BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0190300 Os01g0190300|AK100314
(238 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 249 1e-66
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 132 3e-31
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 120 1e-27
Os05g0523300 Similar to IAA8 (Fragment) 113 1e-25
Os03g0742900 Aux /IAA protein 96 2e-20
Os08g0109400 AUX/IAA protein family protein 96 2e-20
Os02g0817600 AUX/IAA protein family protein 96 3e-20
Os07g0182400 AUX/IAA protein family protein 91 1e-18
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 90 2e-18
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 88 6e-18
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 86 3e-17
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 85 4e-17
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 85 5e-17
Os06g0355300 84 1e-16
Os03g0797800 AUX/IAA protein family protein 83 1e-16
Os06g0597000 Similar to Auxin responsive protein IAA-Re 83 2e-16
Os09g0527700 Similar to Auxin-induced protein IAA4 82 4e-16
Os02g0723400 AUX/IAA protein family protein 78 5e-15
Os03g0633800 Similar to IAA6 (Fragment) 77 1e-14
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 249 bits (636), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 142/238 (59%), Positives = 142/238 (59%)
Query: 1 MAWRRXXXXXXXXXXXXXXXXXXXXXXXPAYFXXXXXXXXXXXXTAAPAFALRSNGTNXX 60
MAWRR PAYF TAAPAFALRSNGTN
Sbjct: 1 MAWRRGFGREEEDAAAAGESGLELCLGLPAYFSSSSSSKPSEGSTAAPAFALRSNGTNAS 60
Query: 61 XXXXXXXXXXXXXWPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMF 120
WPPVRSFRRNL NGDKASKDGGAEKGMF
Sbjct: 61 KPSGAAAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMF 120
Query: 121 VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXX 180
VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFR
Sbjct: 121 VKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGG 180
Query: 181 EYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSLMRAAGSRKRAAADS 238
EYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSLMRAAGSRKRAAADS
Sbjct: 181 EYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSLMRAAGSRKRAAADS 238
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 95/171 (55%), Gaps = 18/171 (10%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVR+FRRNL NG KA+K ++ F+KINMDGVPIGRK
Sbjct: 142 WPPVRTFRRNLATSSKASLELQ---------NGKKAAKAEEIKRAPFIKINMDGVPIGRK 192
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXX------XXXXXXXXXXXXXXXXXXXXXXEYTLVYE 187
+DL A+ Y +LS AVDKLFR EYTLVYE
Sbjct: 193 IDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYE 252
Query: 188 DDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLPPPSLMRAAGSRKRAAADS 238
D EGD++LVGDVPW MF+++ KRLRVLK+SDL SL+ + RKR AA+
Sbjct: 253 DYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDL-SSSLITSG--RKRTAAEC 300
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPP+RSFRRNL + A +K VKINMDG+PIGRK
Sbjct: 179 WPPIRSFRRNLASSSSSKHSPEPQN------DNANAKVTLTCKKNPLVKINMDGIPIGRK 232
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXX------XXXXXXXEYTLVYE 187
+DLAAY Y LS+AV +LF EYTLVYE
Sbjct: 233 IDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYE 292
Query: 188 DDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
D EGDRMLVGDVPW++F++TAKRLRVL+SS+L
Sbjct: 293 DSEGDRMLVGDVPWKVFVSTAKRLRVLRSSEL 324
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 81/153 (52%), Gaps = 12/153 (7%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPP+RSFRRNL DKA +K VKINMDG+PIGRK
Sbjct: 171 WPPIRSFRRNLTNGSSFKQSPERQNDEAD----DKAKPI--CKKRPLVKINMDGIPIGRK 224
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXX------XXXEYTLVYE 187
VDL Y Y +LS+AV++LFR YTLVYE
Sbjct: 225 VDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYE 284
Query: 188 DDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLP 220
D++GDRML GD+PW++F++T KRLRV++ S+LP
Sbjct: 285 DNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELP 317
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 67/145 (46%), Gaps = 14/145 (9%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVRSFRRN+ AS G+ FVK++MDG P RK
