIRILRDIEQYYSTQIDEMPMNVADLI 404
>Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (eIF4A-6) (eIF-4A-6)
(Fragment)
Length = 946
Score = 419 bits (1078), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/369 (58%), Positives = 267/369 (72%), Gaps = 9/369 (2%)
Query: 48 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGL 107
+ E+L+ +KPSA+ QRGIVP C GLD+IQQ+ GT T T C GILQ+LDY
Sbjct: 585 ISESLIGETQTKDLDKPSAVHQRGIVPLCNGLDIIQQSLFGT--TVTLCCGILQRLDYAS 642
Query: 108 VECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTP 167
ECQ+LVL PT +LA + + V+ LG +L K HA GGTS EDQ+IL++GV V VGTP
Sbjct: 643 TECQALVLVPTHDLAHETQNVIGVLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTP 702
Query: 168 GRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPE 227
V ML+ ++L PDHI+MFVLDEADE+L RGFKDQI+ I Q LP K Q G FSA+M E
Sbjct: 703 CHVLGMLQGRALCPDHIRMFVLDEADEVL-RGFKDQIHGIIQFLPTKTQFGFFSASMSHE 761
Query: 228 ALEITRKFMNKPVRILVKRDELTLEGI--KQFYVNVEKEDWKLDTLCDLYETLAITQSVI 285
ALE+ RK+MNKPV I+V RDE LEGI KQFYVNVEKED KLD LC L++T+ IT+S+I
Sbjct: 762 ALEMCRKYMNKPVEIIVPRDE-ELEGINVKQFYVNVEKEDCKLDKLCGLFDTMEITRSII 820
Query: 286 FVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGID 345
FVNTR LT+K+R + +TVSA HG + Q RD ++EF+SGSSR+LITTDL RGID
Sbjct: 821 FVNTRHHAKSLTEKIRGKGYTVSAIHGGIHQRARDKAVQEFQSGSSRILITTDL--RGID 878
Query: 346 VQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEE 405
V + I YDLPTQP YL + +SG+ GRKGVAI+F+T DER+ IQ+F N IEE
Sbjct: 879 VLRAPAAIFYDLPTQPVCYLRHV-QSGQHGRKGVAISFITSTDERVFSTIQKFCNTQIEE 937
Query: 406 LPANVADLL 414
LP+NVADLL
Sbjct: 938 LPSNVADLL 946
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 286 bits (733), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 224/368 (60%), Gaps = 2/368 (0%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F+D L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 185
Query: 103 LDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHV 162
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 186 IDQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHL 245
Query: 163 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 222
+VGTPGR+ D+ ++ + M V+DEAD++LS F+ I ++ + LP Q+ +FSA
Sbjct: 246 LVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSA 305
Query: 223 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQ 282
T P E K++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 306 TFPVTVKEFKDKYLPKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 363
Query: 283 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 364 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 423
Query: 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVT 402
GID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 424 GIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 483
Query: 403 IEELPANV 410
I+ +P +
Sbjct: 484 IKPIPPQI 491
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 282 bits (721), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 222/368 (60%), Gaps = 2/368 (0%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F+D L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 111 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 170
Query: 103 LDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHV 162
+D Q ++L PTRELA Q +V + LG +L ++V GGTS+++D L VH+
Sbjct: 171 IDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHL 230
Query: 163 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 222
+VGTPGR+ D+ ++ M ++DEAD++LS F+ + + + LP Q+ +FSA
Sbjct: 231 LVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSA 290
Query: 223 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQ 282
T P E K++ KP I + DELTL+GI QFY VE E K+ L L+ L I Q
Sbjct: 291 TFPVTVKEFKDKYLPKPYVINLM-DELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 348
Query: 283 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 349 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 408
Query: 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVT 402
GID+Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 409 GIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 468
Query: 403 IEELPANV 410
I+ +P +
Sbjct: 469 IKPIPPQI 476
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 148/368 (40%), Positives = 220/368 (59%), Gaps = 2/368 (0%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F+D L+ LL GIY GFE+PS IQ+ I G D++ +A++GTGKTA FC L++
Sbjct: 149 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 208
Query: 103 LDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHV 162
+D Q ++L PTRELA Q +V + LG YL ++V GGTS+++D L VH+
Sbjct: 209 IDPEKNAIQVVILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHL 268
Query: 163 VVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSA 222
+VGTPGR+ D+ R+ M V+DEAD++L+ F+ I + LP Q+ +FSA
Sbjct: 269 LVGTPGRILDLTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSA 328
Query: 223 TMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQ 282
T P + K++ +P I + DELTL+GI Q+Y VE E K+ L L+ L I Q
Sbjct: 329 TFPVTVKDFKEKYLPRPYVINLM-DELTLKGITQYYAFVE-ERQKVHCLNTLFLKLQINQ 386
Query: 283 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
S+IF N+ +V+ L K+ ++ H M Q+ R+ + +FR+G+ R L+ TDL R
Sbjct: 387 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 446
Query: 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVT 402
GI +Q V++VIN+D P E YLHR+GRSGRFG G+A+N +T +D L+ I++
Sbjct: 447 GIGIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 506
Query: 403 IEELPANV 410
I+ +P +
Sbjct: 507 IKTIPPQI 514
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 248 bits (632), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 212/373 (56%), Gaps = 6/373 (1%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F D L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ
Sbjct: 53 FRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 112
Query: 103 LDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILASGV- 160
+D + +LVL TRELA QI YL VKV GG +++ + +L +
Sbjct: 113 IDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 172
Query: 161 HVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGV 219
H+VVGTPGR+ + R + L +++ F+LDE D+ML S + + +IF++ P QV +
Sbjct: 173 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 232
Query: 220 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEDWKLDTLCDLYETL 278
FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ + E K L DL + L
Sbjct: 233 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEAEKNRKLNDLLDAL 291
Query: 279 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 338
Q VIFV + + L + + + H M Q R + F+ G R+L+ TD
Sbjct: 292 DFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATD 351
Query: 339 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQR 397
L+ RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+AI FV+ D +L +Q
Sbjct: 352 LVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 411
Query: 398 FYNVTIEELPANV 410
+ V I+ELP +
Sbjct: 412 RFEVDIKELPEQI 424
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 247 bits (631), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 212/373 (56%), Gaps = 6/373 (1%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F D L+ LLR I GFE PS +Q I G+DVI QA+SG GKTA F LQQ
Sbjct: 53 FRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQ 112
Query: 103 LDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLG-VKVHACVGGTSVREDQRILASGV- 160
+D + +LVL TRELA QI YL VKV GG +++ + +L +
Sbjct: 113 IDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCP 172
Query: 161 HVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEML-SRGFKDQIYDIFQLLPPKIQVGV 219
H+VVGTPGR+ + R + L +++ F+LDE D+ML S + + +IF++ P QV +
Sbjct: 173 HIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMM 232
Query: 220 FSATMPPEALEITRKFMNKPVRILVKRD-ELTLEGIKQFYVNVEKEDWKLDTLCDLYETL 278
FSAT+ E + +KFM P+ I V + +LTL G+ Q Y+ + E K L DL + L
Sbjct: 233 FSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEAEKNRKLNDLLDAL 291
Query: 279 AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTD 338
Q VIFV + + L + + + H M Q R + F+ G R+L+ TD
Sbjct: 292 DFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEERLTRYKNFKEGHKRILVATD 351
Query: 339 LLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTR-DDERMLFDIQR 397
L+ RGID+++V++VINYD+P ++YLHR+GR+GRFG KG+AI FV+ D +L +Q
Sbjct: 352 LVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQE 411
Query: 398 FYNVTIEELPANV 410
+ V I+ELP +
