BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0170400 Os12g0170400|AK121826
(465 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0170400 Zinc finger, C2H2-type domain containing protein 667 0.0
Os01g0871200 Zinc finger, C2H2-type domain containing protein 262 3e-70
Os03g0838800 Zinc finger, C2H2-type domain containing protein 244 1e-64
Os08g0562300 Zinc finger, C2H2-type domain containing protein 221 9e-58
Os04g0165200 Zinc finger, C2H2-type domain containing protein 206 4e-53
Os02g0572900 Zinc finger, C2H2-type domain containing protein 196 4e-50
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 102 5e-22
Os01g0859100 Similar to WIP1 protein (Fragment) 102 5e-22
Os09g0307400 100 3e-21
Os01g0935000 Zinc finger, C2H2-type domain containing protein 100 3e-21
Os09g0282300 Similar to WIP1 protein (Fragment) 99 1e-20
Os02g0518500 98 1e-20
Os01g0195000 Zinc finger, C2H2-type domain containing protein 97 2e-20
Os10g0419200 Zinc finger, C2H2-type domain containing protein 92 6e-19
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 92 6e-19
Os01g0242200 Zinc finger, C2H2-type domain containing protein 92 7e-19
Os08g0554400 Zinc finger, C2H2-type domain containing protein 92 8e-19
Os09g0555700 Zinc finger, C2H2-type domain containing protein 90 3e-18
AK067268 90 4e-18
Os02g0672100 Zinc finger, C2H2-type domain containing protein 88 2e-17
Os04g0566400 Zinc finger, C2H2-type domain containing protein 87 2e-17
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 87 3e-17
Os01g0572300 Zinc finger, C2H2-type domain containing protein 87 4e-17
Os03g0197700 Zinc finger, C2H2-type domain containing protein 79 7e-15
Os08g0504000 Similar to WIP5 protein 71 1e-12
Os09g0485600 Similar to WIP1 protein (Fragment) 70 3e-12
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/465 (74%), Positives = 345/465 (74%)
Query: 1 MDRDQMTNTMRDQAANLTSMNPLFYPFMADDALLGMAXXXXXXXXXSVSIQHMDWSPDTM 60
MDRDQMTNTMRDQAANLTSMNPLFYPFMADDALLGMA SVSIQHMDWSPDTM
Sbjct: 1 MDRDQMTNTMRDQAANLTSMNPLFYPFMADDALLGMAPPPPQQLLPSVSIQHMDWSPDTM 60
Query: 61 LDNLTFIEEKIRQVKDVIXXXXXXXXXXXXXXTPEQQLVNADLTCLIVQLISTAGSLLPS 120
LDNLTFIEEKIRQVKDVI TPEQQLVNADLTCLIVQLISTAGSLLPS
Sbjct: 61 LDNLTFIEEKIRQVKDVIRSMAGRRASSSSAATPEQQLVNADLTCLIVQLISTAGSLLPS 120
Query: 121 LKNSSFLSRTTPPPXXXXXXXXXXXXXXGESSSSAXXXXXXXXXXXXQMGSPDYDELFKV 180
LKNSSFLSRTTPPP GESSSSA QMGSPDYDELFKV
Sbjct: 121 LKNSSFLSRTTPPPAAAAGAAQAVSLAAGESSSSARNNETNREDEEEQMGSPDYDELFKV 180
Query: 181 WTNGGAMDECVGAAGDXXXXXXXXXXXXXXXXXXXXXXXXXXILAPHTHFCGICGKGFKR 240
WTNGGAMDECVGAAGD ILAPHTHFCGICGKGFKR
Sbjct: 181 WTNGGAMDECVGAAGDEQDARENPAAAAEEEKYEVLQLEEDEILAPHTHFCGICGKGFKR 240
Query: 241 DANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYSCPHAGCKRNRMHASFQPL 300
DANLRMHMRGHGDEYKSAAALAK RRYSCPHAGCKRNRMHASFQPL
Sbjct: 241 DANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYSCPHAGCKRNRMHASFQPL 300
Query: 301 KTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDK 360
KTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDK
Sbjct: 301 KTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDK 360
Query: 361 LFAHVALFQGHAPALXXXXXXXTSGRRRHKQEEPEFTWGGGGGNEFLDVKXXXXXXXXXX 420
LFAHVALFQGHAPAL TSGRRRHKQEEPEFTWGGGGGNEFLDVK
Sbjct: 361 LFAHVALFQGHAPALPPPPPPPTSGRRRHKQEEPEFTWGGGGGNEFLDVKGIAGVGSGSG 420
Query: 421 XXXXXXXXXXXXXMDFGFGQLDASLAMLLPSEQFAGDHQEENGDK 465
MDFGFGQLDASLAMLLPSEQFAGDHQEENGDK
Sbjct: 421 GGDEFFSAGSFGAMDFGFGQLDASLAMLLPSEQFAGDHQEENGDK 465
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 262 bits (670), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 122/184 (66%), Positives = 133/184 (72%), Gaps = 3/184 (1%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
