BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0123100 Os03g0123100|AK062161
(160 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1 336 5e-93
Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1 320 3e-88
Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (... 159 1e-39
Os05g0182500 Rad6 (Ubiquitin carrier protein) 122 1e-28
Os07g0166800 Rad6 (Ubiquitin carrier protein) 121 2e-28
Os03g0791800 Rad6 (Ubiquitin carrier protein) 121 3e-28
Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b 100 7e-22
Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 100 8e-22
Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ub... 99 9e-22
Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a 99 9e-22
Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.... 97 3e-21
Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 ... 97 6e-21
Os05g0460200 Similar to Ubiquitin carrier protein 87 8e-18
Os01g0839700 Similar to Ubiquitin carrier protein 84 4e-17
Os01g0273100 Similar to Ubiquitin conjugating protein-like ... 82 2e-16
Os07g0577400 Similar to Constitutive photomorphogenesis pro... 81 3e-16
Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (... 80 6e-16
Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (E... 78 3e-15
Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2 78 3e-15
Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (... 77 4e-15
Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (... 73 1e-13
Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain contai... 72 2e-13
Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2 70 8e-13
D17786 65 2e-11
>Os03g0123100 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 336 bits (861), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFP 60
MSGGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFP
Sbjct: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFP 60
Query: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
Query: 121 LDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160
LDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV
Sbjct: 121 LDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160
>Os10g0536000 Similar to SUMO E2 conjugating enzyme SCE1
Length = 160
Score = 320 bits (820), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 149/160 (93%), Positives = 156/160 (97%)
Query: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFP 60
MSGGIARGRLAEERKAWRKNHPHGFVAKPET+ADG+ NLMIWHCTIPGKQGTDWEGGY+P
Sbjct: 1 MSGGIARGRLAEERKAWRKNHPHGFVAKPETMADGSANLMIWHCTIPGKQGTDWEGGYYP 60
Query: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL
Sbjct: 61 LTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDL 120
Query: 121 LDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160
LDQPNPADPAQTDGYH+FIQD EYKRRVR+QAKQYP ++
Sbjct: 121 LDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQYPALL 160
>Os04g0580400 Similar to Ubiquitin-conjugating enzyme E2 I (EC 6.3.2.19)
(Ubiquitin-protein ligase I) (Ubiquitin carrier protein
I) (SUMO-1-protein ligase) (SUMO- 1 conjugating enzyme)
(Ubiquitin carrier protein 9) (p18)
Length = 139
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 69/105 (65%), Positives = 83/105 (79%), Gaps = 2/105 (1%)
Query: 34 DGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTV 93
DG+VNLM+W C IPGK+GTDWEGGYFPLT+ F+EDYP+ P CKFP GFFH NVY SG V
Sbjct: 1 DGSVNLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAV 60
Query: 94 CLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLF 138
CLSIL+ + W+P+ITV+QIL+GIQ+L D PNP AQ Y L+
Sbjct: 61 CLSILS--TAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELY 103
>Os05g0182500 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHF 65
AR RL + K ++ P G P+ N+M+W+ I G T W+GG F LTL F
Sbjct: 5 ARKRLMRDFKRLMQDPPAGISGAPQD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
Query: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
Query: 126 PADPAQTDGYHLFIQDPTEYKRRVRLQAKQ 155
P PA ++ LF ++ EY R+VR +Q
Sbjct: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
>Os07g0166800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 121 bits (304), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHF 65
AR RL + K +++ P G P N+M+W+ I G T W+GG F LTL F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
Query: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 60 TEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
Query: 126 PADPAQTDGYHLFIQDPTEYKRRVRLQAKQ 155
P PA ++ LF ++ EY R+VR +Q
Sbjct: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
>Os03g0791800 Rad6 (Ubiquitin carrier protein)
Length = 152
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 7/150 (4%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHF 65
AR RL + K +++ P G P N+M+W+ I G T W+GG F LTL F
Sbjct: 5 ARKRLMRDFKRLQQDPPAGISGAPHD-----NNIMLWNAVIFGPDDTPWDGGTFKLTLQF 59
Query: 66 SEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPN 125
+EDYP+KPP +F FHPN+Y G++CL IL + W P V IL IQ LL PN
Sbjct: 60 TEDYPNKPPVVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPN 117
Query: 126 PADPAQTDGYHLFIQDPTEYKRRVRLQAKQ 155
P PA ++ LF ++ EY R+VR +Q
Sbjct: 118 PNSPANSEAARLFSENKREYNRKVREIVEQ 147
>Os02g0261100 Ubiquitin-conjugating enzyme OsUBC5b
Length = 148
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+A R+ +E K +K+ P A P +A+ ++ W T+ G + + GG F +T+H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP--VAE---DMFHWQATLMGPSDSPYAGGVFLVTIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK FHPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVALKTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
NP DP + H++ D +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 145
>Os01g0819400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+A R+ +E K +K+ P A P ++ W TI G + + GG F + +H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGP-----AGEDMFHWQATIMGPPDSPYAGGVFLVNIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
NP DP + H++ D +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRPKYETTARSWTQKY 145
>Os04g0667800 Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin carrier
protein)
Length = 148
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+A R+ +E K +K+ P A P ++ W TI G + + GG F + +H
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVG-----EDMFHWQATIMGPSDSPFAGGVFLVNIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
NP DP + H++ D +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 145
>Os01g0658400 Ubiquitin-conjugating enzyme OsUBC5a
Length = 147
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+A R+ +E K +K+ P A P ++ W TI G + + GG F +T+H
Sbjct: 1 MASKRIQKELKDLQKDPPTSCSAGPVG-----EDMFHWQATIMGPSDSPYAGGVFLVTIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G++CL IL + W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
NP DP + H++ D +Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMYKTDRHKYENTARTWTQRY 145
>Os09g0293400 Similar to Ubiquitin-conjugating enzyme (EC 6.3.2.19) (Ubiquitin
carrier protein)
Length = 148
Score = 97.4 bits (241), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+A R+ +E RK+ P A P +L W TI G + + GG F + +H
Sbjct: 1 MASKRIQKELMDLRKDPPTSCSAGP-----AGEDLFHWQATIMGPSDSPYAGGVFFVNIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F +HPN+ +G++CL IL E W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVNFQTKVYHPNINSNGSICLDILKEQ--WSPALTISKVLLSISSLLTDP 113
Query: 125 NPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
NP DP + H++ Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHVYKSQRPRYEETARAWTQKY 145
>Os02g0120600 Similar to Ubiquitin-conjugating enzyme E2-17 kDa 9 (EC 6.3.2.19)
(Ubiquitin- protein ligase 9) (Ubiquitin carrier protein
9) (UBCAT4B)
Length = 148
Score = 96.7 bits (239), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 81/152 (53%), Gaps = 7/152 (4%)
Query: 5 IARGRLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+A R+ +E K +++ P A P ++D ++ W TI G + + GG F +T+H