Sbjct: 412 RFEVDIKELPEQI 424
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 218 bits (554), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 138/368 (37%), Positives = 206/368 (55%), Gaps = 25/368 (6%)
Query: 46 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 103
+GL E L+ + G IQ+ ++P G D+I +A++GTGKT F +++QL
Sbjct: 74 LGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLME 133
Query: 104 -DYGLVECQS-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQRIL 156
D G + LVLAPTRELA+Q+EK ++ L CV GG S Q L
Sbjct: 134 EDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLST---VCVYGGVSYNVQQNAL 190
Query: 157 ASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQ 216
+ GV VVVGTPGR+ D++ SL+ +K VLDEAD+ML+ GF++ + I Q LP + Q
Sbjct: 191 SRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQLPAERQ 250
Query: 217 VGVFSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVEKEDWKLDTLCDL 274
+FSATMP +++R+++N P+ I + +DE EGIK + + + K L DL
Sbjct: 251 SMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTS-KRTVLSDL 309
Query: 275 YETLAI-TQSVIFVNTRRKVD----WLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 329
A ++++F T+R D LT+ + S A HGD+ Q+ R+ + FR G
Sbjct: 310 ITVYAKGGKTIVFTKTKRDADEVSLALTNSIASE-----ALHGDISQHQRERTLNGFRQG 364
Query: 330 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 389
VL+ TD+ ARG+D+ V L+I+Y+LP PE ++HR GR+GR G+ G AI T
Sbjct: 365 KFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTNSQR 424
Query: 390 RMLFDIQR 397
R + ++R
Sbjct: 425 RTVRSLER 432
>AK111212
Length = 545
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 194/371 (52%), Gaps = 10/371 (2%)
Query: 34 TSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTA 93
T + E+FD+ G ++ + A GF P+AIQ +G G DV+ A++G+GKT
Sbjct: 130 TEVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTL 189
Query: 94 TFCSGILQQLDYGLVECQS-----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 148
T+C + ++ + LVLAPTRELA QI++ M+ G ++ GG
Sbjct: 190 TYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVP 249
Query: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIF 208
R L+ GV V + TPGR+ DML + VLDEAD ML GF+ QI I
Sbjct: 250 KGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKII 309
Query: 209 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELT----LEGIKQFYVNVEKE 264
+ P Q +SA P E + F+N +++ + EL + I + ++EK
Sbjct: 310 GQIRPDRQTLTWSAAWPKEVRALASDFLNDFIQVNIGSMELAANHRITQIVEVVTDMEKR 369
Query: 265 DWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMR 324
D + L E + +IFV T+R D +T +R + HGD QN RD ++
Sbjct: 370 DRMIKHLEKTMENKE-NKILIFVGTKRIADEITRFLRQDGWPALSIHGDKQQNERDWVLD 428
Query: 325 EFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV 384
+F++G S +++ TD+ +RGIDV+ ++ V+NYD P E+Y+HRIGR+GR G KG AI
Sbjct: 429 QFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPHNSEDYIHRIGRTGRAGAKGTAITLF 488
Query: 385 TRDDERMLFDI 395
T D+++ D+
Sbjct: 489 TTDNQKQARDL 499
>AK119751
Length = 628
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/390 (33%), Positives = 210/390 (53%), Gaps = 23/390 (5%)
Query: 41 ESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 100
+ FD + L E ++ I + KP+ +Q+ I G D++ AQ+G+GKTA FC I+
Sbjct: 165 DGFDQLDLGEVMMNNIRRCKYTKPTPVQRYAIPIGLAGRDIMACAQTGSGKTAAFCFPII 224
Query: 101 QQLDYGLVEC-------------QSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGT 147
GLV+ +L+LAPTREL QI + R G++ GG
Sbjct: 225 S----GLVKAGYQPTGRQRKALPAALILAPTRELTSQIYEEARKFSYQSGIRPVVIYGGA 280
Query: 148 SVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDI 207
V R + G ++V TP R+ D++ R + I+ LDEAD ML GF+ QI I
Sbjct: 281 PVVNQLREMERGCDMLVATPRRLSDLIERARVSLAAIRYLALDEADRMLDMGFEPQIRRI 340
Query: 208 FQL--LPP--KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEK 263
+ +PP + Q +FSAT P E + F++ + + V R + + I Q ++ +
Sbjct: 341 VEGEDMPPTGQRQTMLFSATFPKEIQRLAADFLHDYIFLTVGRVGSSTDLIAQ-HIEYVQ 399
Query: 264 EDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 323
+D K +T+ D T+ +++FV T+R D L D + ++ ++ GD Q R++ +
Sbjct: 400 QDQKRETVLDCVNTVE-GLTLVFVETKRGADQLEDYLLRQNLPATSIRGDKSQAEREMAL 458
Query: 324 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 383
R FRSG R+L+ TD+ ARG+D+ V+ VINYDLP ++Y+HRIGR+GR G+KG+A F
Sbjct: 459 RAFRSGKCRILVATDVAARGLDIPHVTHVINYDLPKDIDDYVHRIGRTGRAGKKGLATAF 518
Query: 384 VTRDDERMLFDIQRFYNVTIEELPANVADL 413
T DD + +Q + T +E+P +A++
Sbjct: 519 FTDDDFGLARSLQEVLSETGQEVPGWLANI 548
>AK107287
Length = 554
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 127/382 (33%), Positives = 193/382 (50%), Gaps = 13/382 (3%)
Query: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
SFD+ G + +L I GF +PSAIQ + G D++ A++G+GKT F +
Sbjct: 134 SFDEAGFPDYILSEIKKMGFAEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMV 193
Query: 102 QLDY--------GLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQ 153
++ G + +L+LAPTRELA QI+ G ++ A GG
Sbjct: 194 HINAQPLLKPGDGPI---ALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQT 250
Query: 154 RILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPP 213
R L G +V+ TPGR+ DM+ + V+DEAD ML GF+ QI I Q + P
Sbjct: 251 RDLQRGAEIVIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRP 310
Query: 214 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCD 273
Q +FSAT P E + F+N ++ + EL + + V E K L
Sbjct: 311 DRQTLMFSATWPKEVQRLAGDFLNDFAQVNIGSTELAANHNVKQIIEVCSEFEKKGKLIG 370
Query: 274 LYETLAITQS--VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 331
ET++ +IF +T+R D LT +R A HGD Q RD ++ EF+SG S
Sbjct: 371 HLETISQENGKVIIFTSTKRVADDLTKYLRQDGWPALAIHGDKQQQERDWVLAEFKSGRS 430
Query: 332 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 391
+++ T + +RG+DV+ +S VINYD PT E+Y+H+IGR+GR GR G A F T ++ +
Sbjct: 431 PIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTFFTPENSKS 490
Query: 392 LFDIQRFYNVTIEELPANVADL 413
++ +E+P + ++
Sbjct: 491 ARELVGILREAKQEIPREIEEM 512
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 222/450 (49%), Gaps = 47/450 (10%)
Query: 5 APEGSQFDA------KHYDSKMQELLHQGD----NEEFFTSYD-----EVFESFDDMGLQ 49
A +++DA +H+ K + + + D E+F SY + + L
Sbjct: 264 ADAAAKYDAFDMRVDRHWTQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSESKLG 323
Query: 50 ENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDY---- 105
LLR + G+++PS IQ I + DVI A++G+GKTA F +L L Y
Sbjct: 324 TELLRAVEKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAF---VLPMLSYITRL 380
Query: 106 -GLVECQ------SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAS 158
+ E ++V+APTRELAQQIE+ YLG+KV + VGG S+ E +
Sbjct: 381 PPISEENEAEGPYAVVMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQ 440
Query: 159 GVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP-----P 213
G VV+ TPGR+ D L R+ + VLDEAD M+ GF+ Q+ + +P P
Sbjct: 441 GCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKP 500
Query: 214 KIQ------------VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV 261
+ + +FSATMPP + RK++ PV + + + I Q + +
Sbjct: 501 ENEDEELDAKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTAGKATDLITQNVI-M 559
Query: 262 EKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDI 321
KE K+ L + L +++F NT++ D + V+ HG Q R+
Sbjct: 560 TKESEKMSRLQKILTDLGDKPAIVFCNTKKSADARAKDLDKAGFRVTTLHGGKSQEQRET 619
Query: 322 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAI 381
+ FR+ VL+ TD+ RGID+ V+ VINY++P+ + Y HRIGR+GR G+KG+A
Sbjct: 620 SLDGFRNRRFTVLVATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLAT 679
Query: 382 NFVTRDDERMLFDIQRFYNVTIEELPANVA 411
+F+T ++ + FD+++ + +P +A
Sbjct: 680 SFLTLENTDIFFDLKQMLIQSNSPVPPELA 709
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 207/385 (53%), Gaps = 15/385 (3%)
Query: 40 FESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC-SG 98
+SF D G L+ I G+EKP+ IQ + + G D+I A++G+GKTA F
Sbjct: 218 IKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPM 277
Query: 99 ILQQLDYGLVECQ----SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 154
I+ +D +E + +V APTRELA QI + ++V A GG S + +
Sbjct: 278 IVHIMDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFK 337
Query: 155 ILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 214
L +G +V+ TPGR+ D+L+ ++L+ VLDEAD M GF+ QI I + P
Sbjct: 338 ELKAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPD 397
Query: 215 IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV-----EKEDWKLD 269
Q +FSATMP + + R+ + P+R+ V + E IKQ VNV EK W L+
Sbjct: 398 RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSANEDIKQV-VNVLPSDAEKMPWLLE 456
