BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0838800 Os03g0838800|Os03g0838800
(385 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0838800 Zinc finger, C2H2-type domain containing protein 642 0.0
Os01g0871200 Zinc finger, C2H2-type domain containing protein 292 3e-79
Os12g0170400 Zinc finger, C2H2-type domain containing protein 245 4e-65
Os08g0562300 Zinc finger, C2H2-type domain containing protein 213 2e-55
Os02g0572900 Zinc finger, C2H2-type domain containing protein 206 3e-53
Os04g0165200 Zinc finger, C2H2-type domain containing protein 198 5e-51
Os05g0444200 Similar to T6J4.5 protein (WIP6 protein) 106 4e-23
Os01g0859100 Similar to WIP1 protein (Fragment) 104 1e-22
Os09g0307400 103 1e-22
Os02g0518500 103 2e-22
Os09g0282300 Similar to WIP1 protein (Fragment) 100 2e-21
Os01g0195000 Zinc finger, C2H2-type domain containing protein 99 4e-21
Os01g0935000 Zinc finger, C2H2-type domain containing protein 97 2e-20
Os08g0554400 Zinc finger, C2H2-type domain containing protein 97 3e-20
Os02g0672100 Zinc finger, C2H2-type domain containing protein 95 8e-20
Os06g0612300 Similar to T6J4.5 protein (WIP6 protein) 94 1e-19
AK067268 94 1e-19
Os01g0242200 Zinc finger, C2H2-type domain containing protein 93 3e-19
Os10g0419200 Zinc finger, C2H2-type domain containing protein 93 3e-19
Os02g0196100 Similar to T6J4.5 protein (WIP6 protein) 92 4e-19
Os09g0555700 Zinc finger, C2H2-type domain containing protein 92 9e-19
Os04g0566400 Zinc finger, C2H2-type domain containing protein 91 1e-18
Os01g0572300 Zinc finger, C2H2-type domain containing protein 84 2e-16
Os03g0197700 Zinc finger, C2H2-type domain containing protein 79 7e-15
Os08g0504000 Similar to WIP5 protein 74 2e-13
Os09g0485600 Similar to WIP1 protein (Fragment) 73 3e-13
>Os03g0838800 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/385 (82%), Positives = 318/385 (82%)
Query: 1 MMMSSSADHFSNNNNNQAMYLEQDEDFSQMIMELCDFDASSTTQXXXXXXXXXXXXXXXX 60
MMMSSSADHFSNNNNNQAMYLEQDEDFSQMIMELCDFDASSTTQ
Sbjct: 1 MMMSSSADHFSNNNNNQAMYLEQDEDFSQMIMELCDFDASSTTQARHGGEAAAAAAGNAR 60
Query: 61 XVLTYLTFLEQKIGHLRGIISSTPNPPPQIVAAELSCIVVQLVSISKNLXXXXXXXXXXX 120
VLTYLTFLEQKIGHLRGIISSTPNPPPQIVAAELSCIVVQLVSISKNL
Sbjct: 61 AVLTYLTFLEQKIGHLRGIISSTPNPPPQIVAAELSCIVVQLVSISKNLAAARRGGDDAD 120
Query: 121 XXXXXXXXXXXXXXXXXXXXRAPPRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLR 180
RAPPRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLR
Sbjct: 121 ADAKHDGSSDADEGADGDGERAPPRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLR 180
Query: 181 MHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKT 240
MHMRGHGEEYKSAAALAK FYSCPYVGCKRNREHKSFQPLKT
Sbjct: 181 MHMRGHGEEYKSAAALAKPGGSPSRSPAAADAAARRRFYSCPYVGCKRNREHKSFQPLKT 240
Query: 241 PTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLF 300
PTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLF
Sbjct: 241 PTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLF 300
Query: 301 AHVAIFDGHSPALPPEDYDDDAASGQLPHAAGEAVGRTVDTNRFFSDGLMIKGSMEDERG 360
AHVAIFDGHSPALPPEDYDDDAASGQLPHAAGEAVGRTVDTNRFFSDGLMIKGSMEDERG
