BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0871200 Os01g0871200|AK065024
(522 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0871200 Zinc finger, C2H2-type domain containing protein 1087 0.0
Os12g0170400 Zinc finger, C2H2-type domain containing protein 344 9e-95
Os03g0838800 Zinc finger, C2H2-type domain containing protein 299 3e-81
Os08g0562300 Zinc finger, C2H2-type domain containing protein 247 1e-65
Os02g0572900 Zinc finger, C2H2-type domain containing protein 226 2e-59
Os04g0165200 Zinc finger, C2H2-type domain containing protein 218 1e-56
Os01g0859100 Similar to WIP1 protein (Fragment) 111 1e-24
Os02g0518500 110 2e-24
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 110 4e-24
Os09g0282300 Similar to WIP1 protein (Fragment) 108 9e-24
Os09g0307400 108 1e-23
Os01g0195000 Zinc finger, C2H2-type domain containing protein 103 2e-22
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 101 1e-21
Os10g0419200 Zinc finger, C2H2-type domain containing protein 100 3e-21
Os08g0554400 Zinc finger, C2H2-type domain containing protein 99 5e-21
Os01g0935000 Zinc finger, C2H2-type domain containing protein 99 8e-21
Os01g0242200 Zinc finger, C2H2-type domain containing protein 99 9e-21
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 99 1e-20
Os09g0555700 Zinc finger, C2H2-type domain containing protein 98 2e-20
Os02g0672100 Zinc finger, C2H2-type domain containing protein 96 5e-20
AK067268 95 1e-19
Os01g0572300 Zinc finger, C2H2-type domain containing protein 93 5e-19
Os04g0566400 Zinc finger, C2H2-type domain containing protein 92 9e-19
Os03g0197700 Zinc finger, C2H2-type domain containing protein 85 2e-16
Os08g0504000 Similar to WIP5 protein 82 1e-15
Os09g0485600 Similar to WIP1 protein (Fragment) 79 6e-15
Os09g0449400 Zinc finger, C2H2-type domain containing protein 78 2e-14
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/522 (100%), Positives = 522/522 (100%)
Query: 1 MDSGLGRSSETSLKALPSMASNATRNTDPDQQGVRFSSMDQPPCFARPGQSFPAFPPLFG 60
MDSGLGRSSETSLKALPSMASNATRNTDPDQQGVRFSSMDQPPCFARPGQSFPAFPPLFG
Sbjct: 1 MDSGLGRSSETSLKALPSMASNATRNTDPDQQGVRFSSMDQPPCFARPGQSFPAFPPLFG 60
Query: 61 VQSSSLYLPDDIEAKIGNQFESNPSPNNPTMDWDPQAMLSNLSFLEQKIKQVKDIVQSMS 120
VQSSSLYLPDDIEAKIGNQFESNPSPNNPTMDWDPQAMLSNLSFLEQKIKQVKDIVQSMS
Sbjct: 61 VQSSSLYLPDDIEAKIGNQFESNPSPNNPTMDWDPQAMLSNLSFLEQKIKQVKDIVQSMS 120
Query: 121 NRESQVAGGSSEAQAKQQLVTADLTCIIIQLISTAGSLLPSMKNPISSNPALRHLSNTLC 180
NRESQVAGGSSEAQAKQQLVTADLTCIIIQLISTAGSLLPSMKNPISSNPALRHLSNTLC
Sbjct: 121 NRESQVAGGSSEAQAKQQLVTADLTCIIIQLISTAGSLLPSMKNPISSNPALRHLSNTLC 180
Query: 181 APMILGTNCNLRPSANDEATIPDISKTHDYEELMNSLNTTQAESDEMMNCQNPCGGEGSE 240
APMILGTNCNLRPSANDEATIPDISKTHDYEELMNSLNTTQAESDEMMNCQNPCGGEGSE
Sbjct: 181 APMILGTNCNLRPSANDEATIPDISKTHDYEELMNSLNTTQAESDEMMNCQNPCGGEGSE 240
Query: 241 PIPMEDHDVKESDDGGERENLPPGSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMH 300
PIPMEDHDVKESDDGGERENLPPGSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMH
Sbjct: 241 PIPMEDHDVKESDDGGERENLPPGSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMH 300
Query: 301 MRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHY 360
MRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHY
Sbjct: 301 MRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHY 360
Query: 361 KRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQG 420
KRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQG
Sbjct: 361 KRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQG 420
Query: 421 HTPALPMDDIKVTGASEQPQGSEAMNTMVGSAGYNFPGSSSDDIPNLDMKMADDPRYFSP 480
HTPALPMDDIKVTGASEQPQGSEAMNTMVGSAGYNFPGSSSDDIPNLDMKMADDPRYFSP
Sbjct: 421 HTPALPMDDIKVTGASEQPQGSEAMNTMVGSAGYNFPGSSSDDIPNLDMKMADDPRYFSP 480
