BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0150300 Os05g0150300|AK100732
(1158 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0150300 Similar to Possible global transcription activ... 1897 0.0
Os01g0367900 Similar to Possible global transcription activ... 1747 0.0
Os05g0144300 DEAD/DEAH box helicase, N-terminal domain cont... 479 e-135
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 409 e-114
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 375 e-104
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 365 e-100
Os03g0101700 Similar to SNF2P 346 6e-95
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 278 2e-74
AK111184 208 2e-53
Os04g0566100 Similar to Transcriptional activator SRCAP 206 7e-53
Os07g0660200 Similar to Chromodomain-helicase-DNA-binding p... 184 4e-46
Os02g0762800 DEAD/DEAH box helicase, N-terminal domain cont... 175 1e-43
Os02g0689800 DEAD/DEAH box helicase domain containing protein 170 5e-42
Os07g0636200 DEAD/DEAH box helicase, N-terminal domain cont... 142 1e-33
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 132 1e-30
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 120 5e-27
Os02g0650800 118 2e-26
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 115 3e-25
Os05g0392400 SNF2-related domain containing protein 113 7e-25
Os07g0598300 DEAD/DEAH box helicase, N-terminal domain cont... 112 2e-24
Os02g0527100 DEAD/DEAH box helicase, N-terminal domain cont... 112 2e-24
AK110250 108 2e-23
Os01g0636700 RNA-binding region RNP-1 (RNA recognition moti... 103 1e-21
Os07g0642400 DEAD/DEAH box helicase, N-terminal domain cont... 100 5e-21
Os07g0434500 DEAD/DEAH box helicase, N-terminal domain cont... 97 5e-20
Os06g0255700 DEAD/DEAH box helicase, N-terminal domain cont... 97 7e-20
Os01g0779400 SWAP/Surp domain containing protein 94 7e-19
Os07g0511500 SNF2-related domain containing protein 93 1e-18
Os03g0165266 DEAD/DEAH box helicase, N-terminal domain cont... 92 2e-18
Os08g0180300 DEAD/DEAH box helicase, N-terminal domain cont... 87 5e-17
Os04g0629300 DEAD/DEAH box helicase, N-terminal domain cont... 86 2e-16
Os09g0442700 SNF2-related domain containing protein 80 1e-14
Os04g0692750 DEAD/DEAH box helicase, N-terminal domain cont... 73 2e-12
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 1897 bits (4915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 933/991 (94%), Positives = 933/991 (94%)
Query: 168 TGNAEIGKRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAH 227
TGNAEIGKRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAH
Sbjct: 168 TGNAEIGKRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAH 227
Query: 228 FAKGNQSTEKKSRGRGRHASKMTXXXXXXXXXXXXXDALDGAGGTRLVSQPSCIKGKMRD 287
FAKGNQSTEKKSRGRGRHASKMT DALDGAGGTRLVSQPSCIKGKMRD
Sbjct: 228 FAKGNQSTEKKSRGRGRHASKMTEEEEDEEYLKEEEDALDGAGGTRLVSQPSCIKGKMRD 287
Query: 288 YQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLG 347
YQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLG
Sbjct: 288 YQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLG 347
Query: 348 NWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSW 407
NWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSW
Sbjct: 348 NWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSW 407
Query: 408 RYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSA 467
RYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSA
Sbjct: 408 RYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSA 467
Query: 468 ETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQ 527
ETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQ
Sbjct: 468 ETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQ 527
Query: 528 YYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGK 587
YYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGK
Sbjct: 528 YYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGK 587
Query: 588 MVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEA 647
MVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEA
Sbjct: 588 MVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEA 647
Query: 648 FNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQV 707
FNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQV
Sbjct: 648 FNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQV 707
Query: 708 FRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKD 767
FRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKD
Sbjct: 708 FRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKD 767
Query: 768 STITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKFKMDDTAELYXXXXXXXXXXXXXXX 827
STITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKFKMDDTAELY
Sbjct: 768 STITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKFKMDDTAELYDFDDDKDENKLDFKK 827
Query: 828 XVTDNWIEPTSRRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLN 887
VTDNWIEPTSRRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLN
Sbjct: 828 LVTDNWIEPTSRRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLN 887
Query: 888 ELYEKEVKYLVQANQKKDTVGEGDDEDXXXXXXXXXXXXXXXXXXXGFSTWTRRDFNTFI 947
ELYEKEVKYLVQANQKKDTVGEGDDED GFSTWTRRDFNTFI
Sbjct: 888 ELYEKEVKYLVQANQKKDTVGEGDDEDQLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFI 947
Query: 948 RACEKYGRNDIKNISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRK 1007
RACEKYGRNDIKNISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRK
Sbjct: 948 RACEKYGRNDIKNISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRK 1007
Query: 1008 DEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAF 1067
DEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAF
Sbjct: 1008 DEIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAF 1067
Query: 1068 RMSPLFRFDWFVKSRTTQELARRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSS 1127
RMSPLFRFDWFVKSRTTQELARRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSS
Sbjct: 1068 RMSPLFRFDWFVKSRTTQELARRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSS 1127
Query: 1128 RSLDTPPXXXXXXXXXXYTEANAGSGRRRRG 1158
RSLDTPP YTEANAGSGRRRRG
Sbjct: 1128 RSLDTPPQSSSKRRRQSYTEANAGSGRRRRG 1158
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 1747 bits (4524), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 857/995 (86%), Positives = 901/995 (90%), Gaps = 7/995 (0%)
Query: 169 GNAEIGKRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAHF 228
G A +GKRE+A+L+EMQKLKK KIQEILD QN A+DADMNNKGKGRLKYLLQQTEIFAHF
Sbjct: 115 GGAVVGKREKARLKEMQKLKKQKIQEILDTQNAAVDADMNNKGKGRLKYLLQQTEIFAHF 174
Query: 229 AKGNQSTEKKSRGRGRHASKMTXXXXXXXXXXXXXDALDGAGGTRLVSQPSCIKGKMRDY 288
AKGNQS EKK RGRGRHASKMT DAL G+GGTRL+SQPSCIKGKMRDY
Sbjct: 175 AKGNQSKEKKPRGRGRHASKMTEEEEDEEYLKEEEDALAGSGGTRLLSQPSCIKGKMRDY 234
Query: 289 QLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGN 348
QLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGN
Sbjct: 235 QLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGN 294
Query: 349 WMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWR 408
W+KEIQRFCP+LRA+KFLGNPEERNHIRENLL PGKFDVCVTSFEMAIKEKT LKRFSWR
Sbjct: 295 WIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWR 354
Query: 409 YIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAE 468
YIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAE
Sbjct: 355 YIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAE 414
Query: 469 TFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQY 528
TFD+WFQISGENDQ EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMS+MQKQY
Sbjct: 415 TFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQY 474
Query: 529 YRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKM 588
YRALLQKDLEV+NAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG+HL+ENAGKM
Sbjct: 475 YRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKM 534
Query: 589 VLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAF 648
VLLDKLLPKLK+RDSRVLIFSQMTRLLDILEDYLMY+GYQYCRIDGNTGGEDRDASIEAF
Sbjct: 535 VLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAF 594
Query: 649 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 708
NKPGSEKFVFLLSTRAGGLGINLATADVV+LYDSDWNPQ DLQAQDRAHRIGQKKEVQVF
Sbjct: 595 NKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVF 654
Query: 709 RFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDS 768
RFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQK VNKD+LLQMVRFGAEMVFSSKDS
Sbjct: 655 RFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDS 714
Query: 769 TITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKFKMDDTAELYXXXXXXXXXXXXXXXX 828
TITDEDIDRIIAKGEE TA+LDAKMKKFTEDAIKFKMDDTAELY
Sbjct: 715 TITDEDIDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKEENKLDFKKL 774
Query: 829 VTDNWIEPTSRRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLNE 888
V+DNWIEP RRERKRNYSES+YFKQALRQGAPAKPREPRIPRMPHLHDFQFFN QRLNE
Sbjct: 775 VSDNWIEP-PRRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNE 833
Query: 889 LYEKEVKYLVQANQKKDTVGEGDDEDXXXXXXXXXXXXXXXXXXXGFSTWTRRDFNTFIR 948
LYEKEV+YL+QANQKKDT+ +G+DED GF+TWTRRDFNTFIR
Sbjct: 834 LYEKEVRYLMQANQKKDTI-DGEDEDQLEPLTAEEQEEKEQLLEEGFATWTRRDFNTFIR 892
Query: 949 ACEKYGRNDIKNISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRKD 1008
ACEKYGRNDI++I++EMEGKTEEEVQRYAKVF+ERYKEL+DYDR+IKNIE+GEARI RKD
Sbjct: 893 ACEKYGRNDIRSIAAEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKD 952
Query: 1009 EIMKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAFR 1068
EIM+AIGKKLDRYKNPWLELKIQYGQNKGK YNEECDRFMLCMVHKLGYGNWDELKAAFR
Sbjct: 953 EIMRAIGKKLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFR 1012
Query: 1069 MSPLFRFDWFVKSRTTQELARRCETLIRLVEKENQEYDERERLARKDK---KNMSPAKRS 1125
MSPLFRFDWFVKSRTTQELARRC+TLIRLVEKENQEYDE+ER ARKDK KNM+P KRS
Sbjct: 1013 MSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKDKRMAKNMTPTKRS 1072
Query: 1126 SSRSL--DTPPXXXXXXXXXXYTEANAGSGRRRRG 1158
+ R +T P + GSGRR+RG
Sbjct: 1073 ALRVSEGETTPSNSFKRRRQSLMDDYVGSGRRKRG 1107
>Os05g0144300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1128
Score = 479 bits (1234), Expect = e-135, Method: Compositional matrix adjust.