Query: 270 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 329
L + + + ++F + +VD + ++ R ++A HGD DQ +R +++F+SG
Sbjct: 457 KLPGMIDDGDV---LVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSG 513
Query: 330 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK-GVAINFVTRDD 388
VL+ TD+ ARG+D++ + V+N+D+ + + ++HRIGR+GR G K G A +T+ +
Sbjct: 514 VYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKE 573
Query: 389 ERMLFDIQRFYNVTIEELPANVADL 413
R ++ +++P + DL
Sbjct: 574 VRFAGELVHCLIAAGQDVPNELMDL 598
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 201/376 (53%), Gaps = 10/376 (2%)
Query: 47 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLD-- 104
GL LL I GFEKP +IQ + + G D I A++G+GKT F +L+ +
Sbjct: 430 GLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQ 489
Query: 105 YGLVECQS---LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVH 161
+V L++APTREL QI ++ LG+ A GG+ V + L G
Sbjct: 490 PAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELKRGAE 549
Query: 162 VVVGTPGRVFDMLRRQSLRPDHIK---MFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 218
+VV TPGR+ D+L S + +++ V+DEAD M GF+ QI I Q P Q
Sbjct: 550 IVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTV 609
Query: 219 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLY-ET 277
+FSAT P + + RK + KPV I V + + I Q V V E+ + L +L E
Sbjct: 610 LFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQL-VEVRPENERFFRLLELLGEW 668
Query: 278 LAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITT 337
+ ++FV+++ K D L + + + HG DQ R+ + +F+S +LI T
Sbjct: 669 FDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTDRESTLADFKSNVCSLLIAT 728
Query: 338 DLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQR 397
+ ARG+DV+++ LV+NYD+P E+Y+HR+GR+GR GRKG A+ F++ ++ER D+ +
Sbjct: 729 SVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVK 788
Query: 398 FYNVTIEELPANVADL 413
++ + +P ++ L
Sbjct: 789 ALELSEQAVPEDLKGL 804
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 132/391 (33%), Positives = 205/391 (52%), Gaps = 38/391 (9%)
Query: 45 DMG--LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----SG 98
D+G L EN+ R Y KP+ +Q+ I G D++ AQ+G+GKTA FC SG
Sbjct: 175 DLGDALNENIRRCKYV----KPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISG 230
Query: 99 ILQ----------QLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 148
I++ + Y L +L+L+PTREL+ QI + R GVKV GG
Sbjct: 231 IMRSRPPPRSRGSRTAYPL----ALILSPTRELSVQIHEEARKFAYQTGVKVVVAYGGAP 286
Query: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIF 208
+ + R L GV ++V TPGR+ D+L R + IK LDEAD ML GF+ QI I
Sbjct: 287 ITQQLRELERGVEILVATPGRLMDLLERARVSLQMIKYLALDEADRMLDMGFEPQIRKIV 346
Query: 209 QLL--PPK--IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ---FYVNV 261
+ + PP+ Q +FSAT P E + F+ + + V R + + I Q F ++
Sbjct: 347 EQMDMPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIVQRVEFVLDA 406
Query: 262 EKEDWKLDTL-----CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 316
+K + +D L + A+T ++FV T+R D L + + + ++ HGD Q
Sbjct: 407 DKRSYLMDLLHAQRANGTHGKQALT--LVFVETKRGADALENWLYNNGFPATSIHGDRTQ 464
Query: 317 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 376
R+ +R F+SG++ +L+ TD+ ARG+D+ V+ VIN+DLP ++Y+HRIGR+GR G+
Sbjct: 465 QEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGK 524
Query: 377 KGVAINFVTRDDERMLFDIQRFYNVTIEELP 407
G+A F + + + +E+P
Sbjct: 525 SGLATAFFNESNTPLARPLSELMQEANQEVP 555
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 198/371 (53%), Gaps = 8/371 (2%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F+ MGL E + RG+ G+ P+ IQ++ + G D+ A++G+GKTA F ++Q+
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 103 L---DYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASG 159
L D G ++L+L+PTR+LA Q K + LG + +K+ VGG S+ LA
Sbjct: 111 LRRHDAG-AGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAEN 169
Query: 160 VHVVVGTPGRVFDMLRR-QSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 218
+++ TPGR+ L + L ++ V DEAD + S G Q++DI L Q
Sbjct: 170 PDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTL 229
Query: 219 VFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETL 278
+FSAT+P + + + P + + D+ +K + + +E+ KL L L
Sbjct: 230 LFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLAFFTLRQEE-KLAALLYLVRER 288
Query: 279 AIT--QSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLIT 336
+ Q++IFV+T+ V++L R S ++G MDQ R+I + +FR+ + +LI
Sbjct: 289 ISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARKTMILIV 348
Query: 337 TDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 396
TD+ ARG+D+ + V+N+D P +P+ ++HR+GR R GR G A FVT +D L D+
Sbjct: 349 TDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMAYLLDLH 408
Query: 397 RFYNVTIEELP 407
F + + P
Sbjct: 409 LFLSKPLRPAP 419
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 196/367 (53%), Gaps = 38/367 (10%)
Query: 45 DMG--LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----SG 98
D+G L EN+ R Y KP+ +Q+ I G D++ AQ+G+GKTA FC SG
Sbjct: 180 DLGDALNENIRRCKYV----KPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISG 235
Query: 99 ILQ----------QLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 148
I+ + Y L +L+L+PTREL+ QI + R GV+V GG
Sbjct: 236 IMSSRPPQRPRGSRTAYPL----ALILSPTRELSVQIHEEARKFAYQTGVRVVVAYGGAP 291
Query: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIF 208
+ + R L GV ++V TPGR+ D+L R + +K LDEAD ML GF+ QI I
Sbjct: 292 IHQQLRELERGVEILVATPGRLMDLLERARVSLQMVKYLALDEADRMLDMGFEPQIRKIV 351
Query: 209 QLL--PPK--IQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ---FYVNV 261
+ + PP+ Q +FSAT P E + F+ + + V R + + I Q F +
Sbjct: 352 EQMDMPPRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSSTDLIAQRVEFVLEA 411
Query: 262 EKEDWKLDTL-----CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 316
+K + +D L + A+T ++FV T+R D L + + + ++ HGD Q
Sbjct: 412 DKRSYLMDLLHAQKANGTHGKQALT--LVFVETKRGADALENWLYTNGFPATSIHGDRTQ 469
Query: 317 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 376
R+ +R F+SG++ +L+ TD+ ARG+D+ V+ VIN+DLP ++Y+HRIGR+GR G+
Sbjct: 470 QEREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGK 529
Query: 377 KGVAINF 383
G+A F
Sbjct: 530 SGLATAF 536
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 202/390 (51%), Gaps = 24/390 (6%)
Query: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFC----S 97
+F ++ L + L I + +P+ +Q+ I G D++ AQ+G+GKTA FC S
Sbjct: 156 TFAEIDLGQALNDNIRRCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIIS 215
Query: 98 GIL-----QQLDYG--LVECQ-SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSV 149
GI+ Q+ G C +L+L+PTREL+ QI + R GV+V GG +
Sbjct: 216 GIMRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPI 275
Query: 150 REDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ 209
+ R L GV ++V TPGR+ D+L R + I+ LDEAD ML GF+ Q+ I +
Sbjct: 276 NQQLRDLERGVDILVATPGRLVDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVE 335
Query: 210 ---LLPPKI-QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKED 265
+ PP Q +FSAT P E + F+ + + V R + + I Q V++ D
Sbjct: 336 QMDMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGSSTDLIVQRVEFVQEAD 395
Query: 266 WKLDTLCDLYETL-------AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNT 318
K L DL T +++FV T+R D L + ++ HGD +Q
Sbjct: 396 -KRSHLMDLLHAQRDSATPGKPTLTLVFVETKRGADSLEHWLCMNGFPATSIHGDRNQQE 454
Query: 319 RDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 378
R+ +R F+SG + +L+ TD+ ARG+D+ V+ V+N+DLP ++Y+HRIGR+GR G+ G
Sbjct: 455 REYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSG 514
Query: 379 VAINFVTRDDERMLFDIQRFYNVTIEELPA 408
+A F ++ M + + +E+PA
Sbjct: 515 LATAFFNENNSSMARSLAELMQESNQEVPA 544
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 195/380 (51%), Gaps = 11/380 (2%)
Query: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
SF+ G +L+ I GF P+ IQ + + DV+ A++G+GKT +
Sbjct: 151 SFETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFM 210
Query: 102 QLDYGLVECQS----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILA 157
+ +S LVLAPTRELA QI + G + GG R L
Sbjct: 211 HIKRLQNNPRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLD 270
Query: 158 SGVHVVVGTPGRVFDML--RRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 215
GV VVV TPGR+ D+L RR SL+ + VLDEAD ML GF+ QI I + +PP+
Sbjct: 271 RGVDVVVATPGRLNDILEMRRISLK--QVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRR 328
Query: 216 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLDTLCDL 274
