BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0419200 Os10g0419200|Os10g0419200
(409 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0419200 Zinc finger, C2H2-type domain containing protein 485 e-137
Os01g0195000 Zinc finger, C2H2-type domain containing protein 288 3e-78
Os01g0242200 Zinc finger, C2H2-type domain containing protein 280 1e-75
Os09g0555700 Zinc finger, C2H2-type domain containing protein 278 6e-75
Os08g0554400 Zinc finger, C2H2-type domain containing protein 277 8e-75
Os01g0935000 Zinc finger, C2H2-type domain containing protein 276 2e-74
Os02g0672100 Zinc finger, C2H2-type domain containing protein 270 1e-72
Os02g0518500 269 2e-72
AK067268 267 9e-72
Os04g0566400 Zinc finger, C2H2-type domain containing protein 261 8e-70
Os03g0197700 Zinc finger, C2H2-type domain containing protein 239 3e-63
Os01g0572300 Zinc finger, C2H2-type domain containing protein 229 3e-60
Os03g0237250 Zinc finger, C2H2-type domain containing protein 194 1e-49
Os09g0449400 Zinc finger, C2H2-type domain containing protein 193 2e-49
Os04g0165200 Zinc finger, C2H2-type domain containing protein 97 3e-20
Os12g0170400 Zinc finger, C2H2-type domain containing protein 95 9e-20
Os01g0871200 Zinc finger, C2H2-type domain containing protein 94 1e-19
Os08g0562300 Zinc finger, C2H2-type domain containing protein 92 8e-19
Os02g0572900 Zinc finger, C2H2-type domain containing protein 92 1e-18
Os09g0307400 91 1e-18
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 91 2e-18
Os01g0859100 Similar to WIP1 protein (Fragment) 91 2e-18
Os03g0838800 Zinc finger, C2H2-type domain containing protein 90 3e-18
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 85 1e-16
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 84 2e-16
Os09g0282300 Similar to WIP1 protein (Fragment) 81 1e-15
Os08g0504000 Similar to WIP5 protein 65 6e-11
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 485 bits (1248), Expect = e-137, Method: Compositional matrix adjust.
Identities = 265/409 (64%), Positives = 265/409 (64%)
Query: 1 MAAAQEPRAKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRG 60
MAAAQEPRAKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRG
Sbjct: 1 MAAAQEPRAKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRG 60
Query: 61 HNLPWKLRHRXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHG 120
HNLPWKLRHR RKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHG
Sbjct: 61 HNLPWKLRHRAAAVSAVTTAAPAPRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHG 120
Query: 121 EKRWRCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCDXXXXXXX 180
EKRWRCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD
Sbjct: 121 EKRWRCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCDALAEESA 180
Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLFLPFSTTPA 240
PPLFLPFSTTPA
Sbjct: 181 RLLAAANNSSSITTTTCNNSNISSNNNNNNINSISNSNNLLITSSSSSPPLFLPFSTTPA 240
Query: 241 ENPNPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYFDHLAFXXXXXVITGSSCNDDNSS 300
ENPNPN YFDHLAF VITGSSCNDDNSS
Sbjct: 241 ENPNPNQLLFLQQHQAAHHQLLLPQFQQPPSSPPAYFDHLAFGGGGGVITGSSCNDDNSS 300
Query: 301 IAGDVMVAAGGDSVSFGLTSEGSVTMHAGDVGRRRLTRDFLGVDHXXXXXXXXXXXXXXX 360
IAGDVMVAAGGDSVSFGLTSEGSVTMHAGDVGRRRLTRDFLGVDH
Sbjct: 301 IAGDVMVAAGGDSVSFGLTSEGSVTMHAGDVGRRRLTRDFLGVDHDAGEVDELELDELPA 360
Query: 361 XXSTTXXXXXXXXXXXXXXXXXXXXXXXXGSRQYLGRLPPVNETWSHNF 409
STT GSRQYLGRLPPVNETWSHNF
Sbjct: 361 DLSTTAAACQGCNFAAATTAACCATDFTTGSRQYLGRLPPVNETWSHNF 409
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 288 bits (738), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 131/167 (78%), Positives = 142/167 (85%), Gaps = 8/167 (4%)
