BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0523300 Os05g0523300|AK071192
(327 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0523300 Similar to IAA8 (Fragment) 563 e-161
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 285 4e-77
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 184 1e-46
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 130 2e-30
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 112 3e-25
Os02g0817600 AUX/IAA protein family protein 110 2e-24
Os06g0335500 AUX/IAA protein family protein 107 9e-24
Os03g0742900 Aux /IAA protein 107 1e-23
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 105 5e-23
Os08g0109400 AUX/IAA protein family protein 105 5e-23
Os05g0559400 Similar to IAA11 (Fragment) 104 7e-23
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 104 1e-22
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 103 2e-22
Os07g0182400 AUX/IAA protein family protein 96 4e-20
Os06g0355300 94 1e-19
Os03g0633800 Similar to IAA6 (Fragment) 94 2e-19
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 91 9e-19
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 89 4e-18
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 89 6e-18
Os06g0597000 Similar to Auxin responsive protein IAA-Re 86 4e-17
Os03g0797800 AUX/IAA protein family protein 84 2e-16
Os09g0527700 Similar to Auxin-induced protein IAA4 80 2e-15
Os02g0723400 AUX/IAA protein family protein 75 5e-14
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 70 2e-12
Os11g0221300 AUX/IAA protein family protein 65 5e-11
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 563 bits (1451), Expect = e-161, Method: Compositional matrix adjust.
Identities = 280/327 (85%), Positives = 280/327 (85%)
Query: 1 MEEEFKDKGLPPTLLHLIPDGREWKVKEADGEGSRNTNXXXXXXXXXXXXXXXPGVQQEE 60
MEEEFKDKGLPPTLLHLIPDGREWKVKEADGEGSRNTN PGVQQEE
Sbjct: 1 MEEEFKDKGLPPTLLHLIPDGREWKVKEADGEGSRNTNLDADEDKELELKLGLPGVQQEE 60
Query: 61 RAADXXXXXXXXXXXXXXXXXXGCFPTHSKPTTSIGTTGAKRGFFAIVGATLEGYNQSHR 120
RAAD GCFPTHSKPTTSIGTTGAKRGFFAIVGATLEGYNQSHR
Sbjct: 61 RAADSREKIQQQQRESSSEPSIGCFPTHSKPTTSIGTTGAKRGFFAIVGATLEGYNQSHR 120
Query: 121 DTEECGKELTLGDENMAGERKKGXXXXXXXXXXXXXXNPQGRGAIPPVVGWPPIRSFRRN 180
DTEECGKELTLGDENMAGERKKG NPQGRGAIPPVVGWPPIRSFRRN
Sbjct: 121 DTEECGKELTLGDENMAGERKKGCCPSPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRN 180
Query: 181 LTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAV 240
LTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAV
Sbjct: 181 LTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAV 240
Query: 241 EELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKV 300
EELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKV
Sbjct: 241 EELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKV 300
Query: 301 FVSTVKRLRVMRRSELPHDMIGADPVK 327
FVSTVKRLRVMRRSELPHDMIGADPVK
Sbjct: 301 FVSTVKRLRVMRRSELPHDMIGADPVK 327
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 176/335 (52%), Positives = 205/335 (61%), Gaps = 16/335 (4%)
Query: 1 MEE-EFKDKGLPPTLLHLIPDGREWKVKEADGEG-SRNTNXXXXXXXXXXXXXXXPGVQQ 58
MEE K +GLPP LL LIPD +EWK++EA G G SRN PG +
Sbjct: 1 MEEGSNKREGLPPQLLDLIPDEKEWKLREALGLGRSRNAGFDGEEDKKLDLKLGLPGFIE 60
Query: 59 EERAADXXXXXXXXXXXXXXXXXXGCFPTHSKPTTSIGTT-GAKRGFFAIVGATLEGYN- 116
++ A FP HSK T+S TT GAKRGF V EGYN
Sbjct: 61 DDEA---ETLRDYRLQQESPSLSLSFFPKHSKTTSSTTTTTGAKRGFIDTVEDKTEGYND 117
Query: 117 QSHRDTEECGKELTLGDENMAG--ERKKG------XXXXXXXXXXXXXXNPQGRGAIPPV 168
Q + CGKEL + +E +A ERKKG QGRGA PV
Sbjct: 118 QKQQARAGCGKELAV-EEMIAAVSERKKGCCPPPPPPHGAPATPARNRPQTQGRGAAAPV 176
Query: 169 VGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQ 228
VGWPPIRSFRRNL + SS K SPE QND A+ K CKK PLVKINMDGIPIGRK+DL
