BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0601300 Os12g0601300|AK068213
(277 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 358 2e-99
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 232 2e-61
Os03g0742900 Aux /IAA protein 193 1e-49
Os06g0335500 AUX/IAA protein family protein 191 7e-49
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 171 6e-43
Os05g0559400 Similar to IAA11 (Fragment) 171 6e-43
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 167 9e-42
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 166 1e-41
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 164 5e-41
Os06g0597000 Similar to Auxin responsive protein IAA-Re 155 3e-38
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 141 4e-34
Os03g0633800 Similar to IAA6 (Fragment) 135 2e-32
Os07g0182400 AUX/IAA protein family protein 132 2e-31
Os02g0817600 AUX/IAA protein family protein 130 8e-31
Os03g0797800 AUX/IAA protein family protein 117 1e-26
Os09g0527700 Similar to Auxin-induced protein IAA4 114 8e-26
Os05g0523300 Similar to IAA8 (Fragment) 111 6e-25
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 107 8e-24
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 104 8e-23
Os08g0109400 AUX/IAA protein family protein 99 5e-21
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 96 3e-20
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 85 5e-17
Os06g0355300 84 9e-17
Os02g0723400 AUX/IAA protein family protein 82 4e-16
Os06g0166500 Similar to Auxin-responsive protein IAA20 (Ind... 75 7e-14
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 358 bits (920), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 190/277 (68%), Positives = 190/277 (68%)
Query: 1 MAADLAFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXETIDLKLKLEPXXXXXXXXX 60
MAADLAFEATELRLGLP ETIDLKLKLEP
Sbjct: 1 MAADLAFEATELRLGLPGGGGDGDAAAAAARSSSGKRGFAETIDLKLKLEPAAAAVDDDD 60
Query: 61 XXXXXXXXXXXXXXXIVXXXXXXXXXXXXXXXXXMKRSPSQSSVVTAAADPEKPRAPKAQ 120
IV MKRSPSQSSVVTAAADPEKPRAPKAQ
Sbjct: 61 DKEEAAADDREKKVDIVGADNDDASPPAAAAAGGMKRSPSQSSVVTAAADPEKPRAPKAQ 120
Query: 121 VVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKM 180
VVGWPPVRSYRKNILAVQ FVKVSMDGAPYLRKVDLKM
Sbjct: 121 VVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKM 180
Query: 181 YKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVG 240
YKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVG
Sbjct: 181 YKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVG 240
Query: 241 DVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
DVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS
Sbjct: 241 DVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 138/265 (52%), Positives = 150/265 (56%), Gaps = 43/265 (16%)
Query: 3 ADLAFEATELRLGLPXXXXXXXXXXXXXXXXXXXXXXXETIDLKLKLEPXXXXXXXXXXX 62
A L F+ TELRLGLP ETIDLKLKL+P
Sbjct: 2 AGLGFDETELRLGLPGAGELAARSSGKRGFA-------ETIDLKLKLQPAAPAAVSGEEG 54
Query: 63 XXXXXXXXXXXXXIVXXXXXXXXXXXXXXXXXMKRSPSQSSVVTAAADPEKPRAPKAQVV 122
MKRS SQSSVVTA DP+KPRAPKAQVV
Sbjct: 55 AQEDKEDADAAAAAADEKMS------------MKRSASQSSVVTAEPDPDKPRAPKAQVV 102
Query: 123 GWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKMYK 182
GWPPVRS+RKN+LA + VKVSMDGAPYLRK+D+ MYK
Sbjct: 103 GWPPVRSFRKNVLAEKCKAAA------------------LVKVSMDGAPYLRKIDVAMYK 144
Query: 183 SYLELSKALEKMFSSFTIGNCGSHGVNGMNES-KIADLLNGSEYVPTYEDKDGDWMLVGD 241
SY ELS A + MF+SFTIG CGSH + ES K+ D L EYVPTYEDKDGDWMLVGD
Sbjct: 145 SYPELSMAFQNMFTSFTIGKCGSH--QQLKESNKLRDDL---EYVPTYEDKDGDWMLVGD 199
Query: 242 VPWEMFVESCKRLRIMKGSEAIGLA 266
VPWEMFVESCKRLRIMKGSEAIGL
Sbjct: 200 VPWEMFVESCKRLRIMKGSEAIGLG 224
