BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0110500 Os05g0110500|AK066175
(591 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0110500 Similar to RNA helicase (Fragment) 1150 0.0
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 230 2e-60
Os03g0669000 Similar to RNA helicase (Fragment) 197 1e-50
Os12g0481100 Similar to RNA helicase 189 7e-48
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 183 3e-46
Os07g0660000 182 6e-46
Os02g0150100 Similar to DEAD-box protein abstrakt 180 2e-45
Os02g0826100 Similar to RNA helicase (Fragment) 179 6e-45
Os01g0618400 Similar to RNA helicase (Fragment) 178 1e-44
Os01g0618500 Similar to RNA helicase (Fragment) 176 4e-44
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 173 3e-43
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 172 9e-43
Os01g0549400 Similar to RNA helicase-like protein DB10 169 5e-42
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 169 7e-42
AK107287 168 9e-42
Os01g0172200 WW/Rsp5/WWP domain containing protein 162 8e-40
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 157 2e-38
Os03g0805200 Similar to RNA helicase (Fragment) 155 1e-37
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 155 1e-37
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 155 1e-37
AK111212 153 4e-37
AK110107 153 4e-37
Os11g0599500 Similar to RNA helicase (Fragment) 153 4e-37
Os03g0827700 Similar to ATP-dependent RNA helicase 152 1e-36
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 151 2e-36
Os11g0689400 WW/Rsp5/WWP domain containing protein 150 2e-36
Os06g0535100 Similar to Helicase pitchoune (Fragment) 150 3e-36
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 146 4e-35
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 145 8e-35
Os07g0301200 Similar to RNA helicase (Fragment) 139 8e-33
Os04g0533000 Similar to RNA helicase (Fragment) 139 8e-33
Os02g0641800 Similar to RNA helicase (Fragment) 135 7e-32
AK119751 135 1e-31
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 134 1e-31
Os01g0549700 Similar to RNA helicase (Fragment) 134 2e-31
Os04g0510400 Similar to RNA helicase (Fragment) 132 1e-30
Os09g0520700 Similar to RNA helicase 131 1e-30
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 130 2e-30
Os10g0503700 Similar to RNA helicase (Fragment) 130 4e-30
Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment) 128 1e-29
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 128 2e-29
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 127 3e-29
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 126 5e-29
Os03g0728800 Similar to RNA helicase (Fragment) 121 2e-27
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 121 2e-27
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 119 6e-27
Os06g0697200 DEAD/DEAH box helicase domain containing protein 108 1e-23
Os07g0517000 DEAD/DEAH box helicase domain containing protein 99 9e-21
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 91 2e-18
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 75 1e-13
AK063048 74 4e-13
Os02g0201900 DEAD/DEAH box helicase domain containing protein 69 1e-11
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 1150 bits (2974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/569 (97%), Positives = 557/569 (97%)
Query: 1 MAKKLGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMS 60
MAKKLGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMS
Sbjct: 1 MAKKLGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMS 60
Query: 61 GQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQ 120
GQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQ
Sbjct: 61 GQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQ 120
Query: 121 LVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVF 180
LVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVF
Sbjct: 121 LVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVF 180
Query: 181 DEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKI 240
DEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKI
Sbjct: 181 DEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKI 240
Query: 241 SLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVK 300
SLKNPVMIGLDEQNSSAHGKNHT KHNVTVEQAVDDFKLPAQLVQRYVK
Sbjct: 241 SLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVK 300
Query: 301 VSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQ 360
VSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQ
Sbjct: 301 VSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQ 360
Query: 361 KFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGE 420
KFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGE
Sbjct: 361 KFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGE 420
Query: 421 ASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQR 480
ASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQR
Sbjct: 421 ASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQR 480
Query: 481 LHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMV 540
LHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMV
Sbjct: 481 LHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMV 540
Query: 541 KKLHLGHVARSFGLKEQPSLLGRSHQVQL 569
KKLHLGHVARSFGLKEQPSLLGRSHQVQL
Sbjct: 541 KKLHLGHVARSFGLKEQPSLLGRSHQVQL 569
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 171/539 (31%), Positives = 258/539 (47%), Gaps = 82/539 (15%)
Query: 25 FTDL--GLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPI 82
F++L L P + L+ GF+ T +QA AIP+ +S + + V AATG+GKTLA++ P+
Sbjct: 23 FSELSPALSPEVVKALKGG-GFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPV 81
Query: 83 VHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKE 142
V +L+ R P + +++ PTREL Q+Y +AQ + ++GG + E
Sbjct: 82 VEILR-RRPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAE 140
Query: 143 KARLRK-GISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEH 201
+L + G +IL+ TPG+L D ++ + Y N+ ++ DEAD +L+LGF K + I+
Sbjct: 141 LKKLEEEGANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISK 200
Query: 202 LGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKN 261
L P R+ L SAT E V LAK L+NPV + + + GK+
Sbjct: 201 L---------------PKLRRTGLFSATQTEAVKELAKAGLRNPVRVEVKTEVKPT-GKD 244
Query: 262 HTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQ 321
+Q + K P L Y+ ++ + L+ L +
Sbjct: 245 GA------------------QQELGPSKTPLGLRLEYMICEASNKSSQLVDFLV----QN 282
Query: 322 LSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKK 381
K++V+ +TC VD+ VL L+ G + HG M Q R+K
Sbjct: 283 NGKKIMVYFATCACVDYWAIVLPLLDSLKG-------------SPIIPYHGKMKQGPREK 329
Query: 382 SFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
+ FS+ S ILV TDVAARGLD P V I+QYD P + + ++HR GRTAR ++G+A+
Sbjct: 330 ALASFSALSSGILVCTDVAARGLDIPHVDLIVQYDPPQDPNVFIHRAGRTARYDQEGDAI 389
Query: 442 LFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDMHPWIMSLQRA 501
+FL P E Y+ L+ G LTE + ++D+ P I S A
Sbjct: 390 VFLLPKEDTYVEFLKRRGVPLTE-----------------RECSTNAVDIVPQIRSA--A 430
Query: 502 LESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSL 560
LE E K L AF S+VRAY H IF K L +G + +GL + PS+
Sbjct: 431 LEDRNVME---KGLT--AFVSFVRAYKEH--HCSYIFSWKDLEIGRLGMEYGLLQIPSM 482
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 225/469 (47%), Gaps = 83/469 (17%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
+F +LG+ P L A D MG++ PTRIQA+AIP A+ G+ ++ TG+GKT A+ PI+
Sbjct: 42 TFAELGVVPELVAAC-DAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPII 100
Query: 84 H-LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKE 142
LL+ +P+ FA VL PTREL Q+ G + + L ++GG +R ++
Sbjct: 101 QALLKQDKPQ-----ALFACVLSPTRELAFQI-GQQFEALGSAIGLSCTVLVGGVDRVQQ 154
Query: 143 KARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHL 202
L K I++ TPGRLLDHL T F ++++V DEAD +L + F KAL+DIL +
Sbjct: 155 AVSLAKRPHIVVGTPGRLLDHLTDTKGFSLNKLKYLVLDEADKLLNVEFQKALDDILNVI 214
Query: 203 GSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNH 262
P +R+ L SAT+ KV++L + L+NPV + + + S+
Sbjct: 215 ---------------PKERRTFLFSATMTNKVSKLQRACLRNPVKVEVASKYST------ 253
Query: 263 TXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQL 322
VD + Q + V + L+ +L L
Sbjct: 254 ----------------------VDTLR------QEFYFVPADYKDCFLVHVLNEL----P 281
Query: 323 SHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKS 382
+++F+ TC+S L L + K + G M QD R +
Sbjct: 282 GSMIMIFVRTCESTRLLALTLRNLRF-----------------KAISISGQMSQDKRLGA 324
Query: 383 FLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALL 442
F ++ IL+ TDVA+RGLD V +I YD P + +YVHRVGRTAR G G A+
Sbjct: 325 LNRFKTKDCNILICTDVASRGLDIQGVDVVINYDIPMNSKDYVHRVGRTARAGNTGYAVS 384
Query: 443 FLQPIETDYLRDLE-LHGASLTEYPLQKVLDS-FPVNGQRLHKRKQISL 489
+ E + + +E L G E P +KV ++ + +R+ K+I+L
Sbjct: 385 LVNQYEAMWFKMIEKLLG---YEIPDRKVDNAEIMILRERISDSKRIAL 430
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 207/426 (48%), Gaps = 74/426 (17%)
Query: 20 FASCSFTDLGL-HPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAY 78
F + SF +L L P L A + +G+Q PT IQA IP+A++G+ + A TG+GKT A+
Sbjct: 221 FHANSFLELNLSRPLLRAC--EALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTAAF 278
Query: 79 LAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGEN 138
P++ L R RV L+L PTREL QV+ + ++L F + I+GG +
Sbjct: 279 SLPVLERLLFRPKRV---PAIRVLILTPTRELAAQVHSMIEKLAQ-FTDIRCCLIVGGLS 334
Query: 139 RAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDI 198
++ LR I++ATPGR++DHL+++ S ++ ++ DEAD +LELGF ++++
Sbjct: 335 TKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAEIQEL 394
Query: 199 LEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAH 258
+ +M P +RQ +L SAT+ E++N L +SL PV + D
Sbjct: 395 I---------------RMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLEAD------- 432
Query: 259 GKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLF 318
K PA L + V++ +R A +L +L
Sbjct: 433 ---------------------------PSLKRPATLTEEVVRIR-RAREANQEAVLLALC 464
Query: 319 ERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDD 378
+ KV++F T S + GL K LHGN+ Q
Sbjct: 465 LKTFKDKVIIFSGTKHSAHRLKIIF-------GLS----------GMKAAELHGNLTQAQ 507
Query: 379 RKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKG 438