Sbjct: 301 AHVAIFDGHSPALPPEDYDDDAASGQLPHAAGEAVGRTVDTNRFFSDGLMIKGSMEDERG 360
Query: 361 SLSPMGLDYCEFDGIDLFAAAAFDF 385
SLSPMGLDYCEFDGIDLFAAAAFDF
Sbjct: 361 SLSPMGLDYCEFDGIDLFAAAAFDF 385
>Os01g0871200 Zinc finger, C2H2-type domain containing protein
Length = 522
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/248 (58%), Positives = 170/248 (68%), Gaps = 15/248 (6%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P GSY V+Q+EKEEILAPH HFC +CGKGFKRDANLRMHMRGHG+EYK+AAALAK
Sbjct: 262 PPGSYVVLQLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKPSKDS 321
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
YSCPYVGCKRN+EHK FQPLKT CVKNHY+RSHCDKS+TC RCN
Sbjct: 322 SLESAPVTR------YSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCN 375
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGHSPALPPEDYDDDAA 323
K+FSV+ADL+THEKHCGRD+W+CSCGT+FSRKDKLF HVA+F GH+PALP +D A
Sbjct: 376 TKKFSVIADLKTHEKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMDDIKVTGA 435
Query: 324 SGQLPHAAGEAVGRTVDTNRFFSDGLM------IKGSMEDERGSLSPMGLDYCEFDGIDL 377
S Q P + EA+ V + + G + M D+ SP+ D C F G+D
Sbjct: 436 SEQ-PQGS-EAMNTMVGSAGYNFPGSSSDDIPNLDMKMADDPRYFSPLSFDPC-FGGLDD 492
Query: 378 FAAAAFDF 385
F FD
Sbjct: 493 FTRPGFDI 500
>Os12g0170400 Zinc finger, C2H2-type domain containing protein
Length = 465
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 131/164 (79%), Gaps = 3/164 (1%)
Query: 150 VVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXXX 209
V+Q+E++EILAPH HFCG+CGKGFKRDANLRMHMRGHG+EYKSAAALAK
Sbjct: 215 VLQLEEDEILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQP 274
Query: 210 XXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSV 269
YSCP+ GCKRNR H SFQPLKT CVKNHY+RSHC+K C RC KRFSV
Sbjct: 275 PQPERR---YSCPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSV 331
Query: 270 VADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGHSPAL 313
+ADL+THEKHCGRDRW+CSCGTSFSRKDKLFAHVA+F GH+PAL
Sbjct: 332 MADLKTHEKHCGRDRWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375
>Os08g0562300 Zinc finger, C2H2-type domain containing protein
Length = 385
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 114/165 (69%), Gaps = 1/165 (0%)
Query: 150 VVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXXX 209
+++++ E+LA + H+C VCGKGFKRDANLRMHMR HG+EYKS AAL+
Sbjct: 190 IIELDAAELLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKSKAALSNPTKLLAKGGDE 249
Query: 210 XXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSV 269
YSCP GC+ NR H FQPLK+ C KNHY+RSHC K + C RC K FSV
Sbjct: 250 TMAAAARK-YSCPQEGCRWNRRHAKFQPLKSVICAKNHYKRSHCPKMYVCNRCGRKHFSV 308
Query: 270 VADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGHSPALP 314
++DLRTHEKHCG RW+CSCGTSFSRKDKL HV++F GH P +P
Sbjct: 309 LSDLRTHEKHCGDHRWLCSCGTSFSRKDKLIGHVSLFAGHQPVMP 353
>Os02g0572900 Zinc finger, C2H2-type domain containing protein
Length = 384
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 137/221 (61%), Gaps = 20/221 (9%)
Query: 146 GSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXX 205