Sbjct: 90 WPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANAS---GSNSSAFVKVSMDGAPYLRK 146
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGDR 193
VDL Y Y LS A+ K+F + YED +GD
Sbjct: 147 VDLKMYNSYKDLSLALQKMF-----------GTFTATGNNMNEVNGSDAVTTYEDKDGDW 195
Query: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVPWQMF+ + KRLR++K S+
Sbjct: 196 MLVGDVPWQMFVESCKRLRIMKGSE 220
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGD---KASKDGGAEKGMFVKINMDGVPI 130
WPPVR+FR+NL G A+++ + MFVK+N++G +
Sbjct: 96 WPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEGYAV 155
Query: 131 GRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDE 190
GRK+DL A+ Y LS A+ +F Y LVYED+E
Sbjct: 156 GRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKK---RYVLVYEDNE 212
Query: 191 GDRMLVGDVPWQMFIATAKRLRV 213
GDRMLVGDVPW++FIA+ KRL +
Sbjct: 213 GDRMLVGDVPWELFIASVKRLYI 235
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGD-KASKDGGAEKGM---FVKINMDGVP 129
WPP+R FR N D + K+ G +KG +VK+NMDG
Sbjct: 114 WPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDGEV 173
Query: 130 IGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDD 189
IGRKVDL A+ Y L+ A++ +F EY L YED
Sbjct: 174 IGRKVDLNAHRSYKTLALALELMF----TKPSIGLCASHNTNSLKLLDNSAEYQLTYEDR 229
Query: 190 EGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
+GD MLVGDVPW+MF+++ KRLR++++SD
Sbjct: 230 DGDWMLVGDVPWEMFVSSVKRLRIMRTSD 258
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVR++RRN GD+ K G++VK++MDG P RK
Sbjct: 92 WPPVRAYRRN-------TFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRK 144
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGDR 193
VDL GY +L A+D LF ++ + YED +GD
Sbjct: 145 VDLKMCKGYRELREALDLLF------------TKCFSATASDGCSDGQFAIAYEDKDGDL 192
Query: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVPW+MFI++ K+LR++K S+
Sbjct: 193 MLVGDVPWEMFISSCKKLRIMKGSE 217
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVRS+R++ K +D G+FVK++MDG P RK
Sbjct: 57 WPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQK--EDVAGAGGLFVKVSMDGAPYLRK 114
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGDR 193
+DL Y GY +L A++ +F ++ + YED +GD
Sbjct: 115 IDLKVYKGYRELREALEAMF-----------LCFSGGAAADAAVNPSDFAVTYEDKDGDL 163
Query: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVP++MFI+T KRLR++K S+
Sbjct: 164 MLVGDVPFEMFISTCKRLRIMKGSE 188
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 32/149 (21%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASK-DGGAEKG---MFVKINMDGVP 129
WPP+RS+R+N N K++K D A++G ++VK++MDG P
Sbjct: 127 WPPIRSYRKN-----------------TMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAP 169
Query: 130 IGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDD 189
RKVDL Y Y +S ++K+F EY L YED
Sbjct: 170 YLRKVDLKTYKNYKDMSLGLEKMF-----------IGFSTGKEGAENQKDGEYVLTYEDK 218
Query: 190 EGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
+GD MLVGDVPW+MF + +RLR++K SD
Sbjct: 219 DGDWMLVGDVPWEMFTDSCRRLRIMKGSD 247
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 66/146 (45%), Gaps = 37/146 (25%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVRSFR+N A FVK+ +DG P RK
Sbjct: 80 WPPVRSFRKN-------------------------------ALAAKFVKVAVDGAPYLRK 108
Query: 134 VDLAAYGGYAQLSAAV-DKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGD 192
VDL AY GY QL A+ DK F EY YED +GD
Sbjct: 109 VDLEAYSGYDQLLRALQDKFF-----SHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGD 163
Query: 193 RMLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVPW+MF+ T +RLR++KSS+
Sbjct: 164 WMLVGDVPWKMFVETCQRLRLMKSSE 189
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVRSFR+N+ + VK++MDG P RK
Sbjct: 104 WPPVRSFRKNVLAEK--------------------------CKAAALVKVSMDGAPYLRK 137
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGDR 193
+D+A Y Y +LS A +F EY YED +GD
Sbjct: 138 IDVAMYKSYPELSMAFQNMF---TSFTIGKCGSHQQLKESNKLRDDLEYVPTYEDKDGDW 194
Query: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVPW+MF+ + KRLR++K S+
Sbjct: 195 MLVGDVPWEMFVESCKRLRIMKGSE 219
