Os02g0655200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene responsive element binding factor3 (OsERF3).
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Os02g0655200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene responsive element binding factor3 (OsERF3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 211.33 | 0.683 | 8.47 | 2.67 | 1.07 | -0.463 | -1.77 | -3 | 0.914 | 3.42 | 20.82 | 314 | -- | -- |
| 241.12 | 0.723 | 8.39 | 3.34 | 1.09 | -0.349 | -0.64 | -- | 1.05 | 3.5 | 20.2 | 128 | -- | -- |
| 219.1 | 0.689 | 8.46 | 2.78 | 1.08 | -0.467 | -- | -2.7 | 0.939 | 3.35 | 20.78 | 371 | -- | -- |
| 242.39 | 0.725 | 8.39 | 3.36 | 1.09 | -0.351 | -- | -- | 1.07 | 3.57 | 20.1 | 114 | -- | -- |
| 281.51 | 0.781 | 8.44 | 2.96 | -- | -0.726 | -- | -2.53 | 1.04 | -- | 20.75 | 260 | -- | -- |
| 245.37 | 0.734 | 8.41 | 3.25 | 1.15 | -- | -0.641 | -- | 0.998 | 3.42 | -- | -- | -- | -- |
| 246.64 | 0.735 | 8.41 | 3.26 | 1.15 | -- | -- | -- | 1 | 3.48 | -- | -- | -- | -- |
| 288.29 | 0.791 | 8.42 | 3.5 | -- | -0.664 | -- | -- | 1.17 | -- | 26.39 | 202 | -- | -- |
| 506.87 | 1.05 | 8.55 | -- | 1.3 | 0.517 | -- | -- | 0.339 | 3.23 | 24.52 | 19 | -- | -- |
| 320.95 | 0.837 | 8.41 | 3.31 | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
| 527.19 | 1.07 | 8.49 | -- | 1.22 | -- | -- | -- | 0.638 | 3.47 | -- | -- | -- | -- |
| 598.17 | 1.14 | 8.48 | -- | -- | -0.454 | -- | -- | 0.701 | -- | 28.44 | 209 | -- | -- |
| 610.16 | 1.15 | 8.49 | -- | -- | -- | -- | -- | 0.665 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 208.14 | temperature | 25 | 720 | < th | dose independent | rect. | 19 | 6 |
| 3 | 208.85 | temperature | 25 | 720 | < th | dose independent | rect. | 21 | 3 |
| 6 | 209.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 3 |
| 8 | 210.19 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 9 |
| 9 | 210.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 12 | 210.80 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 10 |
| 13 | 211.01 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 2 |
| 14 | 211.08 | temperature | 25 | 720 | > th | dose independent | rect. | 19 | 4 |
| 15 | 211.18 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 21 | 211.39 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 26 | 211.66 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 10 |
| 36 | 212.04 | temperature | 20 | 270 | > th | dose independent | rect. | 7 | 22 |
| 63 | 212.99 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 11 |
| 64 | 213.04 | temperature | 20 | 30 | > th | dose independent | rect. | 10 | 20 |
| 74 | 213.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 104 | 213.89 | temperature | 25 | 270 | < th | dose dependent | sin | 10 | NA |
| 114 | 214.06 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 146 | 214.75 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 1 |
| 155 | 214.91 | temperature | 20 | 270 | > th | dose dependent | sin | 11 | NA |
| 169 | 215.15 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 12 |
| 232 | 216.09 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 23 |
| 265 | 216.51 | temperature | 20 | 270 | < th | dose independent | rect. | 9 | 23 |
| 266 | 216.54 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 22 |
| 276 | 216.68 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 323 | 217.18 | temperature | 20 | 270 | < th | dose independent | rect. | 5 | 23 |
| 324 | 217.19 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 345 | 217.32 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 349 | 217.34 | temperature | 20 | 270 | < th | dose independent | rect. | 13 | 23 |
| 351 | 217.36 | temperature | 20 | 270 | > th | dose independent | sin | 11 | NA |
| 368 | 217.47 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 19 |
| 373 | 217.50 | radiation | 10 | 90 | < th | dose independent | rect. | 6 | 14 |
| 395 | 217.62 | temperature | 20 | 270 | < th | dose independent | rect. | 1 | 23 |
| 469 | 218.08 | radiation | 10 | 90 | < th | dose independent | sin | 22 | NA |
| 474 | 218.13 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 14 |
| 481 | 218.18 | temperature | 20 | 270 | < th | dose independent | sin | 11 | NA |
| 515 | 218.40 | temperature | 20 | 270 | < th | dose independent | rect. | 20 | 12 |
| 575 | 218.74 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 19 |
| 625 | 218.99 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 719 | 219.48 | temperature | 20 | 10 | < th | dose independent | rect. | 22 | 21 |
| 746 | 219.60 | temperature | 20 | 270 | > th | dose independent | rect. | 24 | 23 |
| 807 | 219.89 | temperature | 25 | 10 | > th | dose independent | rect. | 18 | 14 |
| 871 | 220.15 | temperature | 20 | 90 | < th | dose independent | rect. | 23 | 12 |
| 899 | 220.27 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 901 | 220.28 | radiation | 20 | 270 | < th | dose independent | rect. | 10 | 9 |
| 982 | 220.65 | radiation | 20 | 90 | < th | dose dependent | sin | 22 | NA |
| 1000 | 220.71 | temperature | 25 | 270 | < th | dose dependent | rect. | 20 | 19 |