BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0537600 Os06g0537600|AK063014
(150 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0537600 Zinc finger, RING-type domain containing protein 241 1e-64
Os06g0537300 89 2e-18
Os06g0539800 86 8e-18
Os06g0540400 Zinc finger, RING-type domain containing protein 83 7e-17
Os06g0536600 77 6e-15
Os06g0536100 75 1e-14
Os02g0249200 75 2e-14
Os06g0540200 75 2e-14
Os02g0249101 74 4e-14
Os12g0433100 Zinc finger, RING-type domain containing protein 74 4e-14
Os06g0537500 74 4e-14
Os02g0820200 Zinc finger, RING-type domain containing protein 73 8e-14
Os06g0695900 Zinc finger, RING-type domain containing protein 72 1e-13
Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1... 72 1e-13
Os02g0248280 71 3e-13
Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-... 70 4e-13
Os02g0692000 Similar to RING finger family protein 70 5e-13
Os03g0149800 Similar to RING-H2 finger protein ATL1D 70 8e-13
Os01g0755700 Zinc finger, RING-type domain containing protein 69 8e-13
Os06g0155200 69 9e-13
Os01g0212700 Zinc finger, RING-type domain containing protein 69 9e-13
Os01g0213200 68 2e-12
Os02g0572350 Zinc finger, RING-type domain containing protein 68 2e-12
AK109940 68 3e-12
Os08g0484200 Zinc finger, RING-type domain containing protein 67 4e-12
Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1... 67 5e-12
Os06g0535200 Zinc finger, RING-type domain containing protein 67 6e-12
Os06g0535900 67 6e-12
Os01g0213400 Zinc finger, RING-type domain containing protein 67 6e-12
Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-... 67 7e-12
Os02g0248900 66 9e-12
Os02g0247900 66 9e-12
Os09g0468300 Zinc finger, RING-type domain containing protein 65 1e-11
Os12g0432600 Zinc finger, RING-type domain containing protein 65 1e-11
Os05g0164200 Zinc finger, RING-type domain containing protein 65 1e-11
Os04g0590900 Similar to RING-H2 finger protein ATL1B 65 2e-11
Os02g0248320 Zinc finger, RING-type domain containing protein 65 2e-11
Os04g0450400 Zinc finger, RING-type domain containing protein 65 2e-11
AK064102 65 2e-11
Os05g0360300 64 3e-11
Os01g0213000 Zinc finger, RING-type domain containing protein 64 3e-11
Os08g0445000 Similar to RING-H2 finger protein ATL5A 64 3e-11
Os02g0561900 64 6e-11
Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-) 63 6e-11
Os03g0340100 63 7e-11
Os02g0561400 63 7e-11
Os02g0561000 63 7e-11
Os02g0560600 63 7e-11
Os02g0560200 63 7e-11
Os03g0398600 Zinc finger, RING-type domain containing protein 63 7e-11
Os06g0534900 Zinc finger, RING-type domain containing protein 63 9e-11
>Os06g0537600 Zinc finger, RING-type domain containing protein
Length = 150
Score = 241 bits (615), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/150 (82%), Positives = 123/150 (82%)
Query: 1 MRLEMSPDNLLFFCSVAASAAAGFCLFSLYXXXXXXXXXXXXXXXXXXXXXXXXXXXLTA 60
MRLEMSPDNLLFFCSVAASAAAGFCLFSLY LTA
Sbjct: 1 MRLEMSPDNLLFFCSVAASAAAGFCLFSLYRRLARRCHHHHAAPAGGSEEEEEERRRLTA 60
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS
Sbjct: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
Query: 121 HPTCPLCRCRVDHPGQGQETARQLAQLSPA 150
HPTCPLCRCRVDHPGQGQETARQLAQLSPA
Sbjct: 121 HPTCPLCRCRVDHPGQGQETARQLAQLSPA 150
>Os06g0537300
Length = 174
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 4/74 (5%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
VA+ +P F Y RH G G EC+VCLG + G V+ LPAC H+YHV+CID+WL+S