Q +++AT P E I + PV++ + DEL V + KL L +
Sbjct: 329 QTLMYTATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQI 388
Query: 275 YETL-AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 333
+ + ++ +IF T+R D L + +R SA HGD Q+ R+ ++ FRSG S +
Sbjct: 389 LRSQDSGSKVLIFCTTKRMCDQLARTL-TRQFGASAIHGDKSQSEREKVLSHFRSGRSPI 447
Query: 334 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 393
L+ TD+ ARG+D++ + +VINYD PT E+Y+HRIGR+GR G GVA F D +
Sbjct: 448 LVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAA 507
Query: 394 DIQRFYNVTIEELPANVADL 413
D+ + + +P ++AD+
Sbjct: 508 DLIKILEGANQRVPRDLADM 527
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 129/368 (35%), Positives = 196/368 (53%), Gaps = 14/368 (3%)
Query: 39 VFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG 98
V +F ++GL + L+ + G P+A+Q+R I +G DV+ A++G+GKTA F
Sbjct: 75 VPSTFAELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALP 134
Query: 99 ILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAS 158
IL +L +L LAPTRELA Q+ + RALG LG++ A +GG + LA
Sbjct: 135 ILHRLGEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAKGLAR 194
Query: 159 GVHVVVGTPGRVFDMLRRQSLRPDHIKMF------VLDEADEMLSRGFKDQIYDIFQLLP 212
HVVV TPGR+ ++ PD K+F VLDEAD +L F++ + IF LP
Sbjct: 195 RPHVVVATPGRIATLINDD---PDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSLP 251
Query: 213 PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNV---EKEDWKLD 269
K Q +FSAT+ + N T++ +KQ Y++V KE +
Sbjct: 252 KKRQTFLFSATISDNLRSLLELSGNNSYFFEAYEGFKTVDTLKQLYIHVPPDAKELYLFY 311
Query: 270 TLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSG 329
L + E I ++FV+T R +L + H + H Q+ R + F+S
Sbjct: 312 LLSKMNED-NIRSVIVFVSTCRTCQYLDFLLEELGHPAVSLHSHKPQSRRLAALHNFKSS 370
Query: 330 SSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFV-TRDD 388
VL+ TD+ +RG+D+Q V LVINYD+P P +Y+HR+GR+ R R G++I+F+ T+ D
Sbjct: 371 KVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARATRGGLSISFITTQRD 430
Query: 389 ERMLFDIQ 396
R+L +I+
Sbjct: 431 IRLLHEIE 438
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 185/342 (54%), Gaps = 28/342 (8%)
Query: 78 GLDVIQQAQSGTGKTATFC----SGILQQLDYGL------------VECQSLVLAPTREL 121
G D++ AQ+G+GKTA FC SG++ G+ + ++LVLAPTREL
Sbjct: 3 GRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTREL 62
Query: 122 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRP 181
A QI + + G++V GGT + R L G ++V TPGR+ DM+ R +
Sbjct: 63 AAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKVSL 122
Query: 182 DHIKMFVLDEADEMLSRGFKDQIYDIFQLL--PPKI--QVGVFSATMPPEALEITRKFMN 237
+ IK V+DEAD ML GF+ QI I + + P K Q +FSAT PPE + F++
Sbjct: 123 EAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDFLS 182
Query: 238 KPVRILVKRDELTLEGIKQ---FYVNVEKEDWKLDTLCDLYETLAITQ-----SVIFVNT 289
+ I V R + + I Q + EK + LD L +A ++ +++FV T
Sbjct: 183 NYIFITVGRVGSSTDLIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVET 242
Query: 290 RRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQV 349
+R+ D L + S+ +A HGD Q R+ +R F++G + +++ TD+ +RG+DV V
Sbjct: 243 KREADSLRYWLYSKGFPATAIHGDRTQQERESALRSFKTGLTPIMVATDVASRGLDVPNV 302
Query: 350 SLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 391
+ VINYDLP E+Y+HRIGR+GR G+ G A F T D +
Sbjct: 303 AHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFFTESDHSL 344
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 119/387 (30%), Positives = 209/387 (54%), Gaps = 19/387 (4%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL-- 100
F D+ L E +LR + G +P+ IQ +G+ G D+I A +G+GKT F ++
Sbjct: 17 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMV 76
Query: 101 ---QQLDYGLVECQS---LVLAPTRELAQQ----IEKVMRALGD--YLGVKVHACVGGTS 148
+++ +V + +++ P+RELA+Q IE+ + L + Y ++ C+GG
Sbjct: 77 ALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVD 136
Query: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIF 208
+R ++ GVH+VV TPGR+ D+L ++ + D+ + LDEAD ++ GF+D I ++F
Sbjct: 137 MRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVF 196
Query: 209 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEDWK 267
+ Q +FSATMP + + + KPV + V R L+ I++ V KED +
Sbjct: 197 DHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGAANLDVIQE--VEYVKEDAR 254
Query: 268 LDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 327
+ L + + ++F + VD++ + + + A HG DQ R+ + F+
Sbjct: 255 IIYLLECLQKTP-PPVLVFCENKADVDYIHEYLLLKGVEAVAIHGGKDQEERENAIEFFK 313
Query: 328 SGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRD 387
+G VL+ TD+ ++G+D + VINYD+P + ENY+HRIGR+GR G+ G+A F+ ++
Sbjct: 314 NGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKN 373
Query: 388 D-ERMLFDIQRFYNVTIEELPANVADL 413
E L D++ + +P +A+L
Sbjct: 374 QTETTLLDLKHLLKEAKQRIPPVLAEL 400
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 193 bits (491), Expect = 2e-49, Method: Composition-based stats.
Identities = 124/383 (32%), Positives = 194/383 (50%), Gaps = 13/383 (3%)
Query: 40 FESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 99
F +F+ G +L+ I+A GF P+ IQ + + D++ A++G+GKT +
Sbjct: 603 FMTFEATGFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPA 662
Query: 100 LQQL----DYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 155
L + ++ LVLAPTRELA QI+ G V GGTS R
Sbjct: 663 FIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRE 722
Query: 156 LASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 215
L G +VV TPGR+ D+L + + + VLDEAD ML GF+ QI I +P
Sbjct: 723 LERGADIVVATPGRLNDILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNR 782
Query: 216 QVGVFSATMPPEALEITRKFMNKPVRILVKR-DELTLEGIKQFYVNVEKEDWKLDTLCDL 274
Q +++AT P E +I + PV++ + DEL YV V LD L
Sbjct: 783 QTLMYTATWPKEVTKIAGDLLKDPVQVNIGSIDELVANKSITQYVEVVP---PLDKQRRL 839
Query: 275 YETLAI----TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGS 330
+ L ++ +IF +T++ D L + R ++ HGD Q RD ++ +FR+G
Sbjct: 840 EQILRAQERGSKVIIFCSTKKMCDQLARDI-GRSFGAASIHGDKSQAERDNVLNQFRTGR 898
Query: 331 SRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDER 390
+ +L+ TD+ ARG+D++ + +VINYD PT E+Y+HRIGR+GR G GV+ F + D +
Sbjct: 899 APILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWK 958
Query: 391 MLFDIQRFYNVTIEELPANVADL 413
D+ + + +P + ++
Sbjct: 959 YAGDLVKVLEGANQHVPPELQEM 981
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/341 (34%), Positives = 179/341 (52%), Gaps = 11/341 (3%)
Query: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQS------- 112
GFE+PS IQ G D I A +G+GKT F L + + E +
Sbjct: 111 GFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRV 170
Query: 113 LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFD 172
LVL+PTRELAQQI V+ G G+ GGTS L SGV +V+GTPGR+ D
Sbjct: 171 LVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKD 230
Query: 173 MLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEIT 232
++ R + + VLDEAD ML GF+ ++ I Q +FSAT PP ++
Sbjct: 231 LIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLA 290
Query: 233 RKFMN-KPVRILVKRDELTLEGIKQFYVNV---EKEDWKLDTLCDLYETLAITQSVIFVN 288
++FM+ P+++++ ++L V V D +L L D Y + ++FV
Sbjct: 291 QEFMDPNPIKVVIGSEDLAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVL 350
Query: 289 TRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQ 348
+R+ + ++ R + + HGD Q+ R + F+ GS ++I TD+ +RG+D+
Sbjct: 351 YKREATRVETMLQRRGWSAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPD 410
Query: 349 VSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDE 389
V +VINY P E+Y+HRIGR+GR G+KGVA F T++++
Sbjct: 411 VEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAHTFFTQENK 451
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 185/344 (53%), Gaps = 11/344 (3%)
Query: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSG---ILQQLDYGLVECQS-LVL 115
GF P+ IQ + + D++ A++G+GKT + +L++L + + + LVL
Sbjct: 250 GFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSRDGPTVLVL 309
Query: 116 APTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDMLR 175
+PTRELA QI+ + G + GG R L G +VV TPGR+ D+L
Sbjct: 310 SPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPGRLNDILE 369
Query: 176 RQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKF 235
+ + + VLDEAD ML GF+ QI I + + PK Q +F+AT P E +I
Sbjct: 370 MRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTATWPKEVRKIASDL 429
Query: 236 MNKPVRILV-KRDELTLEGIKQFYVNV---EKEDWKLDTLCDLYETLAITQSVIFVNTRR 291
++ PV++ + D+L YV+V ++ +LD + L ++ +IF +T+R
Sbjct: 430 LSNPVQVNIGNTDQLVANKSITQYVDVITPPEKSRRLDQI--LRSQEPGSKIIIFCSTKR 487
Query: 292 KVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351