Identities = 249/524 (47%), Positives = 356/524 (67%), Gaps = 19/524 (3%)
Query: 273 RLVSQPSCIKG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFR 331
++ QPS ++G ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+L+ YL E +
Sbjct: 428 KVTEQPSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIALIAYLLEKK 487
Query: 332 GITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTS 391
+TGPH+++APK+ L NW E + + P + I + G P++R +RE +F+V +T
Sbjct: 488 EVTGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALREKNFGQRQFNVLLTH 547
Query: 392 FEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTM-RIYNTNYRLLITGTPLQNNLH 450
+++ +K+ LK+ W Y+I+DE HR+KN L++T+ Y RLL+TGTP+QN+L
Sbjct: 548 YDLILKDLKFLKKVHWHYLIVDEGHRLKNHECALARTLVSRYQIRRRLLLTGTPIQNSLQ 607
Query: 451 ELWSLLNFLLPEIFSSAETFDDWF------QIS-GENDQHEVVQQLHKVLRPFLLRRLKS 503
ELWSLLNF+LP IF+S++ F++WF ++S + +Q ++ +LH+VLRPFLLRR K
Sbjct: 608 ELWSLLNFILPNIFNSSQNFEEWFNAPFACEVSLNDEEQLLIIHRLHQVLRPFLLRRKKD 667
Query: 504 DVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHP 563
+VEK LP K + ILK MS QK YY + + +G + K L N++MQLRKCCNHP
Sbjct: 668 EVEKYLPVKTQVILKCDMSAWQKAYYEQVTSNGRVSLGSGLKSKALQNLSMQLRKCCNHP 727
Query: 564 YLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM 623
YLF E Y + ++ ++GK LLD+LLPKL+ RVL+FSQMT+LLDILE YL
Sbjct: 728 YLF--VEHYNMYQRQE-IVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKLLDILEVYLQ 784
Query: 624 YKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSD 683
++Y R+DG+T E+R + FNK SE F+FLLSTRAGGLG+NL TAD VI++DSD
Sbjct: 785 MYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTRAGGLGLNLQTADTVIIFDSD 844
Query: 684 WNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRL-AE 742
WNPQ+D QA+DRAHRIGQK EV+VF + +IEE++++RA +K+ +DA VIQ G
Sbjct: 845 WNPQMDQQAEDRAHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKMGIDAKVIQAGLFNTT 904
Query: 743 QKAVNKDELLQ-MVRFGAEMVFSSKDSTITDE-DIDRIIAKGEE 784
A ++ LLQ ++R G SS + I E +I+R+ A+ +E
Sbjct: 905 STAQDRRALLQEILRRGT----SSLGTDIPSEREINRLAARNDE 944
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 409 bits (1051), Expect = e-114, Method: Compositional matrix adjust.
Identities = 224/513 (43%), Positives = 317/513 (61%), Gaps = 37/513 (7%)
Query: 283 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 342
G + YQL GLN+L + + IL DEMGLGKT+Q+I+ LG L F GPH+VVAP
Sbjct: 259 GTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSL--FVDKLGPHLVVAP 316
Query: 343 KSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPG------------------- 383
STL NW +E + P + + + G+ R IR+
Sbjct: 317 LSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDK 376
Query: 384 -----KFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRL 438
KFDV +TS+EM + T LK W +I+DE HR+KN++S L ++ Y+T +R+
Sbjct: 377 KQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRV 436
Query: 439 LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLL 498
L+TGTP+QNNL EL+ L++FL + F S + F+ ++ Q V++LH +L+P LL
Sbjct: 437 LLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFKDINQDKQ---VEKLHGMLKPHLL 493
Query: 499 RRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNA-GGERKRLLNIAMQLR 557
RR K DV K LPPKKE IL+V ++ QK+YY+A+L K+ EV+ G L+N+ M+LR
Sbjct: 494 RRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELR 553
Query: 558 KCCNHPYLFQGAEPGPPYTTGD---HLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRL 614
K C H F EP P + + L+E++GKM LLDK++ KLKE+ RVLI+SQ +
Sbjct: 554 KLCCHA--FMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHM 611
Query: 615 LDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATA 674
LD+LEDYL Y+ + Y RIDG GG +R I+ FN S +F FLLSTRAGGLGINLATA
Sbjct: 612 LDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATA 671
Query: 675 DVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 734
D VI+YDSDWNP DLQA RAHR+GQ +V ++R + TIEE++++ KK+ L+ LV
Sbjct: 672 DTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLV 731
Query: 735 IQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKD 767
+ GRL + + ++EL ++R G++ +F ++
Sbjct: 732 V--GRLTKGTNIVQEELDDIIRHGSKELFDDEN 762
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/501 (42%), Positives = 311/501 (62%), Gaps = 20/501 (3%)
Query: 283 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 342
G + DYQL GL WLI ++ + ILADEMGLGKT+Q + L ++ + P +++AP
Sbjct: 532 GALYDYQLQGLQWLIDNFKTRRSVILADEMGLGKTVQVVCFLYHIIKESLTASPALILAP 591
Query: 343 KSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIR--ENLLVPGK--FDVCVTSFEMAIKE 398
KS L W KE ++ L I + G+ + R I+ E GK FD VTS+E +
Sbjct: 592 KSILLQWEKEFCQWASDLNVIVYQGDRDSRKCIQVHEMYSSDGKPLFDALVTSYEFVQID 651
Query: 399 KTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNF 458
K L++F W I+IDEAHR+K + L+ ++ Y + +RLL+TGTPLQNN+ EL+SLL++
Sbjct: 652 KAVLQKFKWSTIVIDEAHRMKKLDCNLAACLKRYCSEFRLLLTGTPLQNNIMELFSLLHY 711
Query: 459 LLPEIFSSAETFDDWFQISGEND--QHEVVQQLHKVLRPFLLRRLKSDV-EKGLPPKKET 515
+ P+ FS + + I D E V ++H +L+P +LRR+KSDV +P KK
Sbjct: 712 IDPDEFSDPKADGLFSPIESGRDLTMDEKVARIHNILKPRMLRRMKSDVLTDSMPVKKWV 771
Query: 516 ILKVGMSEMQKQYYRALLQKDLEVVNAG---GERKRLLNIAMQLRKCCNHPYLFQGAEPG 572
+ +++ Q++ Y +L+++ +N+ G + L NI M+LRKCCNHP G E G
Sbjct: 772 EVPCALADSQRELYINILERNYSKLNSAIRNGRKLSLNNILMELRKCCNHPV---GLEVG 828
Query: 573 PPYTTGD--HLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYC 630
T LI ++GK+ LL KLLP+LKER +RVLIFSQMTR+LDILED+L GY+Y
Sbjct: 829 QQATEDVFLSLIASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYA 888
Query: 631 RIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDL 690
RIDG T R SIE + SE F+FL+STRAGG+G++L AD VI+YD D+NP +DL
Sbjct: 889 RIDGQTSLSARQESIEEYKNIDSETFIFLMSTRAGGMGVDLPGADRVIIYDPDFNPFMDL 948
Query: 691 QAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDE 750
QAQ RAHRIGQ + V V++ T+ ++EEK+++++ +KLA++ +++ K + DE
Sbjct: 949 QAQSRAHRIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMNSS-----KKPSADE 1003
Query: 751 LLQMVRFGAEMVFSSKDSTIT 771
L ++ GA+ + K S +
Sbjct: 1004 LQSILLHGAKTIVDRKISATS 1024
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/485 (41%), Positives = 293/485 (60%), Gaps = 34/485 (7%)
Query: 311 EMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPE 370
EMGLGKT+ + L L I P +V+ P ST+ NWM E + P L +++ G+
Sbjct: 1 EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 60
Query: 371 ERNHIRENLLVPG------------KFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRI 418
R+ IR+ G KF+V +T++EM + + L+ SW +I+DE HR+
Sbjct: 61 ARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRL 120
Query: 419 KNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISG 478
KN +S L + + +R+L+TGTPLQNN+ E+++LLNFL P F S +F++ F
Sbjct: 121 KNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF---- 176
Query: 479 END--QHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKD 536
ND E V++L ++ P +LRRLK D + +PPK E ++ V ++ +Q +YYRA+L K+
Sbjct: 177 -NDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKN 235
Query: 537 LEV---VNAGGERKRLLNIAMQLRKCCNHPYLFQGAEP--GPPYTTGDHLIENAGKMVLL 591
+V + GG + LLNI MQLRK CNHPYL G EP G P + I+ + K+ LL
Sbjct: 236 YQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLL 295
Query: 592 DKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYK--GYQYCRIDGNTGGEDRDASIEAFN 649
+L L + RVLIFSQMT+LLDILEDYL ++ + R+DG+ +R A+I FN
Sbjct: 296 HSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFN 355
Query: 650 KPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFR 709
