BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0669200 Os04g0669200|AK067373
(190 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0669200 Similar to Ethylene response factor 2 (Ethylen... 116 9e-27
Os04g0610400 Similar to AP2 domain containing protein RAP2.... 79 2e-15
Os02g0189600 Similar to Ethylene response factor 2 (Ethylen... 77 6e-15
Os01g0797600 Ethylene responsive element binding factor3 (O... 75 3e-14
Os06g0691100 Pathogenesis-related transcriptional factor an... 74 5e-14
Os02g0594300 Similar to Enhancer of shoot regeneration ESR1 71 6e-13
Os01g0224100 Similar to DNA binding protein-like protein 70 6e-13
Os05g0497200 Similar to Ethylene-responsive transcription f... 70 6e-13
Os04g0399800 Similar to Ethylene-responsive transcription f... 70 9e-13
Os02g0520000 70 1e-12
Os05g0497300 Similar to Ethylene response factor 2 70 1e-12
Os02g0158000 Similar to Ethylene response factor 2 (Ethylen... 69 2e-12
Os01g0657400 Similar to Ethylene-responsive transcription f... 69 3e-12
Os09g0434500 Similar to Ethylene response factor 2 68 3e-12
AK100167 67 6e-12
Os05g0361700 Similar to EREBP-2 protein (Fragment) 67 7e-12
Os10g0562900 Pathogenesis-related transcriptional factor an... 65 2e-11
Os03g0815800 Similar to Ethylene-responsive transcription f... 65 2e-11
Os03g0182800 Similar to Ethylene responsive element binding... 65 3e-11
Os02g0654700 Similar to Ethylene-responsive transcription f... 65 3e-11
Os09g0287000 Similar to Ethylene-responsive transcription f... 65 4e-11
Os07g0617000 Similar to Ethylene response factor 2 65 4e-11
Os02g0655200 Similar to Ethylene responsive element binding... 64 5e-11
Os06g0194000 Similar to Ethylene-responsive transcription f... 64 5e-11
Os02g0782700 Similar to Transcription factor EREBP1 64 5e-11
Os09g0286600 Pathogenesis-related transcriptional factor an... 64 6e-11
Os07g0669500 Similar to Branched silkless1 64 7e-11
Os12g0168100 Similar to AP2 domain containing protein RAP2.... 64 8e-11
>Os04g0669200 Similar to Ethylene response factor 2 (Ethylene response factor
3)
Length = 190
Score = 116 bits (291), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 58/70 (82%), Positives = 58/70 (82%)
Query: 1 MVGGEVMCEAAAPRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRN 60
MVGGEVMCEAAAPRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDS RN
Sbjct: 1 MVGGEVMCEAAAPRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSAEAAARAYDVAARN 60
Query: 61 LRGPLARTNF 70
LRGPLARTNF
Sbjct: 61 LRGPLARTNF 70
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/52 (67%), Positives = 35/52 (67%)
Query: 139 DAGCHXXXXXXXXXXXXXXXXXTVRSRVAAFDLNLPPPLDRDHVDLCTDLRL 190
DAGCH TVRSRVAAFDLNLPPPLDRDHVDLCTDLRL
Sbjct: 139 DAGCHSDCASSASVVDDADDASTVRSRVAAFDLNLPPPLDRDHVDLCTDLRL 190
>Os04g0610400 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 222
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 43/58 (74%)
Query: 13 PRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
PR+RGVRKRPWGR+AAEIRDPA++ARVWLGT+D+ + RGP A+TNF
Sbjct: 24 PRFRGVRKRPWGRYAAEIRDPARKARVWLGTFDTAEAAARAYDSAALHFRGPKAKTNF 81
>Os02g0189600 Similar to Ethylene response factor 2 (Ethylene response factor
3)
Length = 199
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 47/68 (69%)
Query: 3 GGEVMCEAAAPRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLR 62
GG +A A R+RGVRKRPWGR+AAEIRDPAK+ARVWLGTYDS R LR
Sbjct: 4 GGAAEEDAEAARFRGVRKRPWGRYAAEIRDPAKKARVWLGTYDSAEDAARAYDAAARALR 63
Query: 63 GPLARTNF 70
G A+TNF
Sbjct: 64 GAKAKTNF 71
>Os01g0797600 Ethylene responsive element binding factor3 (OsERF3)
Length = 235
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 41/58 (70%)
Query: 13 PRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
P YRGVRKRPWGR+AAEIRDPAK++RVWLGTYD+ R RG A+TNF
Sbjct: 32 PHYRGVRKRPWGRYAAEIRDPAKKSRVWLGTYDTAEEAARAYDAAAREFRGAKAKTNF 89
>Os06g0691100 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 188
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 41/57 (71%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RYRGVRKRP GR+AAEIRDPAK+ +WLGT+DS R+LRGP ARTNF
Sbjct: 16 RYRGVRKRPSGRYAAEIRDPAKKTPIWLGTFDSAEVAARAYDDAARSLRGPTARTNF 72