Sbjct: 177 VGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLA 236
Query: 229 IYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDG 288
Y+SY LSSAV++LF GFL+AQKD + A+ +QGA+DKIF LLDG+G YTLVYED++G
Sbjct: 237 AYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEG 296
Query: 289 DRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGA 323
DRML GD+PWKVFVST KRLRV+R SEL H +IGA
Sbjct: 297 DRMLVGDVPWKVFVSTAKRLRVLRSSELSHTLIGA 331
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 118/162 (72%), Gaps = 3/162 (1%)
Query: 160 QGRGAIPPVVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGI 219
Q R PVVGWPP+R+FRRNL +S K S E QN + KA+ I K+ P +KINMDG+
Sbjct: 131 QTRSPSTPVVGWPPVRTFRRNLA--TSSKASLELQNGKKAAKAEEI-KRAPFIKINMDGV 187
Query: 220 PIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVY 279
PIGRK+DL +DSY+KLS AV++LFRG L AQ+D A + + ED SGLLDGTG Y
Sbjct: 188 PIGRKIDLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEY 247
Query: 280 TLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMI 321
TLVYED +GD++L GD+PW +FVS+VKRLRV++ S+L +I
Sbjct: 248 TLVYEDYEGDKVLVGDVPWGMFVSSVKRLRVLKTSDLSSSLI 289
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 97/153 (63%), Gaps = 12/153 (7%)
Query: 171 WPPIRSFRRNLTNGSSFKQSPERQNDEAD----DKAKPI--CKKRPLVKINMDGIPIGRK 224
WPP+RSFRRNL + SS + DKA +K VKINMDG+PIGRK
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
Query: 225 VDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYE 284
VDL Y Y +LS+AV++LFRG L AQ + E+ A + + G G YTLVYE
Sbjct: 134 VDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMV------GGGEYTLVYE 187
Query: 285 DNDGDRMLAGDIPWKVFVSTVKRLRVMRRSELP 317
D++GDRML GD+PW++F++T KRLRV++ S+LP
Sbjct: 188 DDEGDRMLVGDVPWQMFIATAKRLRVLKSSDLP 220
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/151 (40%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRP---LVKINMDGIPIGRK 224
VVGWPP+RS+R+N+ ++ D AD VK++MDG P RK
Sbjct: 121 VVGWPPVRSYRKNI-----LAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRK 175
Query: 225 VDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYE 284
VDL++Y SY +LS A+E++F F +C G G + + LL+G+ Y YE
Sbjct: 176 VDLKMYKSYLELSKALEKMFSSFTIG----NCGSHGVNGMNESKIADLLNGSE-YVPTYE 230
Query: 285 DNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
D DGD ML GD+PW++FV + KRLR+M+ SE
Sbjct: 231 DKDGDWMLVGDVPWEMFVESCKRLRIMKGSE 261
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 20/158 (12%)
Query: 168 VVGWPPIRSFRRNL--------TNGSSFKQSPERQNDEADDKAKPICKKRP--LVKINMD 217
VVGWPPIR FR N T+ + K++ ++D DK + K R VK+NMD
Sbjct: 111 VVGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMD 170
Query: 218 GIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTG 277
G IGRKVDL + SY+ L+ A+E +F + G + + LLD +
Sbjct: 171 GEVIGRKVDLNAHRSYKTLALALELMF----------TKPSIGLCASHNTNSLKLLDNSA 220
Query: 278 VYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
Y L YED DGD ML GD+PW++FVS+VKRLR+MR S+
Sbjct: 221 EYQLTYEDRDGDWMLVGDVPWEMFVSSVKRLRIMRTSD 258
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 14/160 (8%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPI--CKKRPLVKINMDGIPIGRKV 225
VVGWPPIRS+R+N + Q + D+ + K P C VK++MDG P RKV
Sbjct: 109 VVGWPPIRSYRKNTM---AMSQPALKGKDDGEAKQAPASGCL---YVKVSMDGAPYLRKV 162
Query: 226 DLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYED 285
DL++Y +Y++LS A+E++F F + S +SG G D L +GT + L YED
Sbjct: 163 DLKMYKNYKELSLALEKMFSCFTVGHGE-SNGKSGRDGLSDCRLMDLKNGTEL-VLTYED 220
Query: 286 NDGDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325
D D ML GD+PW++F + +RLR+M+ S D +G P
Sbjct: 221 KDEDWMLVGDVPWRMFTDSCRRLRIMKGS----DAVGLAP 256
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 83/150 (55%), Gaps = 20/150 (13%)
Query: 169 VGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPIC---KKRPLVKINMDGIPIGRKV 225
