BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0675700 Os01g0675700|AK106121
(271 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 375 e-104
Os05g0559400 Similar to IAA11 (Fragment) 269 2e-72
Os06g0335500 AUX/IAA protein family protein 191 6e-49
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 177 6e-45
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 170 1e-42
Os03g0742900 Aux /IAA protein 151 6e-37
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 144 8e-35
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 132 2e-31
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 129 2e-30
Os07g0182400 AUX/IAA protein family protein 126 2e-29
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 125 3e-29
Os03g0633800 Similar to IAA6 (Fragment) 120 1e-27
Os06g0597000 Similar to Auxin responsive protein IAA-Re 119 2e-27
Os03g0797800 AUX/IAA protein family protein 117 1e-26
Os02g0817600 AUX/IAA protein family protein 116 2e-26
Os05g0523300 Similar to IAA8 (Fragment) 105 3e-23
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 103 2e-22
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 99 2e-21
Os09g0527700 Similar to Auxin-induced protein IAA4 94 9e-20
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 93 2e-19
Os08g0109400 AUX/IAA protein family protein 91 7e-19
Os06g0355300 87 1e-17
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 86 2e-17
Os02g0723400 AUX/IAA protein family protein 75 4e-14
Os06g0166500 Similar to Auxin-responsive protein IAA20 (Ind... 67 1e-11
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/271 (72%), Positives = 197/271 (72%)
Query: 1 MSPPLEPHDYIGLXXXXXXXXXXXXXXXXXXXXGGEAXXXXXXXXXXXXXSESPEREVVA 60
MSPPLEPHDYIGL GGEA SESPEREVVA
Sbjct: 1 MSPPLEPHDYIGLSAAAASPTPSSSSCSSSPNPGGEARGPRLTLRLGLPGSESPEREVVA 60
Query: 61 AXXXXXXXXXXXXKAASKRAFPDSSPRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVG 120
A KAASKRAFPDSSPRH VVG
Sbjct: 61 AGLTLGPLPPTTTKAASKRAFPDSSPRHGASSGSVAAAAACQDKAAPAAAPPAAKAQVVG 120
Query: 121 WPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSM 180
WPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSM
Sbjct: 121 WPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDLSM 180
Query: 181 ALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDL 240
ALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDL
Sbjct: 181 ALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPWDL 240
Query: 241 FTTICRKLKIMRGSDAAGIAPRSIEQSGQSR 271
FTTICRKLKIMRGSDAAGIAPRSIEQSGQSR
Sbjct: 241 FTTICRKLKIMRGSDAAGIAPRSIEQSGQSR 271
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 269 bits (687), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/154 (82%), Positives = 143/154 (92%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYED 177
VVGWPPVR+YRKNTLAASA+K KGED+G +E G YVKVSMDGAPYLRKVDLK YSSYED
Sbjct: 128 VVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYED 187
Query: 178 LSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLP 237
LS+ALEKMFSCFITG+S K+S RDRLT+GS+ADAL+DQEYVLTYEDKDADWMLVGDLP
Sbjct: 188 LSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLP 247
Query: 238 WDLFTTICRKLKIMRGSDAAGIAPRSIEQSGQSR 271
WDLFTT CRKL+IMRGSDAAG+APRS+EQ+GQ++
Sbjct: 248 WDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK 281
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 191 bits (484), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 93/154 (60%), Positives = 113/154 (73%), Gaps = 4/154 (2%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGP----LYVKVSMDGAPYLRKVDLKMYS 173
