BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0360400 Os05g0360400|AK106046
(200 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0360400 Zinc finger, RING-type domain containing protein 325 1e-89
Os05g0360300 192 1e-49
Os05g0359500 Similar to RING-H2 finger protein ATL5C precursor 106 1e-23
Os01g0311400 Zinc finger, RING-type domain containing protein 92 2e-19
Os03g0340100 77 9e-15
Os12g0596200 Similar to RING-H2 protein 75 2e-14
Os07g0146300 75 2e-14
Os01g0311100 73 1e-13
Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-) 72 2e-13
Os02g0561400 72 2e-13
Os02g0561000 72 2e-13
Os02g0560600 72 2e-13
Os02g0560200 72 2e-13
Os02g0572350 Zinc finger, RING-type domain containing protein 70 1e-12
AK109940 70 1e-12
Os08g0445000 Similar to RING-H2 finger protein ATL5A 70 1e-12
Os12g0432600 Zinc finger, RING-type domain containing protein 69 3e-12
Os01g0212700 Zinc finger, RING-type domain containing protein 69 3e-12
Os03g0340400 68 4e-12
AK064102 68 5e-12
Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1... 68 5e-12
Os02g0820200 Zinc finger, RING-type domain containing protein 68 5e-12
Os02g0679400 67 8e-12
Os04g0590900 Similar to RING-H2 finger protein ATL1B 67 9e-12
Os11g0610600 Similar to RING-H2 finger protein ATL2N 67 1e-11
Os02g0572300 67 1e-11
Os06g0187300 67 1e-11
Os03g0398600 Zinc finger, RING-type domain containing protein 67 1e-11
Os04g0450400 Zinc finger, RING-type domain containing protein 66 2e-11
Os09g0468300 Zinc finger, RING-type domain containing protein 65 2e-11
Os02g0686100 Similar to RING-H2 finger protein ATL1B 65 3e-11
Os08g0484200 Zinc finger, RING-type domain containing protein 65 4e-11
Os08g0563500 65 4e-11
Os11g0150450 Zinc finger, RING-type domain containing protein 65 5e-11
Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-... 65 5e-11
Os11g0703200 64 5e-11
Os12g0433100 Zinc finger, RING-type domain containing protein 64 5e-11
Os01g0822800 Similar to RING-H2 finger protein ATL3C 64 5e-11
Os02g0692000 Similar to RING finger family protein 64 7e-11
Os06g0167200 Similar to RING-H2 finger protein ATL1R (RING-... 64 7e-11
Os02g0561900 64 8e-11
Os09g0376700 Zinc finger, RING-type domain containing protein 64 9e-11
Os05g0164200 Zinc finger, RING-type domain containing protein 64 1e-10
>Os05g0360400 Zinc finger, RING-type domain containing protein
Length = 200
Score = 325 bits (834), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 164/200 (82%), Positives = 164/200 (82%)
Query: 1 MSTPTVQMVAPAAAVVEDPSKHWTRHGPVLTACLVGINLLMVLLVFFYFWRFFSGKRGPP 60
MSTPTVQMVAPAAAVVEDPSKHWTRHGPVLTACLVGINLLMVLLVFFYFWRFFSGKRGPP
Sbjct: 1 MSTPTVQMVAPAAAVVEDPSKHWTRHGPVLTACLVGINLLMVLLVFFYFWRFFSGKRGPP 60
Query: 61 TSSTSTMXXXXXXXXXXXXXXXXXXXXTSPGRHHQDREDIASSLPVFVYSSSAAAPDVXX 120
TSSTSTM TSPGRHHQDREDIASSLPVFVYSSSAAAPDV
Sbjct: 61 TSSTSTMASGGDDDEEEGASSSSSSADTSPGRHHQDREDIASSLPVFVYSSSAAAPDVGD 120
Query: 121 XXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLL 180
VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLL
Sbjct: 121 AGGNGKAAAAAECAVCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLL 180
Query: 181 HPAAAEPAKNDQPKDDDCPV 200
HPAAAEPAKNDQPKDDDCPV
Sbjct: 181 HPAAAEPAKNDQPKDDDCPV 200
>Os05g0360300
Length = 199
Score = 192 bits (488), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 121/209 (57%), Gaps = 26/209 (12%)
Query: 8 MVAPAAAVVEDPSKHWTRHGPVLTACLVGINLLMVLLVFFYFWRFFSGKRGPPTSSTSTM 67
M AA VED +KHW HG VLTA +VGINLLMVLLVFFYFWRFFSGKRGPP SS+S
Sbjct: 1 MSTVAAPAVEDANKHWAPHGAVLTAFVVGINLLMVLLVFFYFWRFFSGKRGPPPSSSSMA 60
Query: 68 XXXXXXXXXXXXXXXXXXXXTS---------PGRHHQDREDIASSLPVFVYSSSAAAPDV 118
P Q EDIASSLPV VYSS+ DV
Sbjct: 61 GGADDEEAASSDSDTSPAASPRVSWRRLREWPAGRRQQEEDIASSLPVSVYSSA----DV 116
Query: 119 XXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAV 178
VCIVEFRDGD ARLLPRCGHRFHADC+GAWL+LHSTCPLCRAA
Sbjct: 117 GNGKAAAECA------VCIVEFRDGDLARLLPRCGHRFHADCVGAWLRLHSTCPLCRAAA 170
Query: 179 LLHPA----AAEPAKNDQPKDD---DCPV 200
L A A+ P ND PKDD CPV
Sbjct: 171 LPLAASTATASVPNNNDDPKDDAAAHCPV 199
>Os05g0359500 Similar to RING-H2 finger protein ATL5C precursor
Length = 223
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 21 KHWTRHGPVLTACLVGINLLMVLLVFFYFWRFFSGKRGPPTSSTSTMXXXXXXXXXXXXX 80
+ W G LTA LVG+N+ +VLL+++Y WRFFSGK S
Sbjct: 15 ERWAPSGRQLTASLVGLNVFVVLLIYYYLWRFFSGK-----SDGGVPGGGGGGDDEDAES 69
Query: 81 XXXXXXXTSPG-RHHQDREDIASSLPVFVYSSSAAAPD-------------VXXXXXXXX 126
SP R + E ++LPVFV + +
Sbjct: 70 LAAPSRAVSPKPRDREAMELAITALPVFVVHVPTPSDNSGDGGGGAGDAAAADANGGGGG 129
Query: 127 XXXXXXXXVCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
+CI EF DG+ RLLPRCGHRFHA C+ W QLHSTCPLCRA VL
Sbjct: 130 GGKVLECAICIAEFADGEEGRLLPRCGHRFHARCVDMWFQLHSTCPLCRAGVL 182
>Os01g0311400 Zinc finger, RING-type domain containing protein
Length = 198
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 87/185 (47%), Gaps = 23/185 (12%)
Query: 2 STPTVQMVAPAAAVVEDPSKHWTRHGPVLTACLVGINLLMVLLVFFYFWRFFSGKRGPPT 61
S PT AP W HG LT CLV +N+ +VLLV+ YFWR FS KR
Sbjct: 18 SVPTADAAAPL----------WAPHGRALTGCLVVVNVALVLLVYLYFWRVFSRKRAAAA 67
Query: 62 SSTSTMXXXXXXXXXXXXXXXXXXXXTSPGRHHQDREDIASSLPVFVYSSSAAAPDVXXX 121
+S + R R+D+ +SLPVFV SS
Sbjct: 68 ASARSDDDDDDDEASSSASAPPPAAAAVSVRT---RDDVLASLPVFVVRSSGGE------ 118
Query: 122 XXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLH 181
VCI E RDGD R LPRCGHRFHA C+ WL+LH+TCPLCRA+V+
Sbjct: 119 ----KAEAEAECAVCIAELRDGDECRALPRCGHRFHASCVDGWLRLHTTCPLCRASVVAL 174
Query: 182 PAAAE 186
AA E
Sbjct: 175 AAAPE 179
>Os03g0340100
Length = 200
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 36/44 (81%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAV 178
VCI E RDGD RLLPRCGHRFHA+C+ W + H+TCPLCRAAV
Sbjct: 135 VCIGELRDGDTGRLLPRCGHRFHAECVDKWFRSHATCPLCRAAV 178
>Os12g0596200 Similar to RING-H2 protein
Length = 310
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 39/55 (70%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHPAAAEPAK 189
VC++EF DGD R LP C H FHADCI WL+ H++CPLCRAAV L P A P +
Sbjct: 106 VCLLEFADGDELRALPLCAHAFHADCIDVWLRAHASCPLCRAAVALPPPVASPLR 160
>Os07g0146300
Length = 209