VGWPP+RSFRRN+ S K E + D+ + VK++MDG P RKV
Sbjct: 88 VGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPYLRKV 147
Query: 226 DLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYED 285
DL++Y+SY+ LS A++++F F +++ E D + + YED
Sbjct: 148 DLKMYNSYKDLSLALQKMFGTFTATGNNMN-----EVNGSDAVTT------------YED 190
Query: 286 NDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
DGD ML GD+PW++FV + KRLR+M+ SE
Sbjct: 191 KDGDWMLVGDVPWQMFVESCKRLRIMKGSE 220
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 10/148 (6%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPP+R++R+N S+ K E D+ + P+ VK++MDG P RKVDL
Sbjct: 118 VVGWPPVRNYRKNTLAASASKGKGE---DKGTAEGGPL-----YVKVSMDGAPYLRKVDL 169
Query: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDND 287
++Y SY+ LS A+E++F F+ Q L + + ++ L D Y L YED D
Sbjct: 170 KMYSSYEDLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQE--YVLTYEDKD 227
Query: 288 GDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
D ML GD+PW +F + ++L++MR S+
Sbjct: 228 ADWMLVGDLPWDLFTTICRKLKIMRGSD 255
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 90/155 (58%), Gaps = 24/155 (15%)
Query: 168 VVGWPPIRSFRRNLT-----NGSSFKQSPERQNDEADDKAKPICKKRP----LVKINMDG 218
+VGWPP+R+FR+NL+ + + +DE ++R VK+N++G
Sbjct: 93 LVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNLEG 152
Query: 219 IPIGRKVDLQIYDSYQKLSSAVEELFRGFLE---AQKDLSCAESGEQGAEDKIFSGLLDG 275
+GRK+DL+ + SY LS A++ +F GFL A +D + E+G++ +
Sbjct: 153 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRDNELQQM-EEGSKKR-------- 203
Query: 276 TGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRV 310
Y LVYEDN+GDRML GD+PW++F+++VKRL +
Sbjct: 204 ---YVLVYEDNEGDRMLVGDVPWELFIASVKRLYI 235
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/155 (38%), Positives = 87/155 (56%), Gaps = 24/155 (15%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPP+RS+R+N S+ K E Q K++ C VK++MDG P RKVDL
Sbjct: 128 VVGWPPVRSYRKNTLAASATKTKGEDQG-----KSEVGCC---YVKVSMDGAPYLRKVDL 179
Query: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGV-------YT 280
+ Y SY+ LS A+E++F F+ + + S + D+ L DG+ Y
Sbjct: 180 KTYSSYEDLSLALEKMFSCFITGR-----SSSHKTSKRDR----LTDGSRADALKDQEYV 230
Query: 281 LVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
L YED D D ML GD+PW +F ++ ++LR+MR S+
Sbjct: 231 LTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSD 265
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 28/158 (17%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPPIRS+R+N + K + E + D K + VK++MDG P RKVDL
Sbjct: 124 VVGWPPIRSYRKNTMATNQIKSNKE----DVDAKQ---GQGFLYVKVSMDGAPYLRKVDL 176
Query: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDND 287
+ Y +Y+ +S +E++F GF +G++GAE++ G Y L YED D
Sbjct: 177 KTYKNYKDMSLGLEKMFIGF----------STGKEGAENQ-------KDGEYVLTYEDKD 219
Query: 288 GDRMLAGDIPWKVFVSTVKRLRVMRRSELPHDMIGADP 325
GD ML GD+PW++F + +RLR+M+ S D IG P
Sbjct: 220 GDWMLVGDVPWEMFTDSCRRLRIMKGS----DAIGLAP 253
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 77/148 (52%), Gaps = 29/148 (19%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPP+RSFR+N+ CK LVK++MDG P RK+D+
Sbjct: 101 VVGWPPVRSFRKNVLAEK--------------------CKAAALVKVSMDGAPYLRKIDV 140
Query: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDND 287
+Y SY +LS A + +F F + C + +K+ L Y YED D
Sbjct: 141 AMYKSYPELSMAFQNMFTSFTIGK----CGSHQQLKESNKLRDDL-----EYVPTYEDKD 191
Query: 288 GDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
GD ML GD+PW++FV + KRLR+M+ SE
Sbjct: 192 GDWMLVGDVPWEMFVESCKRLRIMKGSE 219
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 84/149 (56%), Gaps = 21/149 (14%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPL-VKINMDGIPIGRKVD 226
VVGWPP+R++RRN + ++ + ++ D+K K + L VK++MDG P RKVD