Query: 7 PRAKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK 66
P AKKKRSLPGNPDPEAEVIALSPR L+ATNR+VCE+C KGFQRDQNLQLHRRGHNLPWK
Sbjct: 42 PPAKKKRSLPGNPDPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWK 101
Query: 67 LRHRXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRC 126
L+ R RK+VYVCPE CVHHDPARALGDLTGIKKHFSRKHGEK+W+C
Sbjct: 102 LKQRNPKEVV--------RKKVYVCPEAGCVHHDPARALGDLTGIKKHFSRKHGEKKWKC 153
Query: 127 ERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
++C KRYAVHSDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 154 DKCSKRYAVHSDWKAHSKVCGTREYRCDCGTLFSRRDSFITHRAFCD 200
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 127/165 (76%), Positives = 139/165 (84%), Gaps = 9/165 (5%)
Query: 9 AKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLR 68
AKKKR+LPG PDPEAEVIALSPR L+ATNRFVCE+C KGFQRDQNLQLHRRGHNLPWKLR
Sbjct: 31 AKKKRNLPGTPDPEAEVIALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLR 90
Query: 69 HRXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCER 128
R RKRVYVCPE +CVHH+P+RALGDLTGIKKHF RKHGEK+W+C++
Sbjct: 91 QRSGKEP---------RKRVYVCPEKSCVHHNPSRALGDLTGIKKHFCRKHGEKKWKCDK 141
Query: 129 CGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
C KRYAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 142 CSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 186
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 123/164 (75%), Positives = 140/164 (85%), Gaps = 9/164 (5%)
Query: 10 KKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRH 69
KKKR+ PGNP+P+AEVIALSPR L+ATNRFVCEVCNKGFQR+QNLQLHRRGHNLPWKL+
Sbjct: 47 KKKRNQPGNPNPDAEVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 106
Query: 70 RXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
+ R+RVY+CPEP+CVHHDP+RALGDLTGIKKH+ RKHGEK+WRC++C
Sbjct: 107 KNPKEA---------RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYCRKHGEKKWRCDKC 157
Query: 130 GKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
KRYAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 158 SKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 201
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 277 bits (709), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 121/164 (73%), Positives = 140/164 (85%), Gaps = 9/164 (5%)
Query: 10 KKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRH 69
KKKR+ PGNP+P+AEV+ALSP L+ATNRFVCEVCNKGFQR+QNLQLHRRGHNLPWKL+
Sbjct: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
Query: 70 RXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
+ R+RVY+CPEP+CVHHDP+RALGDLTGIKKH+SRKHGEK+W+C++C
Sbjct: 101 KNPKET---------RRRVYLCPEPSCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKC 151
Query: 130 GKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
KRYAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 152 NKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 195
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 139/166 (83%), Gaps = 2/166 (1%)
Query: 8 RAKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKL 67
+ KKKRSLPG PDP AEV+ALSPR L+ATNRFVCE+C KGFQRDQNLQLHRRGHNLPWKL
Sbjct: 50 KKKKKRSLPGTPDPSAEVVALSPRTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKL 109
Query: 68 RHRXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCE 127
R R RKRVYVCPE +CVHH P+RALGDLTGIKKHF RKHGEK+W+C+
Sbjct: 110 RQRGGAGGGGGGEPP--RKRVYVCPEASCVHHSPSRALGDLTGIKKHFCRKHGEKKWKCD 167
Query: 128 RCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
RCGKRYAVHSDWKAH K CGTREY+CDCG +FSR+DS +THRAFCD