+ S +FVFLLSTR+ GLGINLATAD VI+YDSD+NP D+QA +RAHRIGQ + V+R
Sbjct: 356 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYR 414
Query: 710 FCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDST 769
++EE+++ A KKL LD L + K+ ++ E+ ++R+G E +F + D
Sbjct: 415 LVVRASVEERILHLAKKKLMLDQLFV-------NKSESQKEVEDIIRWGTEELFRNSDVA 467
Query: 770 ITDED 774
+ D +
Sbjct: 468 VKDNN 472
>Os03g0101700 Similar to SNF2P
Length = 842
Score = 346 bits (887), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 206/545 (37%), Positives = 313/545 (57%), Gaps = 54/545 (9%)
Query: 311 EMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPE 370
+MGLGKTLQ ISLL YL GP +V+ P S W+ E +FCP LR I+++G+
Sbjct: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
Query: 371 ERNHIRENLL------------VPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRI 418
R +R + FDV +T++++A+ ++ L + W Y++IDEA R+
Sbjct: 76 HRRDLRRMMFQDVQKSSSSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
Query: 419 KNENSLLSKTM-RIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQIS 477
KN +S+L + + + RLL+TGTP+QNNL ELW+L++F +P IF + + F F+ S
Sbjct: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQS 195
Query: 478 GE-------NDQHEVVQQLHKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSEMQK 526
G+ N + + L VLR F+LRR K+ ++ G LP E + V ++ +QK
Sbjct: 196 GDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQK 255
Query: 527 QYYRALLQKDLEVV--NAGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLI 582
+ Y ++L+K+L+ + GG + L NI +QLRK +HPYLF G EP PY G+HL+
Sbjct: 256 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEP-EPYVEGEHLV 314
Query: 583 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642
+ +GK+V+LD +L KL E RVL+F+QMT+ LDIL+D+L + Y Y R+DG+ E+R
Sbjct: 315 QASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERF 374
Query: 643 ASIEAFN-KPG---------SEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQA 692
A+I++F+ +P S FVF++STRAGG+G+NL AD VI Y+ DWNPQ D QA
Sbjct: 375 AAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 434
Query: 693 QDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ-------GRLAEQKA 745
RAHRIGQ V ++ TIEE ++ RA +KL L VI + G+ E +A
Sbjct: 435 LQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYVENEA 494
Query: 746 VNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEEATAQLDAKMKKFTEDAIKFKM 805
+ ++ + FG + F + D+T + D +E T K+K +E + +
Sbjct: 495 SD----MRSIIFGLHL-FDTSDTTAETMNDDTASETIKEETM---LKLKSMSEKVVLMRS 546
Query: 806 DDTAE 810
+ +E
Sbjct: 547 HEPSE 551
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 278 bits (711), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/501 (34%), Positives = 256/501 (51%), Gaps = 58/501 (11%)
Query: 270 GGTRLVSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHE 329
GG R+ P + ++ DYQ G+ WL L+ GI+ DEMGLGKT+Q +S LG LH
Sbjct: 360 GGLRI---PGTLYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGSLHN 416
Query: 330 FRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFL----------------------- 366
G+ P +VV P + L W +E R+ P + ++ L
Sbjct: 417 -SGLYKPSIVVCPVTLLQQWRREASRWYPKFK-VEILHDSANSSSKKSKRSSDSDSEASW 474
Query: 367 ----------GNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAH 416
P ++ + +V + +T++E L W Y ++DE H
Sbjct: 475 DSDQEEAVTCSKPAKKWDDLISRVVSSGSGLLLTTYEQLRILGEKLLDIEWGYAVLDEGH 534
Query: 417 RIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQI 476
RI+N N+ ++ + T +R+++TG P+QN L ELWSL +F+ P F+ F +
Sbjct: 535 RIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAEFSV 594
Query: 477 --------SGENDQHEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGMSEM 524
+ Q + VLR P+LLRR+K+DV LP K E +L ++
Sbjct: 595 PITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVNAQLPKKTEHVLFCSLTTE 654
Query: 525 QKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTTGDHLI 582
Q+ YRA L G R L I + LRK CNHP L + A P Y
Sbjct: 655 QRATYRAFLASSEVEQIFDGNRNSLYGIDV-LRKICNHPDLLEREHAAQNPDYGNP---- 709
Query: 583 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642
E +GKM +++++L KE+ RVL+F+Q ++LDI+E++L YQY R+DG T + R
Sbjct: 710 ERSGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQRM 769
Query: 643 ASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQK 702
A I+ FN E F+F+L+T+ GGLG NL A+ +I+YD DWNP D+QA++RA RIGQ
Sbjct: 770 ALIDEFNN-TDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQT 828
Query: 703 KEVQVFRFCTEYTIEEKVIER 723
++V V+R T TIEEKV R
Sbjct: 829 RDVTVYRLITRGTIEEKVYHR 849
>AK111184
Length = 1028
Score = 208 bits (529), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 157/500 (31%), Positives = 246/500 (49%), Gaps = 55/500 (11%)
Query: 285 MRDYQLAGLNWLIRLY-------ENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPH 337
+R +Q+ G+ +L E G ILAD+MGLGKTLQTI+L+ L + P
Sbjct: 324 LRPHQIEGVKFLYERVMGMHADGEKGQGAILADKMGLGKTLQTIALVLTLLKQSCYYTPA 383
Query: 338 -------MVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGK-FDVCV 389
++V P + + NW +E +++ A+ L E R V K + V V
Sbjct: 384 SCTIERAIIVCPLTLVKNWKREFKKWIGT-SALNVLCIDEGRGCQDVARFVRSKSYHVLV 442
Query: 390 TSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNL 449
+E K K I+ DE HR+K++ + ++ + +++++GTP+QN+L
Sbjct: 443 IGYEKLRTCKDLFKDAPVGLIVCDEGHRLKSKEAKTTQMFDELSAERKIILSGTPIQNDL 502
Query: 450 HELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHK---------------VLR 494
E +++++F+ P + +S +F +IS E Q K +
Sbjct: 503 SEFFAMIDFVAPGMLNSYASFK---KISEEPIMRSRAQHCSKHTKATGQARASALMTITN 559
Query: 495 PFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALL-QKDLEVVNAGGERKRLLNIA 553
+LRR + LPPKKE +L S Q + Y+++L D+ + G LL I
Sbjct: 560 DIILRRTADILSNFLPPKKEMVLFCSPSPEQIRIYQSILASNDVRSLLRGDAGNGLLQIG 619
Query: 554 MQLRKCCNHPYLF-----QGAEPGPPYTTGD-------HLIEN----AGKMVLLDKLLPK 597
+ LRK CN P L GD + + N +GK+V + +LL K
Sbjct: 620 V-LRKLCNTPELLLRDSEADGTSAIKALVGDMARYFPPNFVRNDARFSGKLVCVMQLLEK 678
Query: 598 LK-ERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEK- 655
L+ E D +V++ S T LDI+E + K Y Y R+DG T ++R + FN+ G +
Sbjct: 679 LRAETDDKVVLVSNFTSTLDIVEAMMRKKRYSYLRLDGKTPQDERMDMVNQFNRDGVDSS 738
Query: 656 FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYT 715
FVFLLS ++GG+G+NL A+ ++L DSDWNP DLQA R HR GQKK ++R T
Sbjct: 739 FVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKVCYIYRLLLSGT 798
Query: 716 IEEKVIERAYKKLAL-DALV 734
++EK+ +R KL L D+L+
Sbjct: 799 MDEKIYQRQISKLGLTDSLI 818
>Os04g0566100 Similar to Transcriptional activator SRCAP
Length = 914
Score = 206 bits (525), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 165/554 (29%), Positives = 247/554 (44%), Gaps = 129/554 (23%)
Query: 264 DALDGAGGTRLVSQPSCIKGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTIS 322
D +D A S+ S + ++ YQL G+N+L+ L+ I G ILADEMGLGKT+Q ++
Sbjct: 308 DDVDAA----CTSEESEFEPILKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAVT 363
Query: 323 LLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVP 382
L L GPH++V P S L NW +E++++CP I F G R + L
Sbjct: 364 YLTLLRHLYNDPGPHLIVCPASVLENWERELKKWCPSFSIIMFHG--AGRTAYSKELSSL 421
Query: 383 GK---------FDVCVTSFE----MAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTM 429
GK VC + FE ++ ALKR+ W +++DEAH +K++ S + +
Sbjct: 422 GKAGYPPPFNVLLVCYSLFERRSAQQKDDRKALKRWRWSCVLMDEAHVLKDKGSFRWRNL 481
Query: 430 RIY--NTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQ 487
+ RL++TGTPLQN+LHELWSLL F++P+IF++ + D ++ D HE++
Sbjct: 482 MAVAQHARQRLMLTGTPLQNDLHELWSLLEFMMPDIFATGDI--DLKKLLNAED-HELIS 538
