BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0231000 Os01g0231000|AK066156
(263 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 363 e-101
Os06g0335500 AUX/IAA protein family protein 208 4e-54
Os05g0559400 Similar to IAA11 (Fragment) 187 5e-48
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 178 3e-45
Os03g0742900 Aux /IAA protein 176 2e-44
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 168 3e-42
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 153 1e-37
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 142 2e-34
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 135 3e-32
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 131 5e-31
Os07g0182400 AUX/IAA protein family protein 130 8e-31
Os02g0817600 AUX/IAA protein family protein 126 2e-29
Os03g0633800 Similar to IAA6 (Fragment) 126 2e-29
Os06g0597000 Similar to Auxin responsive protein IAA-Re 121 5e-28
Os03g0797800 AUX/IAA protein family protein 111 7e-25
Os09g0527700 Similar to Auxin-induced protein IAA4 104 6e-23
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 103 2e-22
Os05g0523300 Similar to IAA8 (Fragment) 102 4e-22
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 97 9e-21
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 96 3e-20
Os08g0109400 AUX/IAA protein family protein 92 3e-19
Os06g0355300 80 1e-15
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 80 2e-15
Os02g0723400 AUX/IAA protein family protein 77 9e-15
Os06g0166500 Similar to Auxin-responsive protein IAA20 (Ind... 75 7e-14
Os01g0286900 Similar to Auxin-responsive protein IAA31 (Ind... 70 2e-12
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 363 bits (933), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/263 (75%), Positives = 199/263 (75%)
Query: 1 MSPPLELDYIGLXXXXXXXXXXXXXXXRADDVDLKGTELRLGLPGSESPDRRPXXXXXXX 60
MSPPLELDYIGL RADDVDLKGTELRLGLPGSESPDRRP
Sbjct: 1 MSPPLELDYIGLSPPPPPPSSSSAAAARADDVDLKGTELRLGLPGSESPDRRPAAIAAAA 60
Query: 61 XXXXXLELLPAKGAKRVFPDEAALTPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
LELLPAKGAKRVFPDEAALTPPT
Sbjct: 61 ATATTLELLPAKGAKRVFPDEAALTPPTAAAGKGKAAREGEEVGAEEEDKKVAAPPQPAA 120
Query: 121 XXXXXGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYK 180
GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYK
Sbjct: 121 KAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYK 180
Query: 181 NYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL 240
NYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL
Sbjct: 181 NYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRL 240
Query: 241 RIMKGSDAIGLAPRAGEKSKNRN 263
RIMKGSDAIGLAPRAGEKSKNRN
Sbjct: 241 RIMKGSDAIGLAPRAGEKSKNRN 263
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/283 (48%), Positives = 148/283 (52%), Gaps = 37/283 (13%)
Query: 1 MSPPLELDYIGLXXXXXXXXXXXXXXXRADDVDLKGTELRLGLPGSESPDRRPXXXXXXX 60
M+PP E DYIGL TELRLGLPG+
Sbjct: 1 MAPPQERDYIGLSPAAAAALA---------------TELRLGLPGTAEEAESEGGGGGGT 45
Query: 61 XXX-XXLELLPAKGAKRVFPDEAALTPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 119
LELLP GAKR F D A + P
Sbjct: 46 DAAPLTLELLPKGGAKRGFAD-AIVGGPAGQRREAAGGKAAAAAAEAEEEEEKKKAQAPA 104
Query: 120 XXXXXXGWPPIRSYRKNTMATNQ-IKSNKEDVDAKQG--QGFLYVKVSMDGAPYLRKVDL 176
