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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0797800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : AUX/IAA protein family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.93 (0.0217) R2 : 0.0432
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.207 (0.0457) R2dN8 : 0.0557 R2N8 : 0.0432
σ : 0.409
deviance : 76.81
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.09 0.402 2.93 0.201 0.225 0.168 0.0778 0.0096 0.178 5.53 89.8 8 -- --
73.09 0.398 2.93 0.2 0.225 0.168 0.0725 -- 0.178 5.54 89.8 7 -- --
73.1 0.398 2.93 0.2 0.224 0.165 -- -0.00561 0.179 5.65 89.74 7 -- --
73.1 0.398 2.93 0.2 0.224 0.164 -- -- 0.179 5.64 89.72 7 -- --
75.26 0.404 2.93 0.192 -- 0.0935 -- -0.0115 0.203 -- 89.35 8 -- --
74.63 0.405 2.92 0.174 0.159 -- -0.075 -- 0.224 7.67 -- -- -- --
74.65 0.405 2.92 0.172 0.159 -- -- -- 0.224 7.61 -- -- -- --
75.26 0.404 2.93 0.193 -- 0.0931 -- -- 0.203 -- 89.04 8 -- --
74.14 0.401 2.93 -- 0.219 0.149 -- -- 0.161 5.73 89.8 7 -- --
76.01 0.407 2.92 0.175 -- -- -- -- 0.227 -- -- -- -- --
75.43 0.406 2.92 -- 0.161 -- -- -- 0.205 7.54 -- -- -- --
76.23 0.407 2.93 -- -- 0.0814 -- -- 0.185 -- 89.78 7 -- --
76.81 0.409 2.93 -- -- -- -- -- 0.207 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.16 precipitation 0.1 270 > th dose independent rect. 8 1
2 68.16 precipitation 0.1 270 > th dose dependent rect. 8 1
3 69.13 wind 1.0 10 < th dose independent rect. 11 1
5 69.37 temperature 25.0 90 > th dose independent rect. 8 1
6 69.50 temperature 25.0 90 > th dose dependent rect. 8 1
10 69.68 radiation 20.0 90 < th dose independent rect. 8 1
13 69.88 radiation 20.0 10 < th dose independent rect. 8 2
14 69.89 humidity 80.0 10 > th dose independent rect. 12 1
20 70.23 temperature 25.0 10 > th dose independent rect. 8 2
24 70.34 radiation 10.0 10 > th dose independent rect. 8 1
26 70.35 wind 5.0 30 < th dose independent rect. 8 1
27 70.35 atmosphere 995.0 30 > th dose dependent rect. 8 1
30 70.36 wind 1.0 30 > th dose independent rect. 8 1
33 70.36 temperature 10.0 30 > th dose independent rect. 8 1
36 70.36 temperature 30.0 30 < th dose independent rect. 8 1
37 70.36 humidity 50.0 30 > th dose independent rect. 8 1
40 70.36 humidity 80.0 30 < th dose independent rect. 8 1
42 70.36 atmosphere 995.0 30 > th dose independent rect. 8 1
45 70.36 atmosphere 1010.0 30 < th dose independent rect. 8 1
51 70.36 precipitation 0.1 30 < th dose independent rect. 8 1
52 70.36 temperature 10.0 30 > th dose independent rect. 9 23
53 70.36 wind 7.0 30 < th dose dependent rect. 8 1
59 70.36 radiation 1.0 30 > th dose dependent rect. 8 1
60 70.36 precipitation 0.1 30 < th dose dependent rect. 8 1
62 70.37 temperature 10.0 1440 > th dose independent rect. 9 1
65 70.37 atmosphere 995.0 1440 > th dose independent rect. 9 1
68 70.37 atmosphere 1015.0 1440 < th dose independent rect. 9 1
69 70.37 temperature 10.0 1440 > th dose independent rect. 10 23
72 70.37 wind 1.0 30 > th dose dependent rect. 8 1
77 70.37 humidity 50.0 30 > th dose dependent rect. 8 1
78 70.37 humidity 90.0 30 < th dose dependent rect. 8 1
84 70.38 radiation 40.0 30 < th dose dependent rect. 8 1
90 70.40 atmosphere 1015.0 30 < th dose dependent rect. 8 1
92 70.41 atmosphere 995.0 30 > th dose independent rect. 9 23
97 70.43 precipitation 0.1 30 < th dose independent rect. 9 23
98 70.43 precipitation 0.1 30 < th dose dependent rect. 9 23
103 70.46 humidity 50.0 1440 > th dose independent rect. 9 1
120 70.47 temperature 30.0 30 < th dose dependent rect. 8 1
145 70.66 wind 9.0 30 < th dose independent rect. 9 23
155 70.83 wind 1.0 90 < th dose dependent rect. 10 1
160 70.95 atmosphere 995.0 720 > th dose independent rect. 5 16
168 71.06 atmosphere 995.0 720 > th dose independent rect. 9 8
171 71.07 temperature 25.0 30 > th dose dependent rect. 22 12