VVGWPP+R+YRKNT+A S KG+D G A+ P LYVKVSMDGAPYLRKVDLKMY
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYK 168
Query: 174 SYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLV 233
+Y++LS+ALEKMFSCF G S RD L++ D E VLTYEDKD DWMLV
Sbjct: 169 NYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLV 228
Query: 234 GDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 267
GD+PW +FT CR+L+IM+GSDA G+APR+ ++S
Sbjct: 229 GDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKS 262
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 177 bits (449), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/151 (58%), Positives = 109/151 (72%), Gaps = 16/151 (10%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEG-GPLYVKVSMDGAPYLRKVDLKMYSSYE 176
VVGWPP+R+YRKNT+A + K ED +G G LYVKVSMDGAPYLRKVDLK Y +Y+
Sbjct: 124 VVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYK 183
Query: 177 DLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDL 236
D+S+ LEKMF F TG+ G A+ +D EYVLTYEDKD DWMLVGD+
Sbjct: 184 DMSLGLEKMFIGFSTGKEG---------------AENQKDGEYVLTYEDKDGDWMLVGDV 228
Query: 237 PWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 267
PW++FT CR+L+IM+GSDA G+APR+ E+S
Sbjct: 229 PWEMFTDSCRRLRIMKGSDAIGLAPRAGEKS 259
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 106/155 (68%), Gaps = 9/155 (5%)
Query: 118 VVGWPPVRNYRKNTLAASASKGK------GEDKGTAEGGPLYVKVSMDGAPYLRKVDLKM 171
VVGWPPVR+YRKN LA A KGK G+ G +VKVSMDGAPYLRKVDLKM
Sbjct: 121 VVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKM 180
Query: 172 YSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWM 231
Y SY +LS ALEKMFS F G G S + + AD L EYV TYEDKD DWM
Sbjct: 181 YKSYLELSKALEKMFSSFTIGNCG---SHGVNGMNESKIADLLNGSEYVPTYEDKDGDWM 237
Query: 232 LVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQ 266
LVGD+PW++F C++L+IM+GS+A G+APR++E+
Sbjct: 238 LVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEK 272
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 98/156 (62%), Gaps = 26/156 (16%)
Query: 119 VGWPPVRNYRKNTLAASASKGKGEDKG-----------TAEGGPLYVKVSMDGAPYLRKV 167
VGWPPVR++R+N + + K K E++ + +VKVSMDGAPYLRKV
Sbjct: 88 VGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKV 147
Query: 168 DLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKD 227
DLKMY+SY+DLS+AL+KMF F + N NGS A V TYEDKD
Sbjct: 148 DLKMYNSYKDLSLALQKMFGTFTA-------TGNNMNEVNGSDA--------VTTYEDKD 192
Query: 228 ADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRS 263
DWMLVGD+PW +F C++L+IM+GS+A G+APR+
Sbjct: 193 GDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRA 228
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 92/145 (63%), Gaps = 25/145 (17%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYED 177
VVGWPPVR++RKN LA K A VKVSMDGAPYLRK+D+ MY SY +
Sbjct: 101 VVGWPPVRSFRKNVLAEKC-------KAAA-----LVKVSMDGAPYLRKIDVAMYKSYPE 148
Query: 178 LSMALEKMFSCFITGQSGLR---KSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVG 234
LSMA + MF+ F G+ G K SN+ R D EYV TYEDKD DWMLVG
Sbjct: 149 LSMAFQNMFTSFTIGKCGSHQQLKESNKLR----------DDLEYVPTYEDKDGDWMLVG 198
Query: 235 DLPWDLFTTICRKLKIMRGSDAAGI 259
D+PW++F C++L+IM+GS+A G+
Sbjct: 199 DVPWEMFVESCKRLRIMKGSEAIGL 223
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 94/149 (63%), Gaps = 27/149 (18%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYED 177
VVGWPPVR++RKN LAA +VKV++DGAPYLRKVDL+ YS Y+
Sbjct: 77 VVGWPPVRSFRKNALAAK-----------------FVKVAVDGAPYLRKVDLEAYSGYDQ 119
Query: 178 LSMALE-KMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDL 236
L AL+ K FS F +RK ++ +R DA+ EYV TYEDKD DWMLVGD+
