Os03g0182800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene responsive element binding factor3 (OsERF3).
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Os03g0182800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene responsive element binding factor3 (OsERF3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 313.34 | 0.832 | 7.34 | 3.49 | 2.73 | -2.05 | -0.239 | 0.542 | 0.492 | 2.28 | 24.99 | 2901 | -- | -- |
| 313.46 | 0.825 | 7.34 | 3.36 | 2.68 | -2.1 | -0.323 | -- | 0.482 | 2.27 | 24.98 | 3019 | -- | -- |
| 313.49 | 0.825 | 7.34 | 3.51 | 2.72 | -2.07 | -- | 0.598 | 0.481 | 2.28 | 25.14 | 2921 | -- | -- |
| 313.57 | 0.825 | 7.36 | 3.35 | 2.7 | -2.06 | -- | -- | 0.444 | 2.28 | 25.09 | 2975 | -- | -- |
| 518.82 | 1.07 | 7.27 | 3.47 | -- | -3.79 | -- | 2.1 | 0.723 | -- | 24.7 | 1768 | -- | -- |
| 475.64 | 1.02 | 7.39 | 2.61 | 2.5 | -- | -0.537 | -- | 0.285 | 2.37 | -- | -- | -- | -- |
| 476.69 | 1.02 | 7.39 | 2.62 | 2.5 | -- | -- | -- | 0.289 | 2.35 | -- | -- | -- | -- |
| 520.16 | 1.07 | 7.3 | 3.23 | -- | -3.63 | -- | -- | 0.659 | -- | 24.66 | 1766 | -- | -- |
| 581 | 1.12 | 7.47 | -- | 2.73 | -1.34 | -- | -- | -0.0478 | 2.29 | 26.82 | 2675 | -- | -- |
| 845.63 | 1.36 | 7.37 | 2.73 | -- | -- | -- | -- | 0.35 | -- | -- | -- | -- | -- |
| 658.22 | 1.2 | 7.46 | -- | 2.55 | -- | -- | -- | -0.00363 | 2.37 | -- | -- | -- | -- |
| 789.35 | 1.31 | 7.39 | -- | -- | -3.17 | -- | -- | 0.269 | -- | 24.66 | 1766 | -- | -- |
| 1042.21 | 1.51 | 7.44 | -- | -- | -- | -- | -- | 0.0469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 278.36 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 3 |
| 3 | 278.70 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 3 |
| 32 | 281.79 | temperature | 25 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 55 | 284.24 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 3 |
| 63 | 284.89 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 80 | 285.52 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 83 | 285.54 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 86 | 285.70 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 106 | 286.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 129 | 287.01 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 148 | 287.43 | temperature | 25 | 14400 | > th | dose dependent | sin | 9 | NA |
| 309 | 291.32 | temperature | 25 | 14400 | < th | dose independent | sin | 11 | NA |
| 344 | 291.94 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 18 |
| 367 | 292.08 | temperature | 25 | 14400 | > th | dose independent | sin | 11 | NA |
| 392 | 292.20 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 565 | 294.36 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 624 | 294.84 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 22 |
| 633 | 294.97 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 643 | 295.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 19 |
| 690 | 295.61 | temperature | 30 | 14400 | > th | dose independent | rect. | 18 | 22 |
| 728 | 296.08 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 744 | 296.10 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 22 |
| 773 | 296.40 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 792 | 296.71 | temperature | 30 | 14400 | < th | dose independent | sin | 3 | NA |
| 870 | 297.37 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 22 |
| 877 | 297.48 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 18 |
| 926 | 297.53 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 955 | 297.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 23 |
| 994 | 297.76 | temperature | 30 | 14400 | > th | dose independent | sin | 2 | NA |