G Y+VV+++ E+LA HVHFC +CGKGF+RDANLRMHMR HG+ +K+ AL++
Sbjct: 155 GDYDVVELDASELLAEHVHFCDICGKGFRRDANLRMHMRAHGDRFKTLDALSRPGQPKPP 214
Query: 206 XXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRC-NV 264
+SCPY GC RNR H+ F+PLK+ C +NH+RRSHC K + C RC
Sbjct: 215 AGREVR-------FSCPYAGCNRNRAHRRFRPLKSAVCARNHFRRSHCPKLYACERCGGK 267
Query: 265 KRFSVVADLRTHEKHCGRD-RWVCSCGTSFSRKDKLFAHVAIFDGHSPALPPEDYDDDAA 323
KRF+V+ADLR+H +HCG + +W CSCGT+FSRKDKLF H+A+F+GH+PA+ + A
Sbjct: 268 KRFAVLADLRSHLRHCGEEAQWRCSCGTTFSRKDKLFGHLALFEGHTPAIAEPNKGVATA 327
Query: 324 SGQLPHAAGEAVGRTVDTNRFFSDGLMIKGSMEDERGSLSP 364
+ + + E G + +R EDE G P
Sbjct: 328 AAEASISMMEEGGVEANCDR-----------EEDEEGGFDP 357
>Os04g0165200 Zinc finger, C2H2-type domain containing protein
Length = 371
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 115/170 (67%), Gaps = 9/170 (5%)
Query: 149 EVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXX 208
+VV++E +LA + H+C VCGKGFKRDANLRMHMR HG+EYK+AAAL
Sbjct: 188 DVVELEASYLLARYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTAAALTSTGAGMRAAAR 247
Query: 209 XXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFS 268
YSCP GC+ NR H FQ LK+ C KNHYRRSHC K + C RC K+F+
Sbjct: 248 RCS-------YSCPAEGCRWNRRHPRFQALKSVVCAKNHYRRSHCPKMYVCGRCGGKQFA 300
Query: 269 VVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIF-DGHSPA-LPPE 316
V++DLRTHEKHCG RW+CSCGT FSRKDKL HVA+F GH+P + PE
Sbjct: 301 VLSDLRTHEKHCGELRWLCSCGTFFSRKDKLMGHVALFAAGHAPVPVAPE 350
>Os05g0444200 Similar to T6J4.5 protein (WIP6 protein)
Length = 389
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 78/164 (47%), Gaps = 8/164 (4%)
Query: 145 RGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXX 204
RG + + ++ P C VC K F R N++MHM GHG EY+ K
Sbjct: 192 RGRRYWIPTPAQILIGPVQFVCHVCNKAFNRYNNMQMHMWGHGREYRKGPESLKGTQATA 251
Query: 205 XXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNV 264
Y C GC+ N H +PLK ++ HY+R H K F CRRC
Sbjct: 252 TLAMLKLPC-----YCC-AAGCRNNVGHPRARPLKDFRTLQTHYKRKHGAKPFACRRC-A 304
Query: 265 KRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDG 308
K F+V D RTHEK+CG+ RW C+CG+ F K L HV F G
Sbjct: 305 KPFAVKGDWRTHEKNCGK-RWFCACGSDFKHKRSLNDHVRSFGG 347
>Os01g0859100 Similar to WIP1 protein (Fragment)
Length = 376
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 157 EILAPHVHF-CGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXX 215
+IL V F C VC K F R N++MHM GHG EY+ K
Sbjct: 208 QILVGPVQFICHVCNKTFNRYNNMQMHMWGHGREYRKGPESLKGTQTLAMLKLPC----- 262
Query: 216 XXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRT 275
Y C GCK N H +PLK ++ HY+R H K F CRRC K F+V D RT
Sbjct: 263 ---YCC-AAGCKNNVAHPRARPLKDFRTLQTHYKRKHGAKPFRCRRC-AKPFAVKGDWRT 317
Query: 276 HEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGH 309
HEK+CG+ RW C+CG+ F K L HV F H
Sbjct: 318 HEKNCGK-RWFCACGSDFKHKRSLNDHVRSFGAH 350
>Os09g0307400
Length = 385
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 157 EILAPHVHF-CGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXX 215
EIL F C VC K F R N++MHM GHG +Y+ + +