ILAPHTHFC ICGKGFKRDANLRMHMRGHGDEYK+AAALAK RYS
Sbjct: 276 ILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAPVT---RYS 332
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP+ GCKRN+ H FQPLKTILCVKNHYKRSHC+K + C RC K+FSV+ADLKTHEKHC
Sbjct: 333 CPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTHEKHC 392
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVALFQGHAPALXXXXXXXTSGRRRHKQEEPEFTWGGGG 402
GRD+WLCSCGT+FSRKDKLF HVALFQGH PAL T + + E T G
Sbjct: 393 GRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGASEQPQGSEAMNTMVGSA 452
Query: 403 GNEF 406
G F
Sbjct: 453 GYNF 456
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 53 MDWSPDTMLDNLTFIEEKIRQVKDVIXXXXXXXXXXXXXXT---PEQQLVNADLTCLIVQ 109
MDW P ML NL+F+E+KI+QVKD++ + +QQLV ADLTC+I+Q
Sbjct: 91 MDWDPQAMLSNLSFLEQKIKQVKDIVQSMSNRESQVAGGSSEAQAKQQLVTADLTCIIIQ 150
Query: 110 LISTAGSLLPSLKN 123
LISTAGSLLPS+KN
Sbjct: 151 LISTAGSLLPSMKN 164
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 114/156 (73%), Positives = 124/156 (79%), Gaps = 3/156 (1%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRR-- 280
ILAPH HFCG+CGKGFKRDANLRMHMRGHG+EYKSAAALAK R
Sbjct: 158 ILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSPSRSPAAADAAARRR 217
Query: 281 -YSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHE 339
YSCP+ GCKRNR H SFQPLKT CVKNHY+RSHC+K C RC KRFSV+ADL+THE
Sbjct: 218 FYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHE 277
Query: 340 KHCGRDRWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375
KHCGRDRW+CSCGTSFSRKDKLFAHVA+F GH+PAL
Sbjct: 278 KHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGHSPAL 313
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 115/155 (74%), Gaps = 2/155 (1%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXX--XXXXXXXRR 280
+LA +TH+C +CGKGFKRDANLRMHMR HGDEYKS AAL+ R+
Sbjct: 198 LLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDETMAAAARK 257
Query: 281 YSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEK 340
YSCP GC+ NR HA FQPLK+++C KNHYKRSHC K +VC RCG K FSV++DL+THEK
Sbjct: 258 YSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVLSDLRTHEK 317
Query: 341 HCGRDRWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375
HCG RWLCSCGTSFSRKDKL HV+LF GH P +
Sbjct: 318 HCGDHRWLCSCGTSFSRKDKLIGHVSLFAGHQPVM 352
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 112/152 (73%), Gaps = 5/152 (3%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA +TH+C +CGKGFKRDANLRMHMR HGDEYK+AAAL YS
Sbjct: 197 LLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAAARRCS----YS 252
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP GC+ NR H FQ LK+++C KNHY+RSHC K +VCGRCG K+F+V++DL+THEKHC
Sbjct: 253 CPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLSDLRTHEKHC 312
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVALF-QGHAP 373
G RWLCSCGT FSRKDKL HVALF GHAP
Sbjct: 313 GELRWLCSCGTFFSRKDKLMGHVALFAAGHAP 344
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 114/155 (73%), Gaps = 6/155 (3%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA H HFC ICGKGF+RDANLRMHMR HGD +K+ AL++ R+S
Sbjct: 167 LLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPPAGREV----RFS 222
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGA-KRFSVMADLKTHEKH 341
CP+AGC RNR H F+PLK+ +C +NH++RSHC K + C RCG KRF+V+ADL++H +H
Sbjct: 223 CPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGKKRFAVLADLRSHLRH 282
Query: 342 CGRD-RWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375
CG + +W CSCGT+FSRKDKLF H+ALF+GH PA+
Sbjct: 283 CGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAI 317