Sbjct: 168 RCGKRYAVHSDWKAHSKVCGTREYKCDCGTVFSRRDSFVTHRAFCD 213
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 270 bits (691), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 122/164 (74%), Positives = 138/164 (84%), Gaps = 11/164 (6%)
Query: 10 KKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRH 69
KKKR+LP DP+AEVIALSP+ L+ATNRFVCEVCNKGFQR+QNLQLHRRGHNLPWKL+
Sbjct: 69 KKKRTLP---DPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 125
Query: 70 RXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
+ R+RVY+CPEPTCVHHDP+RALGDLTGIKKHF RKHGEK+W+C++C
Sbjct: 126 KNPLQAQ--------RRRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKC 177
Query: 130 GKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
KRYAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 178 SKRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCD 221
>Os02g0518500
Length = 492
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 117/167 (70%), Positives = 136/167 (81%), Gaps = 9/167 (5%)
Query: 7 PRAKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK 66
P KK+R PGNPDP+ EV+ALSP+ L+ATNR++CEVC+KGFQRDQNLQLHRRGHNLPWK
Sbjct: 34 PVVKKRRGHPGNPDPDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWK 93
Query: 67 LRHRXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRC 126
L+ R +K+VYVCPE TC HHD RALGDLTGIKKH+SRKHGEK+W+C
Sbjct: 94 LKQRSSTEA---------KKKVYVCPEITCPHHDATRALGDLTGIKKHYSRKHGEKKWKC 144
Query: 127 ERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
+RC K+YAV SDWKAH K CGT+EYRCDCG +FSRKDS +THRAFCD
Sbjct: 145 DRCSKKYAVQSDWKAHTKICGTKEYRCDCGTIFSRKDSFITHRAFCD 191
>AK067268
Length = 324
Score = 267 bits (683), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 120/164 (73%), Positives = 140/164 (85%), Gaps = 9/164 (5%)
Query: 10 KKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRH 69
KKKR+ PGNP+P+AEV+ALSP L+ATNRFVCEVCNKGFQR+QNLQLHRRGHNLPWKL+
Sbjct: 41 KKKRNQPGNPNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 100
Query: 70 RXXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
+ R+RVY+CPEP+CVHHDP+RALG+LTGIKKH+SRKHGEK+W+C++C
Sbjct: 101 KNPKET---------RRRVYLCPEPSCVHHDPSRALGNLTGIKKHYSRKHGEKKWKCDKC 151
Query: 130 GKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
KRYAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 152 NKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 195
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 261 bits (666), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 120/161 (74%), Positives = 135/161 (83%), Gaps = 10/161 (6%)
Query: 13 RSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXX 72
R+LP DP+AEVIALSP+ L+ATNRFVCEVCNKGFQR+QNLQLHRRGHNLPWKL+ +
Sbjct: 73 RNLPA--DPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNP 130
Query: 73 XXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKR 132
R+RVY+CPEPTCVHHDPARALGDLTGIKKHF RKHGEK+W+C++C KR
Sbjct: 131 AQAQ--------RRRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCSKR 182
Query: 133 YAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
YAV SDWKAH K CGTREYRCDCG LFSR+DS +THRAFCD
Sbjct: 183 YAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCD 223
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 110/145 (75%), Positives = 121/145 (83%), Gaps = 9/145 (6%)
Query: 17 GNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXX 76
G DP+AEVIALSP+ L+ATNRFVCE+CNKGFQRDQNLQLHRRGHNLPWKLR R
Sbjct: 20 GGADPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGKEV- 78
Query: 77 XXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVH 136