Sbjct: 81 VAAKIPEFAYAGSARHGGGG----ECSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLAS 136
Query: 121 HPTCPLCRCRVDHP 134
H TCP+CR V+ P
Sbjct: 137 HATCPICRTEVEPP 150
>Os06g0539800
Length = 167
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 49/72 (68%), Gaps = 4/72 (5%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
VA+ +P F Y RH G G EC+VCLG + G V+ LPAC H+YHV+CID+WL+S
Sbjct: 74 VAAKIPEFAYAGSARHGGGG----ECSVCLGAVQGGEAVRRLPACKHLYHVECIDMWLAS 129
Query: 121 HPTCPLCRCRVD 132
H TCPLCR V+
Sbjct: 130 HATCPLCRTEVE 141
>Os06g0540400 Zinc finger, RING-type domain containing protein
Length = 168
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 58 LTAVASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLW 117
+ VA+ +P F Y G+GA+ +C+VCLG + G MV+ LPAC H+YHV+CID+W
Sbjct: 79 VAGVAAKIPEFAYTGSA-SGGEGAA--QCSVCLGAVRGGEMVRRLPACKHLYHVECIDMW 135
Query: 118 LSSHPTCPLCRCRVDHPGQGQETAR 142
L+SH TCPLCR V+ P G + R
Sbjct: 136 LASHATCPLCRTEVEPP-PGDDGGR 159
>Os06g0536600
Length = 239
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHPGQG 137
ECAVCLG + G MV+ LPAC H+YH DCID WL++H TCPLCR +D PG+
Sbjct: 181 ECAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCPLCRRELD-PGKN 232
>Os06g0536100
Length = 190
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 9/77 (11%)
Query: 66 PAFMYDRLVRHSGKGASWT------ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLS 119
PA+ Y +V S G + ECAVCLG + G MV+ LPAC H+YH DCID WL+
Sbjct: 95 PAYAY--VVGSSDDGGATAASGVGRECAVCLGAVREGEMVRRLPACEHVYHADCIDRWLA 152
Query: 120 SHPTCPLCRCRVDHPGQ 136
+H TCPLCR +D PG+
Sbjct: 153 AHRTCPLCRRELD-PGK 168
>Os02g0249200
Length = 166
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Query: 63 SGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHP 122
+ +P F Y R +G G W +CA+CLGV+ G V+ LP C H++HV+C+D+WL SH
Sbjct: 89 AAIPKFAYRRGA--AGGGGGWAQCAICLGVVRDGEAVRRLPECKHLFHVECVDMWLYSHA 146
Query: 123 TCPLCR 128
TCPLCR
Sbjct: 147 TCPLCR 152
>Os06g0540200
Length = 127
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%), Gaps = 1/53 (1%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHPGQG 137
ECAVCLG + G MV+ LPAC H+YH DCID WL++H TCPLCR +D PG+
Sbjct: 69 ECAVCLGAVREGEMVRRLPACEHVYHADCIDRWLAAHRTCPLCRRELD-PGKN 120
>Os02g0249101
Length = 177
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 59 TAVASGLPAFMYDR------------LVRHSGKGASWTECAVCLGVIHVGAMVKLLPACA 106
+AVA+ LP+F+Y R G G W +CAVCL ++ G V+ LPAC
Sbjct: 78 SAVAT-LPSFVYRREEWAEAAPRGDGSGSGRGGGGGWAQCAVCLSIVQEGETVRQLPACK 136
Query: 107 HIYHVDCIDLWLSSHPTCPLCRCRVDHPGQGQETARQ 143
H++HV CID+WL SH TCPLCR V+ G+ Q
Sbjct: 137 HLFHVGCIDMWLHSHSTCPLCRASVEPLGKETPLKDQ 173
>Os12g0433100 Zinc finger, RING-type domain containing protein
Length = 212
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
V + +PAF Y + SG A +CAVC+GV+ G V+ LPAC H +H CID WL +
Sbjct: 133 VEAAIPAFEYSK---GSGGAAEAEQCAVCIGVVRRGETVRRLPACGHAFHAACIDGWLRA 189
Query: 121 HPTCPLCRCRVD 132
H TCP+CR V
Sbjct: 190 HATCPVCRADVK 201
>Os06g0537500
Length = 223
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 65 LPAFMYDRLVRHSGKGASWTE---------CAVCLGVIHVGAMVKLLPACAHIYHVDCID 115
+PAF Y R VR + G E C+VCLG +G V+LLPAC H+YH +CID
Sbjct: 134 VPAFTYSRSVRRNVGGDDGEEEETAAAAAACSVCLGAFQLGETVRLLPACLHLYHAECID 193
Query: 116 LWLSSHPTCPLCRCRVDHP 134
WL +H TCPLCR P
Sbjct: 194 PWLDAHTTCPLCRSDTGDP 212