Query: 481 LSFDPCFGGLDDFTRPGFDISENPFSFLPSGSCSFGQQNGDS 522
LSFDPCFGGLDDFTRPGFDISENPFSFLPSGSCSFGQQNGDS
Sbjct: 481 LSFDPCFGGLDDFTRPGFDISENPFSFLPSGSCSFGQQNGDS 522
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 344 bits (883), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 204/412 (49%), Positives = 240/412 (58%), Gaps = 33/412 (8%)
Query: 91 MDWDPQAMLSNLSFLEQKIKQVKDIVQSMSNRESQVAGGSSEAQAKQQLVTADLTCIIIQ 150
MDW P ML NL+F+E+KI+QVKD+++SM+ R A SS A +QQLV ADLTC+I+Q
Sbjct: 53 MDWSPDTMLDNLTFIEEKIRQVKDVIRSMAGRR---ASSSSAATPEQQLVNADLTCLIVQ 109
Query: 151 LISTAGSLLPSMKNP--ISSNPALRHLSNTLCAPMILGTNCNLRPSANDEATIPDISKTH 208
LISTAGSLLPS+KN +S + + L + + N+E D +
Sbjct: 110 LISTAGSLLPSLKNSSFLSRTTPPPAAAAGAAQAVSLAAGESSSSARNNETNREDEEEQM 169
Query: 209 ---DYEELMNSLNTTQAESDEMMNCQNPCGGEGSEPIPMEDHDVKESDDGGERENLPPGS 265
DY+EL A M C G E +
Sbjct: 170 GSPDYDELFKVWTNGGA----MDECVGAAGDE-------------QDARENPAAAAEEEK 212
Query: 266 YVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLES 325
Y VLQLE++EILAPHTHFC ICGKGFKRDANLRMHMRGHGDEYK+AAALAKP E
Sbjct: 213 YEVLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEE 272
Query: 326 APVT---RYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVI 382
P RYSCP+ GCKRN+ H FQPLKTILCVKNHYKRSHC+K + C RC K+FSV+
Sbjct: 273 QPPQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVM 332
Query: 383 ADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGASEQPQGS 442
ADLKTHEKHCGRD+WLCSCGT+FSRKDKLF HVALFQGH PALP T + +
Sbjct: 333 ADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVALFQGHAPALPPPPPPPTSGRRRHKQE 392
Query: 443 EAMNTMVGSAGYNFPGSSSDDIPNLDMKMADDPRYFSPLSF---DPCFGGLD 491
E T G G F I + +FS SF D FG LD
Sbjct: 393 EPEFTWGGGGGNEFLDVKG--IAGVGSGSGGGDEFFSAGSFGAMDFGFGQLD 442
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 180/262 (68%), Gaps = 15/262 (5%)
Query: 248 DVKESDDGGERENLPPGSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDE 307
D E DG P GSY V+Q+EKEEILAPH HFC +CGKGFKRDANLRMHMRGHG+E
Sbjct: 130 DADEGADGDGERAPPRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEE 189
Query: 308 YKTAAALAKP------SKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYK 361
YK+AAALAKP S ++ +A YSCPYVGCKRN+EHK FQPLKT CVKNHY+
Sbjct: 190 YKSAAALAKPGGSPSRSPAAADAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYR 249
Query: 362 RSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGH 421
RSHCDKS+TC RCN K+FSV+ADL+THEKHCGRD+W+CSCGT+FSRKDKLF HVA+F GH
Sbjct: 250 RSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGH 309
Query: 422 TPALPMDDIKVTGASEQ-PQGS-EAMNTMVGSAGYNFPGSSSDDIPNLDMKMADDPRYFS 479
+PALP +D AS Q P + EA+ V + + G + M D+ S
Sbjct: 310 SPALPPEDYDDDAASGQLPHAAGEAVGRTVDTNRFFSDGLM------IKGSMEDERGSLS 363
Query: 480 PLSFDPC-FGGLDDFTRPGFDI 500
P+ D C F G+D F FD
Sbjct: 364 PMGLDYCEFDGIDLFAAAAFDF 385
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/343 (39%), Positives = 192/343 (55%), Gaps = 49/343 (14%)
Query: 98 MLSNLSFLEQKIKQVKDIVQSMSNRESQVAGGSSEAQAKQQLVTADLTCIIIQLISTAGS 157
+L NLS L+ +++Q+ +V ++ A + AD II ++++ A S
Sbjct: 50 LLYNLSVLKDRVQQLHPLV-------GLAVAHNAHAHGPLDVSAAD--AIIQEIVAAASS 100
Query: 158 LLPSMKNPISSNPALRHLSNTLCAPMILGTNCNLRPSANDEATIPDISKTHDYEELMNSL 217
++ + + LC LGT PS A + K +D+ +
Sbjct: 101 MMYAFQ--------------LLCD---LGTAPTTAPSQETAAASAVVVKNNDH-----AA 138
Query: 218 NTTQAESDEMMNCQNPCGGEGSEPIPMEDHD--VKESDDGGERENLPPGSY----VVLQL 271
+ Q E D +M Q G H V S+ P G+ +++L
Sbjct: 139 DAGQMEDDHLMQQQWQQNGSRQHDYSSHAHAPPVFHSETAA-----PAGATSATDTIIEL 193
Query: 272 EKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSK------DSSLES 325
+ E+LA +TH+C +CGKGFKRDANLRMHMR HGDEYK+ AAL+ P+K D ++ +
