BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0355300 Os06g0355300|Os06g0355300
(149 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0355300 313 4e-86
Os08g0109400 AUX/IAA protein family protein 282 8e-77
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 106 7e-24
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 97 4e-21
Os05g0523300 Similar to IAA8 (Fragment) 95 2e-20
Os03g0742900 Aux /IAA protein 93 6e-20
Os02g0817600 AUX/IAA protein family protein 91 2e-19
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 91 3e-19
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 89 1e-18
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 88 3e-18
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 85 2e-17
Os05g0559400 Similar to IAA11 (Fragment) 84 3e-17
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 82 1e-16
Os06g0335500 AUX/IAA protein family protein 82 1e-16
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 77 3e-15
Os07g0182400 AUX/IAA protein family protein 74 5e-14
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 73 7e-14
Os03g0633800 Similar to IAA6 (Fragment) 69 1e-12
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 67 6e-12
Os02g0723400 AUX/IAA protein family protein 66 9e-12
Os11g0221000 Aux/IAA_ARF_dimerisation domain containing pro... 64 5e-11
>Os06g0355300
Length = 149
Score = 313 bits (801), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%)
Query: 1 MFRENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRP 60
MFRENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRP
Sbjct: 1 MFRENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRP 60
Query: 61 SSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGS 120
SSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGS
Sbjct: 61 SSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGS 120
Query: 121 KKRYVLVYEDNEGDRMLVGDVPWEYVCLL 149
KKRYVLVYEDNEGDRMLVGDVPWEYVCLL
Sbjct: 121 KKRYVLVYEDNEGDRMLVGDVPWEYVCLL 149
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 282 bits (721), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/142 (95%), Positives = 138/142 (97%)
Query: 3 RENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSS 62
RENRAASSAQLVGWPPVR FRKNLSTPKPADADDLMNK+K CSDEGHGSR AAQERR SS
Sbjct: 83 RENRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSS 142
Query: 63 TMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKK 122
TMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQ+MEEGSKK
Sbjct: 143 TMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQMEEGSKK 202
Query: 123 RYVLVYEDNEGDRMLVGDVPWE 144
RYVLVYEDNEGDRMLVGDVPWE
Sbjct: 203 RYVLVYEDNEGDRMLVGDVPWE 224
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 106 bits (264), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 89/147 (60%), Gaps = 20/147 (13%)
Query: 8 ASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVK 67
++A +VGWPP+R+FR+NL A + + +P +D + ++ P VK
Sbjct: 171 GAAAPVVGWPPIRSFRRNL-----ASSSSSKHSPEPQNDNANAKVTLTCKKNP----LVK 221
Query: 68 VNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-------SDGIATR---DNELQRME 117
+N++G +GRKIDL A+ SYD LS A++ +FHGFL + IA + D ++
Sbjct: 222 INMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLL 281
Query: 118 EGSKKRYVLVYEDNEGDRMLVGDVPWE 144
+GS + Y LVYED+EGDRMLVGDVPW+
Sbjct: 282 DGSGE-YTLVYEDSEGDRMLVGDVPWK 307
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 97.1 bits (240), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 81/144 (56%), Gaps = 23/144 (15%)