D L + +R + SA HGD Q RD ++ EFRSG +L+ TD+ ARG+D++ + +
Sbjct: 488 MCDQLARNL-ARQYGASAIHGDKSQAERDSVLSEFRSGRCPILVATDVAARGLDIKDIRV 546
Query: 352 VINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 395
V+NYD PT E+Y+HRIGR+GR G GVA F D + D+
Sbjct: 547 VVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDL 590
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
Query: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
+F ++G+ L+ A G+++P+ IQ I +G D+I Q+G+GKT F I+Q
Sbjct: 42 TFAELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQ 101
Query: 102 QL-----DYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 156
L L C VL+PTRELA QI + ALG +G+ VGG + L
Sbjct: 102 ALLKQDKPQALFAC---VLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSL 158
Query: 157 ASGVHVVVGTPGRVFDMLR-RQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKI 215
A H+VVGTPGR+ D L + + +K VLDEAD++L+ F+ + DI ++P +
Sbjct: 159 AKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKER 218
Query: 216 QVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCDLY 275
+ +FSATM + ++ R + PV++ V T++ ++Q + V D+K L +
Sbjct: 219 RTFLFSATMTNKVSKLQRACLRNPVKVEVASKYSTVDTLRQEFYFVP-ADYKDCFLVHVL 277
Query: 276 ETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLI 335
L + +IFV T L +R+ + G M Q+ R + F++ +LI
Sbjct: 278 NELPGSMIMIFVRTCESTRLLALTLRNLRFKAISISGQMSQDKRLGALNRFKTKDCNILI 337
Query: 336 TTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 395
TD+ +RG+D+Q V +VINYD+P ++Y+HR+GR+ R G G A++ V + + I
Sbjct: 338 CTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVSLVNQYEAMWFKMI 397
Query: 396 QRFYNVTIEELPANVADLL 414
++ I + + A+++
Sbjct: 398 EKLLGYEIPDRKVDNAEIM 416
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 192/382 (50%), Gaps = 15/382 (3%)
Query: 28 DNEEFFTSYDEV---FESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQ 84
D +FF S + SF ++ L LLR A G++KP+ IQ I G D+
Sbjct: 208 DPSKFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGS 267
Query: 85 AQSGTGKTATFCSGILQQLDYG---LVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVH 141
A +G+GKTA F +L++L + + + L+L PTRELA Q+ ++ L + ++
Sbjct: 268 AITGSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCC 327
Query: 142 ACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQ-SLRPDHIKMFVLDEADEMLSRGF 200
VGG S + + L S +VV TPGR+ D LR S+ + + + +LDEAD +L GF
Sbjct: 328 LIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGF 387
Query: 201 KDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRI-----LVKRDELTLEGIK 255
+I ++ ++ P + Q +FSATM E E+ +NKPVR+ L + LT E ++
Sbjct: 388 SAEIQELIRMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVR 447
Query: 256 QFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMD 315
++ L LC +T + +IF T+ L + HG++
Sbjct: 448 IRRAREANQEAVLLALC--LKTFK-DKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLT 504
Query: 316 QNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFG 375
Q R + F+ LI TD+ ARGID+ V VIN+ P YLHR+GR+ R G
Sbjct: 505 QAQRLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAG 564
Query: 376 RKGVAINFVTRDDERMLFDIQR 397
R+G A+ FVT DD +L I +
Sbjct: 565 REGYAVTFVTDDDRSLLKAIAK 586
>AK110107
Length = 671
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 128/392 (32%), Positives = 195/392 (49%), Gaps = 22/392 (5%)
Query: 38 EVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 97
E F + L ++L+R I ++ P+ +Q+ I G D++ AQ+G+GKT F
Sbjct: 177 EPVREFTNPPLDDHLIRNIDLARYKIPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLF 236
Query: 98 GILQQL--------------DYGL---VECQSLVLAPTRELAQQIEKVMRALGDYLGVKV 140
IL Q +G SL+LAPTREL QI R V+
Sbjct: 237 PILSQAFQTGPSANPTAGGGGFGRQRKAYPTSLILAPTRELVSQIYDESRKFAYRSWVRP 296
Query: 141 HACVGGTSVREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGF 200
GG + R + G ++V TPGR+ D++ R + +IK VLDEAD ML GF
Sbjct: 297 CVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLQNIKYLVLDEADRMLDMGF 356
Query: 201 KDQIYDIFQLLP-PKIQ---VGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ 256
+ QI I + P +Q +FSAT P + + R F+ + + V R T E I Q
Sbjct: 357 EPQIRRIVEGEDMPNVQDRQTLMFSATSPRDIQMLARDFLKDYIFLSVGRVGSTSENITQ 416
Query: 257 FYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 316
VE D K L D+ T ++IFV T+R D L+D + +++ ++ HGD Q
Sbjct: 417 KVEYVEDVD-KRSVLLDILHTHGAGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQ 475
Query: 317 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 376
R+ + FR+G +L+ T + ARG+D+ V+ V+NYDLPT ++Y+HRIGR+GR G
Sbjct: 476 RERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGN 535
Query: 377 KGVAINFVTRDDERMLFDIQRFYNVTIEELPA 408
G + F R + ++ ++ +E+PA
Sbjct: 536 TGHSTAFFNRGNRGVVRELLDLLKEANQEVPA 567
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/380 (29%), Positives = 187/380 (49%), Gaps = 8/380 (2%)
Query: 40 FESFDDM----GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATF 95
E+F+++ G L+ + GF++P+ IQ++ I G + A +G+GKT F
Sbjct: 141 LENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAF 200
Query: 96 CSGILQQLDYGLVE-CQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQR 154
IL ++ G E ++++L PTRELA Q + + L G K + + + +
Sbjct: 201 LFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAK--GRKFYIKLMTKDLSKSGN 258
Query: 155 ILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP-P 213
+++ TP R+ ++++ L ++ VLDE+D++ GF + I + + P
Sbjct: 259 FKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNP 318
Query: 214 KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLCD 273
I +FSAT+P + R M+ VR++V R IKQ + E KL L
Sbjct: 319 SIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTEKGKLLALRQ 378
Query: 274 LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRV 333
+ +IFV ++ + L ++ D H D+D+ R + R+G + V
Sbjct: 379 SFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVDNLRAGKTWV 438
Query: 334 LITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLF 393
LI T+++ARG+D + V+ VINYD P Y+HRIGRSGR GR G AI F T +D+ L
Sbjct: 439 LIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLR 498
Query: 394 DIQRFYNVTIEELPANVADL 413
+I + E+P+ + L
Sbjct: 499 NIANVLISSGCEVPSWIKAL 518
>Os07g0660000
Length = 444
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 122/389 (31%), Positives = 193/389 (49%), Gaps = 42/389 (10%)
Query: 60 GFEKPSAIQQRGIVPFC-KGLDVIQQAQSGTGKTATFCSGILQQL-DYGLVECQ-SLVLA 116
G++ P+ IQ ++PF +G DVI Q+G+GKTA F I+Q L ++ C + VLA
Sbjct: 2 GWKAPTRIQAE-VIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCFFACVLA 60
Query: 117 PTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI-LASGVHVVV----------- 164
PTRELA QI K ALG + ++ +GG R Q I LA HVVV
Sbjct: 61 PTRELAIQIAKQFEALGSAISLQCSVLIGGIP-RTSQTISLAKRPHVVVWWRSSRACLPE 119
Query: 165 -------------------GTPGRVFDMLRR-QSLRPDHIKMFVLDEADEMLSRGFKDQI 204
GTPGR+ D L + + +K VLDEAD++L F+ +
Sbjct: 120 HLRKGFDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAV 179
Query: 205 YDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQ-FYVNVEK 263
DI ++P + + +FSATM + ++ R + PV++ V ++ ++Q YV K
Sbjct: 180 DDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVASKYSLVDTLRQDLYVVPAK 239
Query: 264 EDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIM 323
+K L + + + ++FV T L +R+ + G M Q+ R +
Sbjct: 240 --YKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLRFKAISISGQMSQDKRLGAL 297
Query: 324 REFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINF 383
FR+ +L+ TD+ +RG+D+Q V +VINYD P ++Y+HR+GR+ R G+ G A++
Sbjct: 298 NRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVSL 357
Query: 384 VTRDDERMLFDIQRFYNVTIEELPANVAD 412
V + + ++F EE+PA D
Sbjct: 358 VNQFEGEFFKLTEQFLGG--EEIPARKVD 384
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 177/351 (50%), Gaps = 21/351 (5%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
FD + L+ I G+EK + +Q+ + +G DV+ +A++GTGKT F ++
Sbjct: 76 FDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTVAFLLPAIEL 135
Query: 103 LDYGLVECQS---LVLAPTRELAQQIEKVMRALGDY---LGVKVHACVGGTSVREDQRIL 156
L L S LV+ PTRELA Q+ R L Y LGV+V +GGT + ++QR +
Sbjct: 136 LST-LPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQV--VIGGTKLPQEQRSM 192
Query: 157 ASG-VHVVVGTPGRVFDMLRRQ---SLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP 212
S ++V TPGR+ D L S R +K+ VLDEAD +L GF+ I I +P
Sbjct: 193 QSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRRDIEKIIAFIP 252
Query: 213 PKIQVGVFSATMPPEALEITRKFMNKPVRIL--VKR-DELTLEGIKQFYVNVEKEDWKLD 269
+ Q +FSAT+P E +I+ M + + + VK DE T + Q Y+ V D