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 99 DIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHA 158
D+ SLPV VYS S A VC+ E +GD AR LPRCGH FHA
Sbjct: 79 DVLRSLPVTVYSRSTTA-----AAAKEEEDDGVECVVCLAELEEGDEARFLPRCGHGFHA 133
Query: 159 DCIGAWLQLHSTCPLCRAAVLL 180
+C+ W+ HSTCPLCR V++
Sbjct: 134 ECVDMWVGSHSTCPLCRLTVVV 155
>Os01g0311100
Length = 249
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 35/44 (79%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAV 178
VC+ EF GD+AR LPRCGHRFH +CI AW + +STCPLCRA V
Sbjct: 149 VCLAEFEAGDKARALPRCGHRFHVECIDAWFRENSTCPLCRADV 192
>Os02g0559800 E3 ubiquitin ligase EL5 (EC 6.3.2.-)
Length = 325
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 99 DIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHA 158
++ SLPV VYS S AA VC+ E DG+ AR LPRCGH FHA
Sbjct: 102 EVLRSLPVTVYSRSTAA--AAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHA 159
Query: 159 DCIGAWLQLHSTCPLCR 175
+C+ WL HSTCPLCR
Sbjct: 160 ECVDMWLGSHSTCPLCR 176
>Os02g0561400
Length = 314
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 99 DIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHA 158
++ SLPV VYS S AA VC+ E DG+ AR LPRCGH FHA
Sbjct: 91 EVLRSLPVTVYSRSTAA--AAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHA 148
Query: 159 DCIGAWLQLHSTCPLCR 175
+C+ WL HSTCPLCR
Sbjct: 149 ECVDMWLGSHSTCPLCR 165
>Os02g0561000
Length = 314
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 99 DIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHA 158
++ SLPV VYS S AA VC+ E DG+ AR LPRCGH FHA
Sbjct: 91 EVLRSLPVTVYSRSTAA--AAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHA 148
Query: 159 DCIGAWLQLHSTCPLCR 175
+C+ WL HSTCPLCR
Sbjct: 149 ECVDMWLGSHSTCPLCR 165
>Os02g0560600
Length = 314
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 99 DIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHA 158
++ SLPV VYS S AA VC+ E DG+ AR LPRCGH FHA
Sbjct: 91 EVLRSLPVTVYSRSTAA--AAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHA 148
Query: 159 DCIGAWLQLHSTCPLCR 175
+C+ WL HSTCPLCR
Sbjct: 149 ECVDMWLGSHSTCPLCR 165
>Os02g0560200
Length = 314
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 99 DIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHA 158
++ SLPV VYS S AA VC+ E DG+ AR LPRCGH FHA
Sbjct: 91 EVLRSLPVTVYSRSTAA--AAAKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHA 148
Query: 159 DCIGAWLQLHSTCPLCR 175
+C+ WL HSTCPLCR
Sbjct: 149 ECVDMWLGSHSTCPLCR 165
>Os02g0572350 Zinc finger, RING-type domain containing protein
Length = 325
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHP 182
VC+ EFRDG+ RLLP+CGH FH CI AWL+ H CPLCRA V LHP
Sbjct: 111 VCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHV-LHP 157
>AK109940
Length = 373
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHP 182
VC+ EFRDG+ RLLP+CGH FH CI AWL+ H CPLCRA V LHP
Sbjct: 159 VCLGEFRDGELLRLLPKCGHAFHVPCIDAWLRAHVNCPLCRAHV-LHP 205
>Os08g0445000 Similar to RING-H2 finger protein ATL5A
Length = 501
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