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 72.8 bits (177), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 60 AVASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLS 119
A LPAF Y + ++ + +S ECAVC+ V+LLP+C H++HVDCID WL
Sbjct: 118 AAIQSLPAFRYRKAIKDTTADSS--ECAVCISEFQEEERVRLLPSCLHVFHVDCIDTWLQ 175
Query: 120 SHPTCPLCRCRV 131
+ CPLCR +
Sbjct: 176 GNANCPLCRAAI 187
>Os06g0695900 Zinc finger, RING-type domain containing protein
Length = 398
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 60 AVASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLS 119
AV LP F + L G+ A ECAVCLG ++LLP C H +HV+C+D WL
Sbjct: 95 AVVESLPVFRFGAL---RGQKAG-LECAVCLGRFEPTEALRLLPKCRHGFHVECVDTWLD 150
Query: 120 SHPTCPLCRCRVD 132
+H TCPLCR RVD
Sbjct: 151 AHSTCPLCRSRVD 163
>Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 349
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 60 AVASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLS 119
A + +P Y + +H G ECAVCL V G ++LLP C+H +H DCID WL
Sbjct: 97 AAVAAIPVVPYAEVRKHRSGGGGALECAVCLTVFDDGDDLRLLPQCSHAFHPDCIDPWLE 156
Query: 120 SHPTCPLCRCRVD 132
H TCPLCR ++
Sbjct: 157 GHVTCPLCRANLE 169
>Os02g0248280
Length = 189
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 60 AVASGLPAFMYDRLVRHSGKGASWTE-----CAVCLGVIHVGAMVKLLPACAHIYHVDCI 114
A LPAF Y R G G C+VCL + G MV+ LPAC H++HV CI
Sbjct: 80 AAIDALPAFAYARPAADDGGGGGSKSGRCALCSVCLEDVQAGEMVRQLPACRHLFHVGCI 139
Query: 115 DLWLSSHPTCPLCRCRVDHP 134
D+WL SH TCPLCRC V P
Sbjct: 140 DMWLHSHSTCPLCRCNVSPP 159
>Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 321
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 65 LPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTC 124
LP +Y + + +G ECAVCL + G V++LP C H +HV+CID+W SH TC
Sbjct: 93 LPVTVYAKPA--AARGEEALECAVCLSEVADGEKVRMLPKCDHGFHVECIDMWFHSHDTC 150
Query: 125 PLCRCRVDHPGQGQETARQLAQLSPA 150
PLCR V P G E ++ + PA
Sbjct: 151 PLCRAPVG-PDAGGEGLPRVPREEPA 175
>Os02g0692000 Similar to RING finger family protein
Length = 389
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 84 TECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRV 131
T+C+VCLG G ++LLP C+H +HV CID WL SH CPLCRC +
Sbjct: 162 TDCSVCLGEFREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLCRCNI 209
>Os03g0149800 Similar to RING-H2 finger protein ATL1D
Length = 300
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
V + LP Y R SGK AS ECAVCL +KLLP+C+H +H+DCID WL
Sbjct: 99 VVAALPVVKYRRAA--SGKSASPQECAVCLSEFVRDERLKLLPSCSHAFHIDCIDTWLHH 156
Query: 121 HPTCPLCRCRV 131
+ +CPLCR V
Sbjct: 157 NVSCPLCRTVV 167
>Os01g0755700 Zinc finger, RING-type domain containing protein
Length = 238
Score = 69.3 bits (168), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 65 LPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTC 124
LP Y ++ G + TECA+CLG + V++LPAC H++HV CID WL+S +C
Sbjct: 97 LPTAAYGKVAGGDAAGGT-TECAICLGAMQEADAVRVLPACRHVFHVACIDKWLASSSSC 155
Query: 125 PLCRCRVD 132
P+CR V+
Sbjct: 156 PVCRAGVE 163
>Os06g0155200
Length = 221
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 68 FMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLC 127
F Y R + G W +C++CLG+ VG V+ LP+C H++H C+D WL +H TCPLC
Sbjct: 148 FGYKREQTAAAAG-GWAQCSICLGLARVGEAVRRLPSCGHLFHAGCVDEWLRAHATCPLC 206
Query: 128 RCRV 131
R V
Sbjct: 207 RAAV 210
>Os01g0212700 Zinc finger, RING-type domain containing protein
Length = 185
Score = 69.3 bits (168), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 60 AVASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLS 119
