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Os05g0497300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ethylene response factor 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0294) R2 : 0.0476
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.295 (0.0619) R2dN8 : 0.0614 R2N8 : 0.0476
σ : 0.554
deviance : 140.75
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
121.2 0.517 11.6 0.331 0.496 1.6 0.067 0.421 0.353 6.77 5.5 538 -- --
121.23 0.513 11.6 0.333 0.497 1.57 0.0222 -- 0.361 6.68 5.6 537 -- --
121.2 0.513 11.6 0.334 0.49 1.61 -- 0.372 0.355 6.72 5.6 537 -- --
121.22 0.513 11.6 0.323 0.488 1.53 -- -- 0.356 6.72 5.6 537 -- --
130.6 0.532 11.6 0.268 -- 1.12 -- -1.44 0.385 -- 7.56 702 -- --
134.25 0.543 11.6 0.097 0.326 -- 0.48 -- 0.302 6.45 -- -- -- --
134.77 0.544 11.6 0.102 0.33 -- -- -- 0.3 6.11 -- -- -- --
130.78 0.533 11.6 0.268 -- 1.41 -- -- 0.377 -- 7.33 702 -- --
123.73 0.518 11.6 -- 0.465 1.36 -- -- 0.318 6.57 5.724 531 -- --
140.42 0.554 11.6 0.112 -- -- -- -- 0.308 -- -- -- -- --
135.05 0.544 11.6 -- 0.332 -- -- -- 0.289 6.1 -- -- -- --
132.48 0.536 11.6 -- -- 1.28 -- -- 0.336 -- 7.7 702 -- --
140.75 0.554 11.6 -- -- -- -- -- 0.295 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 117.04 radiation 10.0 720 < th dose independent rect. 13 7
9 118.17 radiation 10.0 720 < th dose independent rect. 13 15
31 119.25 temperature 30.0 90 < th dose dependent rect. 9 11
37 119.52 radiation 10.0 720 < th dose independent sin 16 NA
38 119.60 temperature 30.0 90 < th dose dependent rect. 11 9
45 119.95 wind 7.0 720 < th dose independent rect. 5 19
47 120.04 temperature 30.0 90 < th dose dependent rect. 7 13
49 120.09 radiation 10.0 720 < th dose independent rect. 14 1
50 120.11 wind 7.0 720 < th dose independent rect. 20 21
54 120.14 wind 7.0 270 > th dose dependent rect. 17 18
68 120.42 wind 7.0 270 > th dose independent rect. 17 18
69 120.43 radiation 10.0 720 < th dose independent rect. 16 1
75 120.53 wind 7.0 720 < th dose independent rect. 3 14
99 120.85 radiation 10.0 720 < th dose dependent rect. 8 11
106 120.92 wind 7.0 270 > th dose dependent sin 10 NA
116 121.01 precipitation 0.1 4320 > th dose dependent rect. 14 4
118 121.05 wind 5.0 270 > th dose dependent rect. 16 21
119 121.07 precipitation 0.1 14400 > th dose dependent rect. 16 2
121 121.12 wind 9.0 270 > th dose independent sin 10 NA
130 121.16 wind 9.0 14400 > th dose dependent rect. 16 16
133 121.17 temperature 30.0 90 < th dose dependent rect. 17 3
139 121.19 wind 7.0 720 < th dose independent rect. 10 15
151 121.32 wind 9.0 14400 > th dose dependent rect. 17 1
155 121.33 wind 5.0 720 > th dose dependent rect. 8 10
156 121.34 wind 5.0 720 > th dose dependent rect. 8 12
163 121.39 wind 9.0 270 < th dose independent sin 10 NA
169 121.42 radiation 10.0 720 < th dose dependent rect. 8 20
193 121.53 temperature 25.0 90 < th dose independent rect. 11 9
198 121.55 wind 9.0 14400 > th dose independent rect. 17 15
200 121.55 wind 5.0 720 > th dose dependent sin 0 NA
208 121.58 wind 9.0 14400 < th dose independent rect. 17 14