VC+ EF D DR RLLP+C H FH DCI WL HSTCPLCR ++L
Sbjct: 155 VCLCEFADDDRLRLLPKCSHAFHVDCIDTWLLSHSTCPLCRRSLL 199
>Os12g0432600 Zinc finger, RING-type domain containing protein
Length = 185
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 97 REDIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRF 156
+EDI ++P F Y ++ V VCI +DGD R LP CGH F
Sbjct: 100 QEDI-EAIPAFEYRRGSSGSGVAQCA------------VCIAAVKDGDTVRRLPACGHAF 146
Query: 157 HADCIGAWLQLHSTCPLCRAAVLLHPAAAEPAKNDQP 193
HA C+ WL+ H+TCP+CRA V+ PA ++P
Sbjct: 147 HAPCVDGWLRDHATCPMCRADVVKVAGETTPATEEEP 183
>Os01g0212700 Zinc finger, RING-type domain containing protein
Length = 185
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHPAAAEPAKN 190
VC+ + G++ R LP+CGH FHA+C+ AWL+ HSTCP+CRAAV PA A AK
Sbjct: 101 VCLGQVDAGEKVRQLPKCGHLFHAECVDAWLRAHSTCPMCRAAV-EGPATAAIAKK 155
>Os03g0340400
Length = 128
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 33/41 (80%)
Query: 139 EFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
E RDG+R RLLPRCGHRFH +CI W + +STCP CRAAV+
Sbjct: 51 EVRDGERGRLLPRCGHRFHVECIDRWFRANSTCPFCRAAVV 91
>AK064102
Length = 357
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLL 180
VC+ EFRDG+ RLLPRC H FHA CI WL+ H CPLCR+ V++
Sbjct: 159 VCLGEFRDGELVRLLPRCSHPFHAPCIDTWLRAHVNCPLCRSPVVV 204
>Os02g0572200 Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion
protein)
Length = 349
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 36/54 (66%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHPAAAEPA 188
VC+ F DGD RLLP+C H FH DCI WL+ H TCPLCRA + PA + PA
Sbjct: 125 VCLTVFDDGDDLRLLPQCSHAFHPDCIDPWLEGHVTCPLCRANLEKQPAPSPPA 178
>Os02g0820200 Zinc finger, RING-type domain containing protein
Length = 320
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 60/151 (39%), Gaps = 13/151 (8%)
Query: 28 PVLTACLVGINLLMVLLVFFYFWRFFSGKRGPPTSSTSTMXXXXXXXXXXXXXXXXXXXX 87
P+L ++GI VLL+ +Y + +SS+ T
Sbjct: 50 PILVLTVLGILTTSVLLLTYYIFVIRCCLNWNSSSSSDTRTAGLISRRRRGAASSSLPAV 109
Query: 88 TSPGRHHQDREDIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRAR 147
P E SLP F Y + VCI EF++ +R R
Sbjct: 110 AEP---RGLEEAAIQSLPAFRYRKA----------IKDTTADSSECAVCISEFQEEERVR 156
Query: 148 LLPRCGHRFHADCIGAWLQLHSTCPLCRAAV 178
LLP C H FH DCI WLQ ++ CPLCRAA+
Sbjct: 157 LLPSCLHVFHVDCIDTWLQGNANCPLCRAAI 187
>Os02g0679400
Length = 110
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 32/45 (71%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
VC+ E +GD AR LPRCGH FHA+C+ WL HSTCP CR V+
Sbjct: 51 VCLAELEEGDEARFLPRCGHGFHAECVDMWLGSHSTCPRCRLTVI 95
>Os04g0590900 Similar to RING-H2 finger protein ATL1B
Length = 383
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 31/46 (67%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLL 180
VC+ EF DG+ RLLPRC H FH CI WL+ HS CPLCRA +
Sbjct: 159 VCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITF 204
>Os11g0610600 Similar to RING-H2 finger protein ATL2N
Length = 405
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 32/46 (69%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLL 180