R ++ F ++ L++TDVAARG+D V+ +I + P +A Y+HRVGRTAR G +G
Sbjct: 508 RLEALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREG 567
Query: 439 EALLFL 444
A+ F+
Sbjct: 568 YAVTFV 573
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 135/436 (30%), Positives = 204/436 (46%), Gaps = 74/436 (16%)
Query: 22 SCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP 81
S F +GL + ++ K G++ PT IQ +A+P+ ++G + A TG+GKT A+L P
Sbjct: 48 SGGFESMGLCEEVYRGVRHK-GYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVP 106
Query: 82 IVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAK 141
++ L+ R + G AL+L PTR+L Q AQQL +F L I+GG++
Sbjct: 107 MIQRLR----RHDAGAGIRALILSPTRDLATQTLKFAQQL-GKFTDLKISLIVGGDSMES 161
Query: 142 EKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEH 201
+ L + I+IATPGRL+ HL + ++VFDEADS+ LG + L DIL
Sbjct: 162 QFEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHK 221
Query: 202 LGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKN 261
L +DT RQ LL SATL + + AK L++P ++ LD
Sbjct: 222 L---SDT------------RQTLLFSATLPQALADFAKAGLRDPQIVRLDL--------- 257
Query: 262 HTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQ 321
D K+ L + + +LA LL +++ +
Sbjct: 258 -------------------------DKKISPDLKLAFFTLRQEEKLAALLYLVRERISSE 292
Query: 322 LSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKK 381
+ ++F+ST V+F + + + P L +G MDQ+ R
Sbjct: 293 --EQTIIFVSTKHHVEFLNILFREEGLEPSLS-----------------YGAMDQEARNI 333
Query: 382 SFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
F + K+ IL+ TDVAARGLD P + ++ +D P + +VHRVGR AR G G A
Sbjct: 334 HISKFRARKTMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAY 393
Query: 442 LFLQPIETDYLRDLEL 457
F+ + YL DL L
Sbjct: 394 TFVTSEDMAYLLDLHL 409
>Os07g0660000
Length = 444
Score = 182 bits (462), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 145/481 (30%), Positives = 215/481 (44%), Gaps = 111/481 (23%)
Query: 42 MGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFA 101
MG++APTRIQA+ IP A+ G+ ++ TG+GKT A+ PI+ L E R FA
Sbjct: 1 MGWKAPTRIQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHR----PCFFA 56
Query: 102 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGG---------------------ENRA 140
VL PTREL +Q+ + L L ++GG +RA
Sbjct: 57 CVLAPTRELAIQIAKQFEALGSAIS-LQCSVLIGGIPRTSQTISLAKRPHVVVWWRSSRA 115
Query: 141 KEKARLRKGISIL---------IATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGF 191
LRKG + TPGRLLDHL +T F + ++++V DEAD +L++ F
Sbjct: 116 CLPEHLRKGFDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDF 175
Query: 192 GKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLD 251
KA++DIL + P +R+ L SAT+ EKV +L + LKNPV + +
Sbjct: 176 QKAVDDILNVI---------------PKERRTFLFSATMTEKVKKLRRACLKNPVKVEVA 220
Query: 252 EQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILL 311
+ S T+ Q D + +PA+ Y
Sbjct: 221 SKYSLVD---------------------TLRQ--DLYVVPAKYKDCY------------- 244
Query: 312 TILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLH 371
L + + ++VF+ TC+S +L L + K +
Sbjct: 245 --LIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLRF-----------------KAISIS 285
Query: 372 GNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRT 431
G M QD R + F + ILV TDVA+RGLD V +I YD P + +Y+HRVGRT
Sbjct: 286 GQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRT 345
Query: 432 ARIGEKGEALLFLQPIETDYLRDLE--LHGASLTEYPLQKV-LDSFPVNGQRLHKRKQIS 488
AR G+ G A+ + E ++ + E L G E P +KV D + +R++ K+I+
Sbjct: 346 ARAGQSGYAVSLVNQFEGEFFKLTEQFLGG---EEIPARKVDADEIMILHERIYDSKRIA 402
Query: 489 L 489
L
Sbjct: 403 L 403
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 207/435 (47%), Gaps = 82/435 (18%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
F DL L + L++K G PT IQ Q +PV +SG+ M+ A TG+GKTL ++ P++
Sbjct: 16 DFRDLRLPEPMLRKLREK-GIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI 74
Query: 84 HLL---QMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLV-----HRFHWLVPGYIMG 135
+ +M P V +G F +++ P+REL Q Y + +Q + + + P +G
Sbjct: 75 MVALQEEMMMPIVP-GEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIG 133
Query: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
G + + ++KG+ I++ATPGRL D L N R++ DEAD +++LGF +
Sbjct: 134 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAK-KKMNLDNCRYLTLDEADRLVDLGFEDDI 192
Query: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
++ +H + +RQ LL SAT+ +K+ AK +L PV++ + +
Sbjct: 193 REVFDHFKA---------------QRQTLLFSATMPKKIQNFAKSALVKPVIVNVGRAGA 237
Query: 256 SAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILK 315
+ N+ V Q V+ YVK +R+ LL L+
Sbjct: 238 A---------------------NLDVIQEVE-----------YVKED--ARIIYLLECLQ 263
Query: 316 SLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMD 375
+ V+VF VD+ H L + +HG D
Sbjct: 264 -----KTPPPVLVFCENKADVDYIHEYLL-----------------LKGVEAVAIHGGKD 301
Query: 376 QDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIG 435
Q++R+ + F + K +LV+TDVA++GLDFP ++ +I YD P E YVHR+GRT R G
Sbjct: 302 QEERENAIEFFKNGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCG 361
Query: 436 EKGEALLFLQPIETD 450
+ G A F+ +T+
Sbjct: 362 KTGIATTFINKNQTE 376
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 134/470 (28%), Positives = 219/470 (46%), Gaps = 76/470 (16%)
Query: 5 LGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHM 64
LG E E LF + F + G+ P L D G+ T +Q A+P+ + G+ +
Sbjct: 324 LGAERRRYESRGESLFTNKRFEECGISPLTVKALTD-AGYVQTTVVQETALPMCLEGKDV 382
Query: 65 LVKAATGTGKTLAYLAPIVH--LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLV 122
LVKA TGTGK+ A+L P + L M+ R F+L+L PTREL +Q+ A L+
Sbjct: 383 LVKAKTGTGKSAAFLLPAIESVLNAMKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLL 442
Query: 123 HRFHWLVPGYIMGGENRAKEKARLRKG-ISILIATPGRLLDHLQHTSSFVYP--NMRWIV 179
+ ++GG ++ RL IL+ATPGRLLDH+++ SSF ++ +V
Sbjct: 443 KYHQGIGVQSLIGGTRFKLDQRRLESDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLV 502
Query: 180 FDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAK 239
DEAD +L+LGF +E I++ L P +RQ LL SAT+ ++V R+++
Sbjct: 503 LDEADHLLDLGFRTDIEKIVDSL---------------PRQRQTLLFSATIPKEVRRVSQ 547
Query: 240 ISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYV 299
+ LK H + + P ++ Q Y+
Sbjct: 548 LVLKR-------------------------------DHVFVDTVGLGAVETPTKVEQLYL 576
Query: 300 KVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKK 359
+ ++ +L+ ++++ +KV+VF +T +F + +L L+ +
Sbjct: 577 VMPHELHFHMVYRLLREHIDQEVDYKVIVFCTTAMVTEFMYIMLRDLKLN---------- 626
Query: 360 QKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPG 419
V +H Q R + F ILV++DV+ RG+++P V +IQ P
Sbjct: 627 -------VREIHSRKPQLYRTRISEEFRDSSRLILVTSDVSTRGVNYPGVTLVIQVGVPS 679
Query: 420 EASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQK 469
+ Y+HR+GRT R G+ G+ +L L P E +L E+H + P+QK
Sbjct: 680 DREHYIHRLGRTGREGKSGKGILLLAPWEEYFLN--EIH-----DLPVQK 722
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/451 (29%), Positives = 215/451 (47%), Gaps = 77/451 (17%)
Query: 20 FASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYL 79
F C+ + L L A G++ T++Q +PV + G+ +L KA TGTGKT+A+L
Sbjct: 128 FDQCTISPLSLKAVKDA------GYERMTQVQEATLPVILQGKDVLAKAKTGTGKTVAFL 181
Query: 80 APIVHLLQM--REPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGE 137
P + +L R + LV+ PTREL +QV A++L+ L ++GG
Sbjct: 182 LPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQVAVEAKKLLKYHRSLGVQVVIGGT 241
Query: 138 NRAKEKARLRKG-ISILIATPGRLLDHLQHTSSFV--YPNMRWIVFDEADSILELGFGKA 194
+E+ ++ IL+ATPGRL DH+++T F ++ +V DEAD +L++GF +
Sbjct: 242 RLTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTRLKGVKVLVLDEADRLLDMGFRRD 301
Query: 195 LEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQN 254
+E I+ + P +RQ LL SAT+ E+V +++ I++K
Sbjct: 302 IERIIASV---------------PKERQTLLFSATVPEEVRQISHIAMK----------- 335
Query: 255 SSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTIL 314
KN+ K TV+ D + AQ+ Q ++ +IL +L
Sbjct: 336 -----KNY-------------KFINTVKDG--DEETHAQVSQMFMIAPLDLHFSILYDVL 375
Query: 315 KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNM 374
K +KV++F +T +LSQL + + +H
Sbjct: 376 KKHVAEDADYKVIIFCTTAMVTKLVAEILSQLRLN-----------------IREIHSRK 418
Query: 375 DQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARI 434
Q R K F + ILVS+DV+ARG+D+P V +IQ P + +Y+HR+GRT R
Sbjct: 419 SQSARTKVSDEFRKSRGLILVSSDVSARGVDYPDVTLVIQVGVPADRQQYIHRLGRTGRK 478
Query: 435 GEKGEALLFLQPIETDYL---RDLELHGASL 462
G++G+ LL L P E +L +DL + A++
Sbjct: 479 GKEGQGLLLLAPWEKYFLSSIKDLSISEATV 509
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 206/443 (46%), Gaps = 76/443 (17%)
Query: 17 EGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTL 76
E F C + L L A G++ T++Q +P+ + G+ +L KA TGTGKT+
Sbjct: 73 ETRFDQCPVSPLSLKAIKDA------GYEKMTQVQEATLPIILQGEDVLAKAKTGTGKTV 126
Query: 77 AYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGG 136
A+L P + LL + R+ LV+ PTREL QV A++L+ L ++GG
Sbjct: 127 AFLLPAIELLST----LPRSPSINLLVICPTRELANQVAAEARKLLKYHRSLGVQVVIGG 182
Query: 137 ENRAKEKARLRKG-ISILIATPGRLLDHLQHTSSFV--YPNMRWIVFDEADSILELGFGK 193
+E+ ++ IL+ATPGRL DHL++T F ++ +V DEAD +L++GF +
Sbjct: 183 TKLPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVLVLDEADRLLDMGFRR 242
Query: 194 ALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQ 253
+E I+ + P +RQ LL SAT+ E+V +++ I++K G
Sbjct: 243 DIEKIIAFI---------------PKERQTLLFSATVPEEVRQISHIAMKR----GYKFI 283
Query: 254 NSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTI 313
N+ G T +Q+ Q Y+ +IL +
Sbjct: 284 NTVKEGDEETH---------------------------SQVSQMYMVAPLDLHFSILYNV 316
Query: 314 LKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGN 373
LK +KV+VF +T VLSQL+ + + +H
Sbjct: 317 LKKHIAEDADYKVIVFCTTAMVTKLVAEVLSQLKLN-----------------IREIHSR 359
Query: 374 MDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTAR 433
Q R K F K ILVS+DV+ARG+D+P V +IQ P + +Y+HR+GRT R
Sbjct: 360 KSQSARTKVSDEFRKSKGLILVSSDVSARGVDYPDVTLVIQVGLPADREQYIHRLGRTGR 419
Query: 434 IGEKGEALLFLQPIETDYLRDLE 456
G+ G LL L P ET +L ++
Sbjct: 420 KGKDGLGLLLLAPWETYFLNSVQ 442
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 201/418 (48%), Gaps = 75/418 (17%)
Query: 41 KMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTF 100
K+GF+ P IQAQA+P+ MSG+ + A TG+GKTLA++ P++ ++ +P V DG