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++ P C +C K F R N++MHM GHG EY+ K Y
Sbjct: 205 LIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLKLPC--YC 262
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
C AGC+ N H +PLK ++ HYKR H K C RC AK F+V D +THEK+C
Sbjct: 263 CA-AGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRC-AKPFAVKGDWRTHEKNC 320
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVALFQG 370
G+ RW C+CG+ F K L HV F G
Sbjct: 321 GK-RWFCACGSDFKHKRSLNDHVRSFGG 347
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++ P C +C K F R N++MHM GHG EY+ K Y
Sbjct: 210 LVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQTLAMLKLPC-----YC 264
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
C AGCK N H +PLK ++ HYKR H K C RC AK F+V D +THEK+C
Sbjct: 265 CA-AGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRC-AKPFAVKGDWRTHEKNC 322
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVALFQGH 371
G+ RW C+CG+ F K L HV F H
Sbjct: 323 GK-RWFCACGSDFKHKRSLNDHVRSFGAH 350
>Os09g0307400
Length = 385
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 223 ILAPHTHF-CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRR- 280
IL T F C +C K F R N++MHM GHG +Y+ + + R
Sbjct: 181 ILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAITVGGAAPPASLMRLP 240
Query: 281 -YSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHE 339
Y C GC+ N H +PLK ++ HY+R H + + C RCG KRF+V D +THE
Sbjct: 241 CYCCA-EGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG-KRFAVRGDWRTHE 298
Query: 340 KHCGRDRWLCSCGTSFSRKDKLFAHVALF-QGHAPAL 375
K+CG+ W C CG+ F K L HV F GHAP +
Sbjct: 299 KNCGK-LWFCVCGSDFKHKRSLKDHVRSFGGGHAPHI 334
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 74/145 (51%), Gaps = 8/145 (5%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + C ICGKGF+RD NL++H RGH +K L + R Y
Sbjct: 75 LLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWK----LRQRGGAGGGGGGEPPRKRVYV 130
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP A C H+ + L + +K H+ R H EK+ C RCG KR++V +D K H K C
Sbjct: 131 CPEASCVH---HSPSRALGDLTGIKKHFCRKHGEKKWKCDRCG-KRYAVHSDWKAHSKVC 186
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 187 GTREYKCDCGTVFSRRDSFVTHRAF 211
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 74/147 (50%), Gaps = 9/147 (6%)
Query: 223 ILAPHTHF-CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRY 281
IL THF C +C K F R NL+MHM GHG +Y+ +
Sbjct: 148 ILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPAAMLRLPCF----- 202
Query: 282 SCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKH 341
C AGC+ N H +PLK ++ HYKR HC K C +CG K +V D +THEK+
Sbjct: 203 -CCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG-KPLAVRGDWRTHEKN 260
Query: 342 CGRDRWLCSCGTSFSRKDKLFAHVALF 368
CGR RW C+CG+ F K L H+ F
Sbjct: 261 CGR-RWHCACGSDFKHKRSLKDHIRAF 286
>Os02g0518500
Length = 492
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + + C +C KGF+RD NL++H RGH +K + Y
Sbjct: 60 LLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWK-----------LKQRSSTEAKKKVYV 108
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + + L + +K HY R H EK+ C RC +K+++V +D K H K C
Sbjct: 109 CPEITCPH---HDATRALGDLTGIKKHYSRKHGEKKWKCDRC-SKKYAVQSDWKAHTKIC 164
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSRKD H A
Sbjct: 165 GTKEYRCDCGTIFSRKDSFITHRAF 189
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++A + + C ICGKGF+RD NL++H RGH +K + Y
Sbjct: 68 LMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWK----------LKQRNPKEVVRKKVYV 117
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP AGC H + L + +K H+ R H EK+ C +C +KR++V +D K H K C
