Os10g0457700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, FYVE/PHD-type domain containing protein.
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Os10g0457700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, FYVE/PHD-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.67 | 0.224 | 9.25 | 0.17 | 0.511 | -0.533 | -0.108 | 3.4 | 0.203 | 7.61 | 0.7459 | 7612 | -- | -- |
| 24.11 | 0.229 | 9.32 | -0.0566 | 0.524 | 0.393 | -0.0693 | -- | 0.217 | 7.66 | 0.8651 | 4562 | -- | -- |
| 22.7 | 0.222 | 9.25 | 0.169 | 0.511 | -0.539 | -- | 3.43 | 0.203 | 7.66 | 0.7462 | 7625 | -- | -- |
| 24.13 | 0.229 | 9.32 | -0.0586 | 0.519 | 0.391 | -- | -- | 0.22 | 7.69 | 0.8501 | 4512 | -- | -- |
| 36.52 | 0.281 | 9.26 | 0.211 | -- | -0.712 | -- | 4.04 | 0.2 | -- | 0.828 | 7480 | -- | -- |
| 26.82 | 0.243 | 9.32 | 0.0583 | 0.518 | -- | -0.105 | -- | 0.195 | 7.6 | -- | -- | -- | -- |
| 26.85 | 0.243 | 9.32 | 0.0559 | 0.517 | -- | -- | -- | 0.195 | 7.64 | -- | -- | -- | -- |
| 38.48 | 0.289 | 9.33 | -0.052 | -- | 0.397 | -- | -- | 0.226 | -- | 0.8998 | 4193 | -- | -- |
| 24.21 | 0.229 | 9.32 | -- | 0.518 | 0.368 | -- | -- | 0.223 | 7.7 | 0.898 | 4560 | -- | -- |
| 41.23 | 0.3 | 9.34 | 0.063 | -- | -- | -- | -- | 0.203 | -- | -- | -- | -- | -- |
| 26.93 | 0.243 | 9.33 | -- | 0.518 | -- | -- | -- | 0.189 | 7.63 | -- | -- | -- | -- |
| 38.29 | 0.288 | 9.33 | -- | -- | 0.347 | -- | -- | 0.234 | -- | 0.8342 | 6990 | -- | -- |
| 41.34 | 0.3 | 9.34 | -- | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 12 |
| 2 | 22.67 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 9 | 22.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 9 |
| 16 | 22.78 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 15 | NA |
| 19 | 22.80 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 16 |
| 20 | 22.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 16 |
| 29 | 22.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 5 |
| 31 | 22.83 | wind | 3.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 42 | 22.84 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 47 | 22.84 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 107 | 22.92 | wind | 3.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 113 | 22.93 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 114 | 22.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 120 | 22.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 123 | 22.94 | wind | 3.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 153 | 22.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 8 |
| 154 | 22.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 157 | 22.96 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 19 | 14 |
| 158 | 22.96 | wind | 5.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 160 | 22.96 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 162 | 22.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 8 |
| 175 | 22.97 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 185 | 22.98 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 23 | 10 |
| 189 | 22.98 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 190 | 22.98 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 200 | 22.99 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 1 | 8 |
| 206 | 22.99 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 11 | 2 |
| 210 | 22.99 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 223 | 22.99 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 234 | 23.00 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 2 |
| 243 | 23.00 | atmosphere | 995.0 | 14400 | > th | dose dependent | sin | 1 | NA |
| 245 | 23.00 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 0 | NA |
| 247 | 23.00 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 324 | 23.01 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 4 | 5 |
| 337 | 23.01 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 338 | 23.01 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 343 | 23.01 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 412 | 23.02 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 431 | 23.02 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 633 | 23.03 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 11 | 21 |
| 647 | 23.03 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 18 | 21 |
| 709 | 23.04 | atmosphere | 995.0 | 14400 | > th | dose dependent | no | NA | NA |
| 712 | 23.04 | atmosphere | 1015.0 | 14400 | < th | dose dependent | no | NA | NA |
| 716 | 23.04 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 818 | 23.04 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 18 | 19 |
| 826 | 23.04 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 11 | 20 |
| 832 | 23.04 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 10 | 21 |
| 835 | 23.04 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 14 | 21 |
| 847 | 23.04 | atmosphere | 995.0 | 14400 | > th | dose dependent | rect. | 8 | 22 |
| 915 | 23.05 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 22 | 4 |