Sbjct: 441 KLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVK-DQPAVVPGDGPI 499
Query: 101 ALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRL 160
L++ PTREL +Q++ ++ I GG A++ + L++G I++ TPGR+
Sbjct: 500 GLIMAPTRELVVQIHSDIKKFSKALGINCVA-IYGGSGVAQQISELKRGAEIVVCTPGRM 558
Query: 161 LDHLQHTSSFVYPNMRWIVF---DEADSILELGFGKALEDILEHLGSRNDTSNQNKNKME 217
+D L TSS N+R + F DEAD + ++GF + I+++ +R D
Sbjct: 559 IDIL-CTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQN--TRPD---------- 605
Query: 218 PMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKH 277
RQ +L SAT +V LA+ L PV I + S K+ T
Sbjct: 606 ---RQTVLFSATFPRQVEILARKVLTKPVEIQVG--GRSVVNKDIT-------------- 646
Query: 278 NVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVD 337
QLV+ + R LL +L F++ K++VF+ + D D
Sbjct: 647 ---------------QLVEVRPE---NERFFRLLELLGEWFDK---GKILVFVHSQDKCD 685
Query: 338 FHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVST 397
L D Q C LHG DQ DR+ + F S ++L++T
Sbjct: 686 ---------------SLLKDLFQHGYPC--LSLHGGKDQTDRESTLADFKSNVCSLLIAT 728
Query: 398 DVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
VAARGLD +++ ++ YD P +YVHRVGRT R G KG A+ F+ E Y DL
Sbjct: 729 SVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISEEEERYAPDL 786
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/419 (30%), Positives = 202/419 (48%), Gaps = 79/419 (18%)
Query: 20 FASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYL 79
FA C F P + K G++ PT IQ QA+P+ +SG+ ++ A TG+GKT A++
Sbjct: 221 FADCGF------PVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFV 274
Query: 80 AP-IVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGEN 138
P IVH+ M +P +E+ +G +V PTREL Q+Y A++ ++ V + GG +
Sbjct: 275 LPMIVHI--MDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRV-AAVYGGVS 331
Query: 139 RAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDI 198
+ + L+ G I+IATPGRL+D L+ + ++ ++V DEAD + +LGF + I
Sbjct: 332 KFDQFKELKAGCEIVIATPGRLIDLLKMKALKMF-RATYLVLDEADRMFDLGFEPQIRSI 390
Query: 199 LEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAH 258
+ + R D RQ LL SAT+ KV RLA+ L +P+ + + + S+
Sbjct: 391 VGQI--RPD-------------RQTLLFSATMPYKVERLAREILTDPIRVTVGQVGSA-- 433
Query: 259 GKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLF 318
N ++Q V+ V S ++ LL L +
Sbjct: 434 -------------------NEDIKQVVN------------VLPSDAEKMPWLLEKLPGMI 462
Query: 319 ERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDD 378
+ V+VF + VD + L+Q + ++ LHG+ DQ
Sbjct: 463 D---DGDVLVFAAKKARVDEIESQLNQRGF-----------------RIAALHGDKDQAS 502
Query: 379 RKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEK 437
R ++ F S +LV+TDVAARGLD +K ++ +D E ++HR+GRT R G+K
Sbjct: 503 RMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDK 561
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 205/438 (46%), Gaps = 83/438 (18%)
Query: 23 CSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP- 81
SF G P + +Q + GF +PT IQAQ+ P+A+ Q ++ A TG+GKTL YL P
Sbjct: 150 TSFETGGFPPEILKEIQ-RAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPG 208
Query: 82 IVHLLQMR-EPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRA 140
+H+ +++ PR G LVL PTREL Q+ A + R + + GG +
Sbjct: 209 FMHIKRLQNNPR----SGPTVLVLAPTRELATQILEEAVKF-GRSSRISSTCLYGGAPKG 263
Query: 141 KEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILE 200
+ L +G+ +++ATPGRL D L+ + ++V DEAD +L++GF + I++
Sbjct: 264 PQLRDLDRGVDVVVATPGRLNDILE-MRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVK 322
Query: 201 HLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGK 260
+ P +RQ L+ +AT ++V R+A+ L +PV + +
Sbjct: 323 EI---------------PPRRQTLMYTATWPKEVRRIAEDLLVHPVQVTI---------- 357
Query: 261 NHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFER 320
+VD+ + + Q ++ +L L IL+S +
Sbjct: 358 ----------------------GSVDELVANSAITQNVELITPSEKLRRLEQILRS---Q 392
Query: 321 QLSHKVVVFLST---CDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQD 377
KV++F +T CD QL ++F + + HG+ Q
Sbjct: 393 DSGSKVLIFCTTKRMCD------------------QLARTLTRQFGASAI---HGDKSQS 431
Query: 378 DRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEK 437
+R+K F S +S ILV+TDVAARGLD ++ +I YD P +YVHR+GRT R G
Sbjct: 432 EREKVLSHFRSGRSPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGAT 491
Query: 438 GEALLFLQPIETDYLRDL 455
G A F ++ Y DL
Sbjct: 492 GVAYTFFCDQDSKYAADL 509
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/420 (28%), Positives = 198/420 (47%), Gaps = 61/420 (14%)
Query: 40 DKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERT--D 97
+K G++ P+ IQ +IP+ + + ++ A TG+GKT A++ P++ + P E +
Sbjct: 331 EKAGYKEPSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAE 390
Query: 98 GTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATP 157
G +A+V+ PTREL Q+ + V I+GG++ ++ ++R+G ++IATP
Sbjct: 391 GPYAVVMAPTRELAQQIEEETVKFATYLGIKVVS-IVGGQSIEEQGFKIRQGCEVVIATP 449
Query: 158 GRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKME 217
GRLLD L+ + V ++V DEAD ++++GF + +L+ + S N +++
Sbjct: 450 GRLLDCLERRYA-VLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELD 508
Query: 218 P--MKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXX 275
+ R + SAT+ V RLA+ L+NPV++ +
Sbjct: 509 AKTIYRTTYMFSATMPPAVERLARKYLRNPVVVTIG------------------------ 544
Query: 276 KHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDS 335
T +A D + Q + +++ L IL L ++ +VF +T S
Sbjct: 545 ----TAGKATD------LITQNVIMTKESEKMSRLQKILTDLGDK----PAIVFCNTKKS 590
Query: 336 VDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILV 395
D D DK +V LHG Q+ R+ S GF + + +LV
Sbjct: 591 ADARAK-------------DLDK----AGFRVTTLHGGKSQEQRETSLDGFRNRRFTVLV 633
Query: 396 STDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
+TDVA RG+D P V +I Y+ P Y HR+GRT R G+KG A FL TD DL
Sbjct: 634 ATDVAGRGIDIPDVAHVINYEMPSSIDTYTHRIGRTGRAGKKGLATSFLTLENTDIFFDL 693
>AK107287
Length = 554
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 205/441 (46%), Gaps = 87/441 (19%)
Query: 23 CSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP- 81
SF + G + + ++ KMGF P+ IQ+QA P+A+SG+ ++ A TG+GKT+ + P
Sbjct: 133 TSFDEAGFPDYILSEIK-KMGFAEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPA 191
Query: 82 IVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHW---LVPGYIMGGEN 138
+VH+ +P ++ DG AL+L PTREL Q+ Q +RF L + GG
Sbjct: 192 MVHI--NAQPLLKPGDGPIALILAPTRELANQI----QVECNRFGGSSRLRTCAVYGGVP 245
Query: 139 RAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMR---WIVFDEADSILELGFGKAL 195
+ + L++G I+IATPGRL+D + + N+R ++V DEAD +L++GF +
Sbjct: 246 KGPQTRDLQRGAEIVIATPGRLIDMVDAGKT----NLRRVTYLVMDEADRMLDMGFEPQI 301
Query: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
IL+ + R D RQ L+ SAT ++V RLA L + + +
Sbjct: 302 RKILQQI--RPD-------------RQTLMFSATWPKEVQRLAGDFLNDFAQVNIGSTEL 346
Query: 256 SAHGKNHTXXXXXXXXXXXXKHNVT-VEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTIL 314
+A+ HNV + + +F+ +L+ +S
Sbjct: 347 AAN------------------HNVKQIIEVCSEFEKKGKLIGHLETIS------------ 376
Query: 315 KSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNM 374
Q + KV++F ST D L Q W P L + HG+
Sbjct: 377 ------QENGKVIIFTSTKRVADDLTKYLRQDGW-PALAI----------------HGDK 413
Query: 375 DQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARI 434
Q +R F S +S I+V+T VA+RGLD + +I YD P +YVH++GRT R
Sbjct: 414 QQQERDWVLAEFKSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRA 473
Query: 435 GEKGEALLFLQPIETDYLRDL 455
G G A F P + R+L
Sbjct: 474 GRTGTAYTFFTPENSKSAREL 494
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 127/420 (30%), Positives = 199/420 (47%), Gaps = 82/420 (19%)
Query: 41 KMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERT--DG 98
+ GF APT IQAQ+ P+A+ + ++ A TG+GKTL YL P LL+ R++ DG
Sbjct: 248 QAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLK----RLQHNSRDG 303
Query: 99 TFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPG 158
LVL PTREL Q+ A++ R + + GG + + L +G I++ATPG
Sbjct: 304 PTVLVLSPTRELATQIQDEAKKF-GRSSRISSVCLYGGAPKGPQLRDLERGADIVVATPG 362
Query: 159 RLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEP 218
RL D L+ ++ + ++V DEAD +L++GF + I++ +++P
Sbjct: 363 RLNDILEMRRVSLH-QVSYLVLDEADRMLDMGFEPQIRKIVK--------------QVQP 407
Query: 219 MKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHN 278
KRQ L+ +AT ++V ++A L NPV + + + K
Sbjct: 408 -KRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANK------------------ 448
Query: 279 VTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLST---CDS 335
++ Q VD P + SR L IL+S ++ K+++F ST CD
Sbjct: 449 -SITQYVDVITPPEK-----------SRR--LDQILRS---QEPGSKIIIFCSTKRMCD- 490
Query: 336 VDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILV 395
QL + +++ + + HG+ Q +R F S + ILV
Sbjct: 491 -----------------QLARNLARQYGASAI---HGDKSQAERDSVLSEFRSGRCPILV 530
Query: 396 STDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
+TDVAARGLD ++ ++ YD P +YVHR+GRT R G G A F ++ Y DL
Sbjct: 531 ATDVAARGLDIKDIRVVVNYDFPTGVEDYVHRIGRTGRAGATGVAYTFFCDQDSKYASDL 590
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 221/463 (47%), Gaps = 39/463 (8%)
Query: 5 LGKSPVAKEEDK--EGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQ 62
L KS V K+ K E LF++ SF +LGL P L L +K G APT +Q+ AIP+
Sbjct: 111 LPKSAVLKKTLKIDESLFSAKSFEELGLPPLLIDRL-NKEGLTAPTEVQSAAIPIISQKH 169
Query: 63 HMLVKAATGTGKTLAYLAPIV-HLLQMREP----RVERTDGTFALVLVPTRELCLQVYGI 117
++++ TG+GKTLAYL PI+ + ++ P ++ G A+++ P+REL +Q+
Sbjct: 170 DAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIVAPSRELGMQIVRE 229
Query: 118 AQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISIL-IATPGRLLDHLQHTSSFVYPNMR 176
++++ + ++GG NR++++ L+K I+ + TPGR + + + R
Sbjct: 230 VEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPIIVVGTPGR-ISEISAAGKLHTHSCR 288
Query: 177 WIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPM----KRQNLLLSATLNE 232
++V DE D +L + + + ILEH+G ++ TS +++ + P+ +RQ +L+SAT+
Sbjct: 289 FLVLDEVDQLLSFNYREDMHRILEHVGRKSGTS--SRDILGPLARRSERQTILVSATIPF 346
Query: 233 KVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPA 292
V R A+ +PV++ N + AVD LP
Sbjct: 347 SVIRAARSWGHDPVLVRAMSVVPLESITVPRPVLSQPDANSNSPSNSVNQAAVDS--LPP 404
Query: 293 QLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGL 352