Query: 488 QLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGE-- 545
++ +L PF+LRRLKSDV + L PK + + V M Q Q Y + + A
Sbjct: 539 RIKSILGPFILRRLKSDVMQQLVPKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKS 598
Query: 546 -------------RKRLLNIAMQLRKCCNHPYLF------------------QGA----- 569
++++ N MQ RK NHP L +GA
Sbjct: 599 TSNFSNNVVGLIPKRQISNYFMQFRKIANHPLLIRRIYSDKDVDRIAKLLYPKGAFGFEC 658
Query: 570 -------------------------EPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSR 604
+ G D + + K L +LLP L R
Sbjct: 659 SLERATQELRKYNDFAIHQLLVSYGDSGTKGALTDEHVLGSAKCQALAELLPSLANDGHR 718
Query: 605 VLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRA 664
VLIFSQ T +LDILE L G Y R+DG G+ + A+I L R
Sbjct: 719 VLIFSQWTTMLDILEWTLEVIGVTYRRLDGGWIGKLKIAAIA-------------LDNRN 765
Query: 665 GGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERA 724
L I+ + + ++ S W T+ +++E + E A
Sbjct: 766 LSLSID---CEHITIFISTW-------------------------LVTKGSVDENIYEIA 797
Query: 725 YKKLALDALVIQQG 738
+KL LDA ++Q G
Sbjct: 798 RRKLVLDAAILQSG 811
>Os07g0660200 Similar to Chromodomain-helicase-DNA-binding protein, CHD-1-related
Length = 604
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 131/192 (68%), Gaps = 22/192 (11%)
Query: 611 MTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGIN 670
M R+LDIL +YL +G+Q+ R+DG+T + R ++E FN PGS+ F FLLSTRAGGLGIN
Sbjct: 1 MVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGIN 60
Query: 671 LATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLAL 730
LATAD VI++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++EE ++ERA KK+ L
Sbjct: 61 LATADTVIIFDSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVL 120
Query: 731 DALVIQ----QGRLAEQKA------VNKDELLQMVRFGAEMVFSSKDSTITDE------- 773
D LVIQ +GRL ++++ +K+EL ++RFGAE +F TDE
Sbjct: 121 DHLVIQKLNAEGRLEKKESKKGGSMFDKNELSAILRFGAEELFKEDK---TDEETKKKLE 177
Query: 774 --DIDRIIAKGE 783
DID I+ + E
Sbjct: 178 SMDIDEILERAE 189
>Os02g0762800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 879
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 221/463 (47%), Gaps = 67/463 (14%)
Query: 285 MRDYQLAGLNWLIR-----LYENGING-ILADEMGLGKTLQTISLLGYLHEFRGITGPHM 338
+R +Q G+ ++ L ++GI+G ILAD+MGLGKTLQ+I+LL Y +G M
Sbjct: 235 LRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLL-YTLLCQGFDAKPM 293
Query: 339 V-----VAPKSTLGNWMKEIQR----------FCPVLRAIKFLGNPEERNHIRENLLVP- 382
V V P S + NW EI + C RA G E+ L P
Sbjct: 294 VKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG--------IESFLKPL 345
Query: 383 GKFDVCVTSFEMAIKEKTALKR-FSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLIT 441
+ V + S+E + +R S +I DEAHR+KN+ +L +K + R+L++
Sbjct: 346 SRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLS 405
Query: 442 GTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQ---ISG---------ENDQHEVVQQL 489
GTP+QN+L E +S++NF P + A F +++ I G +N E +L
Sbjct: 406 GTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAEL 465
Query: 490 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQ-KDLE-VVNAGGERK 547
+ F+LRR + + LPPK ++ ++ +Q Y + K+++ +++ G ++
Sbjct: 466 SAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS 525
Query: 548 RLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKL---LPKLKERDSR 604
++L L+K CNHP L Y T N+G D L P+L S
Sbjct: 526 KVLAYITALKKLCNHPKLI--------YDTIKS--NNSGGSGFDDCLRFFPPELFSGRSG 575
Query: 605 VLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRA 664
+ LD+ + Y Y R+DG T R + FN P ++FVFLLS++A
Sbjct: 576 FVT-------LDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKA 628
Query: 665 GGLGINLATADVVILYDSDWNPQVDLQA-QDRAHRIGQKKEVQ 706
GG G+NL + +IL+D DWNP D Q Q + + G +K +Q
Sbjct: 629 GGCGLNLVGGNRLILFDPDWNPANDKQVYQRQMSKEGLQKVIQ 671
>Os02g0689800 DEAD/DEAH box helicase domain containing protein
Length = 1059
Score = 170 bits (431), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
Query: 584 NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDA 643
+ GK+ L LL +LK R LIF+QMT++LDILE+++ GY Y R+DG+T E+R
Sbjct: 92 DCGKLQELAILLRRLKSEGHRALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQT 151
Query: 644 SIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 703
++ FN + F+F+LSTR+GG+GINL AD VI YDSDWNP +D QAQDR HRIGQ +
Sbjct: 152 LMQRFNT-NPKFFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTR 210
Query: 704 EVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQG 738
EV ++R +E TIEE ++++A +K ALD LVIQ+G
Sbjct: 211 EVHIYRLISESTIEENILKKANQKRALDDLVIQRG 245
>Os07g0636200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 747
Score = 142 bits (358), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 220/475 (46%), Gaps = 54/475 (11%)
Query: 278 PSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPH 337
P+ ++ K+ +Q G+ + + ++G ++ADEMGLGKTLQ I++ LH+ P
Sbjct: 249 PTDVESKLMPFQREGVRFAL---QHGARTLIADEMGLGKTLQAIAVASCLHD----AWPV 301
Query: 338 MVVAPKSTLGNWMKEIQRF--CPVLRAIKFLGNPEERNHIRENLL---VPGKFDV----C 388
+V++P S +W IQ + P + L N L+ G F++
Sbjct: 302 LVISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVFN 361
Query: 389 VTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMR----IYNTNYRLLITGTP 444
V S+++ K K L ++ +I DE+H +KN + +TM + Y +L++GTP
Sbjct: 362 VISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQA--KRTMHSLPVLQKAKYVVLLSGTP 419
Query: 445 LQNNLHELWSLLNFLLPEIFSSAETFDD------WFQISGENDQHEVVQQLHKVLRP-FL 497
+ EL++ L L P ++ + + + +F + HE +LH +++ +
Sbjct: 420 ALSRPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHE---ELHNLMKATVM 476
Query: 498 LRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVV----NAGGERKRLLNIA 553
+RRLK DV LP K+ + +SE + ++ RAL +LE V + ++ + ++
Sbjct: 477 IRRLKKDVLSQLPVKRRQQAFLDLSEKEMRHIRALFH-ELETVKIKIQSCDSQETMDSLK 535
Query: 554 MQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKERDSRVLIFSQMTR 613
+ N Y AE P +LD L + E + + LIF+
Sbjct: 536 FAQKNLINKIY-NDSAEAKIP--------------AVLD-YLGTIIEAECKFLIFAHHQS 579
Query: 614 LLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLAT 673
+L+ + +L+ K + RIDG T R + F K +LS +AGG+G+ L
Sbjct: 580 MLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTDFQNKDDIKAA-VLSIKAGGVGLTLTA 638
Query: 674 ADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKL 728
A VI + W P +QA+DRAHRIGQ V ++ T+++ + + KL
Sbjct: 639 ASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQGKL 693
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 120/209 (57%), Gaps = 5/209 (2%)
Query: 583 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642
E+ GKM L++LL + ++L+FS R+LDILE +L+ KGY + R DG T R
Sbjct: 517 EHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQ 576
Query: 643 ASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQK 702
I+ FN+ S++ VFL+STRAG LG+NL +A+ V+++D WNP DLQAQDR+ R GQ+
Sbjct: 577 LLIDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQR 635
Query: 703 KEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQ--KAVNKDELLQMVRFGAE 760
+ V VFR ++EE + R K L + + G++ ++ + V D+ Q FG
Sbjct: 636 RHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAV-SGKIEKRYFEGVQDDKKFQGELFGIC 694
Query: 761 MVFSS-KDSTITDEDIDRIIAKGEEATAQ 788
+F D T E I+ G+ TA+
Sbjct: 695 NLFRDLSDKLFTSEIIEMHGEHGKGNTAE 723
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 40/306 (13%)
Query: 265 ALDGAGGTRLVSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 324
AL G +V PS I ++ +Q G+ +L LY N G+L D+MGLGKT+QTI+ L
Sbjct: 112 ALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFL 171
