Os03g0742900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aux /IAA protein.
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Os03g0742900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aux /IAA protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 101.01 | 0.472 | 13 | -0.377 | 2.79 | 2.12 | -0.344 | -4.27 | 0.116 | 16.5 | 22.95 | 1543 | -- | -- |
| 114.89 | 0.499 | 12.9 | 0.41 | 2.83 | 2.08 | -0.323 | -- | 0.183 | 16.5 | 18.42 | 7421 | -- | -- |
| 101.33 | 0.469 | 13 | -0.361 | 2.79 | 2.12 | -- | -4.19 | 0.117 | 16.5 | 22.9 | 1543 | -- | -- |
| 112.68 | 0.494 | 12.8 | 0.825 | 2.67 | 1.98 | -- | -- | 0.386 | 16.4 | 21.44 | 1652 | -- | -- |
| 202.64 | 0.663 | 12.9 | -0.334 | -- | 4.42 | -- | -6.23 | -0.0733 | -- | 22.68 | 221 | -- | -- |
| 227.86 | 0.708 | 12.7 | 1.57 | 2.78 | -- | -0.503 | -- | 0.861 | 16.5 | -- | -- | -- | -- |
| 228.53 | 0.708 | 12.7 | 1.56 | 2.77 | -- | -- | -- | 0.858 | 16.5 | -- | -- | -- | -- |
| 226.86 | 0.702 | 12.8 | 0.706 | -- | 3.91 | -- | -- | 0.236 | -- | 22.61 | 215 | -- | -- |
| 117.54 | 0.505 | 12.9 | -- | 2.8 | 2.72 | -- | -- | 0.0931 | 16.5 | 13.32 | 7510 | -- | -- |
| 638.92 | 1.18 | 12.7 | 1.46 | -- | -- | -- | -- | 0.785 | -- | -- | -- | -- | -- |
| 292.88 | 0.801 | 12.8 | -- | 2.74 | -- | -- | -- | 0.684 | 16.6 | -- | -- | -- | -- |
| 238.89 | 0.72 | 12.8 | -- | -- | 4.08 | -- | -- | 0.0886 | -- | 21.64 | 217 | -- | -- |
| 694.77 | 1.23 | 12.7 | -- | -- | -- | -- | -- | 0.624 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.75 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 19 |
| 3 | 95.72 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 17 |
| 23 | 104.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 25 | 104.42 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 33 | 105.43 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 42 | 105.99 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 65 | 106.80 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 9 |
| 84 | 107.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 20 |
| 95 | 107.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 15 |
| 134 | 107.55 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 170 | 107.83 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 181 | 107.88 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 222 | 108.12 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 18 |
| 278 | 108.37 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 322 | 108.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 352 | 108.68 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 376 | 108.79 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 390 | 108.87 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 403 | 108.92 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 532 | 109.55 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 568 | 109.76 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 607 | 110.07 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 632 | 110.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 644 | 110.35 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 661 | 110.47 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 700 | 110.77 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 769 | 111.20 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 6 |
| 791 | 111.43 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 828 | 111.65 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 839 | 111.71 | temperature | 10 | 270 | > th | dose dependent | sin | 2 | NA |
| 840 | 111.71 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 844 | 111.73 | temperature | 25 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 902 | 111.99 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 946 | 112.26 | temperature | 25 | 1440 | < th | dose independent | no | NA | NA |
| 968 | 112.38 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 970 | 112.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 23 |