Sbjct: 89 VVGWPPVRAYRRNTFHQAAAAAAATKKG--GDEKQKQQQQGGGLYVKVSMDGAPYLRKVD 146
Query: 227 LQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDN 286
L++ Y++L A++ LF A C++ G + + YED
Sbjct: 147 LKMCKGYRELREALDLLFTKCFSATASDGCSD------------------GQFAIAYEDK 188
Query: 287 DGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
DGD ML GD+PW++F+S+ K+LR+M+ SE
Sbjct: 189 DGDLMLVGDVPWEMFISSCKKLRIMKGSE 217
>Os06g0355300
Length = 149
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 82/144 (56%), Gaps = 24/144 (16%)
Query: 168 VVGWPPIRSFRRNLT-----NGSSFKQSPERQNDEADDKAKPICKKRP----LVKINMDG 218
+VGWPP+R+FR+NL+ + + +DE ++RP VK+N++G
Sbjct: 13 LVGWPPVRTFRKNLSTPKPADADDLMNKMKPCSDEGHGSRDAAQERRPSSTMFVKVNLEG 72
Query: 219 IPIGRKVDLQIYDSYQKLSSAVEELFRGFLE---AQKDLSCAESGEQGAEDKIFSGLLDG 275
+GRK+DL+ + SY LS A++ +F GFL A +D + + E+G++ +
Sbjct: 73 YAVGRKIDLKAHRSYDSLSQALQSMFHGFLSDGIATRD-NELQRMEEGSKKR-------- 123
Query: 276 TGVYTLVYEDNDGDRMLAGDIPWK 299
Y LVYEDN+GDRML GD+PW+
Sbjct: 124 ---YVLVYEDNEGDRMLVGDVPWE 144
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 87/180 (48%), Gaps = 55/180 (30%)
Query: 164 AIPPV-----VGWPPIRSFRRNLTNGSSFKQSPERQNDE------ADDKAKPICKKR--- 209
A PPV VGWPP+RS+R+ S F+Q + ++K +PI K
Sbjct: 62 AAPPVAKAQVVGWPPVRSYRK-----SCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPA 116
Query: 210 ------------PLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCA 257
LVK++MDG P RK+DL++Y Y++L A+E +F
Sbjct: 117 PAASSAAAANGGSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMF------------- 163
Query: 258 ESGEQGAEDKIFSGLLDGTGV--YTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
FSG DG + + Y+D DGD ML GD+P+ +F ST K+LR+M+RSE
Sbjct: 164 ---------VCFSGAADGANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSE 214
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 21/152 (13%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQND----EADDKAKPICKKRPLVKINMDGIPIGR 223
VVGWPP+RS+R++ ++ + E K VK++MDG P R
Sbjct: 54 VVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYLR 113
Query: 224 KVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVY 283
K+DL++Y Y++L A+E +F F SG A+ + + + Y
Sbjct: 114 KIDLKVYKGYRELREALEAMFLCF-----------SGGAAADAAV------NPSDFAVTY 156
Query: 284 EDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
ED DGD ML GD+P+++F+ST KRLR+M+ SE
Sbjct: 157 EDKDGDLMLVGDVPFEMFISTCKRLRIMKGSE 188
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 73/154 (47%), Gaps = 47/154 (30%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPP+RSFR+N VK+ +DG P RKVDL
Sbjct: 77 VVGWPPVRSFRKNALAAK-------------------------FVKVAVDGAPYLRKVDL 111
Query: 228 QIYDSYQKLSSAVEELF------RGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTL 281
+ Y Y +L A+++ F R F + ++ L A +G + Y
Sbjct: 112 EAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTE----------------YVP 155
Query: 282 VYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
YED DGD ML GD+PWK+FV T +RLR+M+ SE
Sbjct: 156 TYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSE 189
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 26/148 (17%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPP+R+FR+N + S + + VK+ +DG P RKVDL
Sbjct: 82 VVGWPPVRAFRKNALAALAAASSSKAK----------------FVKVAVDGAPYLRKVDL 125
Query: 228 QIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDND 287
+ Y Y +L +A+++ F +K G E+ + G Y YED D
Sbjct: 126 EAYRGYDQLLAALQDKFFSHFTIRK---------LGNEEMKLVDAVSGNE-YVPTYEDKD 175
Query: 288 GDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
GD ML GD+PWK+FV T +RLR+M+ SE
Sbjct: 176 GDWMLVGDVPWKMFVETCQRLRLMKSSE 203
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 78/160 (48%), Gaps = 36/160 (22%)
Query: 158 NPQGRGAIPPVVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMD 217
+P+ R VGWPP+R++RRN + D A K LVK+ +D
Sbjct: 57 SPKARA-----VGWPPVRAYRRNAL-----------REDSARAK---------LVKVAVD 91
Query: 218 GIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLD-GT 276
G P RKVDL + Y L A+ +F SC G D + L+D T
Sbjct: 92 GAPYLRKVDLAAHAGYAPLLRALHGMF---------ASCLAVRGGGGGDGEGTKLVDLVT 142
Query: 277 GV-YTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
G Y YED DGD ML GD+PWK+FV + KR+R+M+ SE
Sbjct: 143 GAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSE 182
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 75/150 (50%), Gaps = 23/150 (15%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEA--DDKAKPICKKRPLVKINMDGIPIGRKV 225
VVGWPP+ S+RR+ SS + + D+ + VK++MDG P RKV
Sbjct: 67 VVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAPYLRKV 126
Query: 226 DLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYED 285
DL++Y Y++L A++ LF F + + YED
Sbjct: 127 DLRMYGGYRELRDALDALFGCFSADASASAAHF---------------------AVAYED 165
Query: 286 NDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
DGD MLAGD+PW +F+S+ K+LR+MR SE
Sbjct: 166 KDGDLMLAGDVPWDMFISSCKKLRIMRGSE 195
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 211 LVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFS 270
VK++MDG P RKVD+ Y Y +L A+ ++F C+ G
Sbjct: 47 FVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMFY----------CSTIG---------- 86
Query: 271 GLLDGTGVY--TLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
L+DG G + +VYED DGD ML GD+PW++FVS+ KR+RVMR E
Sbjct: 87 -LMDGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACE 132
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 58/102 (56%), Gaps = 10/102 (9%)
Query: 211 LVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFS 270
VK+ M+G+PIGRK+DL D Y+ L + + +FR + Q A
Sbjct: 105 FVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYH------HCHRQFA----VV 154
Query: 271 GLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMR 312
G+ + L YED +GD M+AGD+PW++F+++VKRLR+ R
Sbjct: 155 GMKTNKVHHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIAR 196
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 40/145 (27%)
Query: 168 VVGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDL 227
VVGWPP+ S RR C VK+ +G IGRKVDL
Sbjct: 76 VVGWPPVSSARR-------------------------ACGGANYVKVKKEGDAIGRKVDL 110
Query: 228 QIYDSYQKLSSAVEELF-RGFLEAQKDLSCAESGEQGAEDKIFSGLLDGTGVYTLVYEDN 286
++ SY +L++ + +F + +K ++ + G+ + YED
Sbjct: 111 ALHSSYDELAATLARMFPTNDHQGEKKMANDDHGDAAGP--------------VVTYEDG 156
Query: 287 DGDRMLAGDIPWKVFVSTVKRLRVM 311
DGD ML GD+PW F +VKRL+++
Sbjct: 157 DGDWMLVGDVPWDDFARSVKRLKIL 181
>Os11g0221300 AUX/IAA protein family protein
Length = 171
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 62/119 (52%), Gaps = 11/119 (9%)
Query: 194 QNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKD 253
+N A+ KP VK+ M G P GRK++L ++++Y LS +++L + + +
Sbjct: 4 RNASAEPVVKPGLSPSRFVKVFMHGEPFGRKINLALHNNYDSLSFTLKKLGNNYSMSPFE 63
Query: 254 LS-CAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVM 311
L E GA D F L+Y+D DG R GD+PW+VF +TVK++ ++
Sbjct: 64 LEGLVNKEEDGAIDSDFD----------LLYDDMDGVRYFLGDVPWEVFTTTVKKIYIV 112
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.136 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,828,991
Number of extensions: 433906
Number of successful extensions: 935
Number of sequences better than 1.0e-10: 26
Number of HSP's gapped: 891
Number of HSP's successfully gapped: 26
Length of query: 327
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 226
Effective length of database: 11,762,187
Effective search space: 2658254262
Effective search space used: 2658254262
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 156 (64.7 bits)