GWPPIRSYRKNTMA +Q K+D +AKQ G LYVKVSMDGAPYLRKVDL
Sbjct: 105 AKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDL 164
Query: 177 KTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDG----------------EYVLTYEDKDG 220
K YKNYK++SL LEKMF F+ G G N K G E VLTYEDKD
Sbjct: 165 KMYKNYKELSLALEKMFSCFTVG-HGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDE 223
Query: 221 DWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
DWMLVGDVPW MFTDSCRRLRIMKGSDA+GLAPRA +KSKNRN
Sbjct: 224 DWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 142/281 (50%), Gaps = 26/281 (9%)
Query: 1 MSPPLEL-DYIGLXXXXXXXXXXXXXXXRADDVDLKGTELRLGLPGSESPDRRPXXXXXX 59
M PPLE DYIGL +V LRLGLPGSESP R
Sbjct: 1 MPPPLEARDYIGLAASPASSSSSCCASTPVAEVVGAHLALRLGLPGSESPAR---AEAEA 57
Query: 60 XXXXXXLELLPAK----GAKRVFPDEAALTPPTXXXXXX--XXXXXXXXXXXXXXXXXXX 113
L L PA GAKR F D +
Sbjct: 58 VVVDAALTLGPAPPPRGGAKRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAA 117
Query: 114 XXXXXXXXXXXXGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRK 173
GWPP+RSYRKNT+A + K+ ED K G YVKVSMDGAPYLRK
Sbjct: 118 AGAPRAAKAQVVGWPPVRSYRKNTLAASATKTKGED-QGKSEVGCCYVKVSMDGAPYLRK 176
Query: 174 VDLKTYKNYKDMSLGLEKMFIGFSTGKEG---------------AENQKDGEYVLTYEDK 218
VDLKTY +Y+D+SL LEKMF F TG+ A+ KD EYVLTYEDK
Sbjct: 177 VDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDK 236
Query: 219 DGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKS 259
D DWMLVGD+PW++FT SCR+LRIM+GSDA G+APR+ E++
Sbjct: 237 DADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQT 277
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 146/283 (51%), Gaps = 40/283 (14%)
Query: 1 MSPPLE-LDYIGLXXXXXXXXXXXXXXXRADDV--DLKGTEL--RLGLPGSESPDRRPXX 55
MSPPLE DYIGL + + + +G L RLGLPGSESP+R
Sbjct: 1 MSPPLEPHDYIGLSAAAASPTPSSSSCSSSPNPGGEARGPRLTLRLGLPGSESPERE--- 57
Query: 56 XXXXXXXXXXLELLP----AKGAKRVFPDEAALTPPTXXXXXXXXXXXXXXXXXXXXXXX 111
L LP +KR FPD +
Sbjct: 58 ---VVAAGLTLGPLPPTTTKAASKRAFPDSSP---------RHGASSGSVAAAAACQDKA 105
Query: 112 XXXXXXXXXXXXXXGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYL 171
GWPP+R+YRKNT+A + K ED +G G LYVKVSMDGAPYL
Sbjct: 106 APAAAPPAAKAQVVGWPPVRNYRKNTLAASASKGKGEDKGTAEG-GPLYVKVSMDGAPYL 164
Query: 172 RKVDLKTYKNYKDMSLGLEKMFIGFSTGKEG---------------AENQKDGEYVLTYE 216
RKVDLK Y +Y+D+S+ LEKMF F TG+ G A+ +D EYVLTYE
Sbjct: 165 RKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYE 224
Query: 217 DKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKS 259
DKD DWMLVGD+PW++FT CR+L+IM+GSDA G+APR+ E+S
Sbjct: 225 DKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 267
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 85/148 (57%), Positives = 103/148 (69%), Gaps = 10/148 (6%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQ----------GFLYVKVSMDGAPYLRKVD 175
GWPP+RS+R+N M +KS KE+ KQ Q +VKVSMDGAPYLRKVD
Sbjct: 89 GWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKVD 148
Query: 176 LKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTD 235
LK Y +YKD+SL L+KMF F+ + V TYEDKDGDWMLVGDVPW+MF +
Sbjct: 149 LKMYNSYKDLSLALQKMFGTFTATGNNMNEVNGSDAVTTYEDKDGDWMLVGDVPWQMFVE 208
Query: 236 SCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