Sbjct: 118 CPEAGCVH---HDPARALGDLTGIKKHFSRKHGEKKWKCDKC-SKRYAVHSDWKAHSKVC 173
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 174 GTREYRCDCGTLFSRRDSFITHRAF 198
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++A + C +C KGF+RD NL++H RGH +K A R Y
Sbjct: 33 LVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRAAAVSAVTTAAPAPRK--RVYV 90
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K H+ R H EKR C RCG KR++V +D K H K+C
Sbjct: 91 CPEPTCVH---HDPARALGDLTGIKKHFSRKHGEKRWRCERCG-KRYAVHSDWKAHVKNC 146
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CG FSRKD L H A
Sbjct: 147 GTREYRCDCGILFSRKDSLLTHRAF 171
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 9/151 (5%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++ P C +C K F R N++MHM GHG +Y+ +
Sbjct: 272 LIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCY------ 325
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
C AGC+ N H +PLK ++ HYKR H K +C +CG K F+V D +THEK+C
Sbjct: 326 CCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG-KAFAVRGDWRTHEKNC 384
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVALF-QGHA 372
G+ W C+CG+ F K L H+ F +GHA
Sbjct: 385 GK-LWYCACGSDFKHKRSLKDHIRAFGRGHA 414
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++A + C ICGKGF+RD NL++H RGH +K K R Y
Sbjct: 55 LMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRK-----------RVYV 103
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K H+ R H EK+ C +C +KR++V +D K H K C
Sbjct: 104 CPEKSCVH---HNPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKAHSKTC 159
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 160 GTREYRCDCGTLFSRRDSFITHRAF 184
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + C +C KGF+R+ NL++H RGH +K K R Y
Sbjct: 64 LLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRR-----------RVYL 112
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K HY R H EK+ C +C KR++V +D K H K C
Sbjct: 113 CPEPSCVH---HDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSDWKAHSKTC 168
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 169 GTREYRCDCGTLFSRRDSFITHRAF 193
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
++A + C +C KGF+R+ NL++H RGH +K K R Y
Sbjct: 70 LMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARR-----------RVYL 118
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K HY R H EK+ C +C +KR++V +D K H K C
Sbjct: 119 CPEPSCVH---HDPSRALGDLTGIKKHYCRKHGEKKWRCDKC-SKRYAVQSDWKAHSKTC 174
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 175 GTREYRCDCGTLFSRRDSFITHRAF 199
>AK067268
Length = 324
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + C +C KGF+R+ NL++H RGH +K K R Y
Sbjct: 64 LLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRR-----------RVYL 112
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K HY R H EK+ C +C KR++V +D K H K C
Sbjct: 113 CPEPSCVH---HDPSRALGNLTGIKKHYSRKHGEKKWKCDKCN-KRYAVQSDWKAHSKTC 168
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 169 GTREYRCDCGTLFSRRDSFITHRAF 193
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + C +C KGF+R+ NL++H RGH +K R Y
Sbjct: 89 LLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK----------LKQKNPLQAQRRRVYL 138
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K H+ R H EK+ C +C +KR++V +D K H K C
Sbjct: 139 CPEPTCVH---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKAHSKIC 194
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 195 GTREYRCDCGTLFSRRDSFITHRAF 219
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 14/145 (9%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + C +C KGF+R+ NL++H RGH +K R Y