RKRVYVCPEPTCVHHDP+RALGDLTGIKKHF RKHGEK+W+C++C K+YAV
Sbjct: 79 --------RKRVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQ 130
Query: 137 SDWKAHVKNCGTREYRCDCGILFSR 161
SDWKAH K CG+REYRCDCG LFSR
Sbjct: 131 SDWKAHTKTCGSREYRCDCGTLFSR 155
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 101/140 (72%), Positives = 117/140 (83%), Gaps = 8/140 (5%)
Query: 34 VATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXXRKRVYVCPE 93
+ATNRFVCE+C KGFQRDQNLQLHRRGHNLPWKL+ R RK+VY+CPE
Sbjct: 1 MATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAV--------RKKVYICPE 52
Query: 94 PTCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVKNCGTREYRC 153
+CVHHDP+RALGDLTGIKKHF RKHGEK+W+C++C K+YAVHSDWKAH K CGTREY+C
Sbjct: 53 ASCVHHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCSKKYAVHSDWKAHSKICGTREYKC 112
Query: 154 DCGILFSRKDSLLTHRAFCD 173
DCG +FSR+DS +THRAFCD
Sbjct: 113 DCGTIFSRRDSFITHRAFCD 132
>Os03g0237250 Zinc finger, C2H2-type domain containing protein
Length = 251
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 116/168 (69%), Gaps = 15/168 (8%)
Query: 9 AKKKRSLPGNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLR 68
AK+KR PG PDP+AEV+ALSPR L+ ++R+VCE+C +GFQR+QNLQ+HRR H +PW+L
Sbjct: 49 AKRKRRPPGTPDPDAEVVALSPRTLLESDRYVCEICGQGFQREQNLQMHRRRHKVPWRLV 108
Query: 69 HR--------------XXXXXXXXXXXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKH 114
R RKRV+VCPEP+C+HHDPA ALGDL GIKKH
Sbjct: 109 KRPAAATAAEDGGAAGGGGGAGGGAGGGGARKRVFVCPEPSCLHHDPAHALGDLVGIKKH 168
Query: 115 FSRKHGEKR-WRCERCGKRYAVHSDWKAHVKNCGTREYRCDCGILFSR 161
F RKHG +R W C RC K YAV SD+KAH+K CGTR + CDCG +FSR
Sbjct: 169 FRRKHGGRRQWVCARCAKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSR 216
>Os09g0449400 Zinc finger, C2H2-type domain containing protein
Length = 164
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/143 (62%), Positives = 110/143 (76%), Gaps = 9/143 (6%)
Query: 20 DPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXX 79
DP+AEV++LSPR L+ ++R+VCE+CN+GFQRDQNLQ+HRR H +PWKL R
Sbjct: 30 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKR--------E 81
Query: 80 XXXXXRKRVYVCPEPTCVHHDPARALGDLTGIKKHFSRKH-GEKRWRCERCGKRYAVHSD 138
RKRV+VCPEPTC+HHDP+ ALGDL GIKKHF RKH G ++W C RC K YAVHSD
Sbjct: 82 AGEAARKRVFVCPEPTCLHHDPSHALGDLVGIKKHFRRKHSGHRQWACARCSKAYAVHSD 141
Query: 139 WKAHVKNCGTREYRCDCGILFSR 161
+KAH+K CGTR + CDCG +FSR
Sbjct: 142 YKAHLKTCGTRGHSCDCGRVFSR 164
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 22 EAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXX 81
E +V+ L L+A C+VC KGF+RD NL++H R H +K
Sbjct: 186 EVDVVELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTA--AALTSTGAGMR 243
Query: 82 XXXRKRVYVCPEPTCV---HHDPARALGDLTGIKKHFSRKHGEKRWRCERCG-KRYAVHS 137
R+ Y CP C H +AL + K H+ R H K + C RCG K++AV S
Sbjct: 244 AAARRCSYSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFAVLS 303
Query: 138 DWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAF 171
D + H K+CG + C CG FSRKD L+ H A
Sbjct: 304 DLRTHEKHCGELRWLCSCGTFFSRKDKLMGHVAL 337
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 74/153 (48%), Gaps = 6/153 (3%)
Query: 25 VIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK--LRHRXXXXXXXXXXXX 82
V+ L ++A + C +C KGF+RD NL++H RGH +K
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274
Query: 83 XXRKRVYVCPEPTCVH---HDPARALGDLTGIKKHFSRKHGEKRWRCERCG-KRYAVHSD 138
+R Y CP C H + L + +K H+ R H EKR C RCG KR++V +D
Sbjct: 275 PQPERRYSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMAD 334
Query: 139 WKAHVKNCGTREYRCDCGILFSRKDSLLTHRAF 171
K H K+CG + C CG FSRKD L H A