A + LP F Y+ + +CAVCLG + G V+ LP C H++H +C+D WL
Sbjct: 77 AAIAALPTFGYEASAAAAAA----LDCAVCLGQVDAGEKVRQLPKCGHLFHAECVDAWLR 132
Query: 120 SHPTCPLCRCRVDHP 134
+H TCP+CR V+ P
Sbjct: 133 AHSTCPMCRAAVEGP 147
>Os01g0213200
Length = 233
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 6/71 (8%)
Query: 65 LPAFMYDRLVRHSGK-----GASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLS 119
LP+F Y R R G+ +S ECAVCL + G V+ LPAC H++H +CID+WLS
Sbjct: 92 LPSFPYVR-ARDDGEVSDSASSSSVECAVCLSAVDEGETVRQLPACGHVFHRECIDMWLS 150
Query: 120 SHPTCPLCRCR 130
S +CP+CR +
Sbjct: 151 SRASCPVCRGK 161
>Os02g0572350 Zinc finger, RING-type domain containing protein
Length = 325
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%)
Query: 84 TECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHP 134
T+C VCLG G +++LLP C H +HV CID WL +H CPLCR V HP
Sbjct: 107 TDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHVLHP 157
>AK109940
Length = 373
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%)
Query: 84 TECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHP 134
T+C VCLG G +++LLP C H +HV CID WL +H CPLCR V HP
Sbjct: 155 TDCPVCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHVLHP 205
>Os08g0484200 Zinc finger, RING-type domain containing protein
Length = 413
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 60 AVASGLPAFMYDRLVRH-SGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWL 118
AV P Y + H +GKGA ECAVCL ++LLP C+H +H DCID WL
Sbjct: 120 AVLGAFPTMAYADVKAHKAGKGA--LECAVCLSEFDDDETLRLLPRCSHAFHADCIDAWL 177
Query: 119 SSHPTCPLCRCRV 131
+SH TCP+CR +
Sbjct: 178 ASHVTCPVCRANL 190
>Os05g0596500 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 385
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
V LP F + L R + +G ECAVCL +++LLP C H +H+DC+D WL S
Sbjct: 103 VIESLPFFRFAAL-RGARQG---LECAVCLARFDDADLLRLLPRCRHAFHLDCVDRWLES 158
Query: 121 HPTCPLCRCRVD 132
+CPLCR RVD
Sbjct: 159 KASCPLCRARVD 170
>Os06g0535200 Zinc finger, RING-type domain containing protein
Length = 223
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 63 SGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHP 122
+ +PAF YD G A+ +CAVCL + G + LP+CAH +HV CID+WL SH
Sbjct: 134 ASIPAFAYDASAHGGGGEAA-AQCAVCLEALRGGETARRLPSCAHTFHVACIDMWLGSHA 192
Query: 123 TCPLCRCRVDHPGQG 137
TCP+CR RV+ +G
Sbjct: 193 TCPVCRRRVERKHKG 207
>Os06g0535900
Length = 192
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWL-S 119
V + LPA+ + + G ECA+CLG + G +VK LPAC H++H CID WL +
Sbjct: 105 VVAVLPAYAWRKKAAVDGDDGD-GECAICLGEVRRGQVVKQLPACTHLFHARCIDKWLIT 163
Query: 120 SHPTCPLCRCRVD 132
S TCP+CR VD
Sbjct: 164 SQGTCPVCRTPVD 176
>Os01g0213400 Zinc finger, RING-type domain containing protein
Length = 237
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 80 GASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHP 134
GA+ +CAVCL + G V+ LP C H++HV+C+D WL S TCPLCR + P
Sbjct: 123 GATAADCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAEAEVP 177
>Os02g0790600 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 428
Score = 66.6 bits (161), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 60 AVASGLPAFMYDRLVRHSGK-GASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWL 118
A LP F+Y +V G+ G +CAVCL ++LLP C+H +H++CID WL
Sbjct: 96 AFIDALPVFLYRNVVGVGGEDGKDPFDCAVCLCEFAADDQLRLLPKCSHAFHLECIDTWL 155
Query: 119 SSHPTCPLCR 128
SH TCPLCR
Sbjct: 156 LSHSTCPLCR 165
>Os02g0248900
Length = 195