Query: 325 GY-----------LHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERN 373
L E R I P +++ P S + NW E + A+ N R+
Sbjct: 172 SAVIGKDNDHGDQLVEGRKI-APILILCPTSVIRNWENEFAEWARCSVAVYHGPN---RD 227
Query: 374 HIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYN 433
+ + + + ++ +TSF+ L SW +++DEAHR+KNE S L
Sbjct: 228 LVLQKVET-QRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEIT 286
Query: 434 TNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWF-----------------QI 476
T R +TGT +QN + EL++L ++++P E F ++ Q+
Sbjct: 287 TRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQV 346
Query: 477 SGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKE-TILKVGMSEMQKQYYRALLQK 535
+ + +H V VL FLLRR K + L KE I+ MS++QK+ YR +LQ+
Sbjct: 347 ADKRKKHLV-----SVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQ 401
Query: 536 -DLEVV 540
D++++
Sbjct: 402 PDVQIL 407
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 120 bits (302), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 108/199 (54%), Gaps = 15/199 (7%)
Query: 585 AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMY------------KGYQYCRI 632
+GKMVLL +L E + L+FSQ LD++E YL +G + RI
Sbjct: 1115 SGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRI 1174
Query: 633 DGNTGGEDRDASIEAFNKPGSEKF-VFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQ 691
DG+T +R +E FN P + + L+STRAG +GINL +A+ VIL D WNP DLQ
Sbjct: 1175 DGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQ 1234
Query: 692 AQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDEL 751
A R R GQ K V +R T+EEK+ +R K L A V+ + +++ + ++K+E+
Sbjct: 1235 AIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVS--RTISKEEM 1292
Query: 752 LQMVRFGAEMVFSSKDSTI 770
L + FG E + ST+
Sbjct: 1293 LHLFEFGDEELLEQSGSTM 1311
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 154/338 (45%), Gaps = 48/338 (14%)
Query: 278 PSCIKGKMRDYQLAGLNWL----------IRLYENGINGILADEMGLGKTLQTISLLGYL 327
PS I K++ +Q++G+ ++ ++ + G ILA MGLGKT Q I+ L +
Sbjct: 708 PSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTV 767
Query: 328 HEFRGIT---GPHMVVAPKSTLGNWMKEIQRFCPV----LRAIKFLGNPE-------ERN 373
R I ++V P + L NW KE ++CP LR P ++
Sbjct: 768 --MRCIQLGLRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVPRANIQYLLKKW 825
Query: 374 HIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRY------IIIDEAHRIKNENSLLSK 427
I+ +L+ G S + ++KT + ++ DEAH IKN + ++
Sbjct: 826 RIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHIIKNRRADTTQ 885
Query: 428 TMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQH---- 483
++ T R+ +TG+PLQNNL E + +++F+ S+ F + FQ EN QH
Sbjct: 886 ALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNST 945
Query: 484 ----EVVQQ----LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQK 535
+++ Q L++ L+ F+ R + V+ LP KK ++ V +S++Q++ YR L
Sbjct: 946 SDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQRKLYRRFLDV 1005
Query: 536 DLEVVNAGGE----RKRLLNIAMQLRKCCNHPYLFQGA 569
+ +A E R L NHP L Q A
Sbjct: 1006 NGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMA 1043
>Os02g0650800
Length = 1439
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 131/532 (24%), Positives = 232/532 (43%), Gaps = 88/532 (16%)
Query: 297 IRLYENGING--ILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQ 354
+R N I G +++ G GKT I+ + F P +++AP+ L W +E +
Sbjct: 906 LRNNANTIEGGCVISHAPGTGKTRLAITFVQSYFAFFPECCP-VIIAPRGMLATWEQEFR 964
Query: 355 RF---CP--VLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWR- 408
++ P VL + + N +E I++ ++ + ++ K + LK SWR
Sbjct: 965 KWKVKVPFHVLNSKEI--NWKEDRTIKQLAIMDENLAQSLARNKLDHKFRRKLKLASWRK 1022
Query: 409 -----------------------------------YIIIDEAHRIKNENSLLSKTMRIYN 433
+++DE H +N+ SL+ K +
Sbjct: 1023 GSSIIGVSYTLFRKLANQSSMDGNMVRNLLLEMPDLLVLDEGHTPRNKKSLIWKVLEEVR 1082
Query: 434 TNYRLLITGTPLQNNLHELWSLLNFLLPEIFS--SAETF------DDWFQISGENDQHEV 485
T R++++GTP QN+ EL ++L + P+ ++++F D W ++ N +
Sbjct: 1083 TKKRIILSGTPFQNSFLELSNVLYLIRPKFARHFASKSFKKIGLEDYWTSLTLNNITEKK 1142
Query: 486 VQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGE 545
+ ++ ++L P + ++K LP +E+++ + QK+ A+ V G
Sbjct: 1143 IDEIRQILDPIVHIHNGDILQKSLPGLRESVVILNPLPHQKEIITAMEN----TVTMG-- 1196
Query: 546 RKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG-----------DHLIENAGKMVL-LDK 593
L+ ++ HP+L A+ T+ + + K VL + +
Sbjct: 1197 ---TLDAEYKISLASIHPFLVTCAKLSEKETSSVDVSLLKSLRPNPCVGVKTKFVLEIVR 1253
Query: 594 LLPKLKERDSRVLIFSQMTRLLDILEDYL--MY---KGYQYCRIDGNTGGEDRDASIEAF 648
L +KER VL+FSQ L ++ D L M+ +G + + GN ++R+A +EAF
Sbjct: 1254 LCEAMKER---VLVFSQYLEPLSLIMDQLSKMFNWIEGEEILLMSGNVLVQNREALMEAF 1310
Query: 649 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVF 708
N S V L ST+A GI L A V+L D WNP V QA RA+RIGQ+K V +
Sbjct: 1311 NDMKSNAKVMLASTKACCEGITLIGASRVVLLDVVWNPSVGRQAIGRAYRIGQEKIVYTY 1370
Query: 709 RFCTEYTIEEKVIERAYKKLALDALVIQQ-----GRLAEQKAVNKDELLQMV 755
TE T E+ +R KK + L+ + G Q+ + D++L+ +
Sbjct: 1371 NLITEGTKEKDKYDRQAKKDHMSKLLFSKEPHAAGFNLSQEVIFNDKILEAM 1422
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 146/318 (45%), Gaps = 45/318 (14%)
Query: 306 GILADEMGLGKTLQTISLLGYLHEFRG----------------------ITGPHMVVAPK 343
GILAD MGLGKT+ TI+L+ L RG + G +++ P
Sbjct: 79 GILADAMGLGKTVMTIALI--LSNPRGELEQDKRGTRDRDTKAQTSRSSVRGGTLIICPM 136
Query: 344 STLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSF---EMAIKE-- 398
+ LG W E++ F+ +R +L + V +T++ + A K
Sbjct: 137 ALLGQWKDELEAHSTPGALSVFVYYGGDRT---TDLRFMAQHSVVLTTYGVLQSAHKNDG 193
Query: 399 KTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNF 458
+ R W +++DEAH IK+ + ++ ++ R +TGTPLQNNL +L+SLL F
Sbjct: 194 SSIFHRIDWYRVVLDEAHTIKSPRTKAARAAYELTSHCRWCLTGTPLQNNLEDLFSLLCF 253
Query: 459 LLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKG------LPPK 512
L E + A ++ Q EN ++ + +LRP +LRR K +K LPP
Sbjct: 254 LHVEPWGDASWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKDKMGNPILVLPPA 313
Query: 513 KETILKVGMSEMQKQYYRALLQKD---LEVVNAGGE----RKRLLNIAMQLRKCCNHPYL 565
I++ SE ++ +Y AL ++ + A G +L + ++LR+CC+HP+L
Sbjct: 314 NIEIVECEQSEDERDFYEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPFL 373
Query: 566 FQGAEPGPPYTTGDHLIE 583
YT D L +
Sbjct: 374 VISRADTQKYTDLDELAQ 391
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 583 ENAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642
+++ K++ L K+L L+E+ + ++FSQ T D+LE KG ++ R DG + R+
Sbjct: 495 KDSCKVIKLIKILEGLQEKREKSIVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHRE 554
Query: 643 ASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQK 702
++ F++ +K V L+S +AGG+G+NL A V L D WNP V+ QA R HRIGQK
Sbjct: 555 KVLKEFSE-SKDKLVLLMSLKAGGVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQK 613
Query: 703 KEVQVFRFCTEYTIEEKV 720
+ VQV RF + T+EE++
Sbjct: 614 RAVQVRRFIVKDTVEERM 631
>Os05g0392400 SNF2-related domain containing protein
Length = 450
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 176/373 (47%), Gaps = 70/373 (18%)
Query: 410 IIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP---EIFSS 466
+++DE H +NE S++ KT+ T R++++GTP QNN EL+++L + P E+F +
Sbjct: 31 LVLDEGHTPRNERSVIWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLT 90
Query: 467 A--------------ETFDD------WFQISGENDQHEVVQQLHKVLRPF-------LLR 499
+ F D W ++ N + +++ +L+PF +LR
Sbjct: 91 KTRVGRRHCVSKKQRDKFSDKYEKGVWASLTS-NVTDDNAEKVRSILKPFVHIHNGTILR 149