L Y C S+ + L+ + V+ F++ + V+ +LE
Sbjct: 405 SLEHYY----CTSKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLK---DVVFKLEAR--- 454
Query: 353 QLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCI 412
K LHG++ + R F + +LV+ +++ARGLD P+ +
Sbjct: 455 -----------GMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLV 503
Query: 413 IQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
I D P +++ Y HR GRT R+G KG + + ET +R +
Sbjct: 504 INLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKM 546
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 201/428 (46%), Gaps = 70/428 (16%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
+F ++ L L +++ + + PT +Q AIP++++G+ ++ A TG+GKT A+ PI+
Sbjct: 175 TFAEIDLGDALNENIR-RCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPII 233
Query: 84 H-LLQMR---EPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFH-WLVPGYIMGGEN 138
++ R PR RT AL+L PTREL +Q++ A++ ++ +V Y GG
Sbjct: 234 SGIMSSRPPQRPRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVRVVVAY--GGAP 291
Query: 139 RAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDI 198
++ L +G+ IL+ATPGRL+D L+ + ++++ DEAD +L++GF + I
Sbjct: 292 IHQQLRELERGVEILVATPGRLMDLLERARVSLQ-MVKYLALDEADRMLDMGFEPQIRKI 350
Query: 199 LEHLGSRNDTSNQNKNKMEPMK-RQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSA 257
+E + M P RQ +L SAT +++ R+A L + + + + SS
Sbjct: 351 VEQM------------DMPPRGVRQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSST 398
Query: 258 HGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSL 317
L AQ V+ ++ S L LL K+
Sbjct: 399 -------------------------------DLIAQRVEFVLEADKRSYLMDLLHAQKAN 427
Query: 318 FERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQD 377
+VF+ T D L ++ G + +HG+ Q
Sbjct: 428 GTHGKQALTLVFVETKRGAD----ALENWLYTNGFPATS-------------IHGDRTQQ 470
Query: 378 DRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEK 437
+R+ + F S + ILV+TDVAARGLD P V +I +D P + +YVHR+GRT R G+
Sbjct: 471 EREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRAGKS 530
Query: 438 GEALLFLQ 445
G A F
Sbjct: 531 GLATAFFN 538
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 128/469 (27%), Positives = 223/469 (47%), Gaps = 51/469 (10%)
Query: 5 LGKSPVAKEEDK--EGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQ 62
L KS V K+ K E LF++ SF +LGL P L L +K G PT +Q+ AIP+
Sbjct: 111 LPKSAVVKKTLKIDESLFSAKSFEELGLPPLLIDRL-NKEGLSTPTEVQSAAIPIISQKH 169
Query: 63 HMLVKAATGTGKTLAYLAPIV-HLLQMREPR----VERTDGTFALVLVPTRELCLQVYGI 117
++++ TG+GKTLAYL PI+ + ++ P ++ G A+++ P+REL +Q+
Sbjct: 170 DAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAPSRELGMQIVRE 229
Query: 118 AQQLVHRFHWLVPGYIMGGENRAKEKARLRKGIS-ILIATPGRLLDHLQHTSSFVYPNMR 176
++++ + ++GG NR++++ L+K I++ TPGR + + R
Sbjct: 230 VEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPLIVVGTPGR-ISEISAGGKLHTHGCR 288
Query: 177 WIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPM----KRQNLLLSATLNE 232
++V DE D +L + + + ILEH+G ++ TS +++ + P+ +RQ +L+SAT+
Sbjct: 289 FLVLDEVDQLLSFNYREDMHRILEHVGRKSGTS--SRDILGPLARRSERQTILVSATIPF 346
Query: 233 KVNRLAKISLKNPVM------IGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVD 286
V R A+ +PV+ + LD + T N + AV+
Sbjct: 347 SVIRAARSWGHDPVLVRAMSVVPLDSITVPRPVLSQT------DANPNSPSNSVNQAAVN 400
Query: 287 DFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQL 346
LP L Y C S+ + L+ + V+ F++ + V+ +L
Sbjct: 401 S--LPPSLEHYY----CISKAQHKVDTLRRCIHALEAQTVIAFMNNTKPL---KDVVFKL 451
Query: 347 EWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDF 406
E K LHG++ + R F + +LV+ +++ARGLD
Sbjct: 452 EAR--------------GMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDV 497
Query: 407 PKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
P+ +I D P +++ Y HR GRT R+G KG + + ET +R +
Sbjct: 498 PECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKM 546
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 205/429 (47%), Gaps = 84/429 (19%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
SF +LGL + A L + MG PT IQ +P ++G +++ + TG+GKTLAYL P+V
Sbjct: 111 SFEELGLGEEVMAALGE-MGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLV 169
Query: 84 HLLQMRE--------PRVERTDGTFALVLVPTRELCLQVYGIAQQLVH--RFHWLVPGYI 133
LL+ E PR R A+VL PTREL QV+ +A+ + H RF + +
Sbjct: 170 QLLRRDEAMLGMSMKPRRPR-----AVVLCPTRELTEQVFRVAKSISHHARFRSTM---V 221
Query: 134 MGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGK 193
GG ++ L + +++ TPGR+LDH++ + VY +++++V DEAD++ + GFG
Sbjct: 222 SGGSRIRPQEDSLNMPVDMVVGTPGRILDHIKD-GNMVYGDIKYLVLDEADTMFDQGFGP 280
Query: 194 ALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQ 253
+ L L +R K Q +L++AT+ + V +L +DE+
Sbjct: 281 DIRKFLAPLKNR-------AAKPGDQGFQTVLVTATMTKAVQKL------------IDEE 321
Query: 254 NSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCG-SRLAILLT 312
G H +H+ ++K+S ++L LL
Sbjct: 322 ---FEGIVHLRTTTFQKRVATARHD-------------------FIKLSGSENKLEALLQ 359
Query: 313 ILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHG 372
+L+ + +KV+VF +T +S L++ + S HG
Sbjct: 360 VLEPSLAK--GNKVMVFCNTLNSSRAVDHFLTENQIS-----------------TVNYHG 400
Query: 373 NMDQDDRKKSFLGFSSEKS--AILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGR 430
+ ++R ++ F +E+ LV TD+AARGLD V +I +D P + +Y+HR GR
Sbjct: 401 EVPAEERVENLNKFRNEEGDCPTLVCTDLAARGLDL-DVDHVIMFDFPSNSIDYLHRTGR 459
Query: 431 TARIGEKGE 439
TAR+G KG+
Sbjct: 460 TARMGAKGK 468
>AK111212
Length = 545
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 193/417 (46%), Gaps = 77/417 (18%)
Query: 43 GFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-IVHLLQMREPRVERTDGTFA 101
GF APT IQ+Q P+A+SG+ ++ A TG+GKTL Y P IVH+ +P + DG
Sbjct: 156 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHI--NAQPLLAPGDGPIV 213
Query: 102 LVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLL 161
LVL PTREL +Q+ ++ R + + GG + + L +G+ + IATPGRL+
Sbjct: 214 LVLAPTRELAVQIQEEMKKF-GRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLI 272
Query: 162 DHLQHTSSFVYPNMR---WIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEP 218
D L+ + N+R ++V DEAD +L++GF + I+ + R D
Sbjct: 273 DMLEAGKT----NLRRVTYLVLDEADRMLDMGFEPQIRKIIGQI--RPD----------- 315
Query: 219 MKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHN 278
RQ L SA ++V LA L + + + + +A+ H
Sbjct: 316 --RQTLTWSAAWPKEVRALASDFLNDFIQVNIGSMELAAN------------------HR 355
Query: 279 VTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDF 338
+T Q+V+ + R ++ L+ E + +K+++F+ T D
Sbjct: 356 IT------------QIVEVVTDMEKRDR---MIKHLEKTMENK-ENKILIFVGTKRIADE 399
Query: 339 HHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTD 398
L Q W P L +HG+ Q++R F + KS I+V+TD
Sbjct: 400 ITRFLRQDGW-PALS----------------IHGDKQQNERDWVLDQFKTGKSPIMVATD 442
Query: 399 VAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
VA+RG+D + ++ YD P + +Y+HR+GRT R G KG A+ RDL
Sbjct: 443 VASRGIDVRNITHVLNYDYPHNSEDYIHRIGRTGRAGAKGTAITLFTTDNQKQARDL 499
>AK110107
Length = 671
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 196/439 (44%), Gaps = 82/439 (18%)
Query: 31 HPTLCAHLQ---DKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQ 87
+P L HL D ++ PT +Q +IP+ M G+ ++ A TG+GKT +L PI+
Sbjct: 184 NPPLDDHLIRNIDLARYKIPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAF 243
Query: 88 MREPRVERTDG-----------TFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGG 136
P T G +L+L PTREL Q+Y +++ +R W+ P + GG
Sbjct: 244 QTGPSANPTAGGGGFGRQRKAYPTSLILAPTRELVSQIYDESRKFAYR-SWVRPCVVYGG 302
Query: 137 ENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALE 196
+ + ++ +G +L+ATPGRL+D ++ N++++V DEAD +L++GF +
Sbjct: 303 ADIGSQLRQIERGCDLLVATPGRLVDLIER-GRISLQNIKYLVLDEADRMLDMGFEPQIR 361
Query: 197 DILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSS 256
I+E D N RQ L+ SAT + LA+ LK+ + + + S+
Sbjct: 362 RIVEG----EDMPNV-------QDRQTLMFSATSPRDIQMLARDFLKDYIFLSVGRVGST 410
Query: 257 AHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKS 316
+ N+T Q+ V + ++LL IL +
Sbjct: 411 S-------------------ENIT---------------QKVEYVEDVDKRSVLLDILHT 436
Query: 317 LFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQ 376
+ ++F+ T D L Q F + + HG+ Q
Sbjct: 437 ----HGAGLTLIFVETKRMADSLSDFLI--------------NQNFPATSI---HGDRTQ 475
Query: 377 DDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGE 436
+R+++ F + + ILV+T VAARGLD P V ++ YD P + +YVHR+GRT R G
Sbjct: 476 RERERALEMFRNGRCPILVATAVAARGLDIPNVTHVVNYDLPTDIDDYVHRIGRTGRAGN 535
Query: 437 KGEALLFLQPIETDYLRDL 455
G + F +R+L
Sbjct: 536 TGHSTAFFNRGNRGVVREL 554
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 210/455 (46%), Gaps = 79/455 (17%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
+F ++ L L +++ + + PT +Q AIP++++G+ ++ A TG+GKT A+ PI+
Sbjct: 156 TFAEIDLGQALNDNIR-RCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPII 214
Query: 84 HLLQMREPRVE-------RTDGTFALVLVPTRELCLQVYGIAQQLVHRFH-WLVPGYIMG 135
+ MR P + RT AL+L PTREL +Q++ A++ ++ +V Y G
Sbjct: 215 SGI-MRGPPAQRPQRGGMRTACPLALILSPTRELSMQIHEEARKFSYQTGVRVVVAY--G 271
Query: 136 GENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKAL 195
G ++ L +G+ IL+ATPGRL+D L+ + ++R++ DEAD +L++GF +
Sbjct: 272 GAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQ-SIRYLALDEADRMLDMGFEPQV 330
Query: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
I+E + + P RQ +L SAT +++ R+A L+N + + + S
Sbjct: 331 RRIVEQM-----------DMPPPGARQTMLFSATFPKEIQRMASDFLENYIFLAVGRVGS 379
Query: 256 SAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILK 315
S +VQR V + + L+ +L
Sbjct: 380 STD----------------------------------LIVQRVEFVQEADKRSHLMDLLH 405
Query: 316 SLFERQLSHK---VVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHG 372
+ + K +VF+ T D L + P + D+ Q+
Sbjct: 406 AQRDSATPGKPTLTLVFVETKRGADSLEHWLC-MNGFPATSIHGDRNQQ----------- 453
Query: 373 NMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTA 432
+R+ + F S + ILV+TDVAARGLD P V ++ +D P + +YVHR+GRT
Sbjct: 454 -----EREYALRSFKSGHTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTG 508
Query: 433 RIGEKGEALLFLQPIETDYLRDL-ELHGASLTEYP 466
R G+ G A F + R L EL S E P
Sbjct: 509 RAGKSGLATAFFNENNSSMARSLAELMQESNQEVP 543
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 126/438 (28%), Positives = 196/438 (44%), Gaps = 89/438 (20%)
