Os01g0675700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin-responsive protein IAA14 (Indoleacetic acid-induced protein 14) (SOLITARY-ROOT protein).
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Os01g0675700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Auxin-responsive protein IAA14 (Indoleacetic acid-induced protein 14) (SOLITARY-ROOT protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.64 | 0.174 | 12.1 | -0.497 | 0.893 | -0.137 | -0.00203 | -1.51 | -0.197 | 12 | 24.9 | 3771 | -- | -- |
| 15.66 | 0.184 | 12.2 | -0.913 | 0.881 | -0.151 | -0.116 | -- | -0.335 | 12 | 24.7 | 12333 | -- | -- |
| 13.64 | 0.172 | 12.1 | -0.497 | 0.893 | -0.137 | -- | -1.51 | -0.197 | 12 | 24.9 | 3771 | -- | -- |
| 15.13 | 0.181 | 12.2 | -1.1 | 0.883 | -0.261 | -- | -- | -0.404 | 12 | 26.04 | 40583 | -- | -- |
| 53 | 0.341 | 12.2 | -0.859 | -- | -0.33 | -- | -0.232 | -0.409 | -- | 25.4 | 2353 | -- | -- |
| 16.43 | 0.19 | 12.2 | -0.823 | 0.87 | -- | -0.114 | -- | -0.266 | 12 | -- | -- | -- | -- |
| 16.49 | 0.19 | 12.2 | -0.827 | 0.87 | -- | -- | -- | -0.266 | 12 | -- | -- | -- | -- |
| 48.7 | 0.326 | 12.2 | -0.94 | -- | -0.386 | -- | -- | -0.392 | -- | 25.8 | 47520 | -- | -- |
| 22.2 | 0.219 | 12.1 | -- | 0.917 | 0.513 | -- | -- | -0.0799 | 12.2 | 18.4 | 44386 | -- | -- |
| 64.19 | 0.374 | 12.2 | -0.854 | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
| 34.53 | 0.275 | 12.1 | -- | 0.881 | -- | -- | -- | -0.174 | 12 | -- | -- | -- | -- |
| 68.65 | 0.386 | 12.1 | -- | -- | 0.647 | -- | -- | -0.0499 | -- | 17.3 | 47520 | -- | -- |
| 83.44 | 0.426 | 12.1 | -- | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 13.08 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 4 | 13.12 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 15 | 13.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 19 | 13.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 33 | 13.19 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 41 | 13.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 50 | 13.21 | temperature | 25 | 4320 | > th | dose independent | sin | 12 | NA |
| 71 | 13.25 | temperature | 25 | 4320 | < th | dose independent | sin | 11 | NA |
| 93 | 13.27 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 102 | 13.29 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 110 | 13.30 | temperature | 30 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 130 | 13.32 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 132 | 13.32 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 12 |
| 221 | 13.37 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 264 | 13.38 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 10 |
| 354 | 13.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 402 | 13.43 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 18 |
| 440 | 13.44 | temperature | 25 | 4320 | > th | dose dependent | sin | 11 | NA |
| 500 | 13.46 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 530 | 13.47 | temperature | 10 | 4320 | > th | dose dependent | sin | 11 | NA |
| 533 | 13.47 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 566 | 13.48 | temperature | 30 | 4320 | < th | dose dependent | sin | 11 | NA |