Sbjct: 180 EILVGSTQFSCAVCNKTFNRFNNMQMHMWGHGSQYRKGSESLRGAITVGGAAPPASLMRL 239
Query: 216 XXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRT 275
+ C GC+ N EH +PLK ++ HYRR H + + CRRC KRF+V D RT
Sbjct: 240 PCY--CCAEGCRNNVEHPRARPLKDFRTLQTHYRRKHGARPYACRRCG-KRFAVRGDWRT 296
Query: 276 HEKHCGRDRWVCSCGTSFSRKDKLFAHVAIF-DGHSPAL 313
HEK+CG+ W C CG+ F K L HV F GH+P +
Sbjct: 297 HEKNCGK-LWFCVCGSDFKHKRSLKDHVRSFGGGHAPHI 334
>Os02g0518500
Length = 492
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EVV + + +LA + + C VC KGF+RD NL++H RGH +K
Sbjct: 46 PDPDVEVVALSPKTLLATNRYICEVCHKGFQRDQNLQLHRRGHNLPWK------------ 93
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP + C H + + L T +K HY R H +K + C RC+
Sbjct: 94 --LKQRSSTEAKKKVYVCPEITCP---HHDATRALGDLTGIKKHYSRKHGEKKWKCDRCS 148
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDG 308
K+++V +D + H K CG + C CGT FSRKD H A D
Sbjct: 149 -KKYAVQSDWKAHTKICGTKEYRCDCGTIFSRKDSFITHRAFCDA 192
>Os09g0282300 Similar to WIP1 protein (Fragment)
Length = 306
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 79/163 (48%), Gaps = 14/163 (8%)
Query: 145 RGSYEVVQIEKEEILAPHVHF-CGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
+G Y + +IL HF C VC K F R NL+MHM GHG +Y+ +
Sbjct: 137 KGKYWIP--TPTQILIGPTHFACPVCCKTFSRYNNLQMHMWGHGSQYRRGPESLRGTQPA 194
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
C GC+ N +H +PLK ++ HY+R HC K F CR+C
Sbjct: 195 AMLRLPCF---------CCAAGCRNNVDHPRARPLKDFRTLQTHYKRKHCAKPFACRKCG 245
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIF 306
K +V D RTHEK+CGR RW C+CG+ F K L H+ F
Sbjct: 246 -KPLAVRGDWRTHEKNCGR-RWHCACGSDFKHKRSLKDHIRAF 286
>Os01g0195000 Zinc finger, C2H2-type domain containing protein
Length = 487
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 86/198 (43%), Gaps = 17/198 (8%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EV+ + ++A + + C +CGKGF+RD NL++H RGH +K
Sbjct: 54 PDPEAEVIALSPRTLMATNRYVCEICGKGFQRDQNLQLHRRGHNLPWK------------ 101
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP GC H + L T +K H+ R H +K + C +C+
Sbjct: 102 -LKQRNPKEVVRKKVYVCPEAGCV---HHDPARALGDLTGIKKHFSRKHGEKKWKCDKCS 157
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDGHSPALPPEDYDDDAA 323
KR++V +D + H K CG + C CGT FSR+D H A D + A
Sbjct: 158 -KRYAVHSDWKAHSKVCGTREYRCDCGTLFSRRDSFITHRAFCDALAEESARAVTAAAAV 216
Query: 324 SGQLPHAAGEAVGRTVDT 341
+GQ H G + D
Sbjct: 217 AGQQQHGGGMLFSQVADV 234
>Os01g0935000 Zinc finger, C2H2-type domain containing protein
Length = 476
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 87/209 (41%), Gaps = 34/209 (16%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P S EVV + +LA + C +CGKGF+RD NL++H RGH + K
Sbjct: 61 PDPSAEVVALSPRTLLATNRFVCEICGKGFQRDQNLQLHRRGHNLPW-------KLRQRG 113
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP C + ++ L T +K H+ R H +K + C RC
Sbjct: 114 GAGGGGGGEPPRKRVYVCPEASCVHHSPSRALGDL---TGIKKHFCRKHGEKKWKCDRCG 170
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD---------------- 307
KR++V +D + H K CG + C CGT FSR+D H A D