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 58 LTAVA-SGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDL 116
LTA A LPA Y+R G A C+VCL + G V+ LPAC H+YH CID
Sbjct: 96 LTAAAIDALPASEYERPRGGGGDPA----CSVCLEDVRGGETVRWLPACGHLYHAACIDA 151
Query: 117 WLSSHPTCPLCRCRVDHPGQGQETARQLAQL 147
WL S TCPLCR + G + R +L
Sbjct: 152 WLRSRTTCPLCRSDLSSRRGGTASGRPRPRL 182
>Os02g0247900
Length = 209
Score = 66.2 bits (160), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 84 TECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVD 132
EC+VCLG + G K LP C H++H +CID+WL SH TCP+CR VD
Sbjct: 142 EECSVCLGEMRQGEAAKRLPVCLHVFHEECIDMWLGSHATCPICRSPVD 190
>Os09g0468300 Zinc finger, RING-type domain containing protein
Length = 392
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 60 AVASGLPAFMYDRLVRH-SGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWL 118
+V + P Y + H S KGA ECAVC+ ++LLP C+H++H DCID WL
Sbjct: 100 SVLATFPTMAYADVKAHKSVKGA--LECAVCISEFDDDETLRLLPKCSHVFHQDCIDTWL 157
Query: 119 SSHPTCPLCRC 129
+SH TCP+CR
Sbjct: 158 ASHATCPVCRA 168
>Os12g0432600 Zinc finger, RING-type domain containing protein
Length = 185
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 63 SGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHP 122
+PAF Y R G+ +CAVC+ + G V+ LPAC H +H C+D WL H
Sbjct: 104 EAIPAFEY----RRGSSGSGVAQCAVCIAAVKDGDTVRRLPACGHAFHAPCVDGWLRDHA 159
Query: 123 TCPLCRCRV 131
TCP+CR V
Sbjct: 160 TCPMCRADV 168
>Os05g0164200 Zinc finger, RING-type domain containing protein
Length = 178
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 48/86 (55%)
Query: 65 LPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTC 124
LP F + + + +CAVCLG + G + +LLPAC H++H +CID WL+ TC
Sbjct: 92 LPVFTWGSSSPATAAADAAVQCAVCLGEMEDGELGRLLPACRHVFHAECIDTWLAVSSTC 151
Query: 125 PLCRCRVDHPGQGQETARQLAQLSPA 150
P+CR V + A +A +SPA
Sbjct: 152 PVCRAAVGAAEDDEPAAAPVAGVSPA 177
>Os04g0590900 Similar to RING-H2 finger protein ATL1B
Length = 383
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 84 TECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRV 131
T+C+VCLG G ++LLP C+H +H CID WL SH CPLCR +
Sbjct: 155 TDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202
>Os02g0248320 Zinc finger, RING-type domain containing protein
Length = 222
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 86 CAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRV 131
CAVCL + G V+ LPAC H++H DC+D+WL SH TCPLCRC V
Sbjct: 144 CAVCLEDVARGETVRRLPACGHLFHRDCVDMWLHSHTTCPLCRCEV 189
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHP 134
+C+VCLG G +V+LLP C H +HV CID WL +H CPLCR V P
Sbjct: 201 DCSVCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVLGP 250
>AK064102
Length = 357
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 80 GASWT-ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHPGQGQ 138
G W +CAVCLG G +V+LLP C+H +H CID WL +H CPLCR V P
Sbjct: 150 GVGWGGDCAVCLGEFRDGELVRLLPRCSHPFHAPCIDTWLRAHVNCPLCRSPVVVPSDLP 209
Query: 139 ETARQ 143
TA +
Sbjct: 210 ATATE 214
>Os05g0360300
Length = 199
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 61 VASGLPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSS 120
+AS LP +Y +GK A+ ECAVC+ G + +LLP C H +H DC+ WL
Sbjct: 102 IASSLPVSVYSSADVGNGKAAA--ECAVCIVEFRDGDLARLLPRCGHRFHADCVGAWLRL 159
Query: 121 HPTCPLCR 128
H TCPLCR
Sbjct: 160 HSTCPLCR 167
>Os01g0213000 Zinc finger, RING-type domain containing protein
Length = 166
