Os01g0190300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin-responsive protein IAA26 (Indoleacetic acid-induced protein 26) (Phytochrome-associated protein 1).
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Os01g0190300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin-responsive protein IAA26 (Indoleacetic acid-induced protein 26) (Phytochrome-associated protein 1).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 172.94 | 0.618 | 11.2 | -1.64 | 0.757 | 2.42 | 2.62 | 2.22 | -0.12 | 7.98 | 8.432 | 5625 | -- | -- |
| 177.14 | 0.62 | 11.3 | -2.13 | 0.789 | 2.31 | 2.6 | -- | -0.252 | 7.9 | 11.48 | 5579 | -- | -- |
| 188.73 | 0.64 | 11.2 | -1.53 | 0.822 | 2.38 | -- | 2.36 | -0.125 | 6.61 | 6.291 | 5817 | -- | -- |
| 193.27 | 0.647 | 11.3 | -2.04 | 0.826 | 2.24 | -- | -- | -0.261 | 6.58 | 6.662 | 5808 | -- | -- |
| 223.69 | 0.697 | 11.2 | -1.53 | -- | 2.42 | -- | 2.36 | -0.11 | -- | 6.434 | 5724 | -- | -- |
| 264.31 | 0.762 | 11.2 | -1.01 | 0.809 | -- | 2.43 | -- | 0.234 | 7.47 | -- | -- | -- | -- |
| 276.54 | 0.779 | 11.2 | -0.967 | 0.869 | -- | -- | -- | 0.225 | 6.33 | -- | -- | -- | -- |
| 228.41 | 0.704 | 11.3 | -2.04 | -- | 2.28 | -- | -- | -0.249 | -- | 7.669 | 5703 | -- | -- |
| 251.35 | 0.738 | 11.2 | -- | 0.823 | 1.07 | -- | -- | 0.13 | 6.57 | 22.3 | 1475 | -- | -- |
| 315.7 | 0.83 | 11.2 | -0.944 | -- | -- | -- | -- | 0.243 | -- | -- | -- | -- | -- |
| 301.21 | 0.812 | 11.2 | -- | 0.855 | -- | -- | -- | 0.332 | 6.39 | -- | -- | -- | -- |
| 284.59 | 0.786 | 11.2 | -- | -- | 1.16 | -- | -- | 0.142 | -- | 22.4 | 1384 | -- | -- |
| 339.23 | 0.86 | 11.2 | -- | -- | -- | -- | -- | 0.348 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 168.61 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 2 | 168.72 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 13 | 172.08 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 14 | 172.20 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 20 | 172.31 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 25 | 172.35 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 30 | 172.40 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 34 | 172.42 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 40 | 172.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 42 | 172.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 6 |
| 44 | 172.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 65 | 172.93 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 14 | 16 |
| 72 | 173.01 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 80 | 173.06 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 14 | 5 |
| 100 | 173.12 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 14 | 13 |
| 143 | 173.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 148 | 173.44 | radiation | 10.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 159 | 173.55 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 164 | 173.59 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 186 | 173.81 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 189 | 173.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 10 |
| 190 | 173.84 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 194 | 173.86 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 238 | 174.02 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 9 | 9 |
| 284 | 174.25 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 290 | 174.28 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 296 | 174.29 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 304 | 174.33 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 16 |
| 309 | 174.34 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 313 | 174.35 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 7 |
| 331 | 174.41 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 345 | 174.44 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 16 |
| 350 | 174.46 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 359 | 174.48 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 14 | 13 |
| 366 | 174.50 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 374 | 174.52 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 396 | 174.57 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 14 | 12 |
| 444 | 174.63 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 9 | 9 |
| 488 | 174.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 13 |
| 504 | 174.73 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 544 | 174.80 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 567 | 174.85 | radiation | 10.0 | 14400 | < th | dose independent | sin | 14 | NA |
| 583 | 174.87 | wind | 5.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 585 | 174.87 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 600 | 174.89 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 18 | NA |
| 622 | 174.93 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 635 | 174.95 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 17 | NA |
| 655 | 174.99 | temperature | 25.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 684 | 175.03 | temperature | 25.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 709 | 175.06 | wind | 5.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 710 | 175.06 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 789 | 175.16 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 804 | 175.18 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 806 | 175.18 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 15 | 15 |
| 812 | 175.19 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 17 | NA |
| 917 | 175.31 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 928 | 175.32 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 932 | 175.32 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 3 |