Sbjct: 120 LLRALQDKFFSHFT-----IRKFADDER----KLVDAVNGTEYVPTYEDKDGDWMLVGDV 170
Query: 237 PWDLFTTICRKLKIMRGSDAAGIAPRSIE 265
PW +F C++L++M+ S+A +APR+ +
Sbjct: 171 PWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 29/155 (18%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKG------------EDKGTAEGGPLYVKVSMDGAPYLR 165
VVGWPPVR+YRK+ L + + K + + A G L+VKVSMDGAPYLR
Sbjct: 54 VVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLR 113
Query: 166 KVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKAD-ALQDQEYVLTYE 224
K+DLK+Y Y +L ALE MF CF + G+ AD A+ ++ +TYE
Sbjct: 114 KIDLKVYKGYRELREALEAMFLCF----------------SGGAAADAAVNPSDFAVTYE 157
Query: 225 DKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGI 259
DKD D MLVGD+P+++F + C++L+IM+GS+A G+
Sbjct: 158 DKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGL 192
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 88/147 (59%), Gaps = 25/147 (17%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGP-------LYVKVSMDGAPYLRKVDLK 170
VVGWPPVR YR+NT +A+ KG E LYVKVSMDGAPYLRKVDLK
Sbjct: 89 VVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLK 148
Query: 171 MYSSYEDLSMALEKMFS-CFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDAD 229
M Y +L AL+ +F+ CF + + +D D ++ + YEDKD D
Sbjct: 149 MCKGYRELREALDLLFTKCF-----------------SATASDGCSDGQFAIAYEDKDGD 191
Query: 230 WMLVGDLPWDLFTTICRKLKIMRGSDA 256
MLVGD+PW++F + C+KL+IM+GS+A
Sbjct: 192 LMLVGDVPWEMFISSCKKLRIMKGSEA 218
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 93/147 (63%), Gaps = 18/147 (12%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYED 177
VVGWPPVR +RKN LAA A+ + K +VKV++DGAPYLRKVDL+ Y Y+
Sbjct: 82 VVGWPPVRAFRKNALAALAAASSSKAK--------FVKVAVDGAPYLRKVDLEAYRGYDQ 133
Query: 178 LSMALE-KMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDL 236
L AL+ K FS F +RK N + DA+ EYV TYEDKD DWMLVGD+
Sbjct: 134 LLAALQDKFFSHFT-----IRKLGNEEM----KLVDAVSGNEYVPTYEDKDGDWMLVGDV 184
Query: 237 PWDLFTTICRKLKIMRGSDAAGIAPRS 263
PW +F C++L++M+ S+A +APRS
Sbjct: 185 PWKMFVETCQRLRLMKSSEAVNLAPRS 211
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 94/174 (54%), Gaps = 45/174 (25%)
Query: 118 VVGWPPVRNYRKNTL------------AASASKGKGE-------------DKGTAEGGPL 152
VVGWPPVR+YRK+ A S+ K E A GG L
Sbjct: 71 VVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGSL 130
Query: 153 YVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKAD 212
VKVSMDGAPYLRK+DL+MY Y +L ALE MF CF AD
Sbjct: 131 -VKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF------------------SGAAD 171
Query: 213 ALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGI-APRSIE 265
E+ +TY+DKD D MLVGD+P+D+FT+ C+KL+IM+ S+A G+ +PR ++
Sbjct: 172 GANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 17/144 (11%)
Query: 119 VGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYEDL 178
VGWPPVR YR+N L +++ K VKV++DGAPYLRKVDL ++ Y L
Sbjct: 63 VGWPPVRAYRRNALREDSARAK------------LVKVAVDGAPYLRKVDLAAHAGYAPL 110
Query: 179 SMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLPW 238
AL MF+ + + G +L D + EYV TYEDKD DWMLVGD+PW
Sbjct: 111 LRALHGMFASCLAVRGGGGGDGEGTKLV-----DLVTGAEYVPTYEDKDGDWMLVGDVPW 165
Query: 239 DLFTTICRKLKIMRGSDAAGIAPR 262
+F C+++++M+ S+A ++PR
Sbjct: 166 KMFVESCKRIRLMKSSEAVNLSPR 189
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 85/149 (57%), Gaps = 29/149 (19%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGE---------DKG-TAEGGPLYVKVSMDGAPYLRKV 167
VVGWPPV +YR++T +S+S D+G +GG LYVKVSMDGAPYLRKV
Sbjct: 67 VVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKV 126