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 111/165 (67%), Gaps = 17/165 (10%)
Query: 118 KAQVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXX-----XXXXXXXFVKVSMDGAPY 172
KAQ VGWPPVRS+R+NI+ VQ FVKVSMDGAPY
Sbjct: 84 KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPY 143
Query: 173 LRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDK 232
LRKVDLKMY SY +LS AL+KMF +FT N MNE +NGS+ V TYEDK
Sbjct: 144 LRKVDLKMYNSYKDLSLALQKMFGTFTATG------NNMNE------VNGSDAVTTYEDK 191
Query: 233 DGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
DGDWMLVGDVPW+MFVESCKRLRIMKGSEAIGLAPRA +K KN+S
Sbjct: 192 DGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRAKDKYKNKS 236
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/160 (59%), Positives = 115/160 (71%), Gaps = 5/160 (3%)
Query: 121 VVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKM 180
VVGWPP+RSYRKN +A+ +VKVSMDGAPYLRKVDLKM
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCL--YVKVSMDGAPYLRKVDLKM 166
Query: 181 YKSYLELSKALEKMFSSFTIGNC---GSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWM 237
YK+Y ELS ALEKMFS FT+G+ G G +G+++ ++ DL NG+E V TYEDKD DWM
Sbjct: 167 YKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWM 226
Query: 238 LVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
LVGDVPW MF +SC+RLRIMKGS+A+GLAPRA +K KNR+
Sbjct: 227 LVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 101/157 (64%), Gaps = 17/157 (10%)
Query: 121 VVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLKM 180
VVGWPP+RSYRKN +A +VKVSMDGAPYLRKVDLK
Sbjct: 124 VVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFL-----YVKVSMDGAPYLRKVDLKT 178
Query: 181 YKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVG 240
YK+Y ++S LEKMF F+ G G A+ EYV TYEDKDGDWMLVG
Sbjct: 179 YKNYKDMSLGLEKMFIGFSTGKEG------------AENQKDGEYVLTYEDKDGDWMLVG 226
Query: 241 DVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
DVPWEMF +SC+RLRIMKGS+AIGLAPRA EK KNR+
Sbjct: 227 DVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 101/156 (64%), Gaps = 9/156 (5%)
Query: 120 QVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLK 179
QVVGWPPVRSYRKN LA +VKVSMDGAPYLRKVDLK
Sbjct: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCC------YVKVSMDGAPYLRKVDLK 180
Query: 180 MYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTYEDKDGDW 236
Y SY +LS ALEKMFS F G SH + + + AD L EYV TYEDKD DW
Sbjct: 181 TYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADW 240
Query: 237 MLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEK 272
MLVGD+PW++F SC++LRIM+GS+A G+APR++E+
Sbjct: 241 MLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 167 bits (422), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 87/159 (54%), Positives = 108/159 (67%), Gaps = 21/159 (13%)
Query: 112 EKPRAPKAQVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAP 171
E P +PKA+VVGWPPVR++RKN LA FVKV++DGAP
Sbjct: 73 ESPPSPKARVVGWPPVRAFRKNALAALAAASSSKAK--------------FVKVAVDGAP 118
Query: 172 YLRKVDLKMYKSYLELSKALE-KMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYE 230
YLRKVDL+ Y+ Y +L AL+ K FS FTI G+ E K+ D ++G+EYVPTYE
Sbjct: 119 YLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNE------EMKLVDAVSGNEYVPTYE 172
Query: 231 DKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRA 269
DKDGDWMLVGDVPW+MFVE+C+RLR+MK SEA+ LAPR+
Sbjct: 173 DKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 103/153 (67%), Gaps = 30/153 (19%)
Query: 120 QVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLK 179
+VVGWPPVRS+RKN LA + FVKV++DGAPYLRKVDL+
Sbjct: 76 RVVGWPPVRSFRKNALAAK-----------------------FVKVAVDGAPYLRKVDLE 112
Query: 180 MYKSYLELSKALE-KMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWML 238