Sbjct: 253 KERQTLLFSATVPEEVRQISHIAMKRGYKFINTVKEGDEETHSQVSQMYM-VAPLDLHFS 311
Query: 270 TLCDLYETL----AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 325
L ++ + A + ++F T + + + + H Q+ R + E
Sbjct: 312 ILYNVLKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLNIREIHSRKSQSARTKVSDE 371
Query: 326 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 376
FR +L+++D+ ARG+D V+LVI LP E Y+HR+GR+GR G+
Sbjct: 372 FRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGRKGK 422
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 179/370 (48%), Gaps = 30/370 (8%)
Query: 48 LQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL---- 103
+ E+L + + G + IQ G D++ +A++G GKT F IL+ L
Sbjct: 122 ISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGT 181
Query: 104 -------DYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRIL 156
DYG LVL PTRELA+Q+ G G+ GG+ R + +
Sbjct: 182 HKASRRTDYGRPPT-VLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQEMAI 240
Query: 157 ASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP--PK 214
GV +VVGTPGRV D + + +L +K VLDEADEML+ GF D + I + K
Sbjct: 241 RKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVEDVTK 300
Query: 215 IQVGVFSATMPPEALEITRKFMN--KPVRILVKRDELTLEGIKQFYVNVEKEDWKLDTLC 272
+Q +FSAT+P +++ +F+ K LV ++L + + +
Sbjct: 301 VQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARAQVIP 360
Query: 273 DLYETLAI-TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 331
D+ + +++IF T+ L+ + A HGD+ Q R++I+ FRSG
Sbjct: 361 DIIRCYSRGGRTIIFTETKESASDLSGLIAGS----RALHGDVAQAQREVILAGFRSGKF 416
Query: 332 RVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERM 391
VL+ T++ ARG+D+ V L+I + P E Y+HR GR+GR G GVA+ M
Sbjct: 417 LVLVATNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAV---------M 467
Query: 392 LFDIQRFYNV 401
LF+ + +NV
Sbjct: 468 LFEPRYKFNV 477
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 115/398 (28%), Positives = 196/398 (49%), Gaps = 33/398 (8%)
Query: 47 GLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYG 106
L +++ + GF + + +Q I DV A +G+GKT F +++ L
Sbjct: 29 ALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVEILRRR 88
Query: 107 LV-----ECQSLVLAPTRELAQQIEKVMRALGDYL-GVKVHACVGGTSVR-EDQRILASG 159
E ++++PTREL+ QI V + L GV VGG ++ E +++ G
Sbjct: 89 PSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEEG 148
Query: 160 VHVVVGTPGRVFDMLRR-QSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVG 218
+++VGTPG++FD++ R +L ++++ +LDEAD +L GF+ QI I LP + G
Sbjct: 149 ANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRTG 208
Query: 219 VFSATMPPEALEITRKFMNKPVRILVKRD-----------EL----TLEGIKQFYVNVEK 263
+FSAT E+ + + PVR+ VK + EL T G++ Y+ E
Sbjct: 209 LFSATQTEAVKELAKAGLRNPVRVEVKTEVKPTGKDGAQQELGPSKTPLGLRLEYMICEA 268
Query: 264 EDWKLDTLCDLYETLAITQSVIFVNTRRKVDW------LTDKMRSRDHTVSATHGDMDQN 317
+ K L D + +++ T VD+ L D ++ + HG M Q
Sbjct: 269 SN-KSSQLVDFLVQNNGKKIMVYFATCACVDYWAIVLPLLDSLKG--SPIIPYHGKMKQG 325
Query: 318 TRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRK 377
R+ + F + SS +L+ TD+ ARG+D+ V L++ YD P P ++HR GR+ R+ ++
Sbjct: 326 PREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQE 385
Query: 378 GVAINF-VTRDDERMLFDIQRFYNVTIEELPANVADLL 414
G AI F + ++D + F +R +T E N D++
Sbjct: 386 GDAIVFLLPKEDTYVEFLKRRGVPLTERECSTNAVDIV 423
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 215/468 (45%), Gaps = 74/468 (15%)
Query: 4 MAPEGSQFDAKHYDSKMQE--LLHQ--GDNEEFFTSYDEVFESFDDMGLQENLLRGIYAY 59
M P+ S F+AK S + + +L + +E F++ +SF+++GL L+ +
Sbjct: 95 MKPKVSSFNAKPVKSALPKSAVLKKTLKIDESLFSA-----KSFEELGLPPLLIDRLNKE 149
Query: 60 GFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVE---------- 109
G P+ +Q I + D + Q+ +G+GKT + IL ++ G ++
Sbjct: 150 GLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEI--GPLKRPTEQDSSDK 207
Query: 110 ---CQSLVLAPTRELAQQI-EKVMRALGDYLGVKVHACVGGTS-VREDQRILASGVHVVV 164
+++++AP+REL QI +V + LG V VGG + R+++ + + +VV
Sbjct: 208 RSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPIIVV 267
Query: 165 GTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQ------------LLP 212
GTPGR+ ++ L + VLDE D++LS +++ ++ I + +L
Sbjct: 268 GTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILG 327
Query: 213 P-----KIQVGVFSATMPPEALEITRKFMNKPV-----------RILVKRDELT------ 250
P + Q + SAT+P + R + + PV I V R L+
Sbjct: 328 PLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLESITVPRPVLSQPDANS 387
Query: 251 --------------LEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWL 296
L + Y K K+DTL L + F+N + + +
Sbjct: 388 NSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLKDV 447
Query: 297 TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 356
K+ +R + HGD+ + R ++++F+ G RVL+T +L ARG+DV + LVIN D
Sbjct: 448 VFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLVINLD 507
Query: 357 LPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIE 404
LPT +Y HR GR+GR GRKG + + ++ +++ V I+
Sbjct: 508 LPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQLAVPIK 555
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 197/400 (49%), Gaps = 42/400 (10%)
Query: 25 HQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC-KGLDVIQ 83
++ E FT+ + F++ G+ ++ + G+ + + +Q+ + P C +G DV+
Sbjct: 331 YESRGESLFTN-----KRFEECGISPLTVKALTDAGYVQTTVVQETAL-PMCLEGKDVLV 384
Query: 84 QAQSGTGKTATFC--------SGILQQLDYGLVECQSLVLAPTRELAQQIEKVMRALGDY 135
+A++GTGK+A F + + ++ + SL+L PTRELA Q+ L Y
Sbjct: 385 KAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKY 444
Query: 136 L-GVKVHACVGGTSVREDQRILAS-GVHVVVGTPGRVFDMLRRQS---LRPDHIKMFVLD 190
G+ V + +GGT + DQR L S ++V TPGR+ D + +S +R +K+ VLD
Sbjct: 445 HQGIGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLD 504
Query: 191 EADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDEL- 249
EAD +L GF+ I I LP + Q +FSAT+P E +++ +++KRD +
Sbjct: 505 EADHLLDLGFRTDIEKIVDSLPRQRQTLLFSATIPKEVRRVSQ--------LVLKRDHVF 556
Query: 250 ----------TLEGIKQFYVNVEKE---DWKLDTLCDLYETLAITQSVIFVNTRRKVDWL 296
T ++Q Y+ + E L + + + ++F T +++
Sbjct: 557 VDTVGLGAVETPTKVEQLYLVMPHELHFHMVYRLLREHIDQEVDYKVIVFCTTAMVTEFM 616
Query: 297 TDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYD 356
+R V H Q R I EFR S +L+T+D+ RG++ V+LVI
Sbjct: 617 YIMLRDLKLNVREIHSRKPQLYRTRISEEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVG 676
Query: 357 LPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 396
+P+ E+Y+HR+GR+GR G+ G I + +E L +I
Sbjct: 677 VPSDREHYIHRLGRTGREGKSGKGILLLAPWEEYFLNEIH 716
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 205/439 (46%), Gaps = 70/439 (15%)
Query: 29 NEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSG 88
+E F++ +SF+++GL L+ + G P+ +Q I + D + Q+ +G
Sbjct: 124 DESLFSA-----KSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTG 178
Query: 89 TGKTATFCSGILQQLDYGLVE-------------CQSLVLAPTRELAQQI-EKVMRALGD 134
+GKT + IL ++ G ++ +++++AP+REL QI +V + LG
Sbjct: 179 SGKTLAYLLPILSEI--GPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVREVEKILGP 236
Query: 135 YLGVKVHACVGGTS-VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEAD 193
V VGG + R+++ + + +VVGTPGR+ ++ L + VLDE D
Sbjct: 237 NDKRLVQQLVGGANRSRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLDEVD 296
Query: 194 EMLSRGFKDQIYDIFQ------------LLPP-----KIQVGVFSATMPPEALEITRKFM 236
++LS +++ ++ I + +L P + Q + SAT+P + R +
Sbjct: 297 QLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWG 356
Query: 237 NKPVRI----LVKRDELTL----------------EGIKQFYVN-----------VEKED 265
+ PV + +V D +T+ + Q VN + K
Sbjct: 357 HDPVLVRAMSVVPLDSITVPRPVLSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQ 416
Query: 266 WKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 325
K+DTL L + F+N + + + K+ +R + HGD+ + R ++++
Sbjct: 417 HKVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKK 476
Query: 326 FRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT 385
F+ G RVL+T +L ARG+DV + LVIN DLPT +Y HR GR+GR GRKG +
Sbjct: 477 FKDGEFRVLVTNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICE 536
Query: 386 RDDERMLFDIQRFYNVTIE 404
+ ++ +++ V I+
Sbjct: 537 ETETFVVRKMRKQLAVPIK 555
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 179/358 (50%), Gaps = 25/358 (6%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
FD + L+ + G+E+ + +Q+ + +G DV+ +A++GTGKT F ++
Sbjct: 128 FDQCTISPLSLKAVKDAGYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFLLPAIEV 187
Query: 103 L--------DYGLVECQSLVLAPTRELAQQIEKVMRALGDY---LGVKVHACVGGTSVRE 151