Sbjct: 194 DAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDETM-A 252
Query: 326 APVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADL 385
A +YSCP GC+ N+ H KFQPLK+++C KNHYKRSHC K Y C+RC K FSV++DL
Sbjct: 253 AAARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVLSDL 312
Query: 386 KTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMD 428
+THEKHCG +WLCSCGT+FSRKDKL GHV+LF GH P +P+D
Sbjct: 313 RTHEKHCGDHRWLCSCGTSFSRKDKLIGHVSLFAGHQPVMPLD 355
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 132/177 (74%), Gaps = 3/177 (1%)
Query: 264 GSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSL 323
G Y V++L+ E+LA H HFC ICGKGF+RDANLRMHMR HGD +KT AL++P +
Sbjct: 155 GDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPP 214
Query: 324 ESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKK-FSVI 382
V R+SCPY GC RN+ H++F+PLK+ +C +NH++RSHC K Y C RC KK F+V+
Sbjct: 215 AGREV-RFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVL 273
Query: 383 ADLKTHEKHCGRD-KWLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGASEQ 438
ADL++H +HCG + +W CSCGTTFSRKDKLFGH+ALF+GHTPA+ + V A+ +
Sbjct: 274 ADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGVATAAAE 330
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 98/158 (62%), Positives = 120/158 (75%), Gaps = 4/158 (2%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V++LE +LA +TH+C +CGKGFKRDANLRMHMR HGDEYKTAAAL S + + +A
Sbjct: 189 VVELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALT--STGAGMRAAA 246
Query: 328 VT-RYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLK 386
YSCP GC+ N+ H +FQ LK+++C KNHY+RSHC K Y C RC K+F+V++DL+
Sbjct: 247 RRCSYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLSDLR 306
Query: 387 THEKHCGRDKWLCSCGTTFSRKDKLFGHVALF-QGHTP 423
THEKHCG +WLCSCGT FSRKDKL GHVALF GH P
Sbjct: 307 THEKHCGELRWLCSCGTFFSRKDKLMGHVALFAAGHAP 344
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 276 ILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPY 335
++ P C +C K F R N++MHM GHG EY+ K ++ ++ P Y C
Sbjct: 210 LVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQTLAMLKLPC--YCCA- 266
Query: 336 VGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRD 395
GCK N H + +PLK ++ HYKR H K + C RC K F+V D +THEK+CG+
Sbjct: 267 AGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRC-AKPFAVKGDWRTHEKNCGK- 324
Query: 396 KWLCSCGTTFSRKDKLFGHVALFQGH 421
+W C+CG+ F K L HV F H
Sbjct: 325 RWFCACGSDFKHKRSLNDHVRSFGAH 350
>Os02g0518500
Length = 492
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 25/184 (13%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L + +LA + + C +C KGF+RD NL++H RGH +K K S A
Sbjct: 52 VVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWKL--------KQRSSTEAK 103
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP + C H + L + +K HY R H +K + C RC +KK++V +D K
Sbjct: 104 KKVYVCPEITCP---HHDATRALGDLTGIKKHYSRKHGEKKWKCDRC-SKKYAVQSDWKA 159
Query: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGASEQPQGSEAMNT 447
H K CG ++ C CGT FSRKD H A AL D +V + ++ T
Sbjct: 160 HTKICGTKEYRCDCGTIFSRKDSFITHRAFCD----ALAEDTSRV---------NHSLAT 206
Query: 448 MVGS 451
MVGS
Sbjct: 207 MVGS 210
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 276 ILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTA-AALAKPSKDSSLESAPVTRYSCP 334
++ P C +C K F R N++MHM GHG EY+ +L ++L + Y C
Sbjct: 205 LIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLKLPCYCCA 264
Query: 335 YVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGR 394
GC+ N H + +PLK ++ HYKR H K + C RC K F+V D +THEK+CG+
Sbjct: 265 -AGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRC-AKPFAVKGDWRTHEKNCGK 322
Query: 395 DKWLCSCGTTFSRKDKLFGHVALF-QGHTPA 424