Sbjct: 171 -KRYAVHSDWKAHSKVCGTREYKCDCGTVFSRRDSFVTHRAFCDALAQENNKLAQPMNMA 229
Query: 308 -------GHSPALPPEDYDDDAASGQLPH 329
G A P DDDAA + PH
Sbjct: 230 AVTSALQGQQQAHHPVADDDDAAGVKSPH 258
>Os08g0554400 Zinc finger, C2H2-type domain containing protein
Length = 548
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EVV + +LA + C VC KGF+R+ NL++H RGH +K K
Sbjct: 50 PNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRR 109
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP C H + L T +K HY R H +K + C +CN
Sbjct: 110 --------------VYLCPEPSCV---HHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCN 152
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD 307
KR++V +D + H K CG + C CGT FSR+D H A D
Sbjct: 153 -KRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 195
>Os02g0672100 Zinc finger, C2H2-type domain containing protein
Length = 615
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 26/197 (13%)
Query: 141 RAPPRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXX 200
R P EV+ + + +LA + C VC KGF+R+ NL++H RGH +K
Sbjct: 72 RTLPDPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK--------- 122
Query: 201 XXXXXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCR 260
Y CP C H + L T +K H+ R H +K + C
Sbjct: 123 ----LKQKNPLQAQRRRVYLCPEPTCV---HHDPSRALGDLTGIKKHFCRKHGEKKWKCD 175
Query: 261 RCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDG---HSPALPPED 317
+C+ KR++V +D + H K CG + C CGT FSR+D H A D S LPP
Sbjct: 176 KCS-KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPP-- 232
Query: 318 YDDDAASGQLPHAAGEA 334
AA+G L +AG A
Sbjct: 233 ----AAAGHLYGSAGAA 245
>Os06g0612300 Similar to T6J4.5 protein (WIP6 protein)
Length = 445
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 80/167 (47%), Gaps = 13/167 (7%)
Query: 145 RGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXX 204
+G Y + + ++ P C VC K F R N++MHM GHG +Y+ +
Sbjct: 260 KGQY-WIPTPSQILIGPTQFSCPVCYKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTA 318
Query: 205 XXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNV 264
C GC+ N +H +PLK ++ HY+R H K F CR+C
Sbjct: 319 MLRLPCY---------CCAAGCRNNIDHPRARPLKDFRTLQTHYKRKHGIKPFMCRKCG- 368
Query: 265 KRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD-GHS 310
K F+V D RTHEK+CG+ W C+CG+ F K L H+ F GH+
Sbjct: 369 KAFAVRGDWRTHEKNCGK-LWYCACGSDFKHKRSLKDHIRAFGRGHA 414
>AK067268
Length = 324
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EVV + +LA + C VC KGF+R+ NL++H RGH +K K
Sbjct: 50 PNPDAEVVALSPHTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKETRRR 109
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP C H + L T +K HY R H +K + C +CN
Sbjct: 110 --------------VYLCPEPSCV---HHDPSRALGNLTGIKKHYSRKHGEKKWKCDKCN 152
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD 307
KR++V +D + H K CG + C CGT FSR+D H A D
Sbjct: 153 -KRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 195
>Os01g0242200 Zinc finger, C2H2-type domain containing protein
Length = 415
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 18/164 (10%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EV+ + ++A + C +CGKGF+RD NL++H RGH +K K
