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Os02g0805100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Auxin-responsive protein IAA12 (Indoleacetic acid-induced protein 12) (BODENLOS protein).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.05 (0.0565) R2 : 0.637
β1 : 2.31 (0.206) R2dD : 0.102 R2D : -0.00693
β2 : 0.957 (0.159) R2dC : 0.038 R2C : 0.0741
β3 : 2.22 (0.137) R2dE : 0.266 R2E : 0.293
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.89 (0.12) R2dN8 : 0.268 R2N8 : 0.134
σ : 1.05
deviance : 512.14
__
_____
C
peak time of C : 21.1
E
wheather : radiation
threshold : 18.02
memory length : 156
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
491.96 1.04 6.06 2.27 1.29 2.18 -1.87 3.05 1.9 21.3 23.8 200 -- --
504.16 1.05 6.06 2.31 0.695 2.71 -2.77 -- 1.93 17.5 14.82 141 -- --
499.65 1.04 6.05 2.29 1.06 2.27 -- 1.89 1.9 20.9 20.32 178 -- --
512.14 1.05 6.05 2.31 0.957 2.22 -- -- 1.89 21.1 18.02 156 -- --
527.24 1.07 6.02 2.29 -- 2.52 -- 1.08 1.93 -- 15.38 101 -- --
570.58 1.12 6.1 2.23 2.82 -- 1.41 -- 1.79 0.182 -- -- -- --
579.09 1.13 6.1 2.17 2.82 -- -- -- 1.78 0.109 -- -- -- --
531.79 1.07 6.01 2.24 -- 2.51 -- -- 1.94 -- 14.77 85 -- --
650.33 1.19 6.12 -- 0.992 2.03 -- -- 1.64 21.7 14.3 156 -- --
1078.75 1.53 6.04 2.26 -- -- -- -- 1.82 -- -- -- -- --
703.6 1.24 6.16 -- 2.85 -- -- -- 1.54 0.151 -- -- -- --
658.95 1.2 6.07 -- -- 2.45 -- -- 1.7 -- 11.56 67 -- --
1213.87 1.63 6.1 -- -- -- -- -- 1.57 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 493.32 humidity 80 720 > th dose independent rect. 8 14
2 493.83 radiation 20 270 < th dose dependent rect. 9 23
4 494.12 radiation 10 270 > th dose independent rect. 6 10
18 494.79 humidity 60 720 > th dose dependent rect. 9 12
20 494.93 humidity 70 720 > th dose dependent rect. 10 18
21 495.01 humidity 50 720 > th dose dependent rect. 8 14
47 496.15 radiation 20 270 < th dose dependent rect. 21 23
48 496.19 humidity 60 720 > th dose dependent rect. 13 15
49 496.45 radiation 10 720 < th dose dependent sin 14 NA
59 496.70 radiation 20 90 < th dose dependent rect. 17 22
61 496.76 radiation 20 270 < th dose dependent rect. 15 23
65 497.13 radiation 20 270 < th dose dependent rect. 13 23
82 497.90 radiation 10 720 < th dose dependent rect. 13 18
84 497.93 radiation 20 270 < th dose dependent no NA NA
92 498.02 humidity 80 720 > th dose independent rect. 8 20
93 498.03 radiation 10 270 > th dose independent no NA NA
172 498.08 radiation 10 270 > th dose independent sin 0 NA
182 498.47 humidity 80 720 > th dose independent rect. 11 17
196 498.86 radiation 10 720 < th dose dependent rect. 9 11
208 499.25 radiation 10 720 < th dose dependent rect. 13 7
210 499.27 radiation 10 270 < th dose independent rect. 9 23
211 499.27 humidity 50 720 > th dose dependent rect. 17 11
219 499.55 humidity 60 720 > th dose dependent sin 16 NA
236 499.98 radiation 10 270 > th dose independent rect. 9 23
238 499.99 humidity 80 720 > th dose independent rect. 2 20
255 500.42 wind 1 14400 < th dose independent rect. 4 2
263 500.55 humidity 80 720 < th dose independent rect. 12 10
282 500.83 humidity 80 720 > th dose independent sin 21 NA
337 501.54 radiation 10 720 < th dose dependent rect. 9 19
343 501.63 radiation 20 270 < th dose dependent rect. 24 23
348 501.75 wind 1 14400 > th dose independent rect. 4 2
370 502.05 humidity 50 720 > th dose dependent rect. 17 5
387 502.39 humidity 90 1440 < th dose dependent rect. 19 21
393 502.47 humidity 90 720 < th dose dependent rect. 12 20
396 502.52 radiation 10 270 < th dose independent rect. 13 23
410 502.56 humidity 90 720 < th dose dependent sin 13 NA
417 502.61 radiation 10 720 < th dose dependent rect. 13 15
454 503.17 radiation 10 270 < th dose independent rect. 21 23
459 503.24 radiation 10 720 < th dose dependent rect. 7 21
464 503.33 humidity 90 1440 < th dose dependent rect. 9 21
466 503.34 radiation 10 720 < th dose dependent rect. 5 23
498 503.67 radiation 10 720 < th dose independent sin 14 NA
502 503.74 humidity 90 1440 < th dose dependent rect. 23 18
509 503.78 humidity 80 720 < th dose independent sin 20 NA
525 503.94 humidity 50 720 > th dose dependent rect. 2 19
527 503.96 radiation 30 270 < th dose dependent rect. 9 11
552 504.16 radiation 10 270 < th dose independent no NA NA
576 504.32 humidity 90 1440 < th dose dependent rect. 23 22
581 504.36 humidity 90 720 < th dose dependent rect. 12 16
600 504.50 wind 1 14400 > th dose independent rect. 2 4
605 504.53 humidity 80 1440 > th dose independent rect. 19 22
667 504.84 humidity 80 1440 < th dose independent rect. 8 14
687 504.97 humidity 90 720 < th dose dependent rect. 19 5
694 505.01 humidity 90 1440 < th dose dependent rect. 15 23
720 505.14 radiation 10 90 < th dose independent rect. 7 16
722 505.15 humidity 90 1440 < th dose dependent no NA NA
728 505.17 humidity 90 1440 < th dose dependent rect. 5 23
749 505.34 humidity 80 1440 < th dose independent rect. 19 22
763 505.41 radiation 10 720 < th dose dependent rect. 9 14
775 505.49 humidity 90 1440 < th dose dependent rect. 1 23
777 505.50 humidity 80 1440 < th dose independent rect. 6 16
874 505.90 radiation 10 270 > th dose independent rect. 12 23
921 506.14 humidity 90 1440 < th dose dependent rect. 9 7
930 506.19 radiation 10 720 < th dose independent rect. 14 7
935 506.23 humidity 80 1440 < th dose independent sin 0 NA
938 506.24 radiation 10 1440 < th dose independent rect. 15 1
939 506.24 humidity 80 1440 < th dose independent rect. 2 20
966 506.31 humidity 70 1440 > th dose dependent rect. 11 3
977 506.36 humidity 80 1440 < th dose independent rect. 8 8
994 506.42 humidity 90 1440 < th dose dependent rect. 11 3