172 71.09 temperature 25.0 90 > th dose dependent rect. 3 6
177 71.12 humidity 50.0 30 > th dose independent rect. 9 23
188 71.19 atmosphere 995.0 720 > th dose independent rect. 17 16
206 71.32 temperature 30.0 10 < th dose independent rect. 9 23
209 71.32 wind 3.0 10 < th dose dependent rect. 8 4
222 71.34 temperature 10.0 720 > th dose independent rect. 21 8
223 71.34 temperature 30.0 720 < th dose independent rect. 21 8
224 71.34 humidity 50.0 720 > th dose independent rect. 21 8
227 71.34 atmosphere 995.0 720 > th dose independent rect. 21 8
228 71.34 radiation 20.0 720 < th dose independent rect. 21 8
231 71.34 temperature 10.0 720 > th dose independent rect. 5 16
233 71.34 radiation 40.0 720 < th dose dependent rect. 21 8
239 71.37 wind 9.0 720 < th dose independent rect. 21 8
244 71.38 temperature 10.0 720 > th dose independent rect. 9 8
245 71.38 atmosphere 1015.0 720 < th dose independent rect. 9 8
247 71.38 temperature 10.0 720 > th dose independent rect. 17 16
255 71.42 humidity 90.0 30 < th dose independent rect. 22 1
256 71.42 humidity 70.0 10 > th dose independent rect. 8 5
259 71.43 wind 9.0 1440 < th dose independent rect. 23 1
260 71.43 temperature 10.0 1440 > th dose independent rect. 23 1
263 71.43 temperature 30.0 1440 < th dose independent rect. 23 1
267 71.43 humidity 50.0 1440 > th dose independent rect. 23 1
277 71.43 atmosphere 995.0 1440 > th dose independent rect. 23 1
278 71.43 radiation 1.0 1440 < th dose independent rect. 23 1
299 71.43 temperature 10.0 1440 > th dose independent rect. 24 23
302 71.43 radiation 1.0 1440 < th dose dependent rect. 23 1
307 71.44 precipitation 0.1 720 < th dose independent rect. 1 8
309 71.44 temperature 25.0 30 > th dose dependent rect. 22 1
310 71.44 precipitation 0.1 720 < th dose dependent rect. 1 8
311 71.45 temperature 25.0 30 > th dose independent rect. 22 1
314 71.47 radiation 20.0 10 < th dose independent rect. 8 18
316 71.47 atmosphere 1005.0 30 > th dose dependent rect. 22 1
320 71.49 humidity 90.0 30 < th dose dependent rect. 22 1
325 71.50 precipitation 0.1 30 < th dose independent rect. 22 1
326 71.50 precipitation 0.1 30 < th dose dependent rect. 22 1
328 71.51 atmosphere 1005.0 30 > th dose independent rect. 22 1
332 71.52 wind 1.0 30 > th dose independent rect. 22 1
333 71.52 wind 3.0 30 < th dose independent rect. 22 1
340 71.53 temperature 10.0 30 > th dose independent rect. 22 1
342 71.53 temperature 30.0 30 < th dose independent rect. 22 1
343 71.53 humidity 50.0 30 > th dose independent rect. 22 1
346 71.53 atmosphere 995.0 30 > th dose independent rect. 22 1
347 71.53 atmosphere 1010.0 30 < th dose independent rect. 22 1
349 71.53 radiation 1.0 30 < th dose independent rect. 22 1
354 71.53 temperature 10.0 30 > th dose independent rect. 23 23
355 71.53 wind 9.0 30 < th dose dependent rect. 22 1
356 71.53 radiation 1.0 30 < th dose dependent rect. 22 1
375 71.57 humidity 50.0 30 > th dose dependent rect. 22 1
383 71.60 precipitation 0.1 720 < th dose independent rect. 21 8
384 71.60 wind 1.0 30 > th dose dependent rect. 22 1
387 71.60 precipitation 0.1 720 < th dose dependent rect. 21 8
390 71.62 atmosphere 1015.0 30 < th dose dependent rect. 22 1
392 71.63 precipitation 0.1 720 < th dose independent rect. 9 8
393 71.63 precipitation 0.1 720 < th dose dependent rect. 9 8
402 71.70 temperature 25.0 30 > th dose dependent rect. 19 15
411 71.75 wind 1.0 90 < th dose independent rect. 10 1
412 71.75 temperature 30.0 720 < th dose independent rect. 17 16
413 71.76 temperature 30.0 30 < th dose dependent rect. 22 1
414 71.77 temperature 20.0 10 > th dose independent rect. 24 8
419 71.80 precipitation 0.1 720 < th dose independent rect. 5 16
420 71.80 precipitation 0.1 720 < th dose dependent rect. 5 16
427 71.84 humidity 80.0 30 < th dose independent rect. 1 8