SC+RLRIMKGS+AIGLAPRA +K KN++
Sbjct: 209 SCKRLRIMKGSEAIGLAPRAKDKYKNKS 236
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 104/156 (66%), Gaps = 19/156 (12%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFL------YVKVSMDGAPYLRKVDLKTY 179
GWPP+RSYRKN +A Q K+ D + +VKVSMDGAPYLRKVDLK Y
Sbjct: 123 GWPPVRSYRKNILAV-QADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMY 181
Query: 180 KNYKDMSLGLEKMFIGFSTGKEG------------AENQKDGEYVLTYEDKDGDWMLVGD 227
K+Y ++S LEKMF F+ G G A+ EYV TYEDKDGDWMLVGD
Sbjct: 182 KSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGD 241
Query: 228 VPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
VPWEMF +SC+RLRIMKGS+AIGLAPRA EK KNR+
Sbjct: 242 VPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 92/139 (66%), Gaps = 21/139 (15%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDM 185
GWPP+RS+RKN +A ++ + VKVSMDGAPYLRK+D+ YK+Y ++
Sbjct: 103 GWPPVRSFRKNVLA-------------EKCKAAALVKVSMDGAPYLRKIDVAMYKSYPEL 149
Query: 186 SLGLEKMFIGFSTGKEGAENQ--------KDGEYVLTYEDKDGDWMLVGDVPWEMFTDSC 237
S+ + MF F+ GK G+ Q D EYV TYEDKDGDWMLVGDVPWEMF +SC
Sbjct: 150 SMAFQNMFTSFTIGKCGSHQQLKESNKLRDDLEYVPTYEDKDGDWMLVGDVPWEMFVESC 209
Query: 238 RRLRIMKGSDAIGLAPRAG 256
+RLRIMKGS+AIGL G
Sbjct: 210 KRLRIMKGSEAIGLGHTKG 228
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 110/238 (46%), Gaps = 57/238 (23%)
Query: 33 DLKGTELRLGLPGSESPDRRPXXXXXXXXXXXXLELLPAKGAKRVFPDEAALTPPTXXXX 92
+LK TELRLGLPG+E P P G+KR E
Sbjct: 3 NLKATELRLGLPGTEEEAAPPPST-------------PRAGSKRALAGEP---------- 39
Query: 93 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWPPIRSYRKNTMATNQIK-------- 144
GWPP+RSYRK+ +
Sbjct: 40 -----------------DQAKIKPAAAAKAQVVGWPPVRSYRKSCLQPTTTTTKSKPPPA 82
Query: 145 ------SNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFST 198
KEDV G G L+VKVSMDGAPYLRK+DLK YK Y+++ LE MF+ FS
Sbjct: 83 AAAAETQQKEDV---AGAGGLFVKVSMDGAPYLRKIDLKVYKGYRELREALEAMFLCFSG 139
Query: 199 GKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAG 256
G ++ +TYEDKDGD MLVGDVP+EMF +C+RLRIMKGS+A GL G
Sbjct: 140 GAAADAAVNPSDFAVTYEDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGLGATRG 197
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 88/139 (63%), Gaps = 25/139 (17%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDM 185
GWPP+RS+RKN +A +VKV++DGAPYLRKVDL+ Y Y +
Sbjct: 79 GWPPVRSFRKNALAAK------------------FVKVAVDGAPYLRKVDLEAYSGYDQL 120
Query: 186 SLGLEKMFIGFSTGKEGAENQKD-------GEYVLTYEDKDGDWMLVGDVPWEMFTDSCR 238
L+ F T ++ A++++ EYV TYEDKDGDWMLVGDVPW+MF ++C+
Sbjct: 121 LRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQ 180
Query: 239 RLRIMKGSDAIGLAPRAGE 257
RLR+MK S+A+ LAPRA +
Sbjct: 181 RLRLMKSSEAVNLAPRAAQ 199
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 16/138 (11%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDM 185
GWPP+R++RKN +A S+ + +VKV++DGAPYLRKVDL+ Y+ Y +
Sbjct: 84 GWPPVRAFRKNALAALAAASSSKAK---------FVKVAVDGAPYLRKVDLEAYRGYDQL 134
Query: 186 SLGLE-KMFIGFSTGKEGAENQK------DGEYVLTYEDKDGDWMLVGDVPWEMFTDSCR 238
L+ K F F+ K G E K EYV TYEDKDGDWMLVGDVPW+MF ++C+
Sbjct: 135 LAALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQ 194
Query: 239 RLRIMKGSDAIGLAPRAG 256
RLR+MK S+A+ LAPR+