>Os02g0594300 Similar to Enhancer of shoot regeneration ESR1
Length = 345
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 39/57 (68%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RYRGVR+RPWGRFAAEIRDPA + R WLGT+D+ R +RG ARTNF
Sbjct: 58 RYRGVRRRPWGRFAAEIRDPASKERRWLGTFDTAEQAACAYDVAARAMRGTRARTNF 114
>Os01g0224100 Similar to DNA binding protein-like protein
Length = 380
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%)
Query: 8 CEAAAPRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLAR 67
+ A PR+RGVR+RPWG++AAEIRDP +R RVWLGT+D+ LRG A
Sbjct: 143 VDGAEPRFRGVRRRPWGKYAAEIRDPWRRVRVWLGTFDTAEEAAKVYDTAAIQLRGRDAT 202
Query: 68 TNF 70
TNF
Sbjct: 203 TNF 205
>Os05g0497200 Similar to Ethylene-responsive transcription factor 11
(Ethylene-responsive element binding factor 11)
(EREBP-11) (AtERF11)
Length = 189
Score = 70.5 bits (171), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 38/57 (66%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
YRGVRKRPWGR+AAEIRDP K+ RVWLGTYD+ LRG ARTNF
Sbjct: 22 HYRGVRKRPWGRYAAEIRDPWKKTRVWLGTYDTPVEAALAYDRAAVALRGVKARTNF 78
>Os04g0399800 Similar to Ethylene-responsive transcription factor 12
(Ethylene-responsive element binding factor 12)
(EREBP-12) (AtERF12)
Length = 292
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 39/57 (68%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RY GVR+RPWGR+AAEIRDPA + R WLGT+D+ R+LRG ARTNF
Sbjct: 51 RYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARSLRGARARTNF 107
>Os02g0520000
Length = 239
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 38/57 (66%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RY GVR+RPWGR+AAEIRDPA + R WLGT+D+ R +RG ARTNF
Sbjct: 39 RYLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAEEAAVAYDRAARTIRGAAARTNF 95
>Os05g0497300 Similar to Ethylene response factor 2
Length = 236
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 40/57 (70%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
+RGVRKRPWGR+AAEIRDPAK++RVWLGT+D+ R RG A+TNF
Sbjct: 37 HFRGVRKRPWGRYAAEIRDPAKKSRVWLGTFDTAEEAARAYDAAAREYRGAKAKTNF 93
>Os02g0158000 Similar to Ethylene response factor 2 (Ethylene response factor
3)
Length = 203
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 40/57 (70%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RYRGVR+RP GR+AAEIRDPAK+ +WLGT+DS R+LRG ARTNF
Sbjct: 12 RYRGVRRRPSGRYAAEIRDPAKKTPIWLGTFDSAEAAARAYDAAARSLRGAAARTNF 68
>Os01g0657400 Similar to Ethylene-responsive transcription factor 5
(Ethylene-responsive element binding factor 5) (EREBP-5)
(AtERF5)
Length = 292
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 40/61 (65%)
Query: 10 AAAPRYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTN 69
A + ++RGVR+RPWG+FAAEIRDP + RVWLGT+D+ LRGP A TN
Sbjct: 91 APSTKFRGVRRRPWGKFAAEIRDPWRGVRVWLGTFDTAEEAARVYDNAAIQLRGPSATTN 150
Query: 70 F 70
F
Sbjct: 151 F 151
>Os09g0434500 Similar to Ethylene response factor 2
Length = 396
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
+YRG+R+RPWG++AAEIRDP+K RVWLGTY++ R +RG A+ NF
Sbjct: 135 QYRGIRQRPWGKWAAEIRDPSKGVRVWLGTYNTAEEAARAYDAEARKIRGKKAKVNF 191
>AK100167
Length = 571
Score = 67.4 bits (163), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
++RG+R+RPWG++AAEIRDP K RVWLGT++S R +RG A+ NF
Sbjct: 114 QFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNF 170
>Os05g0361700 Similar to EREBP-2 protein (Fragment)
Length = 198
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 2 VGGEVMCEAAAPR------YRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXX 55
G E A AP YRG+R+RPWGR+AAEIRDP K ARVWLGTY +
Sbjct: 35 AGDESFAAAKAPAPGRKTAYRGIRRRPWGRWAAEIRDPRKGARVWLGTYATAEEAARAYD 94
Query: 56 XXXRNLRGPLARTNF 70
R++RG A+ NF
Sbjct: 95 VAARDIRGAKAKLNF 109
>Os10g0562900 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 273
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKR-ARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RYRGVR+RPWG++AAEIRDPA++ ARVWLGTYD+ LRG A NF
Sbjct: 89 RYRGVRQRPWGKYAAEIRDPARKGARVWLGTYDTAVEAARAYDRAAFQLRGSKAILNF 146
>Os03g0815800 Similar to Ethylene-responsive transcription factor 5
(Ethylene-responsive element binding factor 5) (EREBP-5)
(AtERF5)
Length = 241