Sbjct: 335 LKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVAL 367
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 73/151 (48%), Gaps = 5/151 (3%)
Query: 25 VIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXX 84
V+ L ++A + C +C KGF+RD NL++H RGH +K
Sbjct: 268 VLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDSSLESAP 327
Query: 85 RKRVYVCPEPTCV---HHDPARALGDLTGIKKHFSRKHGEKRWRCERCG-KRYAVHSDWK 140
R Y CP C H + L + +K H+ R H +K + C RC K+++V +D K
Sbjct: 328 VTR-YSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLK 386
Query: 141 AHVKNCGTREYRCDCGILFSRKDSLLTHRAF 171
H K+CG ++ C CG FSRKD L H A
Sbjct: 387 THEKHCGRDKWLCSCGTTFSRKDKLFGHVAL 417
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 73/155 (47%), Gaps = 8/155 (5%)
Query: 25 VIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK----LRHRXXXXXXXXXX 80
+I L L+A C+VC KGF+RD NL++H R H +K L +
Sbjct: 190 IIELDAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDE 249
Query: 81 XXXXRKRVYVCPEPTCV---HHDPARALGDLTGIKKHFSRKHGEKRWRCERCG-KRYAVH 136
R Y CP+ C H + L + K H+ R H K + C RCG K ++V
Sbjct: 250 TMAAAARKYSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSVL 309
Query: 137 SDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAF 171
SD + H K+CG + C CG FSRKD L+ H +
Sbjct: 310 SDLRTHEKHCGDHRWLCSCGTSFSRKDKLIGHVSL 344
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 14 SLPGNPDPEA-------EVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK 66
S+P P EA +V+ L L+A + C++C KGF+RD NL++H R H +
Sbjct: 141 SVPQEPPQEAAKGDGDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHG--DR 198
Query: 67 LRHRXXXXXXXXXXXXXXRKRVYVCPEPTCVH---HDPARALGDLTGIKKHFSRKHGEKR 123
+ R+ + CP C H R L + HF R H K
Sbjct: 199 FKTLDALSRPGQPKPPAGREVRFSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKL 258
Query: 124 WRCERCG--KRYAVHSDWKAHVKNCGTR-EYRCDCGILFSRKDSLLTHRAF 171
+ CERCG KR+AV +D ++H+++CG ++RC CG FSRKD L H A
Sbjct: 259 YACERCGGKKRFAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLAL 309
>Os09g0307400
Length = 385
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 77/163 (47%), Gaps = 10/163 (6%)
Query: 17 GNPDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK-----LRHRX 71
G P I + LV + +F C VCNK F R N+Q+H GH ++ LR
Sbjct: 166 GGQAPSQYWIPSAAEILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLR-GA 224
Query: 72 XXXXXXXXXXXXXRKRVYVCPEP--TCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERC 129
R Y C E V H AR L D ++ H+ RKHG + + C RC
Sbjct: 225 ITVGGAAPPASLMRLPCYCCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRC 284
Query: 130 GKRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTH-RAF 171
GKR+AV DW+ H KNCG + + C CG F K SL H R+F
Sbjct: 285 GKRFAVRGDWRTHEKNCG-KLWFCVCGSDFKHKRSLKDHVRSF 326
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXXR 85
I + L+ +FVC VCNK F R N+Q+H GH ++ +
Sbjct: 198 IPTPAQILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATATLAMLK 257
Query: 86 KRVYVCPEP--TCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHV 143
Y C V H AR L D ++ H+ RKHG K + C RC K +AV DW+ H
Sbjct: 258 LPCYCCAAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRCAKPFAVKGDWRTHE 317
Query: 144 KNCGTREYRCDCGILFSRKDSLLTH-RAF 171
KNCG R + C CG F K SL H R+F
Sbjct: 318 KNCGKRWF-CACGSDFKHKRSLNDHVRSF 345
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 71/150 (47%), Gaps = 9/150 (6%)
Query: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXXR 85
I + LV +F+C VCNK F R N+Q+H GH +R
Sbjct: 203 IPTPAQILVGPVQFICHVCNKTFNRYNNMQMHMWGHGR----EYRKGPESLKGTQTLAML 258