L D LV+ PTRELA Q+ + L Y LGV+V +GGT + +
Sbjct: 188 LSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQV--VIGGTRLTQ 245
Query: 152 DQRIL-ASGVHVVVGTPGRVFDMLRRQ---SLRPDHIKMFVLDEADEMLSRGFKDQIYDI 207
+QR + A+ ++V TPGR+ D + S R +K+ VLDEAD +L GF+ I I
Sbjct: 246 EQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRDIERI 305
Query: 208 FQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRIL--VKR-DELTLEGIKQFYVNVEKE 264
+P + Q +FSAT+P E +I+ M K + + VK DE T + Q ++ +
Sbjct: 306 IASVPKERQTLLFSATVPEEVRQISHIAMKKNYKFINTVKDGDEETHAQVSQMFM-IAPL 364
Query: 265 DWKLDTLCDLYETL----AITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 320
D L D+ + A + +IF T + + + + H Q+ R
Sbjct: 365 DLHFSILYDVLKKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLNIREIHSRKSQSART 424
Query: 321 IIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKG 378
+ EFR +L+++D+ ARG+D V+LVI +P + Y+HR+GR+GR G++G
Sbjct: 425 KVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRKGKEG 482
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/402 (29%), Positives = 196/402 (48%), Gaps = 38/402 (9%)
Query: 38 EVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 97
EV +SF+++GL E ++ + G KP+ IQ G+ G V+ + +G+GKT +
Sbjct: 107 EVVDSFEELGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLL 166
Query: 98 GILQQL--DYGLV-------ECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTS 148
++Q L D ++ +++VL PTREL +Q+ +V +++ + + GG+
Sbjct: 167 PLVQLLRRDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSR 226
Query: 149 VREDQRILASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIF 208
+R + L V +VVGTPGR+ D ++ ++ IK VLDEAD M +GF DI
Sbjct: 227 IRPQEDSLNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGP---DIR 283
Query: 209 QLLPP-----------KIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQF 257
+ L P Q + +ATM ++ + V + + + +
Sbjct: 284 KFLAPLKNRAAKPGDQGFQTVLVTATMTKAVQKLIDEEFEGIVHLRTTTFQKRVATARHD 343
Query: 258 YVNVEKEDWKLDTLCDLYE-TLAITQSV-IFVNT---RRKVD-WLTDKMRSRDHTVSATH 311
++ + + KL+ L + E +LA V +F NT R VD +LT+ S TV+ H
Sbjct: 344 FIKLSGSENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLTENQIS---TVN-YH 399
Query: 312 GDMDQNTRDIIMREFRS--GSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIG 369
G++ R + +FR+ G L+ TDL ARG+D+ V VI +D P+ +YLHR G
Sbjct: 400 GEVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTG 458
Query: 370 RSGRFGRKGVAINFVTRDDERMLFDIQRFY--NVTIEELPAN 409
R+ R G KG + V + D + I+ N ++E L N
Sbjct: 459 RTARMGAKGKVTSLVAKKDVTLATRIEEAMKKNESLEALTTN 500
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 199/427 (46%), Gaps = 64/427 (14%)
Query: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
SFD++GL E L R + G +K + IQ+ I +G DV+ +A++G+GKT + +L
Sbjct: 93 SFDELGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLH 152
Query: 102 QL----DYGLVECQS---LVLAPTRELAQQIEKVMRALGDYLGVKVHAC-VGGTSVREDQ 153
+L G + + +L PTREL QQ+ +L ++ K+ V + +D
Sbjct: 153 ELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEFCTSKLKVVQVNASMSDKDI 212
Query: 154 RILASG-VHVVVGTPGRVFDMLRRQSLRPDHIK----MFVLDEADEMLSRGFKDQIYDIF 208
++ SG +++V TP V + + +R IK M +LDEAD +LS +D I +
Sbjct: 213 KVALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKALV 272
Query: 209 QLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILV-----KRDELTLEGIKQFYVNVEK 263
+P Q + SAT + ++T+ ++ P + + +D+L + ++QF+++ +
Sbjct: 273 PHIPRSCQSILMSATSSADIEKLTKLLLHNPFILTLTEVGHAKDDLIPKNVQQFWISCDA 332
Query: 264 EDWKLDTLCDLYETLAITQSVIFVN---TRRKVDWLTDKMRSRDHTVSATHGDMDQNTRD 320
+D L L L L + +IFVN + K+ +K R ++A ++ QN+R
Sbjct: 333 KDKMLYILVLLKLELIQKKVLIFVNSIDSAFKLRLFLEKFGIRSSVLNA---ELPQNSRL 389
Query: 321 IIMREFRSGSSRVLITTD---------------------------------LLARGIDVQ 347
I++ F + LI TD + RGID +
Sbjct: 390 HIIQAFNARLFDYLIATDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVVRGIDFK 449
Query: 348 QVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVT-------RDDERMLFDIQRFYN 400
V V+NYD+P P Y+HR+GR+GR + G +I+ V+ D E ML D++
Sbjct: 450 NVFTVVNYDMPPDPAGYVHRVGRTGRANKTGASISLVSPKENGIFEDIENMLKDVENRDT 509
Query: 401 VTIEELP 407
I P
Sbjct: 510 SCISPFP 516
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 208/468 (44%), Gaps = 87/468 (18%)
Query: 24 LHQGDNEEFFTSYDEVFESFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFC--KGLDV 81
+ Q +N+ DEV+ ++ ++ L L+ + GF++P+ IQ + P +G DV
Sbjct: 182 MEQDNNDGLILGEDEVY-AWRELRLHPLLITAVRRLGFKEPTPIQ-KACFPAAAHQGKDV 239
Query: 82 IQQAQSGTGKTATFCSGILQQL------------------DYGLVEC--QSLVLAPTREL 121
I A++G+GKT F ILQ+L D E ++L+L PTREL
Sbjct: 240 IGAAETGSGKTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTREL 299
Query: 122 AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVFDML---RRQS 178
A+Q+ ++ +L ++V VGG S+ + +R+L +VVGTPGR+++++ +
Sbjct: 300 AKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHL 359
Query: 179 LRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLP------------------------PK 214
++ + FVLDEAD M+ RG ++ I ++LP K
Sbjct: 360 IKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKK 419
Query: 215 IQVGVFSATMPPEALEITRKFMNKPVRILV------KRDELTLEGIKQ---FYVNVEKED 265
Q VFSAT L ++ F K R LV D ++E + + N E D
Sbjct: 420 RQTFVFSAT-----LALSANFRKKLKRGLVTAKASASTDLSSIEALSKQARMKPNAEIVD 474
Query: 266 WKLDTL-----------CD-------LYETLAI---TQSVIFVNTRRKVDWLTDKMRSRD 304
++ C LY L++ +++IF + + L+ +R
Sbjct: 475 LTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIAALRHLSSILRVLG 534
Query: 305 HTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENY 364
V H M Q R + FR + +L+ TD ARG+D V VI+Y LP + Y
Sbjct: 535 INVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQLPHSTDVY 594
Query: 365 LHRIGRSGRFGRKGVAINFVTRDDERMLFDI-QRFYNVTIEELPANVA 411
+HR GR+ R G +I ++ D+ + + + +++ P + A
Sbjct: 595 IHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKENLQQFPVDHA 642
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 202/459 (44%), Gaps = 86/459 (18%)
Query: 28 DNEEFFTSYDEVFESFDDMGLQENLLRGIY-AYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 86
D E F S SF D+GL L + GF+ P+ IQ + I G ++ +A
Sbjct: 15 DKEGLFASC-----SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAA 69
Query: 87 SGTGKTATFCSGI--LQQLDYGLVE----CQSLVLAPTRELAQQIEKVMRALGDYLGVKV 140
+GTGKT + + I L Q+ VE +LVL PTREL Q+ + + L V
Sbjct: 70 TGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLV 129
Query: 141 HACV-GGTSVREDQRILASGVHVVVGTPGRVFDMLRRQS--LRPDHIKMFVLDEADEMLS 197
+ GG + +++ L G+ +++ TPGR+ D L+ S + P+ ++ V DEAD +L
Sbjct: 130 PGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPN-MRWIVFDEADSILE 188
Query: 198 RGFKDQIYDIFQLL---------------PPKIQVGVFSATMPPEALEITRKFMNKPVRI 242
GF + DI + L P K Q + SAT+ + + + + PV I
Sbjct: 189 LGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMI 248
Query: 243 LVKRDELTLEG--------------IKQFYVNVEK--EDWKLDT---------------- 270
+ + G +++ V VE+ +D+KL
Sbjct: 249 GLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLA 308
Query: 271 -----LCDLYETLAITQSVIFVNTRRKVD----------WL------TDKMRSR-DHTVS 308
L L+E + V+F++T VD W TDK + V
Sbjct: 309 ILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVF 368
Query: 309 ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRI 368
HG+MDQ+ R F S S +L++TD+ ARG+D +V +I YD P + Y+HR+
Sbjct: 369 RLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRV 428
Query: 369 GRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELP 407
GR+ R G KG A+ F+ + L D++ + ++ E P
Sbjct: 429 GRTARIGEKGEALLFLQPIETDYLRDLE-LHGASLTEYP 466
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 124/231 (53%), Gaps = 5/231 (2%)
Query: 185 KMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILV 244
+ LDEAD ++ GF+D I ++F + Q +FSATMP + + + KP+ + V
Sbjct: 20 RYLTLDEADRLVDLGFEDDIREVFDHFKAQRQTLLFSATMPEKIQNFAKSALVKPIIVNV 79
Query: 245 KR-DELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSR 303
R L+ I++ V KE+ ++ L + + ++F + VD++ + + +
Sbjct: 80 GRAGAANLDVIQE--VEYVKEEARIIYLLECLQKTP-PPVLVFCEHKADVDYIQEFLLLK 136
Query: 304 DHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPEN 363
A HG D R + F++ VL+ TD+ ++G+D+ + VINYD+P + EN
Sbjct: 137 GVEAVAIHGGKDDEERKDAFKSFKASEKDVLVATDVASKGLDIPDIQHVINYDMPAEIEN 196
Query: 364 YLHRIGRSGRFGRKGVAINFVTRDD-ERMLFDIQRFYNVTIEELPANVADL 413
Y+HRIGR+GR G+ GVA F+ ++ E L D+++ + + LP +ADL
Sbjct: 197 YVHRIGRTGRRGKTGVATTFINKNQTETTLLDLKQLLIESKQRLPPILADL 247
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 11/225 (4%)
Query: 46 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 103