226 121.65 wind 9.0 14400 < th dose independent rect. 17 12
227 121.65 temperature 30.0 90 < th dose dependent rect. 1 19
251 121.71 wind 9.0 14400 > th dose dependent rect. 16 6
309 121.85 wind 7.0 720 < th dose independent rect. 5 11
310 121.85 radiation 20.0 720 < th dose dependent rect. 12 8
344 121.96 temperature 25.0 30 < th dose independent rect. 16 5
356 122.02 wind 9.0 14400 > th dose independent rect. 17 1
367 122.04 radiation 1.0 720 > th dose dependent rect. 12 21
370 122.05 wind 9.0 14400 > th dose dependent sin 11 NA
382 122.08 wind 7.0 720 < th dose independent rect. 9 23
399 122.13 radiation 20.0 720 < th dose dependent rect. 14 6
400 122.13 precipitation 0.1 4320 > th dose dependent rect. 9 9
403 122.14 atmosphere 995.0 14400 > th dose independent rect. 18 3
409 122.15 atmosphere 995.0 14400 < th dose independent rect. 18 1
412 122.15 wind 7.0 720 > th dose independent rect. 8 14
414 122.15 atmosphere 995.0 14400 < th dose dependent rect. 18 1
423 122.17 precipitation 0.1 4320 > th dose independent rect. 17 1
424 122.17 precipitation 0.1 4320 < th dose independent rect. 17 1
430 122.17 precipitation 0.1 4320 < th dose dependent rect. 17 1
441 122.19 temperature 30.0 270 < th dose dependent rect. 23 21
444 122.20 temperature 25.0 10 < th dose independent rect. 8 13
453 122.22 radiation 1.0 720 > th dose dependent rect. 12 19
457 122.23 wind 9.0 14400 < th dose independent rect. 17 6
464 122.24 wind 9.0 14400 > th dose independent rect. 16 6
507 122.29 radiation 10.0 720 > th dose independent rect. 12 21
523 122.31 wind 9.0 14400 < th dose independent rect. 17 2
524 122.31 wind 7.0 720 > th dose independent rect. 8 10
540 122.32 radiation 1.0 720 > th dose dependent rect. 12 7
553 122.33 precipitation 0.1 4320 > th dose independent rect. 14 4
594 122.36 radiation 20.0 720 < th dose dependent rect. 24 21
597 122.37 wind 7.0 720 > th dose independent rect. 19 23
630 122.41 wind 7.0 720 < th dose independent rect. 12 23
639 122.41 wind 7.0 720 > th dose dependent rect. 19 23
660 122.44 wind 5.0 720 > th dose dependent rect. 11 2
668 122.45 precipitation 0.1 4320 < th dose independent rect. 14 4
673 122.45 precipitation 0.1 4320 < th dose dependent rect. 14 4
705 122.48 wind 7.0 720 > th dose independent rect. 21 21
709 122.49 wind 7.0 720 > th dose independent sin 0 NA
730 122.52 atmosphere 1005.0 14400 < th dose independent rect. 8 3
742 122.53 wind 7.0 720 < th dose independent sin 0 NA
745 122.53 wind 7.0 720 < th dose independent rect. 10 7
804 122.59 wind 9.0 14400 > th dose independent sin 11 NA
805 122.59 atmosphere 995.0 14400 > th dose independent rect. 16 5
818 122.59 temperature 30.0 90 < th dose dependent rect. 1 22
853 122.63 wind 7.0 720 < th dose independent rect. 23 17
862 122.64 wind 9.0 14400 < th dose independent sin 11 NA
891 122.66 temperature 30.0 10 < th dose dependent rect. 18 2
941 122.71 humidity 70.0 90 > th dose independent rect. 18 2
952 122.72 atmosphere 1005.0 14400 > th dose independent rect. 8 3
956 122.72 radiation 20.0 720 < th dose independent rect. 24 23
957 122.72 wind 5.0 720 > th dose dependent no NA NA