+W C+CG+ F K L HV F GH P
Sbjct: 323 -RWFCACGSDFKHKRSLNDHVRSFGGGHFPV 352
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Query: 275 EILAPHTHF-CLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSC 333
+IL THF C +C K F R NL+MHM GHG +Y+ + ++ +++ P C
Sbjct: 147 QILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCF---C 203
Query: 334 PYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCG 393
GC+ N +H + +PLK ++ HYKR HC K + C +C K +V D +THEK+CG
Sbjct: 204 CAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG-KPLAVRGDWRTHEKNCG 262
Query: 394 RDKWLCSCGTTFSRKDKLFGHVALF 418
R +W C+CG+ F K L H+ F
Sbjct: 263 R-RWHCACGSDFKHKRSLKDHIRAF 286
>Os09g0307400
Length = 385
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 85/160 (53%), Gaps = 14/160 (8%)
Query: 275 EILAPHTHF-CLICGKGFKRDANLRMHMRGHGDEYKT-------AAALAKPSKDSSLESA 326
EIL T F C +C K F R N++MHM GHG +Y+ A + + +SL
Sbjct: 180 EILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAITVGGAAPPASLMRL 239
Query: 327 PVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLK 386
P Y C GC+ N EH + +PLK ++ HY+R H + Y C RC K+F+V D +
Sbjct: 240 PC--YCCA-EGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG-KRFAVRGDWR 295
Query: 387 THEKHCGRDKWLCSCGTTFSRKDKLFGHVALF-QGHTPAL 425
THEK+CG+ W C CG+ F K L HV F GH P +
Sbjct: 296 THEKNCGK-LWFCVCGSDFKHKRSLKDHVRSFGGGHAPHI 334
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L ++A + + C ICGKGF+RD NL++H RGH +K + + E
Sbjct: 60 VIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWKL-------KQRNPKEVVR 112
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP GC H + L + +K H+ R H +K + C +C +K+++V +D K
Sbjct: 113 KKVYVCPEAGC---VHHDPARALGDLTGIKKHFSRKHGEKKWKCDKC-SKRYAVHSDWKA 168
Query: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
H K CG ++ C CGT FSR+D H A
Sbjct: 169 HSKVCGTREYRCDCGTLFSRRDSFITHRAF 198
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 7/149 (4%)
Query: 275 EILAPHTHF-CLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSC 333
+IL T F C +C K F R N++MHM GHG +Y+ + ++ +++ P Y C
Sbjct: 270 QILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPC--YCC 327
Query: 334 PYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCG 393
GC+ N +H + +PLK ++ HYKR H K + C +C K F+V D +THEK+CG
Sbjct: 328 A-AGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG-KAFAVRGDWRTHEKNCG 385
Query: 394 RDKWLCSCGTTFSRKDKLFGHVALF-QGH 421
+ W C+CG+ F K L H+ F +GH
Sbjct: 386 K-LWYCACGSDFKHKRSLKDHIRAFGRGH 413
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 5/151 (3%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L ++A + C +C KGF+RD NL++H RGH +K A S ++ AP
Sbjct: 25 VIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAAPAP 84
Query: 328 VTR-YSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLK 386
R Y CP C H + L + +K H+ R H +K + C RC K+++V +D K
Sbjct: 85 RKRVYVCPEPTCV---HHDPARALGDLTGIKKHFSRKHGEKRWRCERCG-KRYAVHSDWK 140
Query: 387 THEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
H K+CG ++ C CG FSRKD L H A
Sbjct: 141 AHVKNCGTREYRCDCGILFSRKDSLLTHRAF 171
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L +LA + C +C KGF+R+ NL++H RGH +K K ++
Sbjct: 56 VVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRV----- 110
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP C H + L + +K HY R H +K + C +CN K+++V +D K
Sbjct: 111 ---YLCPEPSCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSDWKA 163
Query: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
H K CG ++ C CGT FSR+D H A
Sbjct: 164 HSKTCGTREYRCDCGTLFSRRDSFITHRAF 193
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 86/179 (48%), Gaps = 12/179 (6%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L +LA + C ICGKGF+RD NL++H RGH +K + P