Sbjct: 91 LLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK----------LKQKNPAQAQRRRVYL 140
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K H+ R H EK+ C +C +KR++V +D K H K C
Sbjct: 141 CPEPTCVH---HDPARALGDLTGIKKHFCRKHGEKKWKCDKC-SKRYAVQSDWKAHSKIC 196
Query: 343 GRDRWLCSCGTSFSRKDKLFAHVAL 367
G + C CGT FSR+D H A
Sbjct: 197 GTREYRCDCGTLFSRRDSFITHRAF 221
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 71/140 (50%), Gaps = 8/140 (5%)
Query: 223 ILAPHTHF-CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRY 281
ILA T F C +C K F R NL+MHM GHG +Y+ A Y
Sbjct: 53 ILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAALRGAQPTAMLRLPC----Y 108
Query: 282 SCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKH 341
C AGC+ + H +PLK ++ HY+R H + C RC AKRF+V D +THEK+
Sbjct: 109 CCA-AGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRC-AKRFAVRGDWRTHEKN 166
Query: 342 CGRDRWLCSCGTSFSRKDKL 361
CGR W C+CG F K L
Sbjct: 167 CGRL-WRCACGAHFRHKRSL 185
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 14/137 (10%)
Query: 231 CGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYSCPHAGCKR 290
C ICGKGF+RD NL++H RGH +K +K + Y CP A C
Sbjct: 8 CEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRK----------KVYICPEASCVH 57
Query: 291 NRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCS 350
H + L + +K H+ R H EK+ C +C +K+++V +D K H K CG + C
Sbjct: 58 ---HDPSRALGDLTGIKKHFFRKHGEKKWKCDKC-SKKYAVHSDWKAHSKICGTREYKCD 113
Query: 351 CGTSFSRKDKLFAHVAL 367
CGT FSR+D H A
Sbjct: 114 CGTIFSRRDSFITHRAF 130
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYS 282
+LA + C IC KGF+RD NL++H RGH +K K R Y
Sbjct: 36 LLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGK-----------EVRKRVYV 84
Query: 283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342
CP C H + L + +K H+ R H EK+ C +C +K+++V +D K H K C
Sbjct: 85 CPEPTCVH---HDPSRALGDLTGIKKHFCRKHGEKKWKCDKC-SKKYAVQSDWKAHTKTC 140
Query: 343 GRDRWLCSCGTSFSR 357
G + C CGT FSR
Sbjct: 141 GSREYRCDCGTLFSR 155
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 244 LRMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYSCPHAGCKRNRMHASFQPLKTI 303
++MHM GHG +Y+ + Y C AGC+ N H +PLK
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPC-----YCCA-AGCRNNIDHPRARPLKDF 54
Query: 304 LCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDKLFA 363
++ HYKR H K +C +CG K F+V D +THEK+CG+ W C CG+ F K L
Sbjct: 55 RTLQTHYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGKL-WYCLCGSEFKHKRSLKD 112
Query: 364 HVALFQGH 371
H F GH
Sbjct: 113 HARAF-GH 119
>Os09g0485600 Similar to WIP1 protein (Fragment)
Length = 154
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 245 RMHMRGHGDEYKSAAALAKXXXXXXXXXXXXXXXRRYSCPHAGCKRNRMHASFQPLKTIL 304
+MHM GHG +Y+ + Y C AGC+ N H +PLK
Sbjct: 1 QMHMWGHGSQYRKGPESLRGIQPTAMLRLPC-----YCCA-AGCRNNIDHPRAKPLKDFR 54
Query: 305 CVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAH 364
++ HYKR H K +C +CG K F+V D +THEK+CG+ W C CG+ F K L H
Sbjct: 55 TLQTHYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGK-LWYCLCGSEFKHKRSLKDH 112
Query: 365 VALF 368
F
Sbjct: 113 ARAF 116
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.134 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,996,189
Number of extensions: 414798
Number of successful extensions: 1102
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1042
Number of HSP's successfully gapped: 29
Length of query: 465
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 361
Effective length of database: 11,605,545
Effective search space: 4189601745
Effective search space used: 4189601745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)