+G+ ++ + A G + IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
Query: 104 ----DYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASG 159
+ +++LAPTRELA+Q+EK + + V+ GG + R L G
Sbjct: 148 HNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVY---GGVPISHQMRALNYG 204
Query: 160 VHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGV 219
V VVVGTPGR+ D+LRR L I+ VLDEAD+ML+ GF + + I + LP Q +
Sbjct: 205 VDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSML 264
Query: 220 FSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVE 262
FSATMP +IT K++ P+ I + D+ EGI + + E
Sbjct: 265 FSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASE 309
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 3/131 (2%)
Query: 112 SLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASGVHVVVGTPGRVF 171
++VLAPTRELA+Q+E R D V+ GGT + + R L GV VV+GTPGRV
Sbjct: 13 AIVLAPTRELAKQVE---REFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGRVI 69
Query: 172 DMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEI 231
D+L+R +L ++ VLDEAD+MLS GF + + I +PPK Q +FSATMP +
Sbjct: 70 DLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATMPTWIQRL 129
Query: 232 TRKFMNKPVRI 242
T+K++ PV I
Sbjct: 130 TQKYLKNPVTI 140
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 165/374 (44%), Gaps = 33/374 (8%)
Query: 42 SFDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQ 101
SF ++G + +L + ++GF +PS IQ P +G I QSG+GKT + ++Q
Sbjct: 253 SFKEIGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQ 312
Query: 102 QLDYGLVEC---------QSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVRED 152
L VE + +VL PT ELA Q+ R++ GV + V R+
Sbjct: 313 NLRKEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKS-GVPFRSMVATGGFRQK 371
Query: 153 QRI--LASGVHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSR-GFKDQIYDIFQ 209
++ L + V++ TPGR +L+ ++ ++++ VLDE D + F+ ++ +
Sbjct: 372 TQLESLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYGEESFEQVLHQLIT 431
Query: 210 LLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEDW--- 266
+ P Q +AT+P + + I+ T +++ V+ +D
Sbjct: 432 VAPLTTQYLFVTATLPLDIYNKVVETFPDCELIMGPGVHRTSSRLEEILVDCSGDDNEEK 491
Query: 267 --------KLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSAT-----HGD 313
K L + E + +++IF N + + +R D S H
Sbjct: 492 NPETAFSNKKSALVKIIEESPVRKTIIFCNKIETCRKVENALRRVDRKASQIKVLPFHAA 551
Query: 314 MDQNTRDIIMREF---RSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGR 370
+DQ R ++EF ++ S L+ TD +RGID V+ V+ +D P P Y+ R+GR
Sbjct: 552 LDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSEYVRRVGR 611
Query: 371 SGRFGRKGVAINFV 384
+ R G G FV
Sbjct: 612 TAR-GASGNGKAFV 624
>Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment)
Length = 521
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 64/378 (16%)
Query: 80 DVIQQAQSGTGKTATFCSGILQQLDYGLVEC-QSLVLAPTRELAQQIEKVMRALGDYLGV 138
D+ + +G+GKT + I+Q L V C ++LV+ PTR+LA Q+++V A+ +G+
Sbjct: 80 DICINSPTGSGKTLAYALPIVQMLATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVGL 139
Query: 139 KVHACVGGTSV---------REDQRILAS------------GVHVVVGTPGRVFDMLR-R 176
V + VG +S+ + Q + S V ++V TPGR+ D +
Sbjct: 140 SVGSAVGQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMT 199
Query: 177 QSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLL-------------------P----- 212
+ +H++ V+DE D ML ++ + + QL P
Sbjct: 200 KGFSLEHLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNGETLLHPLTTIR 259
Query: 213 -------------PKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYV 259
P++ V SAT+ + ++++ + P+ + + + Q Y
Sbjct: 260 RSGVERGFKGKSFPRLAKIVLSATLTQDPSKLSQLELQHPLLLNSGKKRYRIPTKLQSYK 319
Query: 260 NVEKEDWKLDTLCDLYETLAITQSVIF---VNTRRKVDWLTDKMRSRDHTVSATHGDMDQ 316
V K + K +L L + L + ++F V + ++ L + S +
Sbjct: 320 LVCKSNLKPLSLIVLLQELRGEKCLVFTSSVESSHRLSTLLEFFEDLPFKFSEYSRLQRE 379
Query: 317 NTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 376
+TR + F+ G VLI TD +ARGI + + VINYD+P + Y+HR GR+ R G
Sbjct: 380 STRRKTLDAFKEGKIDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGE 439
Query: 377 KGVAINFVTRDDERMLFD 394
G F+ R E FD
Sbjct: 440 SGSCFTFL-RKHEVKAFD 456
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 122/237 (51%), Gaps = 15/237 (6%)
Query: 43 FDDMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQ 102
F D+ + + I + + IQ R I P G DV+ A++G+GKT F ++
Sbjct: 88 FSDLPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIEL 147
Query: 103 LDYGLVECQS----LVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILAS 158
L ++ +VL PTRELA Q V + L Y + +GG +R + LA
Sbjct: 148 LCRLRFSPRNGTGVIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLAK 207
Query: 159 GVHVVVGTPGRVFD-MLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK-IQ 216
G++V+V TPGR+ D M + +S + + +K ++DEAD +L + F++Q+ IF+LLP + Q
Sbjct: 208 GINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGRQ 267
Query: 217 VGVFSATMPPEALEITR-KFMNKPVR----ILVKRDE----LTLEGIKQFYVNVEKE 264
+FSAT + + + F +K R + V D+ T+EG+KQ Y + E
Sbjct: 268 TVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHESKATVEGLKQGYCVIPSE 324
>D10398
Length = 57
Score = 89.4 bits (220), Expect = 5e-18, Method: Composition-based stats.
Identities = 40/41 (97%), Positives = 40/41 (97%)
Query: 59 YGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGI 99
YGFEKPSAIQQRGIVPF KGLDVIQQAQSGTGKTATFCSGI
Sbjct: 14 YGFEKPSAIQQRGIVPFSKGLDVIQQAQSGTGKTATFCSGI 54
>AK068197
Length = 181
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 184 IKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRIL 243
+ VLDEAD ML GF+ QI I + P Q +SAT P E + R+F+ P +++
Sbjct: 8 VTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSATWPREVESLARQFLQNPYKVI 67
Query: 244 VKRDELTLEGIKQFYVNVEKEDWKLDTLCDLYETLAI-TQSVIFVNTRRKVDWLTDKMRS 302
+ +L Q + V E K L L L ++ +IF T++ D +T ++R
Sbjct: 68 IGSPDLKANHSIQQIIEVISEHEKYPRLSKLLSDLMDGSRILIFFQTKKDCDKVTRQLRM 127
Query: 303 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGI 344
+ HGD Q RD ++ EF+SG S ++ TD+ ARG+
Sbjct: 128 DGWPALSIHGDKAQAERDYVLAEFKSGKSPIMAATDVAARGL 169
>Os07g0517000 DEAD/DEAH box helicase domain containing protein
Length = 524
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 101/191 (52%), Gaps = 6/191 (3%)
Query: 206 DIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTL--EGIKQFYVNVEK 263
++ LP Q +FSAT ++ R + P I V + T + ++Q+ + V
Sbjct: 2 NVVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAMIVPL 61
Query: 264 EDWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVS--ATHGDMDQNTRDI 321
E KL+ L + ++ ++F+++ ++V ++ + + +S HG M +
Sbjct: 62 EQ-KLNMLWSFIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQA 120
Query: 322 IMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAI 381
I+ EF+ G S VL +TD+ ARG+D++ V V+ D P Y+HR+GR+ R+ ++G A+
Sbjct: 121 IVAEFKEGHS-VLFSTDIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKAL 179
Query: 382 NFVTRDDERML 392
F+ ++E+ML
Sbjct: 180 IFLCPEEEKML 190
>AK063048
Length = 250
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 64/114 (56%)
Query: 283 SVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLAR 342
+++F NT R L+ R H M Q R + +F+S +L TD+ +R
Sbjct: 57 TIVFTNTCRDCQILSMMCRKFHMPSVEIHSLMKQRQRIASLAKFKSLQVPILFATDVASR 116
Query: 343 GIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQ 396
G+D+ V L+IN+++P P+ Y+HR+GR+ R GR G AI VT+ D +++ I+
Sbjct: 117 GLDIPSVDLIINHNVPFVPKEYVHRVGRTARAGRCGTAITLVTQYDVKLMHKIE 170
>Os02g0201900 DEAD/DEAH box helicase domain containing protein
Length = 124
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 59/104 (56%)
Query: 309 ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRI 368
+ HGD N R +R F +G V++ T +L RG+D+ +V VI +D+P + Y+H++
Sbjct: 1 SIHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQV 60
Query: 369 GRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELPANVAD 412
GR+ R G +G+AI FV +D + ++ + +P +A+
Sbjct: 61 GRASRMGVEGMAIVFVNEEDRNLFRELVQILKTAGAPIPRELAN 104
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.139 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,546,056
Number of extensions: 556115
Number of successful extensions: 1442
Number of sequences better than 1.0e-10: 55
Number of HSP's gapped: 1322
Number of HSP's successfully gapped: 58
Length of query: 414
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 311
Effective length of database: 11,657,759
Effective search space: 3625563049
Effective search space used: 3625563049
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)