Query: 500 RLKS-----DVEKGLPPKKETILKV----GMSEMQKQYYRALLQKDLEVVNAGG---ERK 547
L V K LP +K I KV + + +Y +L +VNA E
Sbjct: 150 TLPGLRECVIVLKPLPLQKSIIRKVENVGSGNNFEHEYVISLASTHPSLVNAINMTEEEA 209
Query: 548 RLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVL-LDKLLPKLKERDSRVL 606
L++ M L + ++PY +G + + V+ + +L LKE+ VL
Sbjct: 210 SLIDKPM-LERLRSNPY--EGVK---------------TRFVMEVVRLCEALKEK---VL 248
Query: 607 IFSQMTRLLDILEDYL--MYK---GYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLS 661
IFSQ + L++++++L ++K G + ++DG R SIE FN P S+ V L S
Sbjct: 249 IFSQFIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNNPDSDARVLLAS 308
Query: 662 TRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVI 721
TRA GI+L A V+L D WNP V QA RA RIGQKK V + T T E
Sbjct: 309 TRACCEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKY 368
Query: 722 ERAYKKLALDALV 734
+R +K L LV
Sbjct: 369 DRQAEKDHLSKLV 381
>Os07g0598300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1158
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 221/488 (45%), Gaps = 70/488 (14%)
Query: 274 LVSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGI 333
L+ P ++ + +QL G+ + +R + + +ADEMGLGKTLQ I++ +
Sbjct: 179 LMKLPQHLRDALLPFQLEGVKFGLRRHGRCL---IADEMGLGKTLQAIAIACCYKD---- 231
Query: 334 TGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVC----V 389
GP ++V P W +E++R+ P FL P++ + + + + C V
Sbjct: 232 EGPVLIVCPAVLRYTWAEELERWDP-----SFL--PKDIHLVFGHQDSLERLGACPKAVV 284
Query: 390 TSFEMAIKEKTALKRFSWRYIIIDEAHRI-----KNENSLLSKTMRIY-NTNYRLLITGT 443
S++M + + ++ W +IIDE+H I K+E + + + N + +L++GT
Sbjct: 285 ISYQMLSRLRKSMMNRRWALMIIDESHNIRCTKKKHEKNETQAVLELAPNVSRIVLLSGT 344
Query: 444 PLQNNLHELWSLLNFLLPEIFSS-----AETFDDWFQISGEN-------DQHEVVQQLHK 491
P + +++ +N L P + S A + + G N + + +L+
Sbjct: 345 PSLSRPFDIYHQINMLWPHLLGSNKFDFANKYCLLHTVQGCNGRTYQDFSKGARLTELNV 404
Query: 492 VL-RPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQ---------------- 534
+L + ++RRLK + LPPK+ I+ + ++ + + ++
Sbjct: 405 LLSQTLMIRRLKEHLLNELPPKRRQIIWLKLNASDIKTAISCIKGVNTSDEIPTIASPDN 464
Query: 535 -KDLEVVN---AGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVL 590
D E VN A G +K N+ Q P + + +++
Sbjct: 465 SNDSEEVNMEEADGCKKSPRNLTTQEIGIVKIPGFSE-------WFLNHFIMKEPADNGS 517
Query: 591 LDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNK 650
LD + + +IF+ ++LD ++ ++ + +Y RIDG+T +R ++++F +
Sbjct: 518 LDS-----QSNCQKTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGSTSPRERKDAVDSF-R 571
Query: 651 PGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRF 710
E V ++ AGG+G++ ++A V+ + + LQA+DRAHR GQ V ++ F
Sbjct: 572 LNPEVMVAIIGITAGGVGLDFSSAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIF 631
Query: 711 CTEYTIEE 718
C T++E
Sbjct: 632 CARNTLDE 639
>Os02g0527100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 810
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 64/324 (19%)
Query: 306 GILADEMGLGKTLQTISLL---------------GYLHEFRG------------------ 332
GILAD MGLGKT+ TI+LL E G
Sbjct: 198 GILADAMGLGKTIMTIALLLADSSKGCITTQHSTHICEEASGLGELPVQPHDDVKKLAIP 257
Query: 333 -------------ITGPHMVVAPKSTLGNWMKEIQRFC---PVLRAIKFLGN-PEERNHI 375
I G +++V P + LG W EI+ V + + N P+E N I
Sbjct: 258 FSFSKLRKPKTPLIAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLI 317
Query: 376 RENLLVPGKFDVCVTSFEMA-IKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNT 434
++ +V + V + F E L W +++DEAH IK+ SL+S
Sbjct: 318 GQSDIVLTTYGVLSSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKSLISLAAAALTA 377
Query: 435 NYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGENDQHEVVQQLHKVLR 494
+ R +TGTP+QNNL +++SL FL E + + + Q E ++ + +L+
Sbjct: 378 DRRWCLTGTPIQNNLEDIYSLFRFLRVEPWRNWSLWHKLVQKPYEEGDERGLKLVQSILK 437
Query: 495 PFLLRRLKSDVEKG------LPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKR 548
P +LRR K+ +K LPP + +SE +K +Y AL ++ + E+ R
Sbjct: 438 PIMLRRNKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDALFRRSKVKFDQFVEQGR 497
Query: 549 LLN-------IAMQLRKCCNHPYL 565
+L+ + ++LR+CC+HP+L
Sbjct: 498 VLHNYASILELLLRLRQCCDHPFL 521
Score = 93.6 bits (231), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 89/159 (55%), Gaps = 3/159 (1%)
Query: 585 AGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDAS 644
+ K+ L + L L+ ++ +IFSQ T LD+L+ L + + R+DG + R+
Sbjct: 643 SSKISFLLQELEVLRTSGAKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKV 702
Query: 645 IEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKE 704
I+ F++ S V L+S +AGG+GINL A + D WNP V+ QA R HRIGQ K
Sbjct: 703 IKEFSEDKS-ILVLLMSLKAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKS 761
Query: 705 VQVFRFCTEYTIEEKV--IERAYKKLALDALVIQQGRLA 741
V + RF + T+EE++ ++ +++ AL Q+ R A
Sbjct: 762 VSIKRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSA 800
>AK110250
Length = 1046
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 161/362 (44%), Gaps = 77/362 (21%)
Query: 277 QPSCIKGKMRDYQLAGLNWLIRLYENGI--NGILADEMGLGKTLQTISLLGYLHEFRGIT 334
QP+ + K+ +Q GL+W+ R E G G+LADEMG+GKT+Q ISL+
Sbjct: 423 QPAGLNIKLLPFQREGLSWMTR-QEQGTWKGGMLADEMGMGKTIQMISLM-----LSDRK 476
Query: 335 GPHMVVAPKSTLGNWMKEIQRFC-PVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFE 393
P +VVAP + W EI+++ P L+ + + G P +++E V DV +TS+
Sbjct: 477 KPCLVVAPTVAIMQWRNEIEQYTEPKLKVLLWHG-PNRTQNLKELKAV----DVVLTSYA 531
Query: 394 M-----------------AIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNY 436
+ +KEK+AL WR II+DEAH IK ++ +K ++
Sbjct: 532 VLESSFRKQESGFRRKNEILKEKSALHAVHWRRIILDEAHNIKERSTNTAKGAFALQGDF 591
Query: 437 RLLITGTPLQNNLHELWSLLNFLLPEIF-----------SSAETFDDWFQI--SGENDQH 483
R ++GTPLQN + EL+S++ FL + F S +F D G H
Sbjct: 592 RWCLSGTPLQNRVGELYSMIRFLGGDPFAYYFCKKCPCKSLHWSFSDKRNCDSCGHTPMH 651
Query: 484 EVVQQLHKVLRPF------------LLRRLKSDVEK--------------GLPPKKETIL 517
+++L+P RRL+ +E+ GLPP+ +
Sbjct: 652 HTCYWNNEILKPIQRSGAQHGEGRDAFRRLRILLERMMLRRTKLERADDMGLPPRTIEVR 711
Query: 518 KVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLN-------IAMQLRKCCNHPYLFQGAE 570
+ +E ++ Y +L + ++ +LN + ++R+ NHP L ++
Sbjct: 712 RDLFNEEEEDLYTSLYTDTTRKFSTYLDQGTVLNNYSNIFTLLTRMRQLANHPDLVLRSK 771
Query: 571 PG 572
G
Sbjct: 772 TG 773
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 87/149 (58%), Gaps = 3/149 (2%)
Query: 584 NAGKMVLLDKLLPKLKERDSRV--LIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDR 641
++ K+ L + L +L+ D + L+FSQ LD++ L G+Q CR++GN E R
Sbjct: 873 SSTKIEALVEELTQLRSEDKTIKSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEAR 932
Query: 642 DASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQ 701
+ +I+ F + VFL+S +AGG+ +NL A V L D WNP V++QA DR HR+G+
Sbjct: 933 NRTIKHFME-NPNVTVFLVSLKAGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGR 991
Query: 702 KKEVQVFRFCTEYTIEEKVIERAYKKLAL 730
+ + V R E +IE ++IE KK A+
Sbjct: 992 HRPIIVKRMVIENSIESRIIELQNKKSAM 1020
>Os01g0636700 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 469
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 132/273 (48%), Gaps = 28/273 (10%)
Query: 278 PSCIKGKMRDYQLAGLNWLIRLY-ENGINGILADEMGLGKTLQTISLLGYLHEFRGITGP 336
PS I + +Q GL WL RL+ E GILAD+MGLGKT Q + L L + +T
Sbjct: 199 PSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLF-YSDLTQR 257
Query: 337 HMVVAPKSTLGNWMKEIQRFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMA- 395
++VAP + L W+ E+ + I + R+ +L G V + ++++
Sbjct: 258 VLIVAPGTILHQWIAELTKVGFNEDLIHSFWCAKTRHDSLAQVLKEG--GVLLITYDLVR 315
Query: 396 --------IKEKTALKR---FSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTP 444