Sbjct: 1 MALRRIIKELKDLQRDPPTSCSAGP--VSD---DMFHWQATIMGPNDSPYSGGVFLVTIH 55
Query: 65 FSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQP 124
F DYP KPPK F FHPN+ +G +CL IL + W PA+T+ ++L+ I LL P
Sbjct: 56 FPPDYPFKPPKVAFKTKVFHPNINSNGNICLDILKDQ--WSPALTISKVLLSICSLLTDP 113
Query: 125 NPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
NP DP + H+ D Y+ R ++Y
Sbjct: 114 NPDDPLVPEIAHMCKTDRLRYESTARGWTQKY 145
>Os05g0460200 Similar to Ubiquitin carrier protein
Length = 169
Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 74/143 (51%), Gaps = 15/143 (10%)
Query: 19 KNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKF 78
KN GF A L D + N+ W TI G T ++GGYF + F ++YP+ PP +F
Sbjct: 21 KNPVDGFSAG---LVDDS-NVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPSVRF 76
Query: 79 PQGFFHPNVYPSGTVCLSILN---EDSG--------WRPAITVKQILVGIQDLLDQPNPA 127
+HPNVYP G VC+SIL+ ED W P TV+ I++ I +L PN
Sbjct: 77 TSEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSPNDE 136
Query: 128 DPAQTDGYHLFIQDPTEYKRRVR 150
PA + + + ++K++VR
Sbjct: 137 SPANIEAAKDWREKRDDFKKKVR 159
>Os01g0839700 Similar to Ubiquitin carrier protein
Length = 169
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 38 NLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
N+ W TI G T ++GGYF + F ++YP+ PP +F +HPNVYP G VC+SI
Sbjct: 36 NVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI 95
Query: 98 LN-----------EDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYK 146
L+ W P TV+ I++ I +L PN PA + + + ++K
Sbjct: 96 LHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGPNDESPANIEAAKEWREKRDDFK 155
Query: 147 RRVRLQAKQ 155
++VR ++
Sbjct: 156 KKVRRLVRK 164
>Os01g0273100 Similar to Ubiquitin conjugating protein-like
(Ubiquitin-conjugating enzyme) (Ubiquitinating enzyme)
Length = 191
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 9 RLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSED 68
RL E A G A PE N+ W TI G T +EG + L+L F +
Sbjct: 51 RLQSELMALMMGGDPGVSAFPEG-----DNIFSWVGTIAGSAATAYEGTSYRLSLAFPGE 105
Query: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPAD 128
YP KPPK +F FHPNV G +CL IL + W A V+ IL+ IQ LL +PN
Sbjct: 106 YPYKPPKVRFETPCFHPNVDAHGNICLDILQDK--WSSAYDVRTILLSIQSLLGEPNNDS 163
Query: 129 PAQTDGYHLFIQDPTEYKRRVRLQAKQYPPIV 160
P T L+ + E+++ V K Y P
Sbjct: 164 PLNTQAAALW-PNQDEFRKMVE---KLYKPTA 191
>Os07g0577400 Similar to Constitutive photomorphogenesis protein 10
Length = 202
Score = 80.9 bits (198), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 38 NLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
NL W TI G QG+ +EGG F L + F DYP KPP F +H NV +G + + I
Sbjct: 84 NLYHWLSTIIGPQGSPYEGGIFFLDIVFPIDYPFKPPMVTFKTRIYHCNVDSTGNLSMDI 143
Query: 98 LNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEY 145
L E GW PA+T+ ++L+ I+ ++ P+P P HL++ D T++
Sbjct: 144 LRE--GWSPALTISKVLLAIKAIITNPDPYCPLVPSIGHLYLTDRTKH 189
>Os09g0321900 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 31 TLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS 90
T +G +LM T+ +G + GG F TL YP +PPK K +HPN+
Sbjct: 50 TFPNGKDDLMNIEITLRPDEGY-YVGGAFVFTLQVPPTYPHEPPKVKCTTKVYHPNIDLD 108
Query: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
G VCL+IL ED W+P + + I+ G+ L QPN DP D + DP +++R V+
Sbjct: 109 GNVCLNILRED--WKPVLNINTIVYGLNLLFIQPNDEDPLNHDAAAVLRDDPQKFRRNVQ 166
>Os06g0660700 Similar to Ubiquitin-conjugating enzyme E2S (EC 6.3.2.19)
(Ubiquitin-conjugating enzyme E2-24 kDa)
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
(E2-EPF5)
Length = 252
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 9 RLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSED 68
+LA+E K+ ++ P G + + I G GT +E G F + L S D
Sbjct: 14 QLAKELKSLDESPPEGI-----KVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRD 68
Query: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPAD 128
+P PPK F FHPN+ SG +C++ L +D W P++ ++ +L+ ++ LL +P P
Sbjct: 69 FPQSPPKGFFLTKIFHPNIATSGEICVNTLKKD--WNPSLGLRHVLLVVRCLLIEPFPES 126
