BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0706500 Os02g0706500|AK073092
(616 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0706500 CbxX/CfqX family protein 1108 0.0
Os02g0697600 AAA ATPase domain containing protein 623 e-178
AK119311 91 2e-18
Os02g0740300 AAA ATPase domain containing protein 91 3e-18
Os03g0151800 Similar to Cell division control protein 48 ho... 90 5e-18
Os06g0714500 AAA ATPase domain containing protein 87 3e-17
Os06g0225900 AAA ATPase domain containing protein 85 2e-16
AK109969 83 5e-16
Os04g0284600 Similar to TAT-binding protein 1 (Fragment) 82 1e-15
Os06g0607800 Similar to 26S proteasome regulatory complex s... 81 3e-15
Os02g0199900 Similar to 26S proteasome regulatory complex s... 80 5e-15
Os02g0803700 Similar to 26S protease regulatory subunit 6A ... 79 7e-15
Os06g0173100 Similar to 26S protease regulatory subunit 6A ... 79 1e-14
Os02g0784700 Similar to 26S protease regulatory subunit 7 (... 79 1e-14
Os06g0192600 26S proteasome regulatory particle triple-A AT... 78 2e-14
Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.... 78 2e-14
Os07g0672500 SMAD/FHA domain containing protein 78 2e-14
Os02g0205300 Similar to TAT-binding protein homolog (Fragment) 77 3e-14
Os05g0584600 AAA ATPase domain containing protein 77 3e-14
Os08g0413000 Similar to Valosin-containing protein (Fragment) 77 4e-14
Os06g0600100 Similar to TAT-binding protein homolog (Fragment) 77 4e-14
Os02g0325100 Similar to 26S protease regulatory subunit 6B ... 76 9e-14
Os07g0691800 Similar to 26S proteasome subunit 4-like prote... 75 1e-13
Os01g0574500 Peptidase M41, FtsH domain containing protein 75 1e-13
Os03g0298400 Similar to 26S proteasome subunit 4-like prote... 75 1e-13
Os01g0141300 75 1e-13
Os01g0683100 Similar to Katanin p60 ATPase-containing subun... 75 1e-13
AK119842 75 2e-13
Os09g0515100 Similar to Cdc48 cell division control protein... 74 4e-13
Os01g0226400 AAA ATPase domain containing protein 73 6e-13
Os03g0344700 AAA ATPase domain containing protein 71 2e-12
Os01g0757400 Similar to Katanin p60 ATPase-containing subun... 71 2e-12
Os01g0842600 Similar to AAA-metalloprotease FtsH 71 2e-12
Os05g0458400 Similar to AAA-metalloprotease FtsH 71 3e-12
Os01g0673500 Similar to Katanin p60 ATPase-containing subun... 70 6e-12
>Os02g0706500 CbxX/CfqX family protein
Length = 616
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/616 (89%), Positives = 552/616 (89%)
Query: 1 MWRLRSRTXXXXXXXXXXXXXXXXXXXXXSGYSFFRRSSXXXXXXXXXXXXXXSEDSGTE 60
MWRLRSRT SGYSFFRRSS SEDSGTE
Sbjct: 1 MWRLRSRTAAAAAVIAASAASLADVAYADSGYSFFRRSSPPPPPPAAAAAAAASEDSGTE 60
Query: 61 VAVEVDSSGFDPESLERAARLLRKLNSSKYAKQLFELMRMQEKTRLAELEAEKVQYIIQQ 120
VAVEVDSSGFDPESLERAARLLRKLNSSKYAKQLFELMRMQEKTRLAELEAEKVQYIIQQ
Sbjct: 61 VAVEVDSSGFDPESLERAARLLRKLNSSKYAKQLFELMRMQEKTRLAELEAEKVQYIIQQ 120
Query: 121 HLRDIERQQKEGEKFRESLXXXXXXXXXKLRYDDELARKRMQTEREAQRRQDAELVKMQE 180
HLRDIERQQKEGEKFRESL KLRYDDELARKRMQTEREAQRRQDAELVKMQE
Sbjct: 121 HLRDIERQQKEGEKFRESLQQQAQAEAQKLRYDDELARKRMQTEREAQRRQDAELVKMQE 180
Query: 181 AAALRKEEVRRTTXXXXXXXXXXXXXXXXXXXXQNIQANAEAKGEALTREAKALEDYNRK 240
AAALRKEEVRRTT QNIQANAEAKGEALTREAKALEDYNRK
Sbjct: 181 AAALRKEEVRRTTEKKILEKMLEDEKEKALLKKQNIQANAEAKGEALTREAKALEDYNRK 240
Query: 241 MLLERINGDKEKWIAAINTTFSHIEGGFRMLLTDRSKLLMGVGGVTALAAGIYTTREGAK 300
MLLERINGDKEKWIAAINTTFSHIEGGFRMLLTDRSKLLMGVGGVTALAAGIYTTREGAK
Sbjct: 241 MLLERINGDKEKWIAAINTTFSHIEGGFRMLLTDRSKLLMGVGGVTALAAGIYTTREGAK 300
Query: 301 VTWGYINRILGQPSLIRESSMPKFPLSRFKALKSTSASLSGGAGFENVILHPSLKRRIEH 360
VTWGYINRILGQPSLIRESSMPKFPLSRFKALKSTSASLSGGAGFENVILHPSLKRRIEH
Sbjct: 301 VTWGYINRILGQPSLIRESSMPKFPLSRFKALKSTSASLSGGAGFENVILHPSLKRRIEH 360
Query: 361 LARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLGSEAVT 420
LARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLGSEAVT
Sbjct: 361 LARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLGSEAVT 420
Query: 421 KIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLV 480
KIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLV
Sbjct: 421 KIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLV 480
Query: 481 LATNRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQ 540
LATNRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQ
Sbjct: 481 LATNRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQ 540
Query: 541 RQKIQVKDISDDLLREAARKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYK 600
RQKIQVKDISDDLLREAARKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYK
Sbjct: 541 RQKIQVKDISDDLLREAARKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLMEVVEYK 600
Query: 601 VAEHHQRIKLASETST 616
VAEHHQRIKLASETST
Sbjct: 601 VAEHHQRIKLASETST 616
>Os02g0697600 AAA ATPase domain containing protein
Length = 640
Score = 623 bits (1606), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/557 (57%), Positives = 409/557 (73%), Gaps = 14/557 (2%)
Query: 67 SSGFDPESLERAARLLRKLNSSKYAKQLFELMRMQEKTRLAELEAEKVQYIIQQHLRDIE 126
++GFDPE+LER A +L+++ +S + K++FE+++ QE R AE +KV++ Q+ L IE
Sbjct: 79 AAGFDPEALERGAAMLKQIENSPHGKKVFEILKQQEDVRRAENLTKKVEF--QKELAAIE 136
Query: 127 RQQKEGE-KFRESLXXXXXXXXXKL-RYDDELARKRMQTEREAQRRQDAELVKMQEAAAL 184
++ + R+ L ++ RY+DELARKRMQ + EAQR ++ ELVKMQE +A+
Sbjct: 137 LEKTRVDYDERKKLEQQRAQVKSQMSRYEDELARKRMQADHEAQRVRNQELVKMQEESAI 196
Query: 185 RKEEVRRTTXXXXXXXXXXXXXXXXXXXXQNIQANAEAKGEALTREAKALEDYNRKMLLE 244
R+E++RR + Q A+ A + K ED R++L+E
Sbjct: 197 RQEQMRRAIEEQIQEERRKTDRAKAIVEKEIEQEKILAEANARIKLKKQTEDVERRLLIE 256
Query: 245 RINGDKEKWIAAINTTFSHIEGGFRMLLTDRSKLLMGVGGVTALAAGIYTTREGAKVTWG 304
+KEKW+ INTTF HI GG + +LTD++KL++ VGGVTALAAGIYTTREGA+V WG
Sbjct: 257 GAKAEKEKWVQLINTTFEHIGGGLQTILTDQNKLVVAVGGVTALAAGIYTTREGARVVWG 316
Query: 305 YINRILGQPSLIRESSMPKFPLSRF--KALKSTSASLSGGAGFE-------NVILHPSLK 355
Y++RILGQPSLIRESS K+P S +A+ + ++ L+ G+ +VIL+PSL+
Sbjct: 317 YVDRILGQPSLIRESSRGKYPWSGVFSRAMSTMTSKLNKGSNLGNNGNