BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0559400 Os05g0559400|AK106181
(281 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0559400 Similar to IAA11 (Fragment) 395 e-110
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 271 3e-73
Os06g0335500 AUX/IAA protein family protein 200 1e-51
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 184 5e-47
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 175 4e-44
Os03g0742900 Aux /IAA protein 157 6e-39
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 153 1e-37
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 134 5e-32
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 134 9e-32
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 129 3e-30
Os07g0182400 AUX/IAA protein family protein 125 3e-29
Os06g0597000 Similar to Auxin responsive protein IAA-Re 125 3e-29
Os02g0817600 AUX/IAA protein family protein 124 5e-29
Os03g0633800 Similar to IAA6 (Fragment) 124 9e-29
Os03g0797800 AUX/IAA protein family protein 121 5e-28
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 105 4e-23
Os05g0523300 Similar to IAA8 (Fragment) 104 6e-23
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 102 2e-22
Os09g0527700 Similar to Auxin-induced protein IAA4 99 4e-21
Os08g0109400 AUX/IAA protein family protein 96 4e-20
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 92 3e-19
Os06g0355300 84 8e-17
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 84 1e-16
Os02g0723400 AUX/IAA protein family protein 77 1e-14
Os06g0166500 Similar to Auxin-responsive protein IAA20 (Ind... 70 1e-12
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/281 (73%), Positives = 207/281 (73%)
Query: 1 MPPPLEARDYIGLXXXXXXXXXXXXXXTPVAEVVGAHLALRLGLPGSESPXXXXXXXXXX 60
MPPPLEARDYIGL TPVAEVVGAHLALRLGLPGSESP
Sbjct: 1 MPPPLEARDYIGLAASPASSSSSCCASTPVAEVVGAHLALRLGLPGSESPARAEAEAVVV 60
Query: 61 XXXXXXXXXXXXXXXXXXXFVDSLDRSEGRRAAATXXXXXXXXXXXXXXXXXXXXXXXXX 120
FVDSLDRSEGRRAAAT
Sbjct: 61 DAALTLGPAPPPRGGAKRGFVDSLDRSEGRRAAATAGDDERGVREEEEEEKGLGEAAAGA 120
Query: 121 XXXXXXQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLK 180
QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLK
Sbjct: 121 PRAAKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLK 180
Query: 181 TYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADW 240
TYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADW
Sbjct: 181 TYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADW 240
Query: 241 MLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK 281
MLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK
Sbjct: 241 MLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK 281
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 271 bits (694), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 128/155 (82%), Positives = 144/155 (92%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
QVVGWPPVR+YRKNTLAASA+K KGED+G +E G YVKVSMDGAPYLRKVDLK YSSYE
Sbjct: 117 QVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYE 176
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDL 246
DLS+ALEKMFSCFITG+S K+S RDRLT+GS+ADAL+DQEYVLTYEDKDADWMLVGDL
Sbjct: 177 DLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDL 236
Query: 247 PWDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK 281
PWDLFTT CRKL+IMRGSDAAG+APRS+EQ+GQ++
Sbjct: 237 PWDLFTTICRKLKIMRGSDAAGIAPRSIEQSGQSR 271
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/154 (62%), Positives = 116/154 (75%), Gaps = 4/154 (2%)
Query: 128 VVGWPPVRSYRKNTLAASATKTKGEDQGKSE----VGCCYVKVSMDGAPYLRKVDLKTYS 183
VVGWPP+RSYRKNT+A S KG+D G+++ GC YVKVSMDGAPYLRKVDLK Y
Sbjct: 109 VVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYK 168
Query: 184 SYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLV 243
+Y++LSLALEKMFSCF G S+ S RD L+D D E VLTYEDKD DWMLV
Sbjct: 169 NYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLV 228
Query: 244 GDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQT 277
GD+PW +FT SCR+LRIM+GSDA G+APR+ +++
Sbjct: 229 GDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKS 262
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 184 bits (468), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/151 (60%), Positives = 109/151 (72%), Gaps = 16/151 (10%)
Query: 128 VVGWPPVRSYRKNTLAASATKTKGED-QGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
VVGWPP+RSYRKNT+A + K+ ED K G YVKVSMDGAPYLRKVDLKTY +Y+
Sbjct: 124 VVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYK 183
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDL 246
D+SL LEKMF F TG+ A+ KD EYVLTYEDKD DWMLVGD+
Sbjct: 184 DMSLGLEKMFIGFSTGKEG---------------AENQKDGEYVLTYEDKDGDWMLVGDV 228
Query: 247 PWDLFTTSCRKLRIMRGSDAAGMAPRSLEQT 277
PW++FT SCR+LRIM+GSDA G+APR+ E++
Sbjct: 229 PWEMFTDSCRRLRIMKGSDAIGLAPRAGEKS 259
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/156 (57%), Positives = 107/156 (68%), Gaps = 9/156 (5%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTK------GEDQGKSEVGCCYVKVSMDGAPYLRKVDLK 180
QVVGWPPVRSYRKN LA A K K G+ G +VKVSMDGAPYLRKVDLK
Sbjct: 120 QVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLK 179
Query: 181 TYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADW 240
Y SY +LS ALEKMFS F G SH + + + AD L EYV TYEDKD DW
Sbjct: 180 MYKSYLELSKALEKMFSSFTIGNCGSHGV---NGMNESKIADLLNGSEYVPTYEDKDGDW 236
Query: 241 MLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQ 276
MLVGD+PW++F SC++LRIM+GS+A G+APR++E+
Sbjct: 237 MLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEK 272
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 103/158 (65%), Gaps = 26/158 (16%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEV-----------GCCYVKVSMDGAPYLR 175
Q VGWPPVRS+R+N + + K+K E++ + +VKVSMDGAPYLR
Sbjct: 86 QAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLR 145
Query: 176 KVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYED 235
KVDLK Y+SY+DLSLAL+KMF F T+ + + + + +DA V TYED
Sbjct: 146 KVDLKMYNSYKDLSLALQKMFGTF---------TATGNNMNEVNGSDA------VTTYED 190
Query: 236 KDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRS 273
KD DWMLVGD+PW +F SC++LRIM+GS+A G+APR+
Sbjct: 191 KDGDWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPRA 228
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 93/144 (64%), Gaps = 21/144 (14%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
QVVGWPPVRS+RKN LA VKVSMDGAPYLRK+D+ Y SY
Sbjct: 100 QVVGWPPVRSFRKNVLAEKCK------------AAALVKVSMDGAPYLRKIDVAMYKSYP 147
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKR-DRLTDGSRADALKDQEYVLTYEDKDADWMLVGD 245
+LS+A + MF+ F G+ SH+ K ++L D D EYV TYEDKD DWMLVGD
Sbjct: 148 ELSMAFQNMFTSFTIGKCGSHQQLKESNKLRD--------DLEYVPTYEDKDGDWMLVGD 199
Query: 246 LPWDLFTTSCRKLRIMRGSDAAGM 269
+PW++F SC++LRIM+GS+A G+
Sbjct: 200 VPWEMFVESCKRLRIMKGSEAIGL 223
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 134 bits (338), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 91/151 (60%), Gaps = 29/151 (19%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
+VVGWPPVRS+RKN LAA +VKV++DGAPYLRKVDL+ YS Y+
Sbjct: 76 RVVGWPPVRSFRKNALAAK-----------------FVKVAVDGAPYLRKVDLEAYSGYD 118
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSR--ADALKDQEYVLTYEDKDADWMLVG 244
L AL+ F T R + D R DA+ EYV TYEDKD DWMLVG
Sbjct: 119 QLLRALQDKFFSHFTIR----------KFADDERKLVDAVNGTEYVPTYEDKDGDWMLVG 168
Query: 245 DLPWDLFTTSCRKLRIMRGSDAAGMAPRSLE 275
D+PW +F +C++LR+M+ S+A +APR+ +
Sbjct: 169 DVPWKMFVETCQRLRLMKSSEAVNLAPRAAQ 199
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 134 bits (336), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 94/157 (59%), Gaps = 29/157 (18%)
Query: 127 QVVGWPPVRSYRKNTL---------AASATKTKGEDQGKSEV---GCCYVKVSMDGAPYL 174
QVVGWPPVRSYRK+ L E Q K +V G +VKVSMDGAPYL
Sbjct: 53 QVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYL 112
Query: 175 RKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRAD-ALKDQEYVLTY 233
RK+DLK Y Y +L ALE MF CF + G+ AD A+ ++ +TY
Sbjct: 113 RKIDLKVYKGYRELREALEAMFLCF----------------SGGAAADAAVNPSDFAVTY 156
Query: 234 EDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMA 270
EDKD D MLVGD+P+++F ++C++LRIM+GS+A G+
Sbjct: 157 EDKDGDLMLVGDVPFEMFISTCKRLRIMKGSEARGLG 193
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 92/147 (62%), Gaps = 16/147 (10%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
+VVGWPPVR++RKN LAA A + + +VKV++DGAPYLRKVDL+ Y Y+
Sbjct: 81 RVVGWPPVRAFRKNALAALAAASSSK--------AKFVKVAVDGAPYLRKVDLEAYRGYD 132
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDL 246
L AL+ F T R ++ K DA+ EYV TYEDKD DWMLVGD+
Sbjct: 133 QLLAALQDKFFSHFTIRKLGNEEMKL--------VDAVSGNEYVPTYEDKDGDWMLVGDV 184
Query: 247 PWDLFTTSCRKLRIMRGSDAAGMAPRS 273
PW +F +C++LR+M+ S+A +APRS
Sbjct: 185 PWKMFVETCQRLRLMKSSEAVNLAPRS 211
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/148 (45%), Positives = 87/148 (58%), Gaps = 25/148 (16%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGC-------CYVKVSMDGAPYLRKVDL 179
QVVGWPPVR+YR+NT +A +G E YVKVSMDGAPYLRKVDL
Sbjct: 88 QVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDL 147
Query: 180 KTYSSYEDLSLALEKMFS-CFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDA 238
K Y +L AL+ +F+ CF + +D D ++ + YEDKD
Sbjct: 148 KMCKGYRELREALDLLFTKCF-----------------SATASDGCSDGQFAIAYEDKDG 190
Query: 239 DWMLVGDLPWDLFTTSCRKLRIMRGSDA 266
D MLVGD+PW++F +SC+KLRIM+GS+A
Sbjct: 191 DLMLVGDVPWEMFISSCKKLRIMKGSEA 218
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 89/146 (60%), Gaps = 17/146 (11%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
+ VGWPPVR+YR+N L ED ++++ VKV++DGAPYLRKVDL ++ Y
Sbjct: 61 RAVGWPPVRAYRRNALR--------EDSARAKL----VKVAVDGAPYLRKVDLAAHAGYA 108
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDL 246
L AL MF+ + R + +L D + EYV TYEDKD DWMLVGD+
Sbjct: 109 PLLRALHGMFASCLAVRGGGGGDGEGTKLVD-----LVTGAEYVPTYEDKDGDWMLVGDV 163
Query: 247 PWDLFTTSCRKLRIMRGSDAAGMAPR 272
PW +F SC+++R+M+ S+A ++PR
Sbjct: 164 PWKMFVESCKRIRLMKSSEAVNLSPR 189
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 124 bits (312), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 94/166 (56%), Gaps = 32/166 (19%)
Query: 128 VVGWPPVRSYRKNTLAASAT---------------------KTKGEDQGKSEVGCCYVKV 166
VVGWPP+R +R N+L A K +GE +G+ +VKV
Sbjct: 111 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRV---AGWVKV 167
Query: 167 SMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKD 226
+MDG RKVDL + SY+ L+LALE MF+ G +SH T+ +L D S
Sbjct: 168 NMDGEVIGRKVDLNAHRSYKTLALALELMFTKPSIGLCASHNTNSL-KLLDNS------- 219
Query: 227 QEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPR 272
EY LTYED+D DWMLVGD+PW++F +S ++LRIMR SDA G+ R
Sbjct: 220 AEYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 265
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 94/174 (54%), Gaps = 43/174 (24%)
Query: 127 QVVGWPPVRSYRKNTL------------AASATKTKGEDQGKSEV------------GCC 162
QVVGWPPVRSYRK+ A S+ K E K+ G
Sbjct: 70 QVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANGGS 129
Query: 163 YVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRAD 222
VKVSMDGAPYLRK+DL+ Y Y +L ALE MF CF AD
Sbjct: 130 LVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFVCF------------------SGAAD 171
Query: 223 ALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGM-APRSLE 275
E+ +TY+DKD D MLVGD+P+D+FT++C+KLRIM+ S+A G+ +PR ++
Sbjct: 172 GANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQMK 225
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 89/150 (59%), Gaps = 29/150 (19%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGE---------DQG-KSEVGCCYVKVSMDGAPYLRK 176
QVVGWPPV SYR++T +S++ T DQG K++ G YVKVSMDGAPYLRK
Sbjct: 66 QVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRK 125
Query: 177 VDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDK 236
VDL+ Y Y +L AL+ +F CF S+S + YEDK
Sbjct: 126 VDLRMYGGYRELRDALDALFGCFSADASASAAHFA-------------------VAYEDK 166
Query: 237 DADWMLVGDLPWDLFTTSCRKLRIMRGSDA 266
D D ML GD+PWD+F +SC+KLRIMRGS+A
Sbjct: 167 DGDLMLAGDVPWDMFISSCKKLRIMRGSEA 196
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 91/154 (59%), Gaps = 25/154 (16%)
Query: 128 VVGWPPVRSYRKNTLAASATKT----KGEDQGKSE--VGCCYVKVSMDGAPYLRKVDLKT 181
VVGWPPVR++R+N LA S+ + G+ K+E ++K++MDG P RK+DL
Sbjct: 139 VVGWPPVRTFRRN-LATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKIDLNA 197
Query: 182 YSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKD----------QEYVL 231
+ SYE LSLA++K+F + ++RD LT G++ +D EY L
Sbjct: 198 FDSYEKLSLAVDKLFRGLLA--------AQRDPLTAGAKDCQQEDVAISGLLDGTGEYTL 249
Query: 232 TYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSD 265
YED + D +LVGD+PW +F +S ++LR+++ SD
Sbjct: 250 VYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 24/155 (15%)
Query: 128 VVGWPPVRSYRKNTLAASATKTKGEDQG-----KSEVGC---CYVKVSMDGAPYLRKVDL 179
VVGWPP+RS+R+N S+ K E Q K++ C VK++MDG P RKVDL
Sbjct: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
Query: 180 KTYSSYEDLSLALEKMFSCFITGR-----SSSHKTSKRDR----LTDGSRADALKDQEYV 230
+ Y SY+ LS A+E++F F+ + + S + D+ L DG+ Y
Sbjct: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGV-------YT 280
Query: 231 LTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSD 265
L YED D D ML GD+PW +F ++ ++LR+MR S+
Sbjct: 281 LVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 86/148 (58%), Gaps = 10/148 (6%)
Query: 128 VVGWPPVRSYRKNTLAASATKTKGEDQG-----KSEVGCC---YVKVSMDGAPYLRKVDL 179
VVGWPP+RS+R+N ++S++K E Q K + C VK++MDG P RK+DL
Sbjct: 176 VVGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDL 235
Query: 180 KTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQ--EYVLTYEDKD 237
Y+SY+ LS A++++F F+ + + D L D EY L YED +
Sbjct: 236 AAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSE 295
Query: 238 ADWMLVGDLPWDLFTTSCRKLRIMRGSD 265
D MLVGD+PW +F ++ ++LR++R S+
Sbjct: 296 GDRMLVGDVPWKVFVSTAKRLRVLRSSE 323
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 66/111 (59%), Gaps = 17/111 (15%)
Query: 163 YVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRAD 222
+VKVSMDG PYLRKVD+ Y Y +L AL MF C G L DG
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFYCSTIG------------LMDG---- 90
Query: 223 ALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRS 273
+ E+ + YED D DWMLVGD+PW++F +SC+++R+MR +A G++ +
Sbjct: 91 -YGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLSSNA 140
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 30/154 (19%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCC--------------------YVKV 166
Q+VGWPPVR++RKN S K D ++V C +VKV
Sbjct: 92 QLVGWPPVRAFRKNL---STPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKV 148