Query: 10 SAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVN 69
S +VGWPPVRTFR+NL+T A + L N K AA+ F+K+N
Sbjct: 136 STPVVGWPPVRTFRRNLATSSKASLE-LQNGKK-----------AAKAEEIKRAPFIKIN 183
Query: 70 LEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLS---DGIATRDNELQR-------MEEG 119
++G +GRKIDL A SY+ LS A+ +F G L+ D + + Q+ + +G
Sbjct: 184 MDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDG 243
Query: 120 SKKRYVLVYEDNEGDRMLVGDVPW 143
+ + Y LVYED EGD++LVGDVPW
Sbjct: 244 TGE-YTLVYEDYEGDKVLVGDVPW 266
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 94.7 bits (234), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 24/144 (16%)
Query: 13 LVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEG 72
+VGWPP+R+FR+NL+ + + +DE ++RP VK+N++G
Sbjct: 168 VVGWPPIRSFRRNLT-----NGSSFKQSPERQNDEADDKAKPICKKRP----LVKINMDG 218
Query: 73 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRD-NELQRMEEGSKKR-------- 123
+GRK+DL+ + SY LS A++ +F GFL A +D + + E+G++ +
Sbjct: 219 IPIGRKVDLQIYDSYQKLSSAVEELFRGFLE---AQKDLSCAESGEQGAEDKIFSGLLDG 275
Query: 124 ---YVLVYEDNEGDRMLVGDVPWE 144
Y LVYEDN+GDRML GD+PW+
Sbjct: 276 TGVYTLVYEDNDGDRMLAGDIPWK 299
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 14/134 (10%)
Query: 11 AQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNL 70
AQ VGWPPVR+FR+N+ T + +K + +D+ + AA +S+ FVKV++
Sbjct: 85 AQAVGWPPVRSFRRNIMT-----VQSVKSKKEEEADKQQ-QQPAANASGSNSSAFVKVSM 138
Query: 71 EGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYED 130
+G RK+DLK + SY LS ALQ MF F + G M E + V YED
Sbjct: 139 DGAPYLRKVDLKMYNSYKDLSLALQKMFGTFTATG--------NNMNEVNGSDAVTTYED 190
Query: 131 NEGDRMLVGDVPWE 144
+GD MLVGDVPW+
Sbjct: 191 KDGDWMLVGDVPWQ 204
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Query: 13 LVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQ-ERRPSSTMFVKVNLE 71
+VGWPP+R FR N + + + K ++E +D + E++ +VKVN++
Sbjct: 111 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMD 170
Query: 72 GYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDN 131
G +GRK+DL AHRSY +L+ AL+ MF A+ + ++ + S + Y L YED
Sbjct: 171 GEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSAE-YQLTYEDR 229
Query: 132 EGDRMLVGDVPWE 144
+GD MLVGDVPWE
Sbjct: 230 DGDWMLVGDVPWE 242
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 90.9 bits (224), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 16 WPPVRTFRKNLSTPKPADADDLMNKMKPCSDEG-HGSRDAAQERRPSSTMFVKVNLEGYA 74
WPPVR+FR+NL++ + + G S+D E+ MFVK+N++G
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEK----GMFVKINMDGVP 129
Query: 75 VGRKIDLKAHRSYDSLSQALQSMFHGFLS-----DGIATRDNELQRMEEGSKKRYVLVYE 129
+GRK+DL A+ Y LS A+ +F G L+ M G + Y LVYE
Sbjct: 130 IGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGE--YTLVYE 187
Query: 130 DNEGDRMLVGDVPWE 144
D+EGDRMLVGDVPW+
Sbjct: 188 DDEGDRMLVGDVPWQ 202
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 24/145 (16%)
Query: 12 QLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLE 71
Q+VGWPPVR +RKN + + +G G E P ++VKV+++
Sbjct: 117 QVVGWPPVRNYRKN--------------TLAASASKGKGEDKGTAEGGP---LYVKVSMD 159
Query: 72 GYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATR-DNELQRMEEGSK------KRY 124
G RK+DLK + SY+ LS AL+ MF F++ R + R+ GSK + Y
Sbjct: 160 GAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEY 219
Query: 125 VLVYEDNEGDRMLVGDVPWEYVCLL 149
VL YED + D MLVGD+PW+ +
Sbjct: 220 VLTYEDKDADWMLVGDLPWDLFTTI 244
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 83/150 (55%), Gaps = 25/150 (16%)