Query: 129 PAQTDGYHLFIQDPTEYKRRVRL 151
L +++ EY R RL
Sbjct: 127 ALNEQAGKLLLENYEEYARHARL 149
>Os01g0673600 Similar to Ubiquitin-conjugating enzyme E2
Length = 153
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 38 NLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
N+ ++ I G + +EGG F L L E+YP PK +F +HPN+ G +CL I
Sbjct: 33 NMRYFNVMILGPAQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDI 92
Query: 98 LNEDSGWRPAITVKQILVGIQDLLDQPNPADP 129
L + W PA+ ++ +L+ IQ LL PNP DP
Sbjct: 93 LKDK--WSPALQIRTVLLSIQALLSAPNPDDP 122
>Os08g0374100 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 183
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 31 TLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS 90
+ +G +LM + TI +G + GG F T YP +PPK K +HPN+
Sbjct: 50 SFPNGKDDLMNFEVTIRPDEGY-YVGGKFIFTFQVPPAYPHEPPKVKCKTKVYHPNIDLE 108
Query: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
G VCL+IL ED W+P + V I+ G+ L QPN DP + + +P +++R V+
Sbjct: 109 GNVCLNILRED--WKPVLNVNTIVYGLNLLFSQPNDEDPLNHEAAAVLRDNPEKFERNVQ 166
>Os10g0190000 Similar to Ubiquitin-conjugating enzyme E2 M (EC 6.3.2.19)
(Ubiquitin-protein ligase M) (Ubiquitin carrier protein
M) (Nedd8-conjugating enzyme Ubc12)
Length = 150
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 31 TLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPS 90
+ +G +LM + + +G + GG F T S YP +PPK K +HPN+
Sbjct: 17 SFPNGKDDLMNFEIIVRPDEGY-YLGGTFVFTFQVSPSYPHEPPKVKCKTKVYHPNIDLE 75
Query: 91 GTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVR 150
G VCL+IL ED W+P + + ++ G+ L QPN DP + + +P ++ V+
Sbjct: 76 GNVCLNILRED--WKPVLNINTVIYGLNLLFTQPNDEDPLNHEAAAVLRDNPKLFEANVK 133
>Os02g0634800 Ubiquitin-conjugating enzyme, E2 domain containing protein
Length = 157
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 6 ARGRLAEERKAWRKNHPHGFVAKPET-LADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLH 64
+R RL +E K ++ A P+ L N+ W I G T +EGG F L
Sbjct: 4 SRARLFKEYKEVQREKS----ADPDIQLICDDSNIFKWTALIKGPSETPFEGGVFQLAFS 59
Query: 65 FSEDYPSKPPKCKFPQGFFHPNV-YPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQ 123
E YP PP+ +F FHPNV + +G +CL IL + W PA T++ + I L+
Sbjct: 60 IPEQYPLLPPQVRFLTKIFHPNVHFKTGEICLDILK--NAWSPAWTLQSVCRAIIALMAH 117
Query: 124 PNPADPAQTDGYHLF 138
P P P D +L
Sbjct: 118 PEPDSPLNCDSGNLL 132
>Os01g0605300 Similar to Likely ubiquitin-conjugating enzyme e2
Length = 556
Score = 69.7 bits (169), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 7/143 (4%)
Query: 9 RLAEERKAWRKNHPHGFVAKPETLADGTVNLMIWHCTIPGKQGTDWEGGYFPLTLHFSED 68
R+ +E K + PHG +L+ + I G T + G F L + E
Sbjct: 10 RMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKIQIPER 69
Query: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILN--EDSGWRPAITVKQILVGIQDLLDQPNP 126
YP +PP F +HPN+ G +CL ILN W+P++ + +L I LL PNP
Sbjct: 70 YPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLLSDPNP 129
Query: 127 ADPAQTDGYHLFIQDPTEYKRRV 149
DG I +Y R+V
Sbjct: 130 -----DDGLMAEISREYKYNRQV 147
>D17786
Length = 103
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 70 PSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDSGWRPAITVKQILVGIQDLLDQPNPADP 129
P KPPK F FHPN+ +G++CL IL E W PA+T+ ++L+ I LL PN DP
Sbjct: 26 PFKPPKSSFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNGDDP 83
Query: 130 AQTDGYHLFIQDPTEYK 146
+ H++ D +Y+
Sbjct: 84 LVPEIAHMYKTDRAKYE 100
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.140 0.462
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,218,118
Number of extensions: 325229
Number of successful extensions: 607
Number of sequences better than 1.0e-10: 28
Number of HSP's gapped: 593
Number of HSP's successfully gapped: 28
Length of query: 160
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 67
Effective length of database: 12,179,899
Effective search space: 816053233
Effective search space used: 816053233
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 152 (63.2 bits)