Query: 28 LGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLL- 86
LGL L + L+ K G IQ + A+ G+ ++ +A TGTGKTLA+ P++ L
Sbjct: 74 LGLPEQLVSTLE-KRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLM 132
Query: 87 ------QMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRA 140
+R R+ R LVL PTREL QV ++ + + + GG +
Sbjct: 133 EEDDGRSVRRGRIPRV-----LVLAPTRELAKQVEKEIKESAPKLSTVC---VYGGVSYN 184
Query: 141 KEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILE 200
++ L +G+ +++ TPGR++D L + S ++++V DEAD +L +GF + +E IL+
Sbjct: 185 VQQNALSRGVDVVVGTPGRIID-LINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQ 243
Query: 201 HLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGL--DEQNSSAH 258
L P +RQ++L SAT+ V +L++ L NP+ I L D+ A
Sbjct: 244 QL---------------PAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAE 288
Query: 259 GKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLF 318
G + + +P S + L+ L+T+
Sbjct: 289 G-------------------------IKLYAIP------LTSTSKRTVLSDLITVYAK-- 315
Query: 319 ERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDD 378
K +VF T D L+ S LHG++ Q
Sbjct: 316 ----GGKTIVFTKTKRDADEVSLALTN------------------SIASEALHGDISQHQ 353
Query: 379 RKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKG 438
R+++ GF K +LV+TDVAARGLD P V II Y+ P + +VHR GRT R G+ G
Sbjct: 354 RERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAG 413
Query: 439 EALLFLQPIETDYLRDLE 456
A+L + +R LE
Sbjct: 414 TAILMFTNSQRRTVRSLE 431
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 209/453 (46%), Gaps = 77/453 (16%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
+F ++ L L +++ + + PT +Q AIP++++G+ ++ A TG+GKT A+ PI+
Sbjct: 170 TFAEIDLGDALNENIR-RCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPII 228
Query: 84 H-LLQMREP---RVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHW-LVPGYIMGGEN 138
+++ R P R RT AL+L PTREL +Q++ A++ ++ +V Y GG
Sbjct: 229 SGIMRSRPPPRSRGSRTAYPLALILSPTRELSVQIHEEARKFAYQTGVKVVVAY--GGAP 286
Query: 139 RAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDI 198
++ L +G+ IL+ATPGRL+D L+ + ++++ DEAD +L++GF + I
Sbjct: 287 ITQQLRELERGVEILVATPGRLMDLLERARVSLQ-MIKYLALDEADRMLDMGFEPQIRKI 345
Query: 199 LEHLGSRNDTSNQNKNKMEPM-KRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSA 257
+E + M P +RQ +L SAT +++ R+A L + + + + SS
Sbjct: 346 VEQM------------DMPPRGERQTMLFSATFPKEIQRMASDFLADYIFLAVGRVGSST 393
Query: 258 HGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSL 317
+VQR V + + L+ +L +
Sbjct: 394 D----------------------------------LIVQRVEFVLDADKRSYLMDLLHAQ 419
Query: 318 FERQLSHK---VVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNM 374
K +VF+ T D L + P + D+ Q+
Sbjct: 420 RANGTHGKQALTLVFVETKRGADALENWLYNNGF-PATSIHGDRTQQ------------- 465
Query: 375 DQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARI 434
+R+ + F S + ILV+TDVAARGLD P V +I +D P + +YVHR+GRT R
Sbjct: 466 ---EREYALRSFKSGATPILVATDVAARGLDIPHVAHVINFDLPNDIDDYVHRIGRTGRA 522
Query: 435 GEKGEALLFLQPIETDYLRDL-ELHGASLTEYP 466
G+ G A F T R L EL + E P
Sbjct: 523 GKSGLATAFFNESNTPLARPLSELMQEANQEVP 555
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/435 (28%), Positives = 193/435 (44%), Gaps = 79/435 (18%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
+F G P + + GF PT IQAQ PVA+ + ++ A TG+GKTL YL P
Sbjct: 605 TFEATGFPPEILQEIH-AAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPA- 662
Query: 84 HLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEK 143
+ +R + G LVL PTREL Q+ A + R + + GG ++ +
Sbjct: 663 -FIHLRRYQNNPMLGPTVLVLAPTRELASQIQDEAVKF-GRSSRVSCTCLYGGTSKGLQL 720
Query: 144 ARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLG 203
L +G I++ATPGRL D L+ ++ + ++V DEAD +L++GF + I++ +
Sbjct: 721 RELERGADIVVATPGRLNDILEMRKISLH-QVSFLVLDEADRMLDMGFEPQIRKIVDEI- 778
Query: 204 SRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHT 263
P RQ L+ +AT ++V ++A LK+PV + +
Sbjct: 779 --------------PRNRQTLMYTATWPKEVTKIAGDLLKDPVQVNIG------------ 812
Query: 264 XXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLS 323
++D+ + Q V + L IL++ ++
Sbjct: 813 --------------------SIDELVANKSITQYVEVVPPLDKQRRLEQILRA---QERG 849
Query: 324 HKVVVFLST---CDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRK 380
KV++F ST CD QL D + F + + HG+ Q +R
Sbjct: 850 SKVIIFCSTKKMCD------------------QLARDIGRSFGAASI---HGDKSQAERD 888
Query: 381 KSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEA 440
F + ++ ILV+TDVAARGLD ++ +I YD P +YVHR+GRT R G G +
Sbjct: 889 NVLNQFRTGRAPILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVS 948
Query: 441 LLFLQPIETDYLRDL 455
F + Y DL
Sbjct: 949 YTFFSEQDWKYAGDL 963
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 139/242 (57%), Gaps = 29/242 (11%)
Query: 25 FTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVH 84
F+DL + ++D M + T IQA++IP M G ++ A TG+GKTLA+L P +
Sbjct: 88 FSDLPISDLTANAIRD-MNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIE 146
Query: 85 LL-QMR-EPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKE 142
LL ++R PR +GT +VL PTREL +Q + +A++L+ R+H GY++GG + E
Sbjct: 147 LLCRLRFSPR----NGTGVIVLCPTRELAIQTHNVAKELM-RYHSQTLGYVIGGIDLRGE 201
Query: 143 KARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHL 202
+L KGI++L+ATPGRLLDH+Q T SF Y ++ ++ DEAD ILE F + ++ I + L
Sbjct: 202 AEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLL 261
Query: 203 GSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISL-------KNPVMIGLDEQNS 255
+ RQ +L SAT EKV AK++ + V +G+D+ S
Sbjct: 262 PRQG--------------RQTVLFSATQTEKVEDFAKLTFGSKEERQRTLVYVGVDDHES 307
Query: 256 SA 257
A
Sbjct: 308 KA 309
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/429 (29%), Positives = 191/429 (44%), Gaps = 89/429 (20%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
+F +LGL L + D +G + PT +Q + IP A+ G+ +L A TG+GKT A+ PI+
Sbjct: 78 TFAELGLSQWLV-DVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPIL 136
Query: 84 HLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWL-VPGYI-----MGGE 137
H L E G AL L PTREL A QL +F L P + +GG
Sbjct: 137 HRLG------EDPYGVAALALAPTREL-------AAQLAEQFRALGAPLGLRCLAAIGGF 183
Query: 138 NRAKEKARLRKGISILIATPGRLLDHLQHTSSF--VYPNMRWIVFDEADSILELGFGKAL 195
+ + L + +++ATPGR+ + V+ +++V DEAD +L++ F + L
Sbjct: 184 DSLGQAKGLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDL 243
Query: 196 EDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS 255
I L P KRQ L SAT+++ + L ++S N
Sbjct: 244 RVIFGSL---------------PKKRQTFLFSATISDNLRSLLELSGNNSYFF------- 281
Query: 256 SAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILK 315
+A + FK L Q Y+ V ++ L +L
Sbjct: 282 ---------------------------EAYEGFKTVDTLKQLYIHVPPDAKELYLFYLLS 314
Query: 316 SLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMD 375
+ E + V+VF+STC + + +L +L P + L + K Q S ++ LH
Sbjct: 315 KMNEDNI-RSVIVFVSTCRTCQYLDFLLEEL-GHPAVSLHSHKPQ---SRRLAALH---- 365
Query: 376 QDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIG 435
F S K +L++TDVA+RGLD V +I YD P +Y+HRVGRTAR
Sbjct: 366 ---------NFKSSKVPVLLATDVASRGLDIQTVDLVINYDVPRYPRDYIHRVGRTARAT 416
Query: 436 EKGEALLFL 444
G ++ F+
Sbjct: 417 RGGLSISFI 425
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 194/415 (46%), Gaps = 77/415 (18%)
Query: 41 KMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTF 100
K+GFQ PT IQ QAIP+ +SG+ A TG+GKTLA+L PI L++++ E G
Sbjct: 163 KLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPI--LMKIKPGSKE---GVK 217
Query: 101 ALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRL 160
A++L PTREL Q ++L + + + ++ +K ILI+TP R
Sbjct: 218 AVILCPTRELAAQTTRECKKLAKGRKFYIK---LMTKDLSKSGNFKDMHCDILISTPLR- 273
Query: 161 LDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMK 220
LDH + ++V DE+D + ELGF + ++ +++ + + +
Sbjct: 274 LDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSIIRS---------- 323
Query: 221 RQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVT 280
L SATL + + LA+ + + V + + +NS+
Sbjct: 324 ----LFSATLPDSIETLARTIMHDAVRVIVGRKNSA------------------------ 355
Query: 281 VEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHH 340
+ L+++ + + G+ LL + +S F L+ V++F+ + + +
Sbjct: 356 -----------SSLIKQKL-IFAGTEKGKLLALRQS-FAESLNPPVLIFVQSKERAKELY 402
Query: 341 TVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVA 400
L+ F + +H ++D++ R+ + + K+ +L++T+V
Sbjct: 403 KELA-----------------FDDVRADVIHADLDEEQRQDAVDNLRAGKTWVLIATEVI 445
Query: 401 ARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDL 455
ARG+DF V C+I YD P AS Y+HR+GR+ R G GEA+ F + +LR++
Sbjct: 446 ARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFFTEEDKPFLRNI 500
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 192/423 (45%), Gaps = 73/423 (17%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP-I 82
SF L P + L GF+ P+ IQA A P + G+ + AATG+GKT+A+ P +
Sbjct: 95 SFAATALPPQV---LDCCKGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPAL 151
Query: 83 VHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKE 142
+H+ + + + LVL PTREL Q+ + + + + GG ++ +
Sbjct: 152 MHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVLCE-AGAPCGISSVCLYGGTSKGPQ 210
Query: 143 KARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHL 202
+ L+ G+ I+I TPGR+ D ++ + ++ ++V DEAD +L++GF + IL
Sbjct: 211 ISALKSGVDIVIGTPGRMKDLIEMGICRLN-DVSFVVLDEADRMLDMGFEPEVRAILSQT 269
Query: 203 GSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLK-NPVMIGLDEQNSSAHGKN 261
S RQ ++ SAT V++LA+ + NP+ + + ++ +A+
Sbjct: 270 AS---------------VRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSEDLAAN--- 311
Query: 262 HTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQ 321
H+V Q+V+ S SRL LL + +
Sbjct: 312 ---------------HDVM------------QIVEVLDDRSRDSRLVALL----DKYHKA 340
Query: 322 LSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKK 381
++V+VF+ T+L + WS +HG+ Q DR K
Sbjct: 341 QRNRVLVFVLYKREATRVETMLQRRGWS-----------------AVSVHGDKAQHDRTK 383
Query: 382 SFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
+ F ++++TDVA+RGLD P V+ +I Y P +YVHR+GRT R G+KG A
Sbjct: 384 ALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYVHRIGRTGRAGKKGVAH 443
Query: 442 LFL 444
F
Sbjct: 444 TFF 446
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 181/417 (43%), Gaps = 80/417 (19%)
