Os12g0168100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2 domain containing protein RAP2.6 (Fragment).
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Os12g0168100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AP2 domain containing protein RAP2.6 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 457.8 | 1.01 | 5.33 | -0.685 | 1.08 | 2.76 | -0.804 | 1.28 | 0.109 | 21.1 | 5.656 | 1122 | -- | -- |
| 457.25 | 0.996 | 5.32 | -0.711 | 1.05 | 2.68 | -0.672 | -- | 0.115 | 21 | 5.602 | 1042 | -- | -- |
| 457.71 | 0.996 | 5.34 | -0.651 | 1.02 | 2.88 | -- | 1.45 | 0.0987 | 21.3 | 5.702 | 1042 | -- | -- |
| 458.34 | 0.997 | 5.31 | -0.676 | 1.03 | 2.62 | -- | -- | 0.123 | 21.3 | 5.602 | 1042 | -- | -- |
| 493.78 | 1.03 | 5.3 | -0.516 | -- | 3.35 | -- | 1.42 | 0.0953 | -- | 5.2 | 733 | -- | -- |
| 530.02 | 1.08 | 5.34 | -1.35 | 1.33 | -- | -0.949 | -- | 0.0395 | 21.8 | -- | -- | -- | -- |
| 533.33 | 1.08 | 5.34 | -1.32 | 1.33 | -- | -- | -- | 0.0399 | 21.9 | -- | -- | -- | -- |
| 493.93 | 1.04 | 5.28 | -0.598 | -- | 3.09 | -- | -- | 0.111 | -- | 5.3 | 750 | -- | -- |
| 469.65 | 1.01 | 5.29 | -- | 0.966 | 2.96 | -- | -- | 0.196 | 21.1 | 5.604 | 1022 | -- | -- |
| 639.53 | 1.18 | 5.3 | -1.3 | -- | -- | -- | -- | 0.04 | -- | -- | -- | -- | -- |
| 578.98 | 1.13 | 5.3 | -- | 1.33 | -- | -- | -- | 0.187 | 21.8 | -- | -- | -- | -- |
| 500.71 | 1.04 | 5.28 | -- | -- | 3.21 | -- | -- | 0.187 | -- | 5.1 | 763 | -- | -- |
| 684.18 | 1.22 | 5.27 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 452.12 | wind | 5 | 1440 | > th | dose dependent | rect. | 22 | 18 |
| 11 | 454.76 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 10 |
| 17 | 455.76 | wind | 5 | 1440 | > th | dose dependent | sin | 3 | NA |
| 41 | 457.85 | wind | 5 | 1440 | > th | dose independent | rect. | 22 | 18 |
| 51 | 458.51 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 68 | 459.27 | wind | 5 | 1440 | > th | dose independent | sin | 3 | NA |
| 70 | 459.30 | wind | 5 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 72 | 459.38 | wind | 5 | 1440 | > th | dose independent | rect. | 7 | 7 |
| 76 | 459.48 | wind | 7 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 114 | 460.42 | wind | 5 | 1440 | < th | dose independent | rect. | 7 | 7 |
| 127 | 460.89 | wind | 5 | 1440 | < th | dose independent | sin | 3 | NA |
| 155 | 461.41 | radiation | 1 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 217 | 462.30 | wind | 5 | 1440 | > th | dose dependent | rect. | 6 | 21 |
| 230 | 462.39 | wind | 5 | 1440 | > th | dose dependent | rect. | 4 | 21 |
| 257 | 462.61 | wind | 5 | 1440 | > th | dose dependent | no | NA | NA |
| 259 | 462.64 | wind | 5 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 265 | 462.70 | wind | 5 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 358 | 463.74 | wind | 5 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 573 | 465.94 | wind | 7 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 576 | 465.98 | wind | 9 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 596 | 466.16 | wind | 5 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 605 | 466.23 | wind | 5 | 1440 | > th | dose independent | rect. | 7 | 20 |
| 635 | 466.46 | wind | 5 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 708 | 467.06 | wind | 7 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 712 | 467.09 | wind | 5 | 1440 | > th | dose independent | no | NA | NA |
| 728 | 467.17 | temperature | 15 | 14400 | > th | dose independent | rect. | 24 | 6 |
| 732 | 467.17 | wind | 7 | 1440 | < th | dose independent | rect. | 3 | 22 |
| 736 | 467.20 | wind | 5 | 720 | < th | dose independent | rect. | 12 | 23 |
| 745 | 467.26 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 23 |
| 757 | 467.32 | wind | 7 | 1440 | < th | dose independent | no | NA | NA |
| 765 | 467.34 | temperature | 15 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 767 | 467.34 | wind | 7 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 780 | 467.41 | wind | 7 | 1440 | < th | dose independent | rect. | 7 | 18 |
| 789 | 467.44 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 797 | 467.46 | wind | 7 | 720 | < th | dose independent | sin | 9 | NA |
| 821 | 467.56 | temperature | 15 | 14400 | < th | dose independent | rect. | 1 | 4 |
| 839 | 467.69 | temperature | 20 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 843 | 467.72 | temperature | 20 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 890 | 467.93 | temperature | 20 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 916 | 467.99 | temperature | 20 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 918 | 468.00 | temperature | 15 | 14400 | > th | dose independent | rect. | 20 | 10 |
| 990 | 468.21 | temperature | 15 | 14400 | > th | dose independent | rect. | 23 | 1 |