Y Y +L +AL+ K FS FTI +E K+ D +NG+EYVPTYEDKDGDWML
Sbjct: 113 AYSGYDQLLRALQDKFFSHFTIRKFAD------DERKLVDAVNGTEYVPTYEDKDGDWML 166
Query: 239 VGDVPWEMFVESCKRLRIMKGSEAIGLAPRAME 271
VGDVPW+MFVE+C+RLR+MK SEA+ LAPRA +
Sbjct: 167 VGDVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 100/157 (63%), Gaps = 9/157 (5%)
Query: 120 QVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVDLK 179
QVVGWPPVR+YRKN LA +VKVSMDGAPYLRKVDLK
Sbjct: 117 QVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPL------YVKVSMDGAPYLRKVDLK 170
Query: 180 MYKSYLELSKALEKMFSSFTIGNCG---SHGVNGMNESKIADLLNGSEYVPTYEDKDGDW 236
MY SY +LS ALEKMFS F G G S + + AD L EYV TYEDKD DW
Sbjct: 171 MYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADW 230
Query: 237 MLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKC 273
MLVGD+PW++F C++L+IM+GS+A G+APR++E+
Sbjct: 231 MLVGDLPWDLFTTICRKLKIMRGSDAAGIAPRSIEQS 267
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 98/156 (62%), Gaps = 20/156 (12%)
Query: 113 KPRAPKAQVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPY 172
KP +PKA+ VGWPPVR+YR+N L VKV++DGAPY
Sbjct: 54 KPPSPKARAVGWPPVRAYRRNAL------------------REDSARAKLVKVAVDGAPY 95
Query: 173 LRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDK 232
LRKVDL + Y L +AL MF+S G +K+ DL+ G+EYVPTYEDK
Sbjct: 96 LRKVDLAAHAGYAPLLRALHGMFASCLA--VRGGGGGDGEGTKLVDLVTGAEYVPTYEDK 153
Query: 233 DGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPR 268
DGDWMLVGDVPW+MFVESCKR+R+MK SEA+ L+PR
Sbjct: 154 DGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 88/153 (57%), Gaps = 18/153 (11%)
Query: 120 QVVGWPPVRSYRKNIL------AVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYL 173
QVVGWPPVRSYRK+ L FVKVSMDGAPYL
Sbjct: 53 QVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYL 112
Query: 174 RKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKD 233
RK+DLK+YK Y EL +ALE MF F+ G VN S++ TYEDKD
Sbjct: 113 RKIDLKVYKGYRELREALEAMFLCFSGGAAADAAVNP------------SDFAVTYEDKD 160
Query: 234 GDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLA 266
GD MLVGDVP+EMF+ +CKRLRIMKGSEA GL
Sbjct: 161 GDLMLVGDVPFEMFISTCKRLRIMKGSEARGLG 193
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 93/177 (52%), Gaps = 34/177 (19%)
Query: 114 PRAPKAQVVGWPPVRSYRKNILAVQXXX------------------XXXXXXXXXXXXXX 155
P KAQVVGWPPVRSYRK+ Q
Sbjct: 64 PPVAKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAA 123
Query: 156 XXXXXXFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESK 215
VKVSMDGAPYLRK+DL+MYK Y EL +ALE MF F S
Sbjct: 124 AANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF---------------SG 168
Query: 216 IADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGL-APRAME 271
AD N SE+ TY+DKDGD MLVGDVP++MF +CK+LRIMK SEA GL +PR M+
Sbjct: 169 AADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 14/166 (8%)
Query: 98 SPSQSSVVTAAADPEKPRAPKAQVVGWPPVRSYRKNIL-AVQXXXXXXXXXXXXXXXXXX 156
S + +S D + KAQVVGWPPVR+YR+N
Sbjct: 66 SGTGTSAAGDEHDDDTAAPAKAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQ 125
Query: 157 XXXXXFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKI 216
+VKVSMDGAPYLRKVDLKM K Y EL +AL+ +F+ C S +
Sbjct: 126 QGGGLYVKVSMDGAPYLRKVDLKMCKGYRELREALDLLFT-----KCFS--------ATA 172
Query: 217 ADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEA 262
+D + ++ YEDKDGD MLVGDVPWEMF+ SCK+LRIMKGSEA
Sbjct: 173 SDGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSEA 218
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 88/160 (55%), Gaps = 17/160 (10%)
Query: 121 VVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXX------------XXFVKVSMD 168
VVGWPP+R +R N L Q +VKV+MD