Query: 168 DLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKD 227
DL+MY Y +L AL+ +F CF S + YEDKD
Sbjct: 127 DLRMYGGYRELRDALDALFGCFSADASASAAHFA-------------------VAYEDKD 167
Query: 228 ADWMLVGDLPWDLFTTICRKLKIMRGSDA 256
D ML GD+PWD+F + C+KL+IMRGS+A
Sbjct: 168 GDLMLAGDVPWDMFISSCKKLRIMRGSEA 196
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 32/166 (19%)
Query: 118 VVGWPPVRNYRKNTLAASAS---------------------KGKGEDKGTAEGGPLYVKV 156
VVGWPP+R +R N+L A K +GE KG G +VKV
Sbjct: 111 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAG---WVKV 167
Query: 157 SMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQD 216
+MDG RKVDL + SY+ L++ALE MF+ G +++ L N +
Sbjct: 168 NMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSLKLLDNSA------- 220
Query: 217 QEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPR 262
EY LTYED+D DWMLVGD+PW++F + ++L+IMR SDA G+ R
Sbjct: 221 -EYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 265
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGE---DKGTAEGGPL-----YVKVSMDGAPYLRKVDL 169
VVGWPP+R++R+N S+ K E D+ + P+ VK++MDG P RKVDL
Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
Query: 170 KMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQE--YVLTYEDKD 227
++Y SY+ LS A+E++F F+ Q L + + ++ L D Y L YED D
Sbjct: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDND 287
Query: 228 ADWMLVGDLPWDLFTTICRKLKIMRGSD 255
D ML GD+PW +F + ++L++MR S+
Sbjct: 288 GDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 84/153 (54%), Gaps = 23/153 (15%)
Query: 118 VVGWPPVRNYRKNTLAASAS-----KGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMY 172
VVGWPPVR +R+N +S + GK K ++K++MDG P RK+DL +
Sbjct: 139 VVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNAF 198
Query: 173 SSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQD----------QEYVLT 222
SYE LS+A++K+F + Q RD LT G+K +D EY L
Sbjct: 199 DSYEKLSLAVDKLFRGLLAAQ--------RDPLTAGAKDCQQEDVAISGLLDGTGEYTLV 250
Query: 223 YEDKDADWMLVGDLPWDLFTTICRKLKIMRGSD 255
YED + D +LVGD+PW +F + ++L++++ SD
Sbjct: 251 YEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 88/153 (57%), Gaps = 20/153 (13%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKG---------TAEGGPLYVKVSMDGAPYLRKVD 168
VVGWPP+R++R+N ++S+SK E + T + PL VK++MDG P RK+D
Sbjct: 176 VVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPL-VKINMDGIPIGRKID 234
Query: 169 LKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQ------EYVLT 222
L Y+SY+ LS A++++F F+ Q K ++ D + Q EY L
Sbjct: 235 LAAYNSYDGLSSAVKQLFHGFLQAQ----KDQTNAQIAQQGADDKIFYQLLDGSGEYTLV 290
Query: 223 YEDKDADWMLVGDLPWDLFTTICRKLKIMRGSD 255
YED + D MLVGD+PW +F + ++L+++R S+
Sbjct: 291 YEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 62/108 (57%), Gaps = 17/108 (15%)
Query: 153 YVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKAD 212
+VKVSMDG PYLRKVD+ Y Y +L AL MF C G D
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIGL-----------------MD 89
Query: 213 ALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIA 260
+ E+ + YED D DWMLVGD+PW++F + C+++++MR +A G++
Sbjct: 90 GYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 21/165 (12%)
Query: 121 WPPVRNYRKNTLAASASKGKGE-----------DKGTAEGGP---LYVKVSMDGAPYLRK 166
WPPVR++R+N ++S+S K DK + +GG ++VK++MDG P RK
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
Query: 167 VDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDK 226
VDL Y Y LS A++K+F + QS + + + EY L YED
Sbjct: 134 VDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEA----DAAAAGEMVGGGEYTLVYEDD 189