Query: 25 FTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVH 84
F D L L + +K GF+ P+ IQ ++IP+A++G +L +A GTGKT A+ P +
Sbjct: 126 FEDYFLKRELLMGIYEK-GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 184
Query: 85 LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKA 144
+ + ++ ++LVPTREL LQ + ++L V GG + +
Sbjct: 185 KIDQDKNAIQ------VVILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDIV 237
Query: 145 RLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGS 204
RL + + +L+ TPGR+LD L V N +V DEAD +L F ++++++ +L
Sbjct: 238 RLYQPVHLLVGTPGRILD-LTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYL-- 294
Query: 205 RNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTX 264
P RQ L+ SAT V L P +I L ++
Sbjct: 295 -------------PSNRQILMFSATFPVTVKEFKDKYLPKPYVINLMDE----------- 330
Query: 265 XXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSH 324
+T++ + V+ KV C L +LF + +
Sbjct: 331 --------------LTLKGITQFYA----FVEERQKVHC----------LNTLFSKLQIN 362
Query: 325 KVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFL 384
+ ++F ++ + V+ +++L +S F +H M QD R + F
Sbjct: 363 QSIIFCNSVNRVELLAKKITELGYS-----------------CFYIHAKMLQDHRNRVFH 405
Query: 385 GFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
F + LV TD+ RG+D V +I +D P A Y+HRVGR+ R G G A+
Sbjct: 406 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAV 462
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 80/417 (19%)
Query: 25 FTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVH 84
F D L L + +K GF+ P+ IQ ++IP+A++G +L +A GTGKT A+ P +
Sbjct: 111 FEDYFLKRELLMGIYEK-GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 169
Query: 85 LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKA 144
+ + ++ ++LVPTREL LQ + ++L V GG + +
Sbjct: 170 KIDQEKNAIQ------VVILVPTRELALQTSQVCKELGKHLKIQV-MVTTGGTSLKDDII 222
Query: 145 RLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGS 204
RL + + +L+ TPGR+LD L + + ++ DEAD +L F ++E ++ +L
Sbjct: 223 RLYQPVHLLVGTPGRILD-LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYL-- 279
Query: 205 RNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTX 264
P RQ L+ SAT V L P +I L ++
Sbjct: 280 -------------PASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDE----------- 315
Query: 265 XXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSH 324
+T+ + + F V+ KV C L +LF + +
Sbjct: 316 --------------LTL-KGITQF---YAFVEERQKVHC----------LNTLFSKLQIN 347
Query: 325 KVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFL 384
+ ++F ++ + V+ +++L +S F +H M QD R + F
Sbjct: 348 QSIIFCNSVNRVELLAKKITELGYS-----------------CFYIHAKMLQDHRNRVFH 390
Query: 385 GFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
F + LV TD+ RG+D V +I +D P A Y+HRVGR+ R G G A+
Sbjct: 391 DFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAV 447
>AK119751
Length = 628
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 183/406 (45%), Gaps = 76/406 (18%)
Query: 44 FQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLL---QMREPRVERTDGTF 100
+ PT +Q AIP+ ++G+ ++ A TG+GKT A+ PI+ L + +R
Sbjct: 185 YTKPTPVQRYAIPIGLAGRDIMACAQTGSGKTAAFCFPIISGLVKAGYQPTGRQRKALPA 244
Query: 101 ALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRL 160
AL+L PTREL Q+Y A++ ++ + P I GG + + +G +L+ATP RL
Sbjct: 245 ALILAPTRELTSQIYEEARKFSYQ-SGIRPVVIYGGAPVVNQLREMERGCDMLVATPRRL 303
Query: 161 LDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPM- 219
D ++ + +R++ DEAD +L++GF + I+E M P
Sbjct: 304 SDLIER-ARVSLAAIRYLALDEADRMLDMGFEPQIRRIVE------------GEDMPPTG 350
Query: 220 KRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNV 279
+RQ +L SAT +++ RLA L + + + + SS +H
Sbjct: 351 QRQTMLFSATFPKEIQRLAADFLHDYIFLTVGRVGSSTD--------------LIAQHIE 396
Query: 280 TVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVD-F 338
V+Q +R + C + ++ L +VF+ T D
Sbjct: 397 YVQQD----------QKRETVLDC-------VNTVEGL--------TLVFVETKRGADQL 431
Query: 339 HHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTD 398
+L Q + ++ D + ++ ++ + FR S K ILV+TD
Sbjct: 432 EDYLLRQNLPATSIRGDKSQAEREMALRAFR------------------SGKCRILVATD 473
Query: 399 VAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFL 444
VAARGLD P V +I YD P + +YVHR+GRT R G+KG A F
Sbjct: 474 VAARGLDIPHVTHVINYDLPKDIDDYVHRIGRTGRAGKKGLATAFF 519
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 186/429 (43%), Gaps = 87/429 (20%)
Query: 22 SCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP 81
S F D L P L +QD GF+ P+ +Q + IP A+ G ++ +A +G GKT +
Sbjct: 50 SSGFRDFLLKPELLRAIQD-CGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF--- 105
Query: 82 IVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVP----GYIMGGE 137
++ LQ +P + ALVL TREL Y I + RF +P GG
Sbjct: 106 VLSSLQQIDPVAGQVG---ALVLCHTREL---AYQICHEF-ERFSKYLPEVKVAVFYGGV 158
Query: 138 NRAKEKARLRKGIS-ILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALE 196
+ K K L+ I++ TPGR+L L N+R + DE D
Sbjct: 159 HIKKHKDLLKNDCPHIVVGTPGRIL-ALAREKDLSLKNVRHFILDECDK----------- 206
Query: 197 DILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS- 255
+L+ L R D Q KM P +Q ++ SATL++++ + K +++P+ I +D++
Sbjct: 207 -MLDSLDMRRDV--QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 263
Query: 256 SAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILK 315
+ HG LVQ Y+K+S + L +L
Sbjct: 264 TLHG----------------------------------LVQHYIKLSEAEKNRKLNDLLD 289
Query: 316 SLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMD 375
+L Q VV+F+ + + +L + + P + +H M
Sbjct: 290 ALDFNQ----VVIFVKSVSRAAELNKLLCECNF-PAIS----------------IHSGMT 328
Query: 376 QDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIG 435
Q++R + F ILV+TD+ RG+D +V +I YD P A Y+HRVGR R G
Sbjct: 329 QEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFG 388
Query: 436 EKGEALLFL 444
KG A+ F+
Sbjct: 389 TKGLAITFV 397
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/429 (27%), Positives = 186/429 (43%), Gaps = 87/429 (20%)
Query: 22 SCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAP 81
S F D L P L +QD GF+ P+ +Q + IP A+ G ++ +A +G GKT +
Sbjct: 50 SSGFRDFLLKPELLRAIQD-CGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVF--- 105
Query: 82 IVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVP----GYIMGGE 137
++ LQ +P + ALVL TREL Y I + RF +P GG
Sbjct: 106 VLSSLQQIDPVAGQVG---ALVLCHTREL---AYQICHEF-ERFSKYLPEVKVAVFYGGV 158
Query: 138 NRAKEKARLRKGIS-ILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALE 196
+ K K L+ I++ TPGR+L L N+R + DE D
Sbjct: 159 HIKKHKDLLKNDCPHIVVGTPGRIL-ALAREKDLSLKNVRHFILDECDK----------- 206
Query: 197 DILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNS- 255
+L+ L R D Q KM P +Q ++ SATL++++ + K +++P+ I +D++
Sbjct: 207 -MLDSLDMRRDV--QEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKL 263
Query: 256 SAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILK 315
+ HG LVQ Y+K+S + L +L
Sbjct: 264 TLHG----------------------------------LVQHYIKLSEAEKNRKLNDLLD 289
Query: 316 SLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMD 375
+L Q VV+F+ + + +L + + P + +H M
Sbjct: 290 ALDFNQ----VVIFVKSVSRAAELNKLLCECNF-PAIS----------------IHSGMT 328
Query: 376 QDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIG 435
Q++R + F ILV+TD+ RG+D +V +I YD P A Y+HRVGR R G
Sbjct: 329 QEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADSYLHRVGRAGRFG 388
Query: 436 EKGEALLFL 444
KG A+ F+
Sbjct: 389 TKGLAITFV 397
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 128/481 (26%), Positives = 211/481 (43%), Gaps = 66/481 (13%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAM-SGQHMLVKAATGTGKTLAYLAPI 82
++ +L LHP L ++ ++GF+ PT IQ P A G+ ++ A TG+GKTLA+ PI
Sbjct: 199 AWRELRLHPLLITAVR-RLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPI 257
Query: 83 VHLL---QMREPRVERTDGTF-----------ALVLVPTRELCLQVYGIAQQLVHRFH-W 127
+ L Q + R+ R D + AL+L PTREL QV ++
Sbjct: 258 LQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLKEAAKFLRIQ 317
Query: 128 LVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYP--NMRWIVFDEADS 185
+VP I+GG + K++ L++ I++ TPGRL + + + + ++ + V DEAD
Sbjct: 318 VVP--IVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADR 375
Query: 186 ILELGFGKALEDILEHLGSRNDTSNQNKNK---------MEPMKRQNLLLSATLNEKVNR 236
++E G L+ I+E L N + Q ++ KRQ + SATL N
Sbjct: 376 MIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSATLALSAN- 434
Query: 237 LAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQ 296
+ + GL +SA K N + LP +L +
Sbjct: 435 -----FRKKLKRGLVTAKASAS--TDLSSIEALSKQARMKPNAEIVDLTKASILPEKLEE 487
Query: 297 RYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDT 356
+++ S + A L IL + + ++F ++ ++ ++L
Sbjct: 488 SFIECSDDDKDAYLYYILSVHGQ----GRTIIFCTSIAALRHLSSIL------------- 530
Query: 357 DKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYD 416
+ + V H M Q R K+ F +++ILV+TD ARG+DF V+ +I Y
Sbjct: 531 ----RVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRTVIHYQ 586
Query: 417 SPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPV 476
P Y+HR GRTAR G ++ + P + L SL++ LQ+ FPV
Sbjct: 587 LPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSL---CKSLSKENLQQ----FPV 639
Query: 477 N 477
+
Sbjct: 640 D 640
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 188/410 (45%), Gaps = 78/410 (19%)
Query: 43 GFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVH-LLQMREPRVERTD---G 98
G +A IQA + + G ++ +A TG GKTLA++ PI+ L+ RTD
Sbjct: 134 GIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILESLVNGTHKASRRTDYGRP 193
Query: 99 TFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPG 158
LVL+PTREL QV+ F L + GG + ++ +RKG+ I++ TPG
Sbjct: 194 PTVLVLLPTRELAKQVHTDFAFYGATF-GLSACCVYGGSDYRSQEMAIRKGVDIVVGTPG 252
Query: 159 RLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEP 218
R+ D ++ + + ++++ V DEAD +L +GF ++D+ LG D +
Sbjct: 253 RVKDFVEK-GTLNFRSLKFRVLDEADEMLNMGF---VDDVELILGKVEDVT--------- 299
Query: 219 MKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHN 278
K Q LL SAT+ E V +L+ LK+ GK
Sbjct: 300 -KVQTLLFSATIPEWVKKLSLRFLKS--------------GKK----------------- 327
Query: 279 VTVEQAVDDFKLPAQLVQRYVKVSC--GSRLAILLTILKSLFERQLSHKVVVFLSTCDSV 336
TV+ V D KL A R++ + C +R ++ I++ + R + ++F T +S
