BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0839700 Os01g0839700|AK112030
(169 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0839700 Similar to Ubiquitin carrier protein 315 9e-87
Os05g0460200 Similar to Ubiquitin carrier protein 301 2e-82
Os05g0182500 Rad6 (Ubiquitin carrier protein) 122 1e-28
Os07g0166800 Rad6 (Ubiquitin carrier protein) 121 2e-28
Os03g0791800 Rad6 (Ubiquitin carrier protein) 120 7e-28
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 96 1e-20
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 95 2e-20
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 93 8e-20
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 93 1e-19
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 93 1e-19
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 93 1e-19
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 92 1e-19
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 89 2e-18
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 86 2e-17
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 84 3e-17
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 84 5e-17
AK102646 78 3e-15
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 77 6e-15
Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (... 75 2e-14
Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme Ubc... 74 4e-14
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 74 6e-14
Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (... 73 8e-14
Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (... 70 7e-13
Os01g0925800 Similar to Ubiquitin conjugating enzyme 64 4e-11
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 64 4e-11
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 315 bits (807), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 153/169 (90%), Positives = 153/169 (90%)
Query: 1 MAATIXXXXXXXXXXXXXXXXHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAI 60
MAATI HPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAI
Sbjct: 1 MAATISQASLLLQKQLKDLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAI 60
Query: 61 MSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVE 120
MSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVE
Sbjct: 61 MSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVE 120
Query: 121 SIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML 169
SIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML
Sbjct: 121 SIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML 169
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 301 bits (770), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 141/148 (95%), Positives = 147/148 (99%)
Query: 22 HPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMW 81
+PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIM+FPQNYPNSPP+VRFTSEMW
Sbjct: 22 NPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRFTSEMW 81
Query: 82 HPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANI 141
HPNVYPDGRVCISILHPPG+DPNGYELASERWTPVHTVESIVLSIISMLS PNDESPANI
Sbjct: 82 HPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANI 141
Query: 142 EAAKEWREKRDDFKKKVRRLVRKSQEML 169
EAAK+WREKRDDFKKKVRR+VRKSQEML
Sbjct: 142 EAAKDWREKRDDFKKKVRRIVRKSQEML 169
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (306), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 29 AGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPD 88
+G D+N+ W I GP DT +DGG F + F ++YPN PPTVRF S M+HPN+Y D
Sbjct: 25 SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84
Query: 89 GRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWR 148
G +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ +
Sbjct: 85 GSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFS 131
Query: 149 EKRDDFKKKVRRLVRKS 165
E + ++ +KVR +V +S
Sbjct: 132 ENKREYNRKVREIVEQS 148
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 83/137 (60%), Gaps = 13/137 (9%)
Query: 29 AGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPD 88
+G D+N+ W I GP DT +DGG F + F ++YPN PPTVRF S M+HPN+Y D
Sbjct: 25 SGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYAD 84