Sbjct: 111 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMD 170
Query: 169 GAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPT 228
G RKVDL ++SY L+ ALE MF+ +IG C SH N + K+ D N +EY T
Sbjct: 171 GEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSL---KLLD--NSAEYQLT 225
Query: 229 YEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPR 268
YED+DGDWMLVGDVPWEMFV S KRLRIM+ S+A GL R
Sbjct: 226 YEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 265
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 80/151 (52%), Gaps = 20/151 (13%)
Query: 116 APKAQVVGWPPVRSYRKNIL----AVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAP 171
A K QVVGWPPV SYR++ + +VKVSMDGAP
Sbjct: 62 ASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAP 121
Query: 172 YLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYED 231
YLRKVDL+MY Y EL AL+ +F F+ + + + YED
Sbjct: 122 YLRKVDLRMYGGYRELRDALDALFGCFSA----------------DASASAAHFAVAYED 165
Query: 232 KDGDWMLVGDVPWEMFVESCKRLRIMKGSEA 262
KDGD ML GDVPW+MF+ SCK+LRIM+GSEA
Sbjct: 166 KDGDLMLAGDVPWDMFISSCKKLRIMRGSEA 196
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/108 (54%), Positives = 67/108 (62%), Gaps = 14/108 (12%)
Query: 162 FVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLN 221
FVKVSMDG PYLRKVD+ Y YLEL +AL MF TIG + D
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIG--------------LMDGYG 92
Query: 222 GSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRA 269
E+ YED DGDWMLVGDVPWEMFV SCKR+R+M+ EA GL+ A
Sbjct: 93 EWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 102 SSVVTAAADPEKPRAPKA--QVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXX--X 157
S +AAA P+ A VVGWPP+RS+R+N+
Sbjct: 147 SPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPIC 206
Query: 158 XXXXFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIG----NCGSHGVNGMNE 213
VK++MDG P RKVDL++Y SY +LS A+E++F F +C G G +
Sbjct: 207 KKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAED 266
Query: 214 SKIADLLNGSE-YVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSE 261
+ LL+G+ Y YED DGD ML GD+PW++FV + KRLR+M+ SE
Sbjct: 267 KIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 86/160 (53%), Gaps = 18/160 (11%)
Query: 113 KPRAPKAQVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPY 172
+ R+P VVGWPPVR++R+N LA F+K++MDG P
Sbjct: 131 QTRSPSTPVVGWPPVRTFRRN-LATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPI 189
Query: 173 LRKVDLKMYKSYLELSKALEKMFSSF--------TIG--NCGSHGVNGMNESKIADLLNG 222
RK+DL + SY +LS A++K+F T G +C V I+ LL+G
Sbjct: 190 GRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDV------AISGLLDG 243
Query: 223 S-EYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSE 261
+ EY YED +GD +LVGDVPW MFV S KRLR++K S+
Sbjct: 244 TGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 7/154 (4%)
Query: 115 RAPKAQVVGWPPVRSYRKNILAVQXXXXXX--XXXXXXXXXXXXXXXXXFVKVSMDGAPY 172
R A VVGWPP+RS+R+N+ + VK++MDG P
Sbjct: 170 RGAAAPVVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPI 229
Query: 173 LRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVN----GMNESKIADLLNGS-EYVP 227
RK+DL Y SY LS A++++F F G ++ LL+GS EY
Sbjct: 230 GRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTL 289
Query: 228 TYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSE 261
YED +GD MLVGDVPW++FV + KRLR+++ SE
Sbjct: 290 VYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 19/164 (11%)
Query: 108 AADPEKPRAPKAQVVGWPPVRSYRKNILAVQ-----------XXXXXXXXXXXXXXXXXX 156
A E A AQ+VGWPPVR++RKN+ +
Sbjct: 80 AVQRENRAASSAQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERR 139
Query: 157 XXXXXFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKI 216