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 69/146 (47%), Gaps = 28/146 (19%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVR+FR+N A + K FVK+ +DG P RK
Sbjct: 85 WPPVRAFRKNAL----------------------AALAAASSSKAKFVKVAVDGAPYLRK 122
Query: 134 VDLAAYGGYAQLSAAV-DKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGD 192
VDL AY GY QL AA+ DK F EY YED +GD
Sbjct: 123 VDLEAYRGYDQLLAALQDKFF-----SHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGD 177
Query: 193 RMLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVPW+MF+ T +RLR++KSS+
Sbjct: 178 WMLVGDVPWKMFVETCQRLRLMKSSE 203
>Os06g0355300
Length = 149
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEK----GMFVKINMDGVP 129
WPPVR+FR+NL G S+D E+ MFVK+N++G
Sbjct: 16 WPPVRTFRKNLSTPKPADADDLMNKMKPCSDEG-HGSRDAAQERRPSSTMFVKVNLEGYA 74
Query: 130 IGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDD 189
+GRK+DL A+ Y LS A+ +F Y LVYED+
Sbjct: 75 VGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKK---RYVLVYEDN 131
Query: 190 EGDRMLVGDVPWQ 202
EGDRMLVGDVPW+
Sbjct: 132 EGDRMLVGDVPWE 144
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPV S+RR+ + + +K GG ++VK++MDG P RK
Sbjct: 70 WPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGG----LYVKVSMDGAPYLRK 125
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGDR 193
VDL YGGY +L A+D LF + + YED +GD
Sbjct: 126 VDLRMYGGYRELRDALDALF---------------GCFSADASASAAHFAVAYEDKDGDL 170
Query: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
ML GDVPW MFI++ K+LR+++ S+
Sbjct: 171 MLAGDVPWDMFISSCKKLRIMRGSE 195
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 27/145 (18%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
WPPVR++RRN A ++ A + VK+ +DG P RK
Sbjct: 65 WPPVRAYRRN-------------------------ALREDSA-RAKLVKVAVDGAPYLRK 98
Query: 134 VDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYTLVYEDDEGDR 193
VDLAA+ GYA L A+ +F EY YED +GD
Sbjct: 99 VDLAAHAGYAPLLRALHGMF-ASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDW 157
Query: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
MLVGDVPW+MF+ + KR+R++KSS+
Sbjct: 158 MLVGDVPWKMFVESCKRIRLMKSSE 182
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
Query: 105 NGDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXX 164
NG + FVK++MDG P RKVD+AAYG Y +L A++ +F
Sbjct: 32 NGHPPPSSSMIQAAYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGLMDGY 91
Query: 165 XXXXXXXXXXXXXXXXEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
E+ +VYED +GD MLVGDVPW+MF+++ KR+RV+++ +
Sbjct: 92 GEW-------------EHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACE 132
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 119 MFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXX 178
+FVK+ M+GVPIGRK+DL GY L A + +FR
Sbjct: 104 LFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKV-- 161
Query: 179 XXEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
+ L YED EGD M+ GDVPW++F+ + KRLR+ ++ D
Sbjct: 162 --HHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 68/155 (43%), Gaps = 24/155 (15%)
Query: 74 WPPVRSFRRNLXXXXXXXXXXXXXXXXXXXXNGDKASKDGGAEK----------GMFVKI 123
WPPVRS+R++ + +K+ G VK+
Sbjct: 74 WPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSLVKV 133
Query: 124 NMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRXXXXXXXXXXXXXXXXXXXXXXXXXXEYT 183
+MDG P RK+DL Y GY +L A++ +F E+
Sbjct: 134 SMDGAPYLRKIDLRMYKGYRELREALEAMF--------------VCFSGAADGANPSEFA 179
Query: 184 LVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
+ Y+D +GD MLVGDVP+ MF +T K+LR++K S+
Sbjct: 180 ITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSE 214
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,100,862
Number of extensions: 135824
Number of successful extensions: 469
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 444
Number of HSP's successfully gapped: 23
Length of query: 238
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 140
Effective length of database: 11,918,829
Effective search space: 1668636060
Effective search space used: 1668636060
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 154 (63.9 bits)