Query: 4 ENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSST 63
E A AQ+VGWPPVR++RKN+ + +D+G + D ++ +
Sbjct: 112 EKPRAPKAQVVGWPPVRSYRKNILAVQ--------------ADKGKDAADGGGDKSGAGA 157
Query: 64 M---FVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGI-ATRDNELQ 114
FVKV+++G RK+DLK ++SY LS+AL+ MF F S G+ ++++
Sbjct: 158 AAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIA 217
Query: 115 RMEEGSKKRYVLVYEDNEGDRMLVGDVPWE 144
+ GS+ YV YED +GD MLVGDVPWE
Sbjct: 218 DLLNGSE--YVPTYEDKDGDWMLVGDVPWE 245
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 71/141 (50%), Gaps = 37/141 (26%)
Query: 8 ASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVK 67
A AQ+VGWPPVR+FRKN+ L K K + VK
Sbjct: 96 APKAQVVGWPPVRSFRKNV----------LAEKCK-------------------AAALVK 126
Query: 68 VNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKR---- 123
V+++G RKID+ ++SY LS A Q+MF F + Q+++E +K R
Sbjct: 127 VSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGKCGSH----QQLKESNKLRDDLE 182
Query: 124 YVLVYEDNEGDRMLVGDVPWE 144
YV YED +GD MLVGDVPWE
Sbjct: 183 YVPTYEDKDGDWMLVGDVPWE 203
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 24/140 (17%)
Query: 12 QLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLE 71
Q+VGWPPVR++RKN L E G + +VKV+++
Sbjct: 127 QVVGWPPVRSYRKNT----------LAASATKTKGEDQGKSEVG-------CCYVKVSMD 169
Query: 72 GYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIAT-RDNELQRMEEGSK------KRY 124
G RK+DLK + SY+ LS AL+ MF F++ ++ + ++ R+ +GS+ + Y
Sbjct: 170 GAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEY 229
Query: 125 VLVYEDNEGDRMLVGDVPWE 144
VL YED + D MLVGD+PW+
Sbjct: 230 VLTYEDKDADWMLVGDLPWD 249
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 24/132 (18%)
Query: 13 LVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEG 72
+VGWPP+R++RKN +++ +++ ++ ++VKV+++G
Sbjct: 124 VVGWPPIRSYRKNTM----------------ATNQIKSNKEDVDAKQGQGFLYVKVSMDG 167
Query: 73 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDNE 132
RK+DLK +++Y +S L+ MF GF S G +N+ ++G YVL YED +
Sbjct: 168 APYLRKVDLKTYKNYKDMSLGLEKMFIGF-STGKEGAENQ----KDGE---YVLTYEDKD 219
Query: 133 GDRMLVGDVPWE 144
GD MLVGDVPWE
Sbjct: 220 GDWMLVGDVPWE 231
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 13 LVGWPPVRTFRKN---LSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVN 69
+VGWPP+R++RKN +S P DD K P S ++VKV+
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPAS----------------GCLYVKVS 152
Query: 70 LEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGIATRD--NELQRMEEGSKK 122
++G RK+DLK +++Y LS AL+ MF F S+G + RD ++ + M+ +
Sbjct: 153 MDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGT 212
Query: 123 RYVLVYEDNEGDRMLVGDVPW 143
VL YED + D MLVGDVPW
Sbjct: 213 ELVLTYEDKDEDWMLVGDVPW 233
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 77.4 bits (189), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 67/142 (47%), Gaps = 28/142 (19%)
Query: 4 ENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSST 63
E+ + A++VGWPPVR FRKN A S
Sbjct: 73 ESPPSPKARVVGWPPVRAFRKNALA-------------------------ALAAASSSKA 107
Query: 64 MFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEG-SKK 122
FVKV ++G RK+DL+A+R YD L ALQ F + I NE ++ + S
Sbjct: 108 KFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFT--IRKLGNEEMKLVDAVSGN 165
Query: 123 RYVLVYEDNEGDRMLVGDVPWE 144
YV YED +GD MLVGDVPW+
Sbjct: 166 EYVPTYEDKDGDWMLVGDVPWK 187
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 73.6 bits (179), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 4 ENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSST 63
