Os01g0286900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Auxin-responsive protein IAA31 (Indoleacetic acid-induced protein 31).
FiT-DB / Search/ Help/ Sample detail
|
Os01g0286900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Auxin-responsive protein IAA31 (Indoleacetic acid-induced protein 31).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.04 | 0.593 | 4.03 | 0.37 | 1.48 | 0.755 | 0.253 | 1.07 | 0.241 | 2.31 | 84.36 | 119 | -- | -- |
| 161.42 | 0.592 | 4.04 | 0.441 | 1.53 | 0.752 | 0.862 | -- | 0.251 | 2.28 | 84.51 | 140 | -- | -- |
| 159.13 | 0.588 | 4.03 | 0.352 | 1.49 | 0.776 | -- | 1.26 | 0.251 | 2.3 | 85.63 | 118 | -- | -- |
| 163.95 | 0.596 | 4.04 | 0.414 | 1.52 | 0.808 | -- | -- | 0.264 | 2.24 | 85.97 | 132 | -- | -- |
| 211.66 | 0.678 | 4.03 | 0.45 | -- | 1.76 | -- | 1.21 | 0.319 | -- | 71.39 | 66 | -- | -- |
| 176.83 | 0.623 | 4.06 | 0.533 | 1.96 | -- | 1.25 | -- | 0.124 | 2.68 | -- | -- | -- | -- |
| 182.27 | 0.632 | 4.07 | 0.502 | 1.96 | -- | -- | -- | 0.117 | 2.68 | -- | -- | -- | -- |
| 215.33 | 0.683 | 4.03 | 0.498 | -- | 1.78 | -- | -- | 0.297 | -- | 70.78 | 62 | -- | -- |
| 168.33 | 0.604 | 4.05 | -- | 1.5 | 0.868 | -- | -- | 0.222 | 2.16 | 85.43 | 156 | -- | -- |
| 406.75 | 0.942 | 4.06 | 0.586 | -- | -- | -- | -- | 0.166 | -- | -- | -- | -- | -- |
| 188.91 | 0.643 | 4.08 | -- | 1.97 | -- | -- | -- | 0.0606 | 2.68 | -- | -- | -- | -- |
| 221.82 | 0.694 | 4.04 | -- | -- | 1.79 | -- | -- | 0.244 | -- | 71.14 | 63 | -- | -- |
| 415.79 | 0.952 | 4.07 | -- | -- | -- | -- | -- | 0.101 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 145.33 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 3 | 145.82 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 4 | 145.89 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 6 | 146.49 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 3 | 4 |
| 10 | 146.88 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 11 | 146.92 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 21 |
| 12 | 146.92 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 19 | 147.27 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 20 | 147.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 22 | 147.27 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 23 | 147.27 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 26 | 147.27 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 32 | 147.27 | temperature | 10.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 39 | 147.64 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 42 | 147.78 | wind | 9.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 47 | 147.83 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 53 | 147.97 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 56 | 148.04 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 60 | 148.15 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 7 |
| 65 | 148.24 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 3 |
| 66 | 148.24 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 69 | 148.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 90 | 148.54 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 100 | 148.82 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 122 | 148.93 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 3 | 3 |
| 142 | 149.09 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 149 | 149.20 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 160 | 149.40 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 165 | 149.44 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 171 | 149.56 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 176 | 149.61 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 6 |
| 181 | 149.73 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 196 | 150.00 | wind | 9.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 197 | 150.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 200 | 150.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 204 | 150.00 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 209 | 150.00 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 4 | 4 |
| 210 | 150.00 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 212 | 150.00 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 220 | 150.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 230 | 150.17 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 245 | 150.43 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 249 | 150.49 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 19 | 8 |
| 251 | 150.49 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 254 | 150.52 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 261 | 150.55 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 264 | 150.57 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 286 | 150.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 287 | 150.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 289 | 150.88 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 290 | 150.88 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 293 | 150.88 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 294 | 150.88 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 296 | 150.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 302 | 150.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 303 | 150.88 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 310 | 150.92 | wind | 5.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 316 | 150.95 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 330 | 151.02 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 333 | 151.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 23 |
| 335 | 151.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 336 | 151.06 | temperature | 10.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 337 | 151.06 | temperature | 30.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 338 | 151.06 | humidity | 50.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 340 | 151.06 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 341 | 151.06 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 346 | 151.06 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 347 | 151.06 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 16 |
| 348 | 151.06 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 377 | 151.19 | humidity | 80.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 403 | 151.26 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 404 | 151.27 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 4 | 4 |
| 407 | 151.29 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 410 | 151.30 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 413 | 151.34 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 415 | 151.34 | temperature | 30.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 416 | 151.34 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 419 | 151.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 4 |
| 420 | 151.34 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 422 | 151.34 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 433 | 151.35 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 436 | 151.36 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 464 | 151.56 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 16 |
| 479 | 151.66 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 497 | 151.72 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 503 | 151.75 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 552 | 152.07 | wind | 9.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 584 | 152.13 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 24 | 6 |
| 604 | 152.20 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 4 |
| 607 | 152.20 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 616 | 152.27 | radiation | 1.0 | 270 | < th | dose independent | rect. | 1 | 17 |
| 707 | 152.56 | wind | 1.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 708 | 152.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 732 | 152.69 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 1 |
| 735 | 152.71 | humidity | 80.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 737 | 152.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 1 |
| 738 | 152.72 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 778 | 152.98 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 16 |
| 780 | 152.98 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 793 | 153.09 | wind | 9.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 808 | 153.17 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 3 | 3 |
| 852 | 153.33 | wind | 3.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 868 | 153.40 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 1 | 4 |
| 874 | 153.42 | radiation | 10.0 | 30 | < th | dose independent | rect. | 3 | 19 |
| 885 | 153.46 | wind | 9.0 | 10 | < th | dose dependent | rect. | 20 | 7 |
| 886 | 153.47 | temperature | 20.0 | 30 | > th | dose independent | rect. | 3 | 6 |
| 891 | 153.48 | wind | 5.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 939 | 153.58 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 940 | 153.59 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 24 | 6 |
| 964 | 153.62 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 16 |