Sbjct: 67 VVALSPRTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRGG--AGGGGGGEPP 124
Query: 328 VTR-YSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLK 386
R Y CP C H + L + +K H+ R H +K + C RC K+++V +D K
Sbjct: 125 RKRVYVCPEASC---VHHSPSRALGDLTGIKKHFCRKHGEKKWKCDRCG-KRYAVHSDWK 180
Query: 387 THEKHCGRDKWLCSCGTTFSRKDKLFGHVALF-----QGHTPALPMDDIKVTGASEQPQ 440
H K CG ++ C CGT FSR+D H A + + A PM+ VT A + Q
Sbjct: 181 AHSKVCGTREYKCDCGTVFSRRDSFVTHRAFCDALAQENNKLAQPMNMAAVTSALQGQQ 239
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 83/176 (47%), Gaps = 15/176 (8%)
Query: 245 EDHDVKESDDGGERENLPPG---SYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHM 301
++H ++ NLP V+ L ++A + C ICGKGF+RD NL++H
Sbjct: 21 QEHPPPPPPPAKKKRNLPGTPDPEAEVIALSPRTLMATNRFVCEICGKGFQRDQNLQLHR 80
Query: 302 RGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYK 361
RGH +K K + Y CP C H + L + +K H+
Sbjct: 81 RGHNLPWKLRQRSGKEPRKRV--------YVCPEKSC---VHHNPSRALGDLTGIKKHFC 129
Query: 362 RSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
R H +K + C +C +K+++V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 130 RKHGEKKWKCDKC-SKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAF 184
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 7/139 (5%)
Query: 275 EILAPHTHF-CLICGKGFKRDANLRMHMRGHGDEYKTAAALA-KPSKDSSLESAPVTRYS 332
+ILA T F C +C K F R NL+MHM GHG +Y+ A + ++ +++ P Y
Sbjct: 52 QILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAALRGAQPTAMLRLPC--YC 109
Query: 333 CPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHC 392
C GC+ + +H + +PLK ++ HY+R H + + C RC K+F+V D +THEK+C
Sbjct: 110 CA-AGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRC-AKRFAVRGDWRTHEKNC 167
Query: 393 GRDKWLCSCGTTFSRKDKL 411
GR W C+CG F K L
Sbjct: 168 GR-LWRCACGAHFRHKRSL 185
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L ++A + C +C KGF+R+ NL++H RGH +K K + + A
Sbjct: 62 VIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL--------KQKNPKEAR 113
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP C H + L + +K HY R H +K + C +C +K+++V +D K
Sbjct: 114 RRVYLCPEPSCV---HHDPSRALGDLTGIKKHYCRKHGEKKWRCDKC-SKRYAVQSDWKA 169
Query: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
H K CG ++ C CGT FSR+D H A
Sbjct: 170 HSKTCGTREYRCDCGTLFSRRDSFITHRAF 199
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 11/161 (6%)
Query: 257 ERENLPPGSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAK 316
++ LP V+ L + +LA + C +C KGF+R+ NL++H RGH +K
Sbjct: 70 KKRTLPDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL------ 123
Query: 317 PSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNT 376
+ + L++ Y CP C H + L + +K H+ R H +K + C +C +
Sbjct: 124 -KQKNPLQAQRRRVYLCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-S 178
Query: 377 KKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
K+++V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 179 KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAF 219
>AK067268
Length = 324
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L +LA + C +C KGF+R+ NL++H RGH +K K ++
Sbjct: 56 VVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRRV----- 110
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP C H + L + +K HY R H +K + C +CN K+++V +D K
Sbjct: 111 ---YLCPEPSCV---HHDPSRALGNLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSDWKA 163
Query: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
H K CG ++ C CGT FSR+D H A
Sbjct: 164 HSKTCGTREYRCDCGTLFSRRDSFITHRAF 193
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 277 LAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYV 336