Sbjct: 195 RLRLMKSSEAVNLAPRSA 212
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 68/130 (52%), Positives = 85/130 (65%), Gaps = 9/130 (6%)
Query: 126 GWPPIRSYRKNTMATNQI------KSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTY 179
GWPP+R+YR+NT K E +Q G LYVKVSMDGAPYLRKVDLK
Sbjct: 91 GWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMC 150
Query: 180 KNYKDMSLGLEKMFI-GFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCR 238
K Y+++ L+ +F FS ++ DG++ + YEDKDGD MLVGDVPWEMF SC+
Sbjct: 151 KGYRELREALDLLFTKCFSA--TASDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCK 208
Query: 239 RLRIMKGSDA 248
+LRIMKGS+A
Sbjct: 209 KLRIMKGSEA 218
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 87/154 (56%), Gaps = 26/154 (16%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQ------------------GQGFLYVKVSMDG 167
GWPPIR +R N++ NQ K N + D K+ G+ +VKV+MDG
Sbjct: 113 GWPPIRQFRMNSLF-NQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDG 171
Query: 168 APYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKD-------GEYVLTYEDKDG 220
RKVDL +++YK ++L LE MF S G + N EY LTYED+DG
Sbjct: 172 EVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAEYQLTYEDRDG 231
Query: 221 DWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPR 254
DWMLVGDVPWEMF S +RLRIM+ SDA GL R
Sbjct: 232 DWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 265
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 91/153 (59%), Gaps = 27/153 (17%)
Query: 126 GWPPIRSYRKNTMATNQIK-----------SNKEDVDAKQG------------QGFLYVK 162
GWPP+RSYRK+ +NK++ K G VK
Sbjct: 73 GWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVK 132
Query: 163 VSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDW 222
VSMDGAPYLRK+DL+ YK Y+++ LE MF+ FS +GA E+ +TY+DKDGD
Sbjct: 133 VSMDGAPYLRKIDLRMYKGYRELREALEAMFVCFSGAADGAN---PSEFAITYQDKDGDL 189
Query: 223 MLVGDVPWEMFTDSCRRLRIMKGSDAIGL-APR 254
MLVGDVP++MFT +C++LRIMK S+A GL +PR
Sbjct: 190 MLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPR 222
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 23/143 (16%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDM 185
GWPP+R+YR+N + + ++ VKV++DGAPYLRKVDL + Y +
Sbjct: 64 GWPPVRAYRRNALREDSARAK-------------LVKVAVDGAPYLRKVDLAAHAGYAPL 110
Query: 186 SLGLEKMFIGFSTGKEGAENQKD----------GEYVLTYEDKDGDWMLVGDVPWEMFTD 235
L MF + G + EYV TYEDKDGDWMLVGDVPW+MF +
Sbjct: 111 LRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVE 170
Query: 236 SCRRLRIMKGSDAIGLAPRAGEK 258
SC+R+R+MK S+A+ L+PR +
Sbjct: 171 SCKRIRLMKSSEAVNLSPRRSSR 193
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 78/132 (59%), Gaps = 13/132 (9%)
Query: 126 GWPPIRSYRKNTM---------ATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDL 176
GWPP+ SYR++T A + D K G LYVKVSMDGAPYLRKVDL
Sbjct: 69 GWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKVDL 128
Query: 177 KTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDS 236
+ Y Y+++ L+ +F FS + + YEDKDGD ML GDVPW+MF S
Sbjct: 129 RMYGGYRELRDALDALFGCFSADASASAAHF----AVAYEDKDGDLMLAGDVPWDMFISS 184
Query: 237 CRRLRIMKGSDA 248
C++LRIM+GS+A
Sbjct: 185 CKKLRIMRGSEA 196
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Query: 156 QGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQKDGEYVLTY 215