+ K++ R SW Y+I+DE H +KN N+ + ++ + +++TGTP
Sbjct: 316 LYNEELNGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAAALKSLSRGQTVVLTGTP 375
Query: 445 LQNNLHELWSLLNFLLPEIFSSAETFDDWF--QISGEN---DQHEVV-------QQLHKV 492
+QNNL E SL++ P + S F+ F I N EVV + K+
Sbjct: 376 VQNNLSEFHSLMSLCCPTVLGSLAAFERDFCKPIDMGNVLEATTEVVMISSKKAMEFRKM 435
Query: 493 LRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQ 525
+RP+ LRR K +E LP K + ++ + ++ Q
Sbjct: 436 VRPYFLRRTKESIESLLPNKADLVIWLKLTPYQ 468
>Os07g0642400 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 821
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 6/176 (3%)
Query: 585 AGKMVLLDKLLPKLKERD--SRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRD 642
+ K+ L KLL + + D S+ +IFSQ ++L +LE L G+ R+DG+ + R
Sbjct: 644 SSKVQALLKLLRRSQSEDPLSKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRS 703
Query: 643 ASIEAFNKPGSEK-FVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQ 701
I F G + V L S +A G G+NL A V L+D WNP V+ QA DR HRIGQ
Sbjct: 704 EVIRQFGCVGPDSPTVLLASLKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQ 763
Query: 702 KKEVQVFRFCTEYTIEEKVIE--RAYKKLALDALVIQQGRLAEQKAVNKDELLQMV 755
KEV+V R + +IEE+++E KKL A ++G E K + +EL M+
Sbjct: 764 TKEVKVVRLIVKDSIEERMLELQERKKKLISGAFGRKKGG-KEHKEIRVEELQMMM 818
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 48/297 (16%)
Query: 305 NGILADEMGLGKTLQTISLLGYLHEFRGITG--------------------PHMVVAPKS 344
GI AD+MGLGKTL +SL+G + R + G +VV P S
Sbjct: 242 GGIFADDMGLGKTLTLLSLIGR-SKARNVGGKKARGAKRRKVEEAVEEESRTTLVVCPPS 300
Query: 345 TLGNWMKEIQRFCPV--LRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKE---- 398
+W+ +++ L+ + G ER ++ LL K+D+ +T++ +E
Sbjct: 301 VFSSWVTQLEEHTKTGSLKVYLYHG---ERTKEKKELL---KYDIVITTYSTLGQELEQE 354
Query: 399 KTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNF 458
+ +K W +I+DEAH IKN + +K + N R ++TGTP+QN+ +L+ L+ F
Sbjct: 355 GSPVKEIEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPIQNSSFDLYPLMAF 414
Query: 459 LLPEIFSSAETFDDWFQISGENDQHEV-VQQLHKVLRPFLLRRLKSDVEKG------LPP 511
L + FS + Q+ E + + + +L +L LRR K + E G +PP
Sbjct: 415 LRFQPFSIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTK-ETESGSKSLVSIPP 473
Query: 512 KKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLN-------IAMQLRKCCN 561
K + +S +++YY + + + G+R +L ++LR+ CN
Sbjct: 474 KTVLACYIELSAEEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCN 530
>Os07g0434500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 909
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 130/526 (24%), Positives = 227/526 (43%), Gaps = 86/526 (16%)
Query: 284 KMRDYQLAGLNWLIR-LYENGING-ILADEMGLGKTLQTISLL-GYLHEFRGITGPHMVV 340
+MR +QL G ++L++ L + G ILA G GKT IS + +L ++ + +VV
Sbjct: 367 QMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYP--SARPLVV 424
Query: 341 APKSTLGNWMKEIQRF----CPV-----------LRAIKFLGNPEERNHI------RENL 379
PK LG W +E QR+ P+ ++ L + E R I + +
Sbjct: 425 LPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRTEQLEVLKSWEARMSILFLGYKQFSR 484
Query: 380 LVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLL 439
++ G D + + A +++ + +I+DE H +N + + +++ T +++
Sbjct: 485 IICGDGDGNIAA---ACRDRLLMVP---NLLILDEGHTPRNRETDVLASLKRVQTPRKVV 538
Query: 440 ITGTPLQNNLHELWSLLNFLLPE----------------------IFSSAETFDDWFQIS 477
++GT QN++ E++++L+ + P+ I S D F S
Sbjct: 539 LSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTES 598
Query: 478 GE----NDQH-----EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQY 528
E ND + V++ L ++ + +L K D+ LP + + + +S QK+
Sbjct: 599 VEDTLLNDDNFTRKSHVIRSLRELTKD-VLHYYKGDILDELPGLVDFSVFLKLSTKQKEI 657
Query: 529 YRALLQKDLEVVNAGGERKR-LLNIAMQLRKCCNHPYLFQGAEPGPPYT--TGDHLIE-- 583
+ + A + KR + A+ + C + A+ T T D LIE
Sbjct: 658 --------VHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRATNLTDATVDSLIESI 709
Query: 584 ---NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-----YKGYQYCRIDGN 635
+ K +L ++L FSQ + LE L+ + G + I G+
Sbjct: 710 IIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGD 769
Query: 636 TGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 695
T +DR+ +++ FN K +F S +A G GI+L A VI+ D NP V QA R
Sbjct: 770 TSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGR 828
Query: 696 AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA 741
A R GQ+K+V V+R + E K E A+KK + L + L
Sbjct: 829 AFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELC 874
>Os06g0255700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 946
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 129/526 (24%), Positives = 228/526 (43%), Gaps = 86/526 (16%)
Query: 284 KMRDYQLAGLNWLIR-LYENGING-ILADEMGLGKTLQTISLL-GYLHEFRGITGPHMVV 340
+MR +QL G ++L++ L + G ILA G GKT IS + +L ++ + +VV
Sbjct: 404 QMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYP--SARPLVV 461
Query: 341 APKSTLGNWMKEIQRF----CPV-----------LRAIKFLGNPEERNHI------RENL 379
PK LG W +E QR+ P+ + ++ L + E + I + +
Sbjct: 462 LPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSILFLGYKQFSR 521
Query: 380 LVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLL 439
++ G D + + A +++ + +I+DE H +N + + +++ T +++
Sbjct: 522 IICGDGDGNIAA---ACRDRLLMVP---NLLILDEGHTPRNRETDVLASLKRVQTPRKVV 575
Query: 440 ITGTPLQNNLHELWSLLNFLLPE----------------------IFSSAETFDDWFQIS 477
++GT QN++ E++++L+ + P+ I S D F S
Sbjct: 576 LSGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTES 635
Query: 478 GE----NDQH-----EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQY 528
E ND + V++ L ++ + +L K D+ LP + + + +S QK+
Sbjct: 636 VEDTLLNDDNFTRKAHVIRSLRELTKD-VLHYYKGDILDELPGLVDFSVFLKLSTKQKEI 694
Query: 529 YRALLQKDLEVVNAGGERKR-LLNIAMQLRKCCNHPYLFQGAEPGPPYT--TGDHLIE-- 583
+ + A + KR + A+ + C + A+ T T D LIE
Sbjct: 695 --------VHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESI 746
Query: 584 ---NAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLM-----YKGYQYCRIDGN 635
+ K +L ++L FSQ + LE L+ + G + I G+
Sbjct: 747 IIKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGD 806
Query: 636 TGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR 695
T +DR+ +++ FN K +F S +A G GI+L A VI+ D NP V QA R
Sbjct: 807 TSADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGR 865
Query: 696 AHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA 741
A R GQ+K+V V+R + E K E A+KK + L + L
Sbjct: 866 AFRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELC 911
>Os01g0779400 SWAP/Surp domain containing protein
Length = 1213
Score = 94.0 bits (232), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Query: 604 RVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 663
+ ++FSQ TR+LD++E +L Y R+DG RD +++ FN E V ++S +
Sbjct: 1060 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNT-NPEVSVMIMSLK 1118
Query: 664 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 723
A LG+N+ A V+L D WNP + QA DRAHRIGQ + V V R + T+E++++
Sbjct: 1119 AASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 1178
Query: 724 AYKK 727
KK
Sbjct: 1179 QEKK 1182
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 17/192 (8%)
Query: 393 EMAIKEKTALKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHEL 452
E + EK L + +W +I+DEA IKN + +++ R ++GTP+QN + +L
Sbjct: 698 ESKLPEK-PLAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDL 756
Query: 453 WSLLNFLLPEIFSSAETFDDWFQISGENDQHEVV--QQLHKVLRPFLLRRLKSDVEKG-- 508
+S FL + ++ + F F I ++ + ++L VL+ +LRR K+ + G