VC+ EFRDG+ RLLPRC H FH CI WL+ H CPLCRA V +
Sbjct: 224 VCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVNCPLCRAPVQI 269
>Os02g0572300
Length = 348
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
VC++EF D D RLLP C H FH +CIG WL+ H TCPLCRA VL
Sbjct: 131 VCLLEFEDDDALRLLPACPHAFHPECIGLWLEKHVTCPLCRANVL 175
>Os06g0187300
Length = 444
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 103 SLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHADCIG 162
+LPVFVY + A VC+ EF D+ RLLP CGH FH CI
Sbjct: 101 ALPVFVYRAVVGA--------GLRKDDPFDCAVCLCEFAGDDKLRLLPTCGHAFHVPCID 152
Query: 163 AWLQLHSTCPLCRAAVL 179
AWL HSTCP+CR +VL
Sbjct: 153 AWLLSHSTCPICRGSVL 169
>Os03g0398600 Zinc finger, RING-type domain containing protein
Length = 267
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
VCI E G+ AR+LPRCGH FH +C+ WL+ +STCPLCR AV+
Sbjct: 93 VCITELAAGESARVLPRCGHGFHVECVDMWLRSNSTCPLCRCAVI 137
>Os04g0450400 Zinc finger, RING-type domain containing protein
Length = 415
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
VC+ EF+DG+ RLLP+CGH FH CI WL+ H CPLCR+ VL
Sbjct: 204 VCLGEFQDGELVRLLPKCGHAFHVPCIDTWLRAHVNCPLCRSDVL 248
>Os09g0468300 Zinc finger, RING-type domain containing protein
Length = 392
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHPAAAEPAKN 190
VCI EF D + RLLP+C H FH DCI WL H+TCP+CRA ++ A+EPA +
Sbjct: 127 VCISEFDDDETLRLLPKCSHVFHQDCIDTWLASHATCPVCRANLV--DGASEPASD 180
>Os02g0686100 Similar to RING-H2 finger protein ATL1B
Length = 189
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 12/79 (15%)
Query: 97 REDIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRF 156
++++ SLP Y S + +C+VEF DG R+LP+C HRF
Sbjct: 76 KKEVLRSLPTVTYVSDGGGGEAEECA------------ICLVEFEDGQAVRVLPQCDHRF 123
Query: 157 HADCIGAWLQLHSTCPLCR 175
HA CI WL+ HS+CP CR
Sbjct: 124 HAACIDTWLRAHSSCPSCR 142
>Os08g0484200 Zinc finger, RING-type domain containing protein
Length = 413
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 31/42 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRA 176
VC+ EF D + RLLPRC H FHADCI AWL H TCP+CRA
Sbjct: 147 VCLSEFDDDETLRLLPRCSHAFHADCIDAWLASHVTCPVCRA 188
>Os08g0563500
Length = 241
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 36/63 (57%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVLLHPAAAEPAKNDQPK 194
VC+ EFR+G+R R LP C H FH DCI AWL TCPLCRA V + A
Sbjct: 98 VCLGEFREGERLRRLPPCLHSFHIDCIDAWLATALTCPLCRAHVTVDTNHIAAATTSTRH 157
Query: 195 DDD 197
DDD
Sbjct: 158 DDD 160
>Os11g0150450 Zinc finger, RING-type domain containing protein
Length = 169
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 17/75 (22%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCR-----------------AA 177
VC+ ++ + D R+LP CGH FHA CI WL HSTCP+CR +
Sbjct: 26 VCLADYEEKDVLRILPYCGHNFHALCIDIWLMQHSTCPVCRISLCDYPDSKQTMSPLPSE 85
Query: 178 VLLHPAAAEPAKNDQ 192
V++ P + EP+++DQ
Sbjct: 86 VIIPPCSPEPSRSDQ 100
>Os06g0192800 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 321
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 103 SLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFHADCIG 162