+ A + AQ+VGWPPVR +R+N + G + ++++
Sbjct: 80 DTAAPAKAQVVGWPPVRAYRRNT----------FHQAAAAAAATKKGGDEKQKQQQQGGG 129
Query: 64 MFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKR 123
++VKV+++G RK+DLK + Y L +AL +F S AT + S +
Sbjct: 130 LYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFTKCFS---ATASDGC------SDGQ 180
Query: 124 YVLVYEDNEGDRMLVGDVPWE 144
+ + YED +GD MLVGDVPWE
Sbjct: 181 FAIAYEDKDGDLMLVGDVPWE 201
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 13/133 (9%)
Query: 12 QLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLE 71
Q+VGWPPVR++RK+ + E D A + +FVKV+++
Sbjct: 53 QVVGWPPVRSYRKS-CLQPTTTTTKSKPPPAAAAAETQQKEDVAG----AGGLFVKVSMD 107
Query: 72 GYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDN 131
G RKIDLK ++ Y L +AL++MF F G A D + + + + YED
Sbjct: 108 GAPYLRKIDLKVYKGYRELREALEAMFLCF--SGGAAADAAVNPSD------FAVTYEDK 159
Query: 132 EGDRMLVGDVPWE 144
+GD MLVGDVP+E
Sbjct: 160 DGDLMLVGDVPFE 172
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 18/143 (12%)
Query: 9 SSAQLVGWPPVRTFRKNL-------STPKPADADDLMNKMKPCSDEGHGSRDAAQERRPS 61
+ AQ+VGWPPVR++RK+ ++ A NK +P + + A+ +
Sbjct: 67 AKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAAN 126
Query: 62 STMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSK 121
VKV+++G RKIDL+ ++ Y L +AL++MF F G A N +
Sbjct: 127 GGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF--SGAADGANPSE------- 177
Query: 122 KRYVLVYEDNEGDRMLVGDVPWE 144
+ + Y+D +GD MLVGDVP++
Sbjct: 178 --FAITYQDKDGDLMLVGDVPFD 198
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 56/132 (42%), Gaps = 38/132 (28%)
Query: 13 LVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEG 72
+VGWPPV + R R +VKV EG
Sbjct: 76 VVGWPPVSSAR----------------------------------RACGGANYVKVKKEG 101
Query: 73 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKKRYVLVYEDNE 132
A+GRK+DL H SYD L+ L MF G + ++ + G V+ YED +
Sbjct: 102 DAIGRKVDLALHSSYDELAATLARMFPTNDHQG----EKKMANDDHGDAAGPVVTYEDGD 157
Query: 133 GDRMLVGDVPWE 144
GD MLVGDVPW+
Sbjct: 158 GDWMLVGDVPWD 169
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Query: 63 TMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQRMEEGSKK 122
++FVKV +EG +GRK+DL Y L L SMF ++ R + M+ +K
Sbjct: 103 SLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKT-NKV 161
Query: 123 RYVLVYEDNEGDRMLVGDVPWE 144
+VL YED EGD M+ GDVPWE
Sbjct: 162 HHVLTYEDQEGDWMMAGDVPWE 183
>Os11g0221000 Aux/IAA_ARF_dimerisation domain containing protein
Length = 288
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 51/104 (49%), Gaps = 15/104 (14%)
Query: 14 VGWPPVRTFRKNL-STPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSS---------- 62
VGWPPV T R+NL +T D +KP + AA E
Sbjct: 169 VGWPPVHTSRRNLVATINNVLKPDTTAAVKPDRPTQATAMFAADETTAPPPRSAAAATEA 228
Query: 63 ----TMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL 102
MF KV+++GY VGRKI+L+AHR+YDSL + L M H F
Sbjct: 229 SRTLNMFAKVHMDGYKVGRKINLRAHRNYDSLRRVLTKMTHNFF 272
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,217,219
Number of extensions: 201355
Number of successful extensions: 801
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 780
Number of HSP's successfully gapped: 25
Length of query: 149
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 57
Effective length of database: 12,232,113
Effective search space: 697230441
Effective search space used: 697230441
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 151 (62.8 bits)