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 37/57 (64%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
R+RGVR+RPWGRFAAEIRDP R R+WLGT+D+ LRG A TNF
Sbjct: 81 RFRGVRQRPWGRFAAEIRDPHLRRRLWLGTFDTAEEAAAAYDAASVRLRGSSAATNF 137
>Os03g0182800 Similar to Ethylene responsive element binding factor3 (OsERF3)
Length = 326
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 36/57 (63%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
+YRGVR+RP GRFAAEIRDP K RVWLGTY S R +RG AR NF
Sbjct: 121 KYRGVRRRPSGRFAAEIRDPKKGRRVWLGTYGSAEEAAMAYDREARRIRGKGARLNF 177
>Os02g0654700 Similar to Ethylene-responsive transcription factor 5
(Ethylene-responsive element binding factor 5) (EREBP-5)
(AtERF5)
Length = 303
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 GGEVMCEAAAPRYRGVRKRPWGRFAAEIRDPAKR-ARVWLGTYDSXXXXXXXXXXXXRNL 61
G V + YRGVR+RPWG+FAAEIRDPAK ARVWLGT+DS +
Sbjct: 137 GEAVAVASRGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFDSAEEAAVAYDRAAYRM 196
Query: 62 RGPLARTNF 70
RG A NF
Sbjct: 197 RGSRALLNF 205
>Os09g0287000 Similar to Ethylene-responsive transcription factor 5
(Ethylene-responsive element binding factor 5) (EREBP-5)
(AtERF5)
Length = 250
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 36/54 (66%)
Query: 17 GVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
GVR+RPWGR+A+EIRDP K ARVWLGT+D+ R + G ARTNF
Sbjct: 104 GVRQRPWGRWASEIRDPVKGARVWLGTFDTAVEAARAYDAEARRIHGHKARTNF 157
>Os07g0617000 Similar to Ethylene response factor 2
Length = 342
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 37/57 (64%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RYRG+R+RPWG++AAEIRDP K RVWLGT+ + R +RG A+ NF
Sbjct: 111 RYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFGTAEEAAMAYDVEARRIRGKKAKVNF 167
>Os02g0655200 Similar to Ethylene responsive element binding factor3 (OsERF3)
Length = 344
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKR-ARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
+YRGVR+RPWG+FAAEIRDP KR +RVWLGTYD+ +RG A NF
Sbjct: 154 KYRGVRQRPWGKFAAEIRDPKKRGSRVWLGTYDTAIEAARAYDRAAFRMRGAKAILNF 211
>Os06g0194000 Similar to Ethylene-responsive transcription factor 3
(Ethylene-responsive element binding factor 3 homolog)
(EREBP-5) (NtERF5)
Length = 362
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
++RG+R+RPWG++AAEIRDP K RVWLGT++S R +RG A+ NF
Sbjct: 114 QFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNF 170
>Os02g0782700 Similar to Transcription factor EREBP1
Length = 365
Score = 64.3 bits (155), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
++RG+R+RPWG++AAEIRDP K RVWLGT++S R +RG A+ NF
Sbjct: 119 QFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNF 175
>Os09g0286600 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 225
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%)
Query: 15 YRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
YRG+R+RPWGR+A+EIRDP K RVWLGT+D+ R + G A+TNF
Sbjct: 107 YRGIRQRPWGRWASEIRDPVKGIRVWLGTFDTAEGAARAYDDEVRRIYGGNAKTNF 162
>Os07g0669500 Similar to Branched silkless1
Length = 318
Score = 63.9 bits (154), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
R+ GVR+RPWGR+AAEIRDP + R WLGT+D+ +++G ARTNF
Sbjct: 57 RFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGAQARTNF 113
>Os12g0168100 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 341
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 37/57 (64%)
Query: 14 RYRGVRKRPWGRFAAEIRDPAKRARVWLGTYDSXXXXXXXXXXXXRNLRGPLARTNF 70
RYRGVR+RPWG++AAEIRDP K ARVWLGT+D+ RG A+ NF
Sbjct: 155 RYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEDAARAYDGAALRFRGSRAKLNF 211
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.141 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,583,090
Number of extensions: 86577
Number of successful extensions: 366
Number of sequences better than 1.0e-10: 47
Number of HSP's gapped: 372
Number of HSP's successfully gapped: 48
Length of query: 190
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 95
Effective length of database: 12,075,471
Effective search space: 1147169745
Effective search space used: 1147169745
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 153 (63.5 bits)