Q +VKVSMDG PYLRKVD+ Y +Y ++ L MF + G + + E+ + Y
Sbjct: 43 QAAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGL--MDGYGEWEHAVVY 100
Query: 216 EDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRA 255
ED DGDWMLVGDVPWEMF SC+R+R+M+ +A GL+ A
Sbjct: 101 EDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 89/143 (62%), Gaps = 21/143 (14%)
Query: 126 GWPPIRSYRKN----TMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKN 181
GWPP+R++R+N + A+ ++++ K+ A++ + ++K++MDG P RK+DL + +
Sbjct: 141 GWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAFDS 200
Query: 182 YKDMSLGLEKMFIGFSTGKE-----GAEN--QKD----------GEYVLTYEDKDGDWML 224
Y+ +SL ++K+F G + GA++ Q+D GEY L YED +GD +L
Sbjct: 201 YEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVL 260
Query: 225 VGDVPWEMFTDSCRRLRIMKGSD 247
VGDVPW MF S +RLR++K SD
Sbjct: 261 VGDVPWGMFVSSVKRLRVLKTSD 283
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 87/156 (55%), Gaps = 28/156 (17%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKE----DVDAKQ---GQGFLYVKVSMDGAPYLRKVDLKT 178
GWPPIRS+R+N + K + E + D K + VK++MDG P RKVDL+
Sbjct: 170 GWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQI 229
Query: 179 YKNYKDMSLGLEKMFIGF----------STGKEGAENQ-------KDGEYVLTYEDKDGD 221
Y +Y+ +S +E++F GF +G++GAE++ G Y L YED DGD
Sbjct: 230 YDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGD 289
Query: 222 WMLVGDVPWEMFTDSCRRLRIMKGS----DAIGLAP 253
ML GD+PW++F + +RLR+M+ S D IG P
Sbjct: 290 RMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 85/146 (58%), Gaps = 24/146 (16%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKE----DVDAK---QGQGFLYVKVSMDGAPYLRKVDLKT 178
GWPPIRS+R+N +++ K + E + +AK + VK++MDG P RK+DL
Sbjct: 178 GWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLAA 237
Query: 179 YKNYKDMSLGLEKMFIGF----------STGKEGAENQ-------KDGEYVLTYEDKDGD 221
Y +Y +S ++++F GF ++GA+++ GEY L YED +GD
Sbjct: 238 YNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEGD 297
Query: 222 WMLVGDVPWEMFTDSCRRLRIMKGSD 247
MLVGDVPW++F + +RLR+++ S+
Sbjct: 298 RMLVGDVPWKVFVSTAKRLRVLRSSE 323
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 32/149 (21%)
Query: 127 WPPIRSYRKN-----------------TMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAP 169
WPP+RS+R+N + N K++K D A++G ++VK++MDG P
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASK-DGGAEKG---MFVKINMDGVP 129
Query: 170 YLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQK-----------DGEYVLTYEDK 218
RKVDL Y Y +S ++K+F G + A + + GEY L YED
Sbjct: 130 IGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDD 189
Query: 219 DGDWMLVGDVPWEMFTDSCRRLRIMKGSD 247
+GD MLVGDVPW+MF + +RLR++K SD
Sbjct: 190 EGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 78/143 (54%), Gaps = 24/143 (16%)
Query: 126 GWPPIRSYRKN----------------TMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAP 169
GWPP+R++RKN + +++ ++ ++ ++VKV+++G
Sbjct: 95 GWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYA 154
Query: 170 YLRKVDLKTYKNYKDMSLGLEKMFIGF-----STGKEGAENQKDGE---YVLTYEDKDGD 221
RK+DLK +++Y +S L+ MF GF +T + ++G YVL YED +GD
Sbjct: 155 VGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKKRYVLVYEDNEGD 214
Query: 222 WMLVGDVPWEMFTDSCRRLRIMK 244
MLVGDVPWE+F S +RL I +
Sbjct: 215 RMLVGDVPWELFIASVKRLYIAQ 237
>Os06g0355300
Length = 149
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 69/130 (53%), Gaps = 24/130 (18%)
Query: 126 GWPPIRSYRKNTM----------------ATNQIKSNKEDVDAKQGQGFLYVKVSMDGAP 169
GWPP+R++RKN +++ +++ ++ ++VKV+++G
Sbjct: 15 GWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEGYA 74
Query: 170 YLRKVDLKTYKNYKDMSLGLEKMFIGF-STGKEGAENQ-------KDGEYVLTYEDKDGD 221
RK+DLK +++Y +S L+ MF GF S G +N+ YVL YED +GD
Sbjct: 75 VGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDNEGD 134
Query: 222 WMLVGDVPWE 231
MLVGDVPWE
Sbjct: 135 RMLVGDVPWE 144
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 22/122 (18%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDM 185
GWPP+ S R+ N YVKV +G RKVDL + +Y ++
Sbjct: 78 GWPPVSSARRACGGAN------------------YVKVKKEGDAIGRKVDLALHSSYDEL 119
Query: 186 SLGLEKMF-IGFSTGKEGAENQKDGEY---VLTYEDKDGDWMLVGDVPWEMFTDSCRRLR 241
+ L +MF G++ N G+ V+TYED DGDWMLVGDVPW+ F S +RL+
Sbjct: 120 AATLARMFPTNDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLK 179
Query: 242 IM 243
I+
Sbjct: 180 IL 181
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 159 LYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKE--------GAENQKDGE 210
L+VKV M+G P RK+DL YK + L MF T G + K
Sbjct: 104 LFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNK-VH 162
Query: 211 YVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSD 247
+VLTYED++GDWM+ GDVPWE+F S +RLRI + D
Sbjct: 163 HVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>Os06g0166500 Similar to Auxin-responsive protein IAA20 (Indoleacetic
acid-induced protein 20)
Length = 183
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 60/119 (50%), Gaps = 18/119 (15%)
Query: 126 GWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDM 185
GWPP++ + YVKV M+G RK+DL +Y ++
Sbjct: 81 GWPPVKCLHRRRDGGCGGG---------------YVKVKMEGLAIGRKLDLSILGSYAEL 125
Query: 186 SLGLEKMFIGFSTGKE-GAENQKDGEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIM 243
L MF ST +E G + ++ Y +TYED +GDWM VGDVPWE F S +RL+I+
Sbjct: 126 LDTLHLMFP--STNQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKIL 182
>Os01g0286900 Similar to Auxin-responsive protein IAA31 (Indoleacetic
acid-induced protein 31)
Length = 115
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 159 LYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMF---IGFSTGKEGAENQ--KDGEYVL 213
L+VKV M+G P RK+DL Y + + L MF I ++ E + + +VL
Sbjct: 21 LFVKVYMEGVPIGRKLDLLLLDGYDSLLIKLCHMFKTPITYADVMECHQQVPGQKAAHVL 80
Query: 214 TYEDKDGDWMLVGDVPWEMFTDSCRRLRIMK 244
TYED+DGDWM+VGDVPWE+F S ++LRI +
Sbjct: 81 TYEDQDGDWMMVGDVPWELFLSSVKKLRIAR 111
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,318,582
Number of extensions: 252448
Number of successful extensions: 494
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 457
Number of HSP's successfully gapped: 26
Length of query: 263
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 164
Effective length of database: 11,866,615
Effective search space: 1946124860
Effective search space used: 1946124860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 155 (64.3 bits)