Sbjct: 757 YSYFRFLRYDPYAEYKKF--CFMIKTPISRNPITGYKKLQVVLKTVMLRRTKATMLDGKP 814
Query: 509 ---LPPKKETILKVGMSEMQKQYYRALLQKDL----EVVNAGGERKRLLNI---AMQLRK 558
LPPK ++ V + ++ +Y L + E AG ++ +NI ++LR+
Sbjct: 815 IISLPPKTVSLKTVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLRLRQ 874
Query: 559 CCNHPYLFQGAE 570
C+HP+L +G E
Sbjct: 875 ACDHPHLVRGHE 886
>Os07g0511500 SNF2-related domain containing protein
Length = 635
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 3/123 (2%)
Query: 606 LIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAF-NKPGSEKFVFLLSTRA 664
++FSQ T LD++E L G + +++G ++ +I+ F N P +FL+S +A
Sbjct: 486 IVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPDCR--IFLMSLKA 543
Query: 665 GGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERA 724
GG+ +NL A V L D WNP V+ QAQDR HRIGQ K ++ RF + T+EE++++
Sbjct: 544 GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQLQ 603
Query: 725 YKK 727
KK
Sbjct: 604 EKK 606
>Os03g0165266 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1078
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 135/541 (24%), Positives = 224/541 (41%), Gaps = 98/541 (18%)
Query: 264 DALDGAGGTRLVSQPS--CIKGK----MRDYQLAGLNWLIR--LYENGING-ILADEMGL 314
DA+D G L P C+ + M+ +Q+ G N+L++ EN G ILA G
Sbjct: 506 DAIDKTSGAILEVVPDALCLHPQHSQHMKPHQVEGFNFLVKNLADENNPGGCILAHAPGS 565
Query: 315 GKTLQTISLLGYLHEF--RGITGPHMVVAPKSTLGNWMKEIQRF----CPVL-------- 360
GKT IS ++H F + G +++ PK L W E + P+
Sbjct: 566 GKTFLIIS---FVHSFLAKYPAGRPLIILPKGILSTWRTEFLHWQVDDIPLYDFYSSKAD 622
Query: 361 ---RAIKFLGNPEERNHIRENLLVPGKFDVCVTS-----FEMAIKEKTALKRFSWRYIII 412
+K L EE I LL+ + C+ S E + ++ LK S +I+
Sbjct: 623 KRSEQLKVLNLWEESRSI---LLLGYQQFACIVSDHTSDTEAIMCQEKLLKVPS--LVIL 677
Query: 413 DEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLL---------------- 456
DE H +NE + L ++ T +++++GT QN++ E++++L
Sbjct: 678 DEGHTPRNEETDLLTSLENIRTPRKVVLSGTLFQNHVREVFNILKLVRSKFLKMDKSRAI 737
Query: 457 -NFLLPEI-----------FSSAETFD---DWFQISGENDQHEVVQQLHKVLRPFLLRRL 501
N +L ++ S + FD + Q G + V+ Q + L +L
Sbjct: 738 VNCILSKVDLMGKSARSKNISDKDFFDLVQEHLQKDGNDKMRAVIIQNLRELTADVLHYY 797
Query: 502 KSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVVNAGGERKRLLNIAMQLRKCCN 561
+ + LP + + + MS Q+ + K L+ +N +R R +++
Sbjct: 798 QGKLLDELPGIVDFTVFLNMSSKQEH-----IIKGLDGINKFAKRSRCNAVSL------- 845
Query: 562 HPYLFQG----AEPG-----PPYTTGDHLIENAG-KMVLLDKLLPKLKERDSRVLIFSQM 611
HP L A+ G + + N G K + LL + +VL+FSQ
Sbjct: 846 HPCLKNANKADADDGNVTNRKIGSIISGIDINDGVKAKFVHNLLSLSEATGGKVLVFSQY 905
Query: 612 TRLLDILEDYLM-YKGYQ----YCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGG 666
R L LE + KG++ R+ G + + R+ ++ FN + VF S +A G
Sbjct: 906 VRSLIFLEKLVSRMKGWKSEVHIFRVTGGSTQDQREQAVHRFNNSPDAR-VFFGSIKACG 964
Query: 667 LGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYK 726
GI+L A +++ D NP V QA RA+R GQ K V +R + EE A+K
Sbjct: 965 EGISLVGASRIVILDVHENPSVMRQAIGRAYRPGQSKMVYCYRLVAADSPEEDDHHTAFK 1024
Query: 727 K 727
K
Sbjct: 1025 K 1025
>Os08g0180300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1030
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 604 RVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 663
+ ++FSQ T +LD+LE L QY R+DG RD +++ FN E V ++S +
Sbjct: 877 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNT-DPEVRVMIMSLK 935
Query: 664 AGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 723
AG LG+N+ A VIL D WNP + QA DRAHRIGQ + V V R + T+E++++
Sbjct: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
Query: 724 AYKKLAL 730
+K A+
Sbjct: 996 QEEKRAM 1002
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 402 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 461
+ R W +++DEA IKN + ++K R ++GTP+QN + EL+S +FL
Sbjct: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY 600
Query: 462 EIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETI 516
+ +S+ +F + + ++L VLR LLRR K + G LPPK +
Sbjct: 601 DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL 660
Query: 517 LKVGMSEMQKQYYRALLQKD---LEVVNAGGERKR----LLNIAMQLRKCCNHPYLFQGA 569
KV ++ ++ +Y L ++ + A G K+ +L + ++LR+ C+HP L +G
Sbjct: 661 DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKGH 720
Query: 570 EPGPPYTTGDHLIENAGKMV--LLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYK-G 626
+ GD IE A ++ ++ LL KL+ V F + D+ ED ++ G
Sbjct: 721 Q---SEYKGDGSIEMAKQLPKEMIINLLAKLE-----VGEFCSVCS--DVPEDAVVTMCG 770
Query: 627 YQYC 630
+ +C
Sbjct: 771 HVFC 774
>Os04g0629300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1051
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 402 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 461
L R W +++DEA IKN N+ +++ R ++GTP+QN + +L+S FL
Sbjct: 560 LARVRWFRVVLDEAQTIKNHNTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 619
Query: 462 EIFSSAETFDDWFQISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETI 516
E +S +F + D ++L VL+ LLRR K + G LPPK +
Sbjct: 620 EPYSVYGSFRSMIKYQISRDATRGYKKLQAVLKIVLLRRTKETLIDGEPIIKLPPKTIQL 679
Query: 517 LKVGMSEMQKQYYRAL----LQKDLEVVNAGGERKRLLNI---AMQLRKCCNHPYLFQGA 569
K+ S+ ++ +Y L +K E +AG R+ NI ++LR+ C+HP L +G
Sbjct: 680 SKIDFSKEERTFYMMLEEGSREKFKEYASAGTIRENFANILVLLLRLRQACDHPLLLKGK 739
Query: 570 E 570
E
Sbjct: 740 E 740
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 74/125 (59%), Gaps = 1/125 (0%)
Query: 603 SRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLST 662
S+ ++FSQ T LLD+LE L ++ R+DG R+A++ FN E V L+S
Sbjct: 897 SKAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNT-DPEVRVMLMSL 955
Query: 663 RAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIE 722
+AG LG+N+ A VI+ D WNP + QA DRAHRIGQ + V V R + T+E++++
Sbjct: 956 KAGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILA 1015
Query: 723 RAYKK 727
KK
Sbjct: 1016 LQEKK 1020
>Os09g0442700 SNF2-related domain containing protein
Length = 86
Score = 80.1 bits (196), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 414 EAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDW 473
+ HR+KN LL + ++ + +LL+TGTPLQNNL ELWSLLNF+LP+IFSS + F+ W
Sbjct: 22 QGHRLKNSKCLLLRELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESW 81
Query: 474 F 474
+
Sbjct: 82 Y 82
>Os04g0692750 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 204
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 11/155 (7%)
Query: 308 LADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVLRAIKFLG 367
L D+MGLGKT+Q + L L R I +VVAPK+ L +W KE+ + + G
Sbjct: 1 LGDDMGLGKTMQVSAFLAGLFHSRLIKRV-LVVAPKTLLTHWTKELSVVSLKDKIRDYSG 59
Query: 368 -NPEERNH-----IRENLLVPGKFDVCVTSFEMAIKEKTA----LKRFSWRYIIIDEAHR 417
N RN+ +E ++ +D+ +F+M T + W Y+I+DE H
Sbjct: 60 PNANARNYELKYAFKEGGILLTTYDIVRNNFKMIKGNFTNDFDDEEETLWNYVILDEGHI 119
Query: 418 IKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHEL 452
IKN + ++++ +R++I+GTP+QNNL EL
Sbjct: 120 IKNPKTQRAQSLFEIPCAHRIVISGTPIQNNLKEL 154
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,390,088
Number of extensions: 1277989
Number of successful extensions: 3622
Number of sequences better than 1.0e-10: 33
Number of HSP's gapped: 3520
Number of HSP's successfully gapped: 45
Length of query: 1158
Length of database: 17,035,801
Length adjustment: 112
Effective length of query: 1046
Effective length of database: 11,187,833
Effective search space: 11702473318
Effective search space used: 11702473318
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 162 (67.0 bits)