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRVDHPGQGQETARQ 143
ECAVCLG + G V+ LP C H +H C+D WL PTCPLCR V P + R+
Sbjct: 100 ECAVCLGAVEEGETVRALPCCPHAFHARCVDAWLRLRPTCPLCRADVPVPARPTAPRRR 158
>Os08g0445000 Similar to RING-H2 finger protein ATL5A
Length = 501
Score = 64.3 bits (155), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 65 LPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTC 124
LP F+Y +V K +CAVCL ++LLP C+H +HVDCID WL SH TC
Sbjct: 134 LPVFLYGAVVGAGRKDP--FDCAVCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTC 191
Query: 125 PLCR 128
PLCR
Sbjct: 192 PLCR 195
>Os02g0561900
Length = 205
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%)
Query: 65 LPAFMYDRLVRHSGKGASWTECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTC 124
LP +Y R + ECAVCL + G + L C H +H +C+D+WL SH TC
Sbjct: 100 LPVTVYSRAAAAAAAKEDGVECAVCLAKLEDGEEARFLRRCGHGFHAECVDMWLGSHSTC 159
Query: 125 PLCR 128
PLCR
Sbjct: 160 PLCR 163
>Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-)
Length = 325
Score = 63.2 bits (152), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCR 128
ECAVCL + G + LP C H +H +C+D+WL SH TCPLCR
Sbjct: 133 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 176
>Os03g0340100
Length = 200
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRV-----DHPGQGQ 138
ECAVC+G + G +LLP C H +H +C+D W SH TCPLCR V D G+G
Sbjct: 132 ECAVCIGELRDGDTGRLLPRCGHRFHAECVDKWFRSHATCPLCRAAVAAADGDSGGEGD 190
>Os02g0561400
Length = 314
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCR 128
ECAVCL + G + LP C H +H +C+D+WL SH TCPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0561000
Length = 314
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCR 128
ECAVCL + G + LP C H +H +C+D+WL SH TCPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0560600
Length = 314
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCR 128
ECAVCL + G + LP C H +H +C+D+WL SH TCPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os02g0560200
Length = 314
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 30/44 (68%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCR 128
ECAVCL + G + LP C H +H +C+D+WL SH TCPLCR
Sbjct: 122 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCR 165
>Os03g0398600 Zinc finger, RING-type domain containing protein
Length = 267
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 85 ECAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCRCRV 131
+CAVC+ + G ++LP C H +HV+C+D+WL S+ TCPLCRC V
Sbjct: 90 DCAVCITELAAGESARVLPRCGHGFHVECVDMWLRSNSTCPLCRCAV 136
>Os06g0534900 Zinc finger, RING-type domain containing protein
Length = 412
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 86 CAVCLGVIHVGAMVKLLPACAHIYHVDCIDLWLSSHPTCPLCR 128
CAVCL + G V+ LP+C H++HVDCID+WL +H TCPLCR
Sbjct: 148 CAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCR 190
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.328 0.137 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,653,068
Number of extensions: 155565
Number of successful extensions: 817
Number of sequences better than 1.0e-10: 81
Number of HSP's gapped: 845
Number of HSP's successfully gapped: 82
Length of query: 150
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 58
Effective length of database: 12,232,113
Effective search space: 709462554
Effective search space used: 709462554
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 151 (62.8 bits)