+A + C ICGKGF+RD NL++H RGH +K + S E+ Y CP
Sbjct: 1 MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKL-------KQRGSKEAVRKKVYICPEA 53
Query: 337 GCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDK 396
C H + L + +K H+ R H +K + C +C +KK++V +D K H K CG +
Sbjct: 54 SCV---HHDPSRALGDLTGIKKHFFRKHGEKKWKCDKC-SKKYAVHSDWKAHSKICGTRE 109
Query: 397 WLCSCGTTFSRKDKLFGHVAL 417
+ C CGT FSR+D H A
Sbjct: 110 YKCDCGTIFSRRDSFITHRAF 130
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 11/150 (7%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L + +LA + C +C KGF+R+ NL++H RGH +K + + ++
Sbjct: 83 VIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKL-------KQKNPAQAQR 135
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP C H + L + +K H+ R H +K + C +C +K+++V +D K
Sbjct: 136 RRVYLCPEPTCV---HHDPARALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKA 191
Query: 388 HEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
H K CG ++ C CGT FSR+D H A
Sbjct: 192 HSKICGTREYRCDCGTLFSRRDSFITHRAF 221
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 12/140 (8%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L + +LA + C IC KGF+RD NL++H RGH +K K +
Sbjct: 28 VIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEVRKRV----- 82
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKT 387
Y CP C H + L + +K H+ R H +K + C +C +KK++V +D K
Sbjct: 83 ---YVCPEPTC---VHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQSDWKA 135
Query: 388 HEKHCGRDKWLCSCGTTFSR 407
H K CG ++ C CGT FSR
Sbjct: 136 HTKTCGSREYRCDCGTLFSR 155
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 297 LRMHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCV 356
++MHM GHG +Y+ + + +++ P Y C GC+ N +H + +PLK +
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPC--YCCA-AGCRNNIDHPRARPLKDFRTL 57
Query: 357 KNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVA 416
+ HYKR H K + C +C K F+V D +THEK+CG+ W C CG+ F K L H
Sbjct: 58 QTHYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGKL-WYCLCGSEFKHKRSLKDHAR 115
Query: 417 LFQGH 421
F GH
Sbjct: 116 AF-GH 119
>Os09g0485600 Similar to WIP1 protein (Fragment)
Length = 154
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 299 MHMRGHGDEYKTAAALAKPSKDSSLESAPVTRYSCPYVGCKRNKEHKKFQPLKTILCVKN 358
MHM GHG +Y+ + + +++ P Y C GC+ N +H + +PLK ++
Sbjct: 2 MHMWGHGSQYRKGPESLRGIQPTAMLRLPC--YCCA-AGCRNNIDHPRAKPLKDFRTLQT 58
Query: 359 HYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALF 418
HYKR H K + C +C K F+V D +THEK+CG+ W C CG+ F K L H F
Sbjct: 59 HYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGK-LWYCLCGSEFKHKRSLKDHARAF 116
>Os09g0449400 Zinc finger, C2H2-type domain containing protein
Length = 164
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
V+ L +L + C IC +GF+RD NL+MH R H +K K + E+A
Sbjct: 35 VVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLL-------KREAGEAAR 87
Query: 328 VTRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHC-DKSYTCSRCNTKKFSVIADLK 386
+ CP C H L ++ +K H++R H + + C+RC +K ++V +D K
Sbjct: 88 KRVFVCPEPTCL---HHDPSHALGDLVGIKKHFRRKHSGHRQWACARC-SKAYAVHSDYK 143
Query: 387 THEKHCGRDKWLCSCGTTFSR 407
H K CG C CG FSR
Sbjct: 144 AHLKTCGTRGHSCDCGRVFSR 164
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 20,127,743
Number of extensions: 933904
Number of successful extensions: 1904
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1845
Number of HSP's successfully gapped: 29
Length of query: 522
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 417
Effective length of database: 11,553,331
Effective search space: 4817739027
Effective search space used: 4817739027
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 158 (65.5 bits)