Sbjct: 41 PDPEAEVIALSPRTLMATNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGK----- 95
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP C + ++ L T +K H+ R H +K + C +C+
Sbjct: 96 ---------EPRKRVYVCPEKSCVHHNPSRALGDL---TGIKKHFCRKHGEKKWKCDKCS 143
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD 307
KR++V +D + H K CG + C CGT FSR+D H A D
Sbjct: 144 -KRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 186
>Os10g0419200 Zinc finger, C2H2-type domain containing protein
Length = 409
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EV+ + ++A + C VC KGF+RD NL++H RGH +K +
Sbjct: 19 PDPEAEVIALSPRALVATNRFVCEVCNKGFQRDQNLQLHRRGHNLPWK-----LRHRAAA 73
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP C H + L T +K H+ R H +K + C RC
Sbjct: 74 VSAVTTAAPAPRKRVYVCPEPTCV---HHDPARALGDLTGIKKHFSRKHGEKRWRCERCG 130
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDG 308
KR++V +D + H K+CG + C CG FSRKD L H A D
Sbjct: 131 -KRYAVHSDWKAHVKNCGTREYRCDCGILFSRKDSLLTHRAFCDA 174
>Os02g0196100 Similar to T6J4.5 protein (WIP6 protein)
Length = 220
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 157 EILAPHVHF-CGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXX 215
+ILA F C VC K F R NL+MHM GHG +Y+ A
Sbjct: 52 QILAGATQFSCPVCRKTFNRYNNLQMHMWGHGSQYRRGGTAA-------LRGAQPTAMLR 104
Query: 216 XXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRT 275
Y C GC+ + +H +PLK ++ HYRR H + F CRRC KRF+V D RT
Sbjct: 105 LPCYCCA-AGCRNHIDHPRARPLKDFRTLQTHYRRRHGARDFACRRC-AKRFAVRGDWRT 162
Query: 276 HEKHCGRDRWVCSCGTSFSRKDKL 299
HEK+CGR W C+CG F K L
Sbjct: 163 HEKNCGRL-WRCACGAHFRHKRSL 185
>Os09g0555700 Zinc finger, C2H2-type domain containing protein
Length = 535
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 144 PRGSYEVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXX 203
P EV+ + ++A + C VC KGF+R+ NL++H RGH +K K
Sbjct: 56 PNPDAEVIALSPRTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPKEARRR 115
Query: 204 XXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCN 263
Y CP C H + L T +K HY R H +K + C +C+
Sbjct: 116 --------------VYLCPEPSCV---HHDPSRALGDLTGIKKHYCRKHGEKKWRCDKCS 158
Query: 264 VKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFD 307
KR++V +D + H K CG + C CGT FSR+D H A D
Sbjct: 159 -KRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCD 201
>Os04g0566400 Zinc finger, C2H2-type domain containing protein
Length = 405
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 149 EVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXX 208
EV+ + + +LA + C VC KGF+R+ NL++H RGH +K
Sbjct: 82 EVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHNLPWK-------------LKQK 128
Query: 209 XXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFS 268
Y CP C H + L T +K H+ R H +K + C +C+ KR++
Sbjct: 129 NPAQAQRRRVYLCPEPTCV---HHDPARALGDLTGIKKHFCRKHGEKKWKCDKCS-KRYA 184
Query: 269 VVADLRTHEKHCGRDRWVCSCGTSFSRKDKLFAHVAIFDG---HSPALPP 315
V +D + H K CG + C CGT FSR+D H A D S LPP