Query: 86 KRVYVCPEPTC---VHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAH 142
K C C V H AR L D ++ H+ RKHG K +RC RC K +AV DW+ H
Sbjct: 259 KLPCYCCAAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRCAKPFAVKGDWRTH 318
Query: 143 VKNCGTREYRCDCGILFSRKDSLLTH-RAF 171
KNCG R + C CG F K SL H R+F
Sbjct: 319 EKNCGKRWF-CACGSDFKHKRSLNDHVRSF 347
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 78/164 (47%), Gaps = 9/164 (5%)
Query: 19 PDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK-----LRHRXXX 73
P EV+ + ++A + C VC KGF+RD NL++H RGH +K +
Sbjct: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKPGGSP 203
Query: 74 XXXXXXXXXXXRKRVYVCPEPTCV---HHDPARALGDLTGIKKHFSRKHGEKRWRCERCG 130
R+R Y CP C H + L T +K H+ R H +K + C RC
Sbjct: 204 SRSPAAADAAARRRFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Query: 131 -KRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCD 173
KR++V +D + H K+CG + C CG FSRKD L H A D
Sbjct: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD 307
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 69/149 (46%), Gaps = 7/149 (4%)
Query: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXXR 85
I + L+ +F C VC K F R N+Q+H GH ++ + R
Sbjct: 265 IPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYR---KGPESLRGTQPTAMLR 321
Query: 86 KRVYVCPEP--TCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHV 143
Y C + H AR L D ++ H+ RKHG K + C +CGK +AV DW+ H
Sbjct: 322 LPCYCCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHE 381
Query: 144 KNCGTREYRCDCGILFSRKDSLLTH-RAF 171
KNCG Y C CG F K SL H RAF
Sbjct: 382 KNCGKLWY-CACGSDFKHKRSLKDHIRAF 409
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXXR 85
I + + L +F C VC K F R NLQ+H GH + R R
Sbjct: 47 IPTAAQILAGATQFSCPVCRKTFNRYNNLQMHMWGHGS--QYRRGGTAALRGAQPTAMLR 104
Query: 86 KRVYVCPEPTCVH--HDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHV 143
Y C H H AR L D ++ H+ R+HG + + C RC KR+AV DW+ H
Sbjct: 105 LPCYCCAAGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRCAKRFAVRGDWRTHE 164
Query: 144 KNCGTREYRCDCGILFSRKDSL 165
KNCG R +RC CG F K SL
Sbjct: 165 KNCG-RLWRCACGAHFRHKRSL 185
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 26 IALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWKLRHRXXXXXXXXXXXXXXR 85
I + L+ F C VC K F R NLQ+H GH ++ R R
Sbjct: 142 IPTPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYR---RGPESLRGTQPAAMLR 198
Query: 86 KRVYVCPEP--TCVHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHV 143
+ C V H AR L D ++ H+ RKH K + C +CGK AV DW+ H
Sbjct: 199 LPCFCCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCGKPLAVRGDWRTHE 258
Query: 144 KNCGTREYRCDCGILFSRKDSLLTH-RAF 171
KNCG R + C CG F K SL H RAF
Sbjct: 259 KNCG-RRWHCACGSDFKHKRSLKDHIRAF 286
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 97 VHHDPARALGDLTGIKKHFSRKHGEKRWRCERCGKRYAVHSDWKAHVKNCGTREYRCDCG 156
+ H AR L D ++ H+ RKHG K + C +CGK +AV DW+ H KNCG Y C CG
Sbjct: 43 IDHPRARPLKDFRTLQTHYKRKHGLKPFLCRKCGKAFAVKGDWRTHEKNCGKLWY-CLCG 101
Query: 157 ILFSRKDSLLTH-RAF 171
F K SL H RAF
Sbjct: 102 SEFKHKRSLKDHARAF 117
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.136 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,777,220
Number of extensions: 363880
Number of successful extensions: 1215
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 1176
Number of HSP's successfully gapped: 30
Length of query: 409
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 306
Effective length of database: 11,657,759
Effective search space: 3567274254
Effective search space used: 3567274254
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)