Query: 89 GRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWR 148
G +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ +
Sbjct: 85 GSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFS 131
Query: 149 EKRDDFKKKVRRLVRKS 165
E + ++ +KVR +V +S
Sbjct: 132 ENKREYNRKVREIVEQS 148
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 120 bits (300), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 82/137 (59%), Gaps = 13/137 (9%)
Query: 29 AGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPD 88
+G D+N+ W I GP DT +DGG F + F ++YPN PP VRF S M+HPN+Y D
Sbjct: 25 SGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPVVRFVSRMFHPNIYAD 84
Query: 89 GRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWR 148
G +C+ IL +W+P++ V +I+ SI S+L PN SPAN EAA+ +
Sbjct: 85 GSICLDILQ-------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFS 131
Query: 149 EKRDDFKKKVRRLVRKS 165
E + ++ +KVR +V +S
Sbjct: 132 ENKREYNRKVREIVEQS 148
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 14/142 (9%)
Query: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
P SAG + ++F WQ TI+GPPD+ Y GG F + FP +YP PP V F ++++H
Sbjct: 17 PPTSCSAGPAGE-DMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFH 75
Query: 83 PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
PN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E
Sbjct: 76 PNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 143 AAKEWREKRDDFKKKVRRLVRK 164
A ++ R ++ R +K
Sbjct: 123 IAHMYKTDRPKYETTARSWTQK 144
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 14/131 (10%)
Query: 33 DDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVC 92
+ N+F W TI G T Y+G + ++FP YP PP VRF + +HPNV G +C
Sbjct: 72 EGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYKPPKVRFETPCFHPNVDAHGNIC 131
Query: 93 ISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRD 152
+ IL ++W+ + V +I+LSI S+L PN++SP N +AA W +D
Sbjct: 132 LDILQ-------------DKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQAAALW-PNQD 177
Query: 153 DFKKKVRRLVR 163
+F+K V +L +
Sbjct: 178 EFRKMVEKLYK 188
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 93.2 bits (230), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 14/142 (9%)
Query: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
P SAG + ++F WQ TI+GP D+ Y GG F + FP +YP PP V F ++++H
Sbjct: 17 PPTSCSAGPAGE-DLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFKPPKVNFQTKVYH 75
Query: 83 PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
PN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E
Sbjct: 76 PNINSNGSICLDIL-------------KEQWSPALTISKVLLSISSLLTDPNPDDPLVPE 122
Query: 143 AAKEWREKRDDFKKKVRRLVRK 164
A ++ +R +++ R +K
Sbjct: 123 IAHVYKSQRPRYEETARAWTQK 144
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
P SAG V D ++F WQ TI+GP D+ Y GG F + FP +YP PP V F ++++H
Sbjct: 17 PPTSCSAGPVSD-DMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPFKPPKVAFKTKVFH 75
Query: 83 PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
PN+ +G +C+ IL ++W+P T+ ++LSI S+L+ PN + P E
Sbjct: 76 PNINSNGNICLDIL-------------KDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 143 AAKEWREKRDDFKKKVRRLVRK 164
A + R ++ R +K
Sbjct: 123 IAHMCKTDRLRYESTARGWTQK 144
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
P SAG V + ++F WQ T++GP D+ Y GG F + FP +YP PP V ++++H
Sbjct: 17 PPTSCSAGPVAE-DMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVALKTKVFH 75
Query: 83 PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
PN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E
Sbjct: 76 PNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 143 AAKEWREKRDDFKKKVRRLVRK 164
A ++ R ++ R +K
Sbjct: 123 IAHMYKTDRAKYESTARSWTQK 144
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 14/142 (9%)
Query: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
P SAG V + ++F WQ TI+GP D+ Y GG F + FP +YP PP V F ++++H
Sbjct: 17 PPTSCSAGPVGE-DMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFH 75
Query: 83 PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
PN+ +G +C+ IL ++W+P T+ ++LSI S+L+ PN + P E
Sbjct: 76 PNINSNGSICLDIL-------------KDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 143 AAKEWREKRDDFKKKVRRLVRK 164
A ++ R ++ R ++
Sbjct: 123 IAHMYKTDRHKYENTARTWTQR 144
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 77/142 (54%), Gaps = 14/142 (9%)
Query: 23 PVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWH 82
P SAG V + ++F WQ TI+GP D+ + GG F + FP +YP PP V F ++++H
Sbjct: 17 PPTSCSAGPVGE-DMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFH 75
Query: 83 PNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
PN+ +G +C+ IL E+W+P T+ ++LSI S+L+ PN + P E
Sbjct: 76 PNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 143 AAKEWREKRDDFKKKVRRLVRK 164
A ++ R ++ R +K
Sbjct: 123 IAHMYKTDRAKYESTARSWTQK 144
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 14/119 (11%)
Query: 31 LVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNV-YPDG 89
+ DDSN+F+W I GP +T ++GG F S P+ YP PP VRF ++++HPNV + G
Sbjct: 28 ICDDSNIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVHFKTG 87
Query: 90 RVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWR 148
+C+ IL W+P T++S+ +II++++ P +SP N ++ R
Sbjct: 88 EICLDIL-------------KNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLR 133
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 35 SNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCIS 94
+N+ W TI G T ++GGY+ + F ++YP+ PP +F +HPNVYP G VC+S
Sbjct: 37 ANLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLS 96
Query: 95 ILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDF 154
IL+ W P TV+ I++ I +L PN PA + + + + ++
Sbjct: 97 ILN-----------EDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEY 145
Query: 155 KKKVRRLVRKSQEML 169
K++VR ++ +L
Sbjct: 146 KRRVRVQAKQYPALL 160
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 69/127 (54%), Gaps = 14/127 (11%)
Query: 22 HPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMW 81
P G SA + N+ + V I+GP + Y+GG F + P+ YP + P VRF ++++
Sbjct: 20 EPAPGISAS-PSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIY 78
Query: 82 HPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANI 141
HPN+ GR+C+ IL ++W+P + +++LSI ++LS PN + P +
Sbjct: 79 HPNIDKLGRICLDILK-------------DKWSPALQIRTVLLSIQALLSAPNPDDPLSD 125
Query: 142 EAAKEWR 148
AK W+
Sbjct: 126 NIAKHWK 132
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 36 NVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI 95
N+ W TI G T ++GGYF + F ++YP+ PP +F +HPNVYP G VC+SI
Sbjct: 38 NLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 96 LHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFK 155
L+ W P TV+ I++ I +L PN PA + + + ++K
Sbjct: 98 LN-----------EDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYK 146
Query: 156 KKVRRLVRK 164
++VR ++
Sbjct: 147 RRVRLQAKQ 155
>AK102646
Length = 41
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/41 (90%), Positives = 39/41 (95%)
Query: 129 MLSGPNDESPANIEAAKEWREKRDDFKKKVRRLVRKSQEML 169
M S PNDESPANIEAAK+WREKRDDFKKKVRR+VRKSQEML
Sbjct: 1 MRSSPNDESPANIEAAKDWREKRDDFKKKVRRIVRKSQEML 41
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 14/125 (11%)
Query: 36 NVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI 95
++ ++VTI P + Y GG F P YP+ PP V+ ++++HPN+ +G VC++I
Sbjct: 57 DLMNFEVTI-RPDEGYYVGGKFIFTFQVPPAYPHEPPKVKCKTKVYHPNIDLEGNVCLNI 115
Query: 96 LHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFK 155
L E W PV V +IV + + S PNDE P N EAA R+ + F+
Sbjct: 116 LR-------------EDWKPVLNVNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFE 162
Query: 156 KKVRR 160
+ V+R
Sbjct: 163 RNVQR 167
>Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19)
(Ubiquitin-protein ligase I) (Ubiquitin carrier protein
I) (SUMO-1-protein ligase) (SUMO- 1 conjugating enzyme)
(Ubiquitin carrier protein 9) (p18)
Length = 139
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 36 NVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI 95
N+ W+ I G T ++GGYF M F ++YP + P+ +F S +H NVY G VC+SI
Sbjct: 5 NLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAVCLSI 64
Query: 96 LHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPA---NIEAAKEWREKRD 152
L S W P TV I++ I + PN S A + E + WR +