Sbjct: 185 VQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESSRLPP 234
>Os01g0572300 Zinc finger, C2H2-type domain containing protein
Length = 449
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 17/142 (11%)
Query: 166 CGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXXXXFYSCPYVG 225
C +CGKGF+RD NL++H RGH +K +K Y CP
Sbjct: 8 CEICGKGFQRDQNLQLHRRGHNLPWKLKQRGSKEAVRKK-------------VYICPEAS 54
Query: 226 CKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRW 285
C H + L T +K H+ R H +K + C +C+ K+++V +D + H K CG +
Sbjct: 55 CV---HHDPSRALGDLTGIKKHFFRKHGEKKWKCDKCS-KKYAVHSDWKAHSKICGTREY 110
Query: 286 VCSCGTSFSRKDKLFAHVAIFD 307
C CGT FSR+D H A D
Sbjct: 111 KCDCGTIFSRRDSFITHRAFCD 132
>Os03g0197700 Zinc finger, C2H2-type domain containing protein
Length = 168
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 70/147 (47%), Gaps = 18/147 (12%)
Query: 149 EVVQIEKEEILAPHVHFCGVCGKGFKRDANLRMHMRGHGEEYKSAAALAKXXXXXXXXXX 208
EV+ + + +LA + C +C KGF+RD NL++H RGH +K K
Sbjct: 27 EVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRSGK---------- 76
Query: 209 XXXXXXXXXFYSCPYVGCKRNREHKSFQPLKTPTCVKNHYRRSHCDKSFTCRRCNVKRFS 268
Y CP C H + L T +K H+ R H +K + C +C+ K+++
Sbjct: 77 ----EVRKRVYVCPEPTCV---HHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCS-KKYA 128
Query: 269 VVADLRTHEKHCGRDRWVCSCGTSFSR 295
V +D + H K CG + C CGT FSR
Sbjct: 129 VQSDWKAHTKTCGSREYRCDCGTLFSR 155
>Os08g0504000 Similar to WIP5 protein
Length = 156
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 179 LRMHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPL 238
++MHM GHG +Y+ + C GC+ N +H +PL
Sbjct: 1 MQMHMWGHGSQYRKGPESLRGVQPTAMLRLPCY---------CCAAGCRNNIDHPRARPL 51
Query: 239 KTPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDK 298
K ++ HY+R H K F CR+C K F+V D RTHEK+CG+ W C CG+ F K
Sbjct: 52 KDFRTLQTHYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGKL-WYCLCGSEFKHKRS 109
Query: 299 LFAHVAIFDGH 309
L H F GH
Sbjct: 110 LKDHARAF-GH 119
>Os09g0485600 Similar to WIP1 protein (Fragment)
Length = 154
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 180 RMHMRGHGEEYKSAAALAKXXXXXXXXXXXXXXXXXXXFYSCPYVGCKRNREHKSFQPLK 239
+MHM GHG +Y+ + C GC+ N +H +PLK
Sbjct: 1 QMHMWGHGSQYRKGPESLRGIQPTAMLRLPCY---------CCAAGCRNNIDHPRAKPLK 51
Query: 240 TPTCVKNHYRRSHCDKSFTCRRCNVKRFSVVADLRTHEKHCGRDRWVCSCGTSFSRKDKL 299
++ HY+R H K F CR+C K F+V D RTHEK+CG+ W C CG+ F K L
Sbjct: 52 DFRTLQTHYKRKHGLKPFLCRKCG-KAFAVKGDWRTHEKNCGK-LWYCLCGSEFKHKRSL 109
Query: 300 FAHVAIF 306
H F
Sbjct: 110 KDHARAF 116
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.135 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,060,219
Number of extensions: 450844
Number of successful extensions: 1216
Number of sequences better than 1.0e-10: 27
Number of HSP's gapped: 1158
Number of HSP's successfully gapped: 27
Length of query: 385
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 282
Effective length of database: 11,657,759
Effective search space: 3287488038
Effective search space used: 3287488038
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)