Query: 167 SMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKD 226
+++G RK+DLK + SY+ LS AL+ MF F++ ++ + ++ ++ +GS+
Sbjct: 149 NLEGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIAT-RDNELQQMEEGSK------ 201
Query: 227 QEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRI 260
+ YVL YED + D MLVGD+PW+LF S ++L I
Sbjct: 202 KRYVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 81/150 (54%), Gaps = 20/150 (13%)
Query: 131 WPPVRSYRKNTLAASATKT---------------KGEDQGKSEVGCCYVKVSMDGAPYLR 175
WPPVRS+R+N ++S++ + K G +E G +VK++MDG P R
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGM-FVKINMDGVPIGR 132
Query: 176 KVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYED 235
KVDL Y Y LS A++K+F + +S++ + + + EY L YED
Sbjct: 133 KVDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEA----DAAAAGEMVGGGEYTLVYED 188
Query: 236 KDADWMLVGDLPWDLFTTSCRKLRIMRGSD 265
+ D MLVGD+PW +F + ++LR+++ SD
Sbjct: 189 DEGDRMLVGDVPWQMFIATAKRLRVLKSSD 218
>Os06g0355300
Length = 149
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 24/140 (17%)
Query: 127 QVVGWPPVRSYRKNT----------LAASATKTKGEDQGKSEVG-------CCYVKVSMD 169
Q+VGWPPVR++RKN L E G + +VKV+++
Sbjct: 12 QLVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLE 71
Query: 170 GAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEY 229
G RK+DLK + SY+ LS AL+ MF F++ ++ + ++ R+ +GS+ + Y
Sbjct: 72 GYAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIAT-RDNELQRMEEGSK------KRY 124
Query: 230 VLTYEDKDADWMLVGDLPWD 249
VL YED + D MLVGD+PW+
Sbjct: 125 VLVYEDNEGDRMLVGDVPWE 144
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 28/134 (20%)
Query: 128 VVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYED 187
VVGWPPV S R+ A+ YVKV +G RKVDL +SSY++
Sbjct: 76 VVGWPPVSSARRACGGAN-----------------YVKVKKEGDAIGRKVDLALHSSYDE 118
Query: 188 LSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLP 247
L+ L +MF ++ H+ K+ + + DA V+TYED D DWMLVGD+P
Sbjct: 119 LAATLARMFP------TNDHQGEKK--MANDDHGDAAGP---VVTYEDGDGDWMLVGDVP 167
Query: 248 WDLFTTSCRKLRIM 261
WD F S ++L+I+
Sbjct: 168 WDDFARSVKRLKIL 181
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 163 YVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRAD 222
+VKV M+G P RK+DL Y+ L L MF IT + R G + +
Sbjct: 105 FVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASIT-----YHHCHRQFAVVGMKTN 159
Query: 223 ALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSD 265
+ +VLTYED++ DWM+ GD+PW+LF TS ++LRI R D
Sbjct: 160 KV---HHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>Os06g0166500 Similar to Auxin-responsive protein IAA20 (Indoleacetic
acid-induced protein 20)
Length = 183
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 59/135 (43%), Gaps = 30/135 (22%)
Query: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
++VGWPPV+ + YVKV M+G RK+DL SY
Sbjct: 78 KLVGWPPVKCLHRRRDGGCGGG--------------YVKVKMEGLAIGRKLDLSILGSYA 123
Query: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDL 246
+L L MF T + H +R Y +TYED + DWM VGD+
Sbjct: 124 ELLDTLHLMFPS--TNQEDGHDRRRR--------------HPYAVTYEDGEGDWMQVGDV 167
Query: 247 PWDLFTTSCRKLRIM 261
PW+ F S ++L+I+
Sbjct: 168 PWEAFAKSVKRLKIL 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,124,529
Number of extensions: 219851
Number of successful extensions: 652
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 609
Number of HSP's successfully gapped: 26
Length of query: 281
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 181
Effective length of database: 11,814,401
Effective search space: 2138406581
Effective search space used: 2138406581
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 155 (64.3 bits)