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Os06g0355300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.9 (0.0254) R2 : 0.812
β1 : 1.69 (0.0939) R2dD : 0.143 R2D : 0.104
β2 : 2.04 (0.0618) R2dC : 0.477 R2C : 0.59
β3 : -1.53 (0.0947) R2dE : 0.117 R2E : 0.185
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.264 (0.0543) R2dN8 : 0.0132 R2N8 : -0.00566
σ : 0.474
deviance : 103.67
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C
peak time of C : 0.349
E
wheather : temperature
threshold : 25.73
memory length : 269
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.34 0.471 11.9 1.8 2.02 -1.67 -0.779 1.16 0.296 0.306 25.7 258 -- --
100.75 0.467 11.9 1.67 2.04 -1.55 -0.76 -- 0.273 0.334 25.69 264 -- --
102.85 0.472 11.8 1.89 2.01 -1.72 -- 1.77 0.311 0.331 25.8 252 -- --
103.67 0.474 11.9 1.69 2.04 -1.53 -- -- 0.264 0.349 25.73 269 -- --
254.06 0.746 11.7 2.52 -- -3.35 -- 4.27 0.725 -- 24.1 4 -- --
142.12 0.559 11.9 1.43 2.36 -- -0.586 -- 0.189 1.34 -- -- -- --
143.52 0.561 11.9 1.45 2.36 -- -- -- 0.192 1.36 -- -- -- --
263.67 0.76 11.8 2 -- -3.04 -- -- 0.592 -- 23.83 7 -- --
175.96 0.618 11.9 -- 2.14 -1.17 -- -- 0.0417 0.692 26.49 260 -- --
487.79 1.03 11.8 1.55 -- -- -- -- 0.242 -- -- -- -- --
199.2 0.66 11.9 -- 2.39 -- -- -- 0.0305 1.38 -- -- -- --
364 0.891 11.8 -- -- -2.72 -- -- 0.287 -- 24.45 12 -- --
550.87 1.1 11.9 -- -- -- -- -- 0.0704 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 89.38 temperature 15 270 > th dose dependent rect. 3 14
25 94.94 temperature 15 270 > th dose dependent sin 0 NA
36 96.07 temperature 30 270 < th dose independent rect. 7 14
50 96.69 temperature 25 270 > th dose dependent rect. 19 22
58 96.98 temperature 30 270 < th dose dependent rect. 7 14
72 97.31 temperature 10 720 > th dose dependent rect. 21 18
104 98.19 temperature 30 270 < th dose independent rect. 15 21
140 98.82 temperature 10 270 > th dose dependent rect. 10 23
230 100.27 temperature 15 720 > th dose dependent sin 4 NA
232 100.28 radiation 40 4320 < th dose dependent rect. 3 3
236 100.33 radiation 40 4320 < th dose dependent rect. 19 11
240 100.37 temperature 25 270 > th dose dependent rect. 2 20
241 100.38 temperature 25 90 > th dose dependent rect. 11 23
246 100.42 radiation 40 4320 < th dose dependent rect. 1 5
255 100.48 temperature 25 4320 > th dose dependent rect. 8 1
296 100.69 temperature 30 270 < th dose independent rect. 13 23
298 100.70 temperature 25 4320 > th dose dependent rect. 7 3
299 100.70 radiation 20 4320 > th dose dependent rect. 15 17
301 100.71 radiation 20 4320 < th dose independent rect. 15 18
322 100.83 radiation 10 4320 < th dose dependent rect. 17 14
338 100.92 radiation 40 4320 < th dose dependent rect. 15 18
356 101.00 temperature 25 270 > th dose dependent no NA NA
364 101.01 temperature 25 270 > th dose dependent rect. 5 23
368 101.03 temperature 30 270 < th dose dependent sin 23 NA
373 101.03 temperature 25 90 > th dose dependent rect. 12 21
397 101.10 temperature 25 10 > th dose dependent rect. 12 22
424 101.26 radiation 40 4320 < th dose dependent rect. 16 16
426 101.27 radiation 10 14400 > th dose independent rect. 17 1
481 101.46 radiation 1 4320 > th dose dependent rect. 18 12
486 101.51 radiation 40 4320 < th dose independent rect. 14 20
517 101.66 radiation 10 14400 > th dose dependent rect. 17 1
518 101.66 radiation 1 4320 > th dose dependent rect. 4 2
542 101.70 radiation 40 4320 < th dose independent sin 12 NA
569 101.80 temperature 30 14400 > th dose independent rect. 15 19
578 101.86 temperature 30 14400 < th dose independent rect. 15 19
626 102.13 radiation 1 4320 > th dose dependent sin 12 NA
627 102.13 radiation 40 4320 < th dose dependent sin 12 NA
654 102.33 radiation 20 4320 > th dose independent rect. 15 18
665 102.40 radiation 30 4320 > th dose dependent rect. 15 1
699 102.51 temperature 30 14400 > th dose independent rect. 15 3
700 102.51 temperature 30 14400 < th dose independent rect. 15 3
718 102.56 temperature 30 4320 < th dose independent rect. 4 10
723 102.56 radiation 30 4320 > th dose dependent sin 12 NA
730 102.58 temperature 30 4320 < th dose independent rect. 6 8
735 102.59 temperature 30 4320 < th dose independent rect. 8 6
748 102.61 temperature 30 14400 > th dose independent sin 11 NA
760 102.66 radiation 30 1440 > th dose independent rect. 15 1
796 102.68 temperature 30 14400 < th dose independent sin 11 NA
797 102.68 temperature 30 14400 < th dose independent rect. 15 7
802 102.68 temperature 30 14400 < th dose independent rect. 15 13
806 102.69 temperature 30 14400 < th dose independent rect. 15 5
844 102.84 radiation 40 4320 > th dose dependent rect. 12 22
866 102.93 temperature 30 4320 > th dose independent rect. 8 6
891 102.97 radiation 30 4320 < th dose independent rect. 15 1
896 102.98 temperature 30 4320 < th dose independent sin 7 NA
915 103.07 radiation 10 14400 < th dose independent rect. 17 1
918 103.07 radiation 30 4320 < th dose independent rect. 15 14
936 103.10 radiation 30 4320 < th dose independent rect. 15 8
946 103.13 radiation 30 4320 < th dose independent rect. 15 11
951 103.15 radiation 30 4320 < th dose independent rect. 15 5
975 103.18 temperature 30 14400 > th dose dependent rect. 17 17
985 103.21 temperature 30 4320 > th dose independent rect. 13 1