Sbjct: 328 -TVD-LVGDEKLKASASVRHLALPCNRAARAQVIPDIIR-CYSR--GGRTIIFTETKESA 382
Query: 337 DFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVS 396
+++ LHG++ Q R+ GF S K +LV+
Sbjct: 383 SDLSGLIAGSRA---------------------LHGDVAQAQREVILAGFRSGKFLVLVA 421
Query: 397 TDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQP 446
T+VAARGLD V+ IIQ + P + Y+HR GRT R G G A++ +P
Sbjct: 422 TNVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLFEP 471
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 200/459 (43%), Gaps = 86/459 (18%)
Query: 15 DKEGLFASC-----SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAA 69
D E F S SF D+GL L + GF+ P+ IQ + I G ++ +A
Sbjct: 28 DNEEFFTSYDEVFESFDDMGLQENLLRGIY-AYGFEKPSAIQQRGIVPFCKGLDVIQQAQ 86
Query: 70 TGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLV 129
+GTGKT + + I L Q+ VE +LVL PTREL Q+ + + L V
Sbjct: 87 SGTGKTATFCSGI--LQQLDYGLVE----CQSLVLAPTRELAQQIEKVMRALGDYLGVKV 140
Query: 130 PGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPN-MRWIVFDEADSILE 188
+ GG + +++ L G+ +++ TPGR+ D L+ S + P+ ++ V DEAD +L
Sbjct: 141 HACV-GGTSVREDQRILASGVHVVVGTPGRVFDMLRRQS--LRPDHIKMFVLDEADEMLS 197
Query: 189 LGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMI 248
GF + DI + L P K Q + SAT+ + + + + PV I
Sbjct: 198 RGFKDQIYDIFQLL---------------PPKIQVGVFSATMPPEALEITRKFMNKPVRI 242
Query: 249 GLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLA 308
+ + G + V VE+ +D+KL
Sbjct: 243 LVKRDELTLEG--------------IKQFYVNVEK--EDWKLDT---------------- 270
Query: 309 ILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVF 368
L L+E + V+F++T VD W TDK + V
Sbjct: 271 -----LCDLYETLAITQSVIFVNTRRKVD----------WL------TDKMRSR-DHTVS 308
Query: 369 RLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRV 428
HG+MDQ+ R F S S +L++TD+ ARG+D +V +I YD P + Y+HR+
Sbjct: 309 ATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRI 368
Query: 429 GRTARIGEKGEALLFLQPIETDYLRDLE-LHGASLTEYP 466
GR+ R G KG A+ F+ + L D++ + ++ E P
Sbjct: 369 GRSGRFGRKGVAINFVTRDDERMLFDIQRFYNVTIEELP 407
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 180/417 (43%), Gaps = 80/417 (19%)
Query: 25 FTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVH 84
F D L L + +K GF+ P+ IQ ++IP+A++G +L +A GTGKT A+ P +
Sbjct: 149 FEDYFLKRELLMGIYEK-GFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALE 207
Query: 85 LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKA 144
+ + ++ ++LVPTREL LQ + ++L + V GG + +
Sbjct: 208 KIDPEKNAIQ------VVILVPTRELALQTSQVCKELGKYLNIQV-MVSTGGTSLKDDIM 260
Query: 145 RLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGS 204
RL + + +L+ TPGR+LD L V + +V DEAD +L F ++E ++ L
Sbjct: 261 RLYQPVHLLVGTPGRILD-LTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFL-- 317
Query: 205 RNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTX 264
P RQ L+ SAT V + L P +I L ++
Sbjct: 318 -------------PANRQLLMFSATFPVTVKDFKEKYLPRPYVINLMDE----------- 353
Query: 265 XXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSH 324
+T++ + V+ KV C L +LF + +
Sbjct: 354 --------------LTLKGITQYYA----FVEERQKVHC----------LNTLFLKLQIN 385
Query: 325 KVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFL 384
+ ++F ++ + V+ +++L +S F +H M QD R + F
Sbjct: 386 QSIIFCNSVNRVELLAKKITELGYS-----------------CFYIHAKMLQDHRNRVFH 428
Query: 385 GFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEAL 441
F + LV TD+ RG+ V +I +D P + Y+HRVGR+ R G G A+
Sbjct: 429 DFRNGACRNLVCTDLFTRGIGIQAVNVVINFDFPKTSETYLHRVGRSGRFGHLGLAV 485
>Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment)
Length = 521
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 221/517 (42%), Gaps = 112/517 (21%)
Query: 20 FASCSFTDLG-LHPTLCAHLQDKMGFQA--PTRIQA--QAIPVAMSGQHMLVKAATGTGK 74
F+ C L L P L LQ +MG ++ P ++ A + I + + + + TG+GK
Sbjct: 33 FSGCPVAHLPRLDPRLVKPLQ-RMGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGK 91
Query: 75 TLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIM 134
TLAY PIV +L R+ R R ALV++PTR+L LQV + + V G +
Sbjct: 92 TLAYALPIVQMLATRKVRCLR-----ALVVLPTRDLALQVKEVFDAIAPVVGLSV-GSAV 145
Query: 135 GGENRAKEKARL----RKG-----------------ISILIATPGRLLDHLQHTSSFVYP 173
G + A E + L ++G + IL+ATPGRL+DH+ T F
Sbjct: 146 GQSSIADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKGFSLE 205
Query: 174 NMRWIVFDEADSILELGFGKALEDILEHLGSRNDT---SNQN------------------ 212
+++++V DE D +L + L +++ S + S+ N
Sbjct: 206 HLQYLVVDETDRMLREAYQSWLPTVIQLTRSSDQNHSWSDMNGETLLHPLTTIRRSGVER 265
Query: 213 --KNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXX 270
K K P + ++LSATL + ++L+++ L++P+++ NS GK
Sbjct: 266 GFKGKSFP-RLAKIVLSATLTQDPSKLSQLELQHPLLL-----NS---GKKR-------- 308
Query: 271 XXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFL 330
+++P +L Q Y K+ C S L L I+ L + K +VF
Sbjct: 309 -----------------YRIPTKL-QSY-KLVCKSNLKPLSLIV--LLQELRGEKCLVFT 347
Query: 331 STCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEK 390
S+ +S T+L E P F + RL + R+K+ F K
Sbjct: 348 SSVESSHRLSTLLEFFEDLP-----------FKFSEYSRLQ---RESTRRKTLDAFKEGK 393
Query: 391 SAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIET- 449
+L+ TD ARG+ ++ +I YD P Y+HR GRTAR GE G FL+ E
Sbjct: 394 IDVLIGTDRMARGIHIDGLRYVINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVK 453
Query: 450 ---DYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHK 483
L+ + SL P + V PV L K
Sbjct: 454 AFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKK 490
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/445 (26%), Positives = 190/445 (42%), Gaps = 81/445 (18%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
SF D+GL L + GF+ P+ IQ + I G ++ +A +GTGKT + + I+
Sbjct: 42 SFDDMGLQENLLRGIY-AYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL 100
Query: 84 HLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEK 143
L + ALVL PTREL Q+ + + L V + GG + +++
Sbjct: 101 QQLDYAVVECQ------ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGTSVREDQ 153
Query: 144 ARLRKGISILIATPGRLLDHLQHTSSFVYPN-MRWIVFDEADSILELGFGKALEDILEHL 202
L G+ +++ TPGR+ D L+ S + P+ ++ V DEAD +L GF + DI + L
Sbjct: 154 RILASGVHVVVGTPGRVFDMLRRQS--LRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLL 211
Query: 203 GSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNH 262
P K Q + SAT+ + + + + PV I + + G
Sbjct: 212 ---------------PSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEG--- 253
Query: 263 TXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQL 322
+ Q YV V + L L L+E
Sbjct: 254 -------------------------------IKQFYVNV---EKEEWKLDTLCDLYETLA 279
Query: 323 SHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKS 382
+ V+F++T VD W TD K + V HG+MDQ+ R
Sbjct: 280 ITQSVIFVNTRRKVD----------WL------TD-KMRGRDHTVSATHGDMDQNTRDII 322
Query: 383 FLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALL 442
F S S +L++TD+ ARG+D +V +I YD P + Y+HR+GR+ R G KG A+
Sbjct: 323 MREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAIN 382
Query: 443 FLQPIETDYLRDLE-LHGASLTEYP 466
F+ + L D++ + + E P
Sbjct: 383 FVTRDDERMLFDIQRFYNVVIEELP 407
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/464 (24%), Positives = 200/464 (43%), Gaps = 86/464 (18%)
Query: 14 EDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTG 73
E G+ SF +G+ L + GF+ P+ IQ +A+ +SG+ ++ +A +GTG
Sbjct: 22 ETSPGVEVISSFDQMGIREDLLRGIY-AYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTG 80
Query: 74 KTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYI 133
KT + ++ V+ AL+L PTREL Q + + + V I
Sbjct: 81 KTSMISLSVCQIVDTAVREVQ------ALILSPTRELAAQTERVMLAIGDYINIQVHACI 134
Query: 134 MGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGK 193
GG++ ++ +L G+ ++ TPGR+ D ++ + ++ ++ DEAD +L GF
Sbjct: 135 -GGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKR-RTLRTRAIKLLILDEADEMLGRGFKD 192
Query: 194 ALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQ 253
+ D+ +L P + Q L+SATL ++ + + +PV I +
Sbjct: 193 QIYDVYRYL---------------PPELQVCLISATLPHEILEMTSKFMTDPVRILVKRD 237
Query: 254 NSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTI 313
+ G + V VE+ +++K
Sbjct: 238 ELTLEG--------------IKQFFVAVEK--EEWKFDT--------------------- 260
Query: 314 LKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGN 373
L L++ + V+F +T VD+ ++ + + V +HG+
Sbjct: 261 LCDLYDTLTITQAVIFCNTKRKVDW-----------------LTERMRSNNFTVSAMHGD 303
Query: 374 MDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTAR 433
M Q +R F S + +L++TDV ARGLD +V +I YD P Y+HR+GR+ R
Sbjct: 304 MPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGR 363
Query: 434 IGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVN 477
G KG A+ F++ + LRD+E + Y Q +D P+N
Sbjct: 364 FGRKGVAINFVKKEDIRILRDIEQY------YSTQ--IDEMPMN 399
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 197/456 (43%), Gaps = 79/456 (17%)
Query: 14 EDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTG 73
E G+ SF +G+ L + GF+ P+ IQ +A+ +SG+ ++ +A +GTG
Sbjct: 22 ETSPGVEVISSFDQMGIRDDLLRGIY-AYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTG 80
Query: 74 KTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYI 133
KT + ++ V+ AL+L PTREL Q + + + V I
Sbjct: 81 KTSMISLSVCQIVDTAVREVQ------ALILSPTRELAAQTERVMLAIGDFINIQVHACI 134
Query: 134 MGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGK 193
GG++ ++ +L G+ ++ TPGR+ D ++ + ++ ++ DEAD +L GF
Sbjct: 135 -GGKSIGEDIRKLEHGVHVVSGTPGRVCDMIKR-RTLRTRAIKLLILDEADEMLGRGFKD 192
Query: 194 ALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQ 253
+ D+ +L P + Q L+SATL ++ + + +PV I +
Sbjct: 193 QIYDVYRYL---------------PPELQVCLISATLPHEILEMTSKFMTDPVRILVKRD 237
Query: 254 NSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTI 313
+ G + V VE+ +++K
Sbjct: 238 ELTLEG--------------IKQFFVAVEK--EEWKFDT--------------------- 260
Query: 314 LKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGN 373
L L++ + V+F +T VD+ ++ + + V +HG+
Sbjct: 261 LCDLYDTLTITQAVIFCNTKRKVDW-----------------LTERMRSNNFTVSAMHGD 303
Query: 374 MDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTAR 433
M Q +R F S + +L++TDV ARGLD +V +I YD P Y+HR+GR+ R
Sbjct: 304 MPQKERDAIMGEFRSGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGR 363
Query: 434 IGEKGEALLFLQPIETDYLRDLE-LHGASLTEYPLQ 468
G KG A+ F++ + LRD+E + + E P+