FVKV+++G RK+DLK ++SY LS+AL+ MF F S G+ ++++
Sbjct: 140 SSSTMFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGI-ATRDNEL 193
Query: 217 ADLLNGSE--YVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMK 258
+ GS+ YV YED +GD MLVGDVPWE+F+ S KRL I +
Sbjct: 194 QQMEEGSKKRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYIAQ 237
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 124 WPPVRSYRKNILAVQXXXXXXXXXXX--------XXXXXXXXXXXXFVKVSMDGAPYLRK 175
WPPVRS+R+N+ + FVK++MDG P RK
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
Query: 176 VDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGD 235
VDL Y Y +LS A++K+F + + + +++ G EY YED +GD
Sbjct: 134 VDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGE-ADAAAAGEMVGGGEYTLVYEDDEGD 192
Query: 236 WMLVGDVPWEMFVESCKRLRIMKGSE 261
MLVGDVPW+MF+ + KRLR++K S+
Sbjct: 193 RMLVGDVPWQMFIATAKRLRVLKSSD 218
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 69/145 (47%), Gaps = 35/145 (24%)
Query: 115 RAPKAQVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLR 174
R K VVGWPPV S R+ +VKV +G R
Sbjct: 70 RRRKKTVVGWPPVSSARRACGGAN-----------------------YVKVKKEGDAIGR 106
Query: 175 KVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVP--TYEDK 232
KVDL ++ SY EL+ L +MF + + E K+A+ +G P TYED
Sbjct: 107 KVDLALHSSYDELAATLARMFPTN----------DHQGEKKMANDDHGDAAGPVVTYEDG 156
Query: 233 DGDWMLVGDVPWEMFVESCKRLRIM 257
DGDWMLVGDVPW+ F S KRL+I+
Sbjct: 157 DGDWMLVGDVPWDDFARSVKRLKIL 181
>Os06g0355300
Length = 149
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Query: 112 EKPRAPKAQVVGWPPVRSYRKNI-----------LAVQXXXXXXXXXXXXXXXXXXXXXX 160
E A AQ+VGWPPVR++RKN+ +
Sbjct: 4 ENRAASSAQLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSST 63
Query: 161 XFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLL 220
FVKV+++G RK+DLK ++SY LS+AL+ MF F S G+ ++++ +
Sbjct: 64 MFVKVNLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFL-----SDGI-ATRDNELQRME 117
Query: 221 NGSE--YVPTYEDKDGDWMLVGDVPWE 245
GS+ YV YED +GD MLVGDVPWE
Sbjct: 118 EGSKKRYVLVYEDNEGDRMLVGDVPWE 144
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
Query: 162 FVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMF-SSFTIGNCGSH-GVNGMNESKIADL 219
FVKV M+G P RK+DL Y L L MF +S T +C V GM +K+
Sbjct: 105 FVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKV--- 161
Query: 220 LNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSE 261
+V TYED++GDWM+ GDVPWE+F+ S KRLRI + +
Sbjct: 162 ----HHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>Os06g0166500 Similar to Auxin-responsive protein IAA20 (Indoleacetic
acid-induced protein 20)
Length = 183
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 61/140 (43%), Gaps = 33/140 (23%)
Query: 118 KAQVVGWPPVRSYRKNILAVQXXXXXXXXXXXXXXXXXXXXXXXFVKVSMDGAPYLRKVD 177
+ ++VGWPPV+ + +VKV M+G RK+D
Sbjct: 76 RRKLVGWPPVKCLHRRRDGGCGGG--------------------YVKVKMEGLAIGRKLD 115
Query: 178 LKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWM 237
L + SY EL L MF S N+ D Y TYED +GDWM
Sbjct: 116 LSILGSYAELLDTLHLMFPS-------------TNQEDGHDRRRRHPYAVTYEDGEGDWM 162
Query: 238 LVGDVPWEMFVESCKRLRIM 257
VGDVPWE F +S KRL+I+
Sbjct: 163 QVGDVPWEAFAKSVKRLKIL 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,038,362
Number of extensions: 190598
Number of successful extensions: 730
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 691
Number of HSP's successfully gapped: 26
Length of query: 277
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 178
Effective length of database: 11,866,615
Effective search space: 2112257470
Effective search space used: 2112257470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)