Sbjct: 65 L-------------STAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRTWRSTGN 111
Query: 153 DFKKKVRRLVRKSQEML 169
F ++R +++ +
Sbjct: 112 AFVSRLRSILQLCSRAM 128
>Os02g0721100 Similar to E2 ubiquitin-conjugating enzyme UbcH5B (Fragment)
Length = 234
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 13/127 (10%)
Query: 38 FEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILH 97
F W+V I GP T Y GG F + FP +YP PP + F ++++HPN+ GR+ + I
Sbjct: 53 FHWEVVIDGPAATPYAGGVFPVDVWFPYDYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQ 112
Query: 98 PPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKK 157
+ W+P T+ ++L +S+L P + P N AK+++ + + +++K
Sbjct: 113 -------------DNWSPALTINKLLLCFVSVLFDPLLDRPTNRCIAKQYKHEYEAYEEK 159
Query: 158 VRRLVRK 164
R +K
Sbjct: 160 ARAWTQK 166
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 73.6 bits (179), Expect = 6e-14, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 23 PVDGFSAGLVDD----SNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTS 78
P G S L D S++ ++ I GP +T+Y G F + P+ YP PP V F +
Sbjct: 22 PPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKIQIPERYPFQPPNVTFVT 81
Query: 79 EMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESP 138
++HPN+ GR+C+ IL+ P P G W P + +++ SI +LS PN +
Sbjct: 82 PIYHPNIDNGGRICLDILNLP---PKG------AWQPSLNIATVLTSIGLLLSDPNPDDG 132
Query: 139 ANIEAAKEWREKRDDFKKKVRRLVRK 164
E ++E++ R F R K
Sbjct: 133 LMAEISREYKYNRQVFDINARSWTEK 158
>Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 73.2 bits (178), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 13/115 (11%)
Query: 45 IGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISILHPPGDDPN 104
+ P + Y GG F + P YP+ PP V+ T++++HPN+ DG VC++IL
Sbjct: 65 LRPDEGYYVGGAFVFTLQVPPTYPHEPPKVKCTTKVYHPNIDLDGNVCLNILR------- 117
Query: 105 GYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFKKKVR 159
E W PV + +IV + + PNDE P N +AA R+ F++ V+
Sbjct: 118 ------EDWKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRNVQ 166
>Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 150
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 16/128 (12%)
Query: 33 DDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVC 92
DD FE I+ P + Y GG F +YP+ PP V+ ++++HPN+ +G VC
Sbjct: 23 DDLMNFE---IIVRPDEGYYLGGTFVFTFQVSPSYPHEPPKVKCKTKVYHPNIDLEGNVC 79
Query: 93 ISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRD 152
++IL E W PV + +++ + + + PNDE P N EAA R+
Sbjct: 80 LNILR-------------EDWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAVLRDNPK 126
Query: 153 DFKKKVRR 160
F+ V+R
Sbjct: 127 LFEANVKR 134
>Os01g0925800 Similar to Ubiquitin conjugating enzyme
Length = 195
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 24 VDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHP 83
V G S L D S + TI GP T Y+GG F + P YP PP ++F +++WHP
Sbjct: 20 VSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHP 79
Query: 84 NVYP-DGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIE 142
N+ +G +C+ IL ++W+P T+++ +LS+ ++LS P + P +
Sbjct: 80 NISSQNGAICLDILK-------------DQWSPALTLKTALLSLQALLSAPAPDDPQDAV 126
Query: 143 AAKEWREKRDDFKKKVR 159
A+++ F R
Sbjct: 127 VAQQYLRDYSTFSATAR 143
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 28 SAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYP 87
SAG D N++ W TIIGP + Y+GG F + FP +YP PP V F + ++H NV
Sbjct: 77 SAGPKGD-NLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFKPPMVTFKTRIYHCNVDS 135
Query: 88 DGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESP 138
G + + IL E W+P T+ ++L+I ++++ P+ P
Sbjct: 136 TGNLSMDILR-------------EGWSPALTISKVLLAIKAIITNPDPYCP 173
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,603,602
Number of extensions: 301903
Number of successful extensions: 736
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 725
Number of HSP's successfully gapped: 27
Length of query: 169
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 75
Effective length of database: 12,127,685
Effective search space: 909576375
Effective search space used: 909576375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)