Sbjct: 364 FGRKGVAINFVKKEDIRILRDIEQYYSTQIDEMPMN 399
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 191/454 (42%), Gaps = 69/454 (15%)
Query: 24 SFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIV 83
SF +LGL L L+ K G T IQ +AIP+ + G+ ++ KA TG+GKT AYL P++
Sbjct: 93 SFDELGLDEQLKRALR-KKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPML 151
Query: 84 H-LLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKE 142
H LL++ R +LVPTRELC QV+ A L+ + + K+
Sbjct: 152 HELLKLSAEGRIRKSAPNVFILVPTRELCQQVHNEASSLLEFCTSKLKVVQVNASMSDKD 211
Query: 143 -KARLRKGISILIATPGRLLDHLQH---TSSFVYPNMRWIVFDEADSILELGFGKALEDI 198
K L +IL+ TP + + S + ++ ++ DEAD +L ++ +
Sbjct: 212 IKVALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKAL 271
Query: 199 LEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAH 258
+ H+ P Q++L+SAT + + +L K+ L NP ++ L E
Sbjct: 272 VPHI---------------PRSCQSILMSATSSADIEKLTKLLLHNPFILTLTE------ 310
Query: 259 GKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLF 318
V A DD +P + Q ++ ++ +L +LK
Sbjct: 311 ----------------------VGHAKDDL-IPKNVQQFWISCDAKDKMLYILVLLKLEL 347
Query: 319 ERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGL---QLDTDKKQKFISCKVFRLHGNMD 375
+ KV++F+++ DS L + + +L + + I RL +
Sbjct: 348 ---IQKKVLIFVNSIDSAFKLRLFLEKFGIRSSVLNAELPQNSRLHIIQAFNARLFDYLI 404
Query: 376 QDDRKKSFLGFSSEKS-------------AILVSTDVAARGLDFPKVKCIIQYDSPGEAS 422
D KS + K L + RG+DF V ++ YD P + +
Sbjct: 405 ATDDNKSKEERQANKGNKKDSRVSRKQLQQTLDAEFGVVRGIDFKNVFTVVNYDMPPDPA 464
Query: 423 EYVHRVGRTARIGEKGEALLFLQPIETDYLRDLE 456
YVHRVGRT R + G ++ + P E D+E
Sbjct: 465 GYVHRVGRTGRANKTGASISLVSPKENGIFEDIE 498
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 176/409 (43%), Gaps = 83/409 (20%)
Query: 59 MSGQHMLVKAATGTGKTLAYLAPIVHLL----------QMREPRVERTDGTFALVLVPTR 108
++G+ ++ A TG+GKT A+ P+V L + R ALVL PTR
Sbjct: 1 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 60
Query: 109 ELCLQVYGIAQQLVHRFHW-LVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHT 167
EL Q+ A++ + +V Y GG + L +G IL+ATPGRL+D ++
Sbjct: 61 ELAAQINEEAKKFSFQTGLRVVVAY--GGTPMYNQLRDLERGADILVATPGRLVDMVER- 117
Query: 168 SSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLS 227
S ++++V DEAD +L++GF + I+E + N RQ +L S
Sbjct: 118 SKVSLEAIKYLVMDEADRMLDMGFEPQIRKIVERM-----------NMPRKSVRQTMLFS 166
Query: 228 ATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDD 287
AT ++ RLA L N + I + SS
Sbjct: 167 ATFPPEIQRLASDFLSNYIFITVGRVGSSTD----------------------------- 197
Query: 288 FKLPAQLVQRYVKVSCGSRLAILLTILK----SLFERQLSHKV-VVFLSTCDSVDFHHTV 342
++Q+ +S G + LL +L+ + +L + +VF+ T D
Sbjct: 198 -----LIMQKVELLSDGEKRGYLLDLLQRQSVGVANSKLQQPLTLVFVETKREADSLRYW 252
Query: 343 LSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAAR 402
L + P + D+ Q+ +R+ + F + + I+V+TDVA+R
Sbjct: 253 LYSKGF-PATAIHGDRTQQ----------------ERESALRSFKTGLTPIMVATDVASR 295
Query: 403 GLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDY 451
GLD P V +I YD P +YVHR+GRT R G+ G A F E+D+
Sbjct: 296 GLDVPNVAHVINYDLPKSIEDYVHRIGRTGRAGKAGSATAFF--TESDH 342
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 194/441 (43%), Gaps = 77/441 (17%)
Query: 18 GLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLA 77
G F+ SF ++G + L+ GF P+ IQA A + G+ ++ +G+GKTLA
Sbjct: 247 GFFSRRSFKEIGCSDEILGALR-SFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLA 305
Query: 78 YLAPIVHLLQMRE--------PRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLV 129
YL P+V L+ E PR R +VL PT EL QV + +
Sbjct: 306 YLCPVVQNLRKEEVEGLHRSSPRNPRV-----VVLTPTAELASQVLNNCRSISKSGVPFR 360
Query: 130 PGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFV-YPNMRWIVFDEADSILE 188
GG + + L + + +LIATPGR L LQ FV N+R +V DE D +
Sbjct: 361 SMVATGGFRQKTQLESLDQELDVLIATPGRFLYLLQE--GFVQLNNLRCVVLDEVDIL-- 416
Query: 189 LGFG-KALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKV-NRLAKISLKNPV 246
+G ++ E +L L + + P+ Q L ++ATL + N++ + +
Sbjct: 417 --YGEESFEQVLHQLIT-----------VAPLTTQYLFVTATLPLDIYNKVVETFPDCEL 463
Query: 247 MIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSR 306
++G +S+ + V+ + DD + ++ + + ++
Sbjct: 464 IMGPGVHRTSSR-----------------LEEILVDCSGDDNE------EKNPETAFSNK 500
Query: 307 LAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCK 366
+ L+ I+ E K ++F C+ ++ V + L D+K I K
Sbjct: 501 KSALVKII----EESPVRKTIIF---CNKIETCRKVENALRR-------VDRKASQI--K 544
Query: 367 VFRLHGNMDQDDR---KKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASE 423
V H +DQ R K FL + S LV TD A+RG+DF V ++ +D P + SE
Sbjct: 545 VLPFHAALDQQQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDPSE 604
Query: 424 YVHRVGRTAR-IGEKGEALLF 443
YV RVGRTAR G+A +F
Sbjct: 605 YVRRVGRTARGASGNGKAFVF 625
>Os06g0697200 DEAD/DEAH box helicase domain containing protein
Length = 308
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 78/294 (26%)
Query: 160 LLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPM 219
LD+L ++F++ + R++ DEAD +++LGF + ++ +H +
Sbjct: 5 FLDYLNVLNNFLHMS-RYLTLDEADRLVDLGFEDDIREVFDHFKA--------------- 48
Query: 220 KRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKHNV 279
+RQ LL SAT+ EK+ AK +L P+++ + ++ N+
Sbjct: 49 QRQTLLFSATMPEKIQNFAKSALVKPIIVNVGRAGAA---------------------NL 87
Query: 280 TVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFH 339
V Q V+ YVK +R+ LL L+ + V+VF C+
Sbjct: 88 DVIQEVE-----------YVKEE--ARIIYLLECLQ-----KTPPPVLVF---CEH---- 122
Query: 340 HTVLSQLEWSPGLQLDTDKKQKFISCK---VFRLHGNMDQDDRKKSFLGFSSEKSAILVS 396
+ D D Q+F+ K +HG D ++RK +F F + + +LV+
Sbjct: 123 -------------KADVDYIQEFLLLKGVEAVAIHGGKDDEERKDAFKSFKASEKDVLVA 169
Query: 397 TDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETD 450
TDVA++GLD P ++ +I YD P E YVHR+GRT R G+ G A F+ +T+
Sbjct: 170 TDVASKGLDIPDIQHVINYDMPAEIENYVHRIGRTGRRGKTGVATTFINKNQTE 223
>Os07g0517000 DEAD/DEAH box helicase domain containing protein
Length = 524
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 152/350 (43%), Gaps = 74/350 (21%)
Query: 218 PMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTXXXXXXXXXXXXKH 277
P RQ LL SAT + V LA++SLK+P I + E+ ++A
Sbjct: 8 PKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTA-------------------- 47
Query: 278 NVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVD 337
P L Q + V +L +L + +K R L +++VFLS+ V
Sbjct: 48 ------------TPDTLEQYAMIVPLEQKLNMLWSFIK----RHLKSRILVFLSSVKQVK 91
Query: 338 FHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVST 397
F + V +L PG+ L C +HG M + ++ F E ++L ST
Sbjct: 92 FVYEVFKKLR--PGISL---------RC----MHGRMKYEVQQAIVAEFK-EGHSVLFST 135
Query: 398 DVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLEL 457
D+ ARGLD V ++Q D P + Y+HRVGRTAR ++G+AL+FL P E L L+
Sbjct: 136 DIFARGLDIEDVDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFLCPEEEKMLEKLK- 194
Query: 458 HGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLAR 517
A+ ++ P+ + + +QIS + + S + ++L +
Sbjct: 195 --AAESKIPIH-------IKKPNTEQLQQIS-----------QNIASVLVQYPNLQQLGK 234
Query: 518 DAFCSWVRA-YTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLLGRSHQ 566
AF +++++ Y E+ + + A S GL P + SH+
Sbjct: 235 RAFVTYLKSVYLQSDKEVFDLSRFSMENFAAYAASLGLPVTPKIRFVSHK 284
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 29/237 (12%)
Query: 28 LGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQ 87
LG+ P + L + G IQ + AM G+ M+ +A TGTGKTLA+ PI+ +
Sbjct: 88 LGISPWIVERLAAR-GITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRIL 146
Query: 88 MREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVP---GYIMGGENRAKEKA 144
+ A++L PTREL A+Q+ F P + GG + +
Sbjct: 147 RHNEKNGSGRNPLAIILAPTREL-------ARQVEKEFKESAPLDSLCVYGGVPISHQMR 199
Query: 145 RLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGS 204
L G+ +++ TPGR++D L+ ++++V DEAD +L +GF + +E I+E+L
Sbjct: 200 ALNYGVDVVVGTPGRIIDLLRR-GVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL-- 256
Query: 205 RNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGL--DEQNSSAHG 259
P RQ++L SAT+ + ++ LK+P++I L DE G
Sbjct: 257 -------------PQNRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEG 300
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 20/151 (13%)
Query: 100 FALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGR 159
A+VL PTREL QV ++ + + GG +++ +L G+ ++I TPGR
Sbjct: 12 LAIVLAPTRELAKQV----EREFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGTPGR 67
Query: 160 LLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPM 219
++D L+ + +R++V DEAD +L +GF + +E IL+ + P
Sbjct: 68 VIDLLKR-GALNLSEVRFVVLDEADQMLSVGFDEDVETILDRV---------------PP 111
Query: 220 KRQNLLLSATLNEKVNRLAKISLKNPVMIGL 250
KRQ L+ SAT+ + RL + LKNPV I L
Sbjct: 112 KRQTLMFSATMPTWIQRLTQKYLKNPVTIDL 142
>AK063048
Length = 250
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 370 LHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVG 429
+H M Q R S F S + IL +TDVA+RGLD P V II ++ P EYVHRVG
Sbjct: 84 IHSLMKQRQRIASLAKFKSLQVPILFATDVASRGLDIPSVDLIINHNVPFVPKEYVHRVG 143
Query: 430 RTARIGEKGEALLFLQPIETDYLRDLELH-GASLTEYPLQK 469
RTAR G G A+ + + + +E G L+EY +++
Sbjct: 144 RTARAGRCGTAITLVTQYDVKLMHKIEDRVGKQLSEYRVKE 184
>Os02g0201900 DEAD/DEAH box helicase domain containing protein
Length = 124
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 5/121 (4%)
Query: 370 LHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVG 429
+HG+ ++R++S F + + +++V T V RG+D KV+ +I +D P EYVH+VG
Sbjct: 2 IHGDKTMNERRESLRRFLTGEVSVVVCTGVLGRGMDLLKVRQVILFDMPNSIDEYVHQVG 61
Query: 430 RTARIGEKGEALLFLQPIETDYLRD----LELHGASL-TEYPLQKVLDSFPVNGQRLHKR 484
R +R+G +G A++F+ + + R+ L+ GA + E K P+ G + K
Sbjct: 62 RASRMGVEGMAIVFVNEEDRNLFRELVQILKTAGAPIPRELANSKYTTGIPLGGGKKRKL 121
Query: 485 K 485
K
Sbjct: 122 K 122
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,973,971
Number of extensions: 706824
Number of successful extensions: 1699
Number of sequences better than 1.0e-10: 52
Number of HSP's gapped: 1549
Number of HSP's successfully gapped: 83
Length of query: 591
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 485
Effective length of database: 11,501,117
Effective search space: 5578041745
Effective search space used: 5578041745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 159 (65.9 bits)