Query: 227 DADWMLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQSGQSR 271
+ D MLVGD+PW +F ++L++++ SD + P S+ ++ SR
Sbjct: 190 EGDRMLVGDVPWQMFIATAKRLRVLKSSD---LPPPSLMRAAGSR 231
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 79/151 (52%), Gaps = 26/151 (17%)
Query: 118 VVGWPPVRNYRKN--------------TLAASASKGKGEDKGTAE---GGPLYVKVSMDG 160
+VGWPPVR +RKN + + +G G E ++VKV+++G
Sbjct: 93 LVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEG 152
Query: 161 APYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNR-DRLTNGSKADALQDQEY 219
RK+DLK + SY+ LS AL+ MF F++ G+ N ++ GSK + Y
Sbjct: 153 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLS--DGIATRDNELQQMEEGSK------KRY 204
Query: 220 VLTYEDKDADWMLVGDLPWDLFTTICRKLKI 250
VL YED + D MLVGD+PW+LF ++L I
Sbjct: 205 VLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>Os06g0355300
Length = 149
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 24/144 (16%)
Query: 118 VVGWPPVRNYRKNT--------------LAASASKGKGEDKGTAEGGP---LYVKVSMDG 160
+VGWPPVR +RKN + + +G G E P ++VKV+++G
Sbjct: 13 LVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEG 72
Query: 161 APYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYV 220
RK+DLK + SY+ LS AL+ MF F++ R + R+ GSK + YV
Sbjct: 73 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATR-DNELQRMEEGSK------KRYV 125
Query: 221 LTYEDKDADWMLVGDLPWDLFTTI 244
L YED + D MLVGD+PW+ +
Sbjct: 126 LVYEDNEGDRMLVGDVPWEYVCLL 149
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 71/134 (52%), Gaps = 28/134 (20%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYED 177
VVGWPPV + R+ A GG YVKV +G RKVDL ++SSY++
Sbjct: 76 VVGWPPVSSARR-----------------ACGGANYVKVKKEGDAIGRKVDLALHSSYDE 118
Query: 178 LSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLP 237
L+ L +MF G +K +N D +G A V+TYED D DWMLVGD+P
Sbjct: 119 LAATLARMFP--TNDHQGEKKMANDD---HGDAAGP------VVTYEDGDGDWMLVGDVP 167
Query: 238 WDLFTTICRKLKIM 251
WD F ++LKI+
Sbjct: 168 WDDFARSVKRLKIL 181
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 152 LYVKVSMDGAPYLRKVDLKMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKA 211
L+VKV M+G P RK+DL Y+ L L MF IT +R G K
Sbjct: 104 LFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHH-----CHRQFAVVGMKT 158
Query: 212 DALQDQEYVLTYEDKDADWMLVGDLPWDLFTTICRKLKIMRGSD 255
+ + +VLTYED++ DWM+ GD+PW+LF T ++L+I R D
Sbjct: 159 NKVH---HVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>Os06g0166500 Similar to Auxin-responsive protein IAA20 (Indoleacetic
acid-induced protein 20)
Length = 183
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 30/134 (22%)
Query: 118 VVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYED 177
+VGWPPV+ + YVKV M+G RK+DL + SY +
Sbjct: 79 LVGWPPVKCLHRRRDGGCGGG--------------YVKVKMEGLAIGRKLDLSILGSYAE 124
Query: 178 LSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDLP 237
L L MF S+N++ D + Y +TYED + DWM VGD+P
Sbjct: 125 LLDTLHLMFP-----------STNQE-----DGHDRRRRHPYAVTYEDGEGDWMQVGDVP 168
Query: 238 WDLFTTICRKLKIM 251
W+ F ++LKI+
Sbjct: 169 WEAFAKSVKRLKIL 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.313 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,859,406
Number of extensions: 223486
Number of successful extensions: 545
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 505
Number of HSP's successfully gapped: 26
Length of query: 271
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 172
Effective length of database: 11,866,615
Effective search space: 2041057780
Effective search space used: 2041057780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 155 (64.3 bits)