429 71.84 wind 3.0 10 < th dose dependent rect. 11 1
457 71.90 radiation 20.0 10 < th dose independent rect. 8 16
465 71.92 humidity 80.0 90 > th dose independent rect. 23 9
472 71.94 wind 9.0 30 < th dose independent rect. 23 23
488 71.98 atmosphere 995.0 720 > th dose independent rect. 13 8
497 72.00 humidity 90.0 90 < th dose dependent rect. 19 14
502 72.01 humidity 80.0 30 < th dose independent rect. 19 14
503 72.01 humidity 90.0 10 < th dose independent rect. 8 22
551 72.09 atmosphere 995.0 720 > th dose independent rect. 9 16
585 72.15 humidity 90.0 270 > th dose dependent rect. 8 2
588 72.17 humidity 90.0 10 < th dose independent rect. 22 8
592 72.17 humidity 60.0 10 > th dose dependent rect. 18 14
597 72.18 humidity 50.0 720 > th dose independent rect. 21 16
611 72.20 temperature 15.0 10 > th dose dependent rect. 24 8
612 72.21 temperature 25.0 10 > th dose independent rect. 22 12
617 72.22 radiation 1.0 720 < th dose independent rect. 21 18
631 72.24 wind 5.0 30 < th dose dependent rect. 23 9
633 72.24 humidity 90.0 90 < th dose dependent rect. 19 11
634 72.24 humidity 90.0 90 < th dose dependent rect. 21 12
636 72.25 humidity 90.0 10 < th dose independent rect. 19 11
649 72.28 humidity 80.0 10 > th dose independent sin 8 NA
652 72.28 humidity 80.0 30 < th dose independent rect. 5 4
655 72.28 wind 3.0 30 < th dose independent rect. 23 9
666 72.29 radiation 1.0 720 < th dose independent rect. 21 13
671 72.30 radiation 1.0 720 < th dose independent rect. 21 11
674 72.30 humidity 90.0 10 < th dose independent rect. 22 16
697 72.34 temperature 25.0 90 > th dose independent rect. 3 7
698 72.34 temperature 10.0 720 > th dose independent rect. 13 8
699 72.34 temperature 10.0 720 > th dose independent rect. 21 16
700 72.34 atmosphere 995.0 720 > th dose independent rect. 21 16
703 72.34 humidity 90.0 10 < th dose dependent rect. 22 8
704 72.34 radiation 30.0 10 < th dose dependent rect. 8 18
706 72.35 precipitation 0.1 720 < th dose independent rect. 13 8
711 72.35 precipitation 0.1 720 < th dose dependent rect. 13 8
713 72.35 humidity 50.0 10 > th dose dependent rect. 14 18
719 72.36 humidity 50.0 30 > th dose dependent rect. 8 5
725 72.37 atmosphere 1000.0 90 < th dose dependent rect. 22 1
737 72.38 humidity 90.0 90 < th dose dependent rect. 19 7
744 72.39 temperature 30.0 720 < th dose independent rect. 1 8
753 72.41 wind 9.0 720 < th dose independent rect. 17 16
770 72.43 atmosphere 1015.0 30 < th dose independent rect. 9 23
773 72.43 humidity 60.0 10 > th dose dependent rect. 16 16
783 72.44 radiation 1.0 720 < th dose dependent rect. 21 17
786 72.45 wind 9.0 720 < th dose independent rect. 1 8
789 72.45 precipitation 0.1 720 < th dose independent rect. 17 16
794 72.45 precipitation 0.1 720 < th dose dependent rect. 17 16
800 72.46 humidity 90.0 10 < th dose dependent rect. 22 5
807 72.47 temperature 10.0 720 > th dose independent rect. 1 8
808 72.47 humidity 50.0 720 > th dose independent rect. 1 8
809 72.47 atmosphere 995.0 720 > th dose independent rect. 1 8
810 72.47 temperature 10.0 720 > th dose independent rect. 9 16
814 72.48 atmosphere 1010.0 10 < th dose independent rect. 8 18
818 72.48 temperature 25.0 10 > th dose dependent rect. 22 7
834 72.49 radiation 1.0 720 < th dose dependent rect. 21 13
841 72.50 radiation 1.0 90 > th dose independent rect. 9 22
847 72.50 humidity 70.0 90 > th dose dependent rect. 23 9
850 72.50 radiation 1.0 720 < th dose dependent rect. 21 11
886 72.52 humidity 50.0 30 > th dose dependent rect. 23 9
900 72.53 humidity 90.0 10 < th dose independent rect. 19 19
920 72.55 humidity 50.0 720 > th dose independent rect. 17 16
934 72.55 humidity 60.0 10 > th dose dependent rect. 20 12
969 72.57 humidity 80.0 90 > th dose dependent rect. 23 11
994 72.59 wind 7.0 30 < th dose dependent rect. 20 12
997 72.59 wind 9.0 30 < th dose dependent rect. 14 18