+LPV VY+ AAA VC+ E DG++ R+LP+C H FH +CI
Sbjct: 92 ALPVTVYAKPAAA----------RGEEALECAVCLSEVADGEKVRMLPKCDHGFHVECID 141
Query: 163 AWLQLHSTCPLCRAAV 178
W H TCPLCRA V
Sbjct: 142 MWFHSHDTCPLCRAPV 157
>Os11g0703200
Length = 170
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRA 176
VC+ EF DG+ R+LP C H FH DCIG WL+ +++CPLCRA
Sbjct: 103 VCLSEFGDGEAVRVLPECMHYFHVDCIGTWLRANTSCPLCRA 144
>Os12g0433100 Zinc finger, RING-type domain containing protein
Length = 212
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 97 REDIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRF 156
+ED+ +++P F YS + VCI R G+ R LP CGH F
Sbjct: 130 QEDVEAAIPAFEYSKGSGG-----------AAEAEQCAVCIGVVRRGETVRRLPACGHAF 178
Query: 157 HADCIGAWLQLHSTCPLCRAAV 178
HA CI WL+ H+TCP+CRA V
Sbjct: 179 HAACIDGWLRAHATCPVCRADV 200
>Os01g0822800 Similar to RING-H2 finger protein ATL3C
Length = 208
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAVL 179
+C+ EF DG++ R+LPRCGH FH C+ WL H +CP CR +VL
Sbjct: 126 ICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHDSCPTCRGSVL 170
>Os02g0692000 Similar to RING finger family protein
Length = 389
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAV 178
VC+ EFR+G+ RLLP+C H FH CI WL+ HS CPLCR +
Sbjct: 166 VCLGEFREGESLRLLPKCSHAFHVPCIDTWLKSHSNCPLCRCNI 209
>Os06g0167200 Similar to RING-H2 finger protein ATL1R (RING-H2 finger protein
ATL8)
Length = 363
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 98 EDIASSLPVFVYSSSAAAPDVXXXXXXXXXXXXXXXXVCIVEFRDGDRARLLPRCGHRFH 157
+D+ +LPVF+Y VC+ EF DR RLLP CGH FH
Sbjct: 97 QDVIDALPVFMYREVVVGV-GGGGGAGGGAKEPFDCAVCLCEFAGDDRLRLLPVCGHAFH 155
Query: 158 ADCIGAWLQLHSTCPLCR 175
DCI WL +STCPLCR
Sbjct: 156 IDCIDTWLLSNSTCPLCR 173
>Os02g0561900
Length = 205
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCR 175
VC+ + DG+ AR L RCGH FHA+C+ WL HSTCPLCR
Sbjct: 123 VCLAKLEDGEEARFLRRCGHGFHAECVDMWLGSHSTCPLCR 163
>Os09g0376700 Zinc finger, RING-type domain containing protein
Length = 392
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 30/41 (73%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCR 175
VC+ EF GDR RLLP CGH FHA CI WL+ STCPLCR
Sbjct: 154 VCLCEFDGGDRLRLLPLCGHAFHAACIDTWLRSSSTCPLCR 194
>Os05g0164200 Zinc finger, RING-type domain containing protein
Length = 178
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 135 VCIVEFRDGDRARLLPRCGHRFHADCIGAWLQLHSTCPLCRAAV 178
VC+ E DG+ RLLP C H FHA+CI WL + STCP+CRAAV
Sbjct: 115 VCLGEMEDGELGRLLPACRHVFHAECIDTWLAVSSTCPVCRAAV 158
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.136 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,966,416
Number of extensions: 241819
Number of successful extensions: 1131
Number of sequences better than 1.0e-10: 70
Number of HSP's gapped: 1138
Number of HSP's successfully gapped: 71
Length of query: 200
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 104
Effective length of database: 12,023,257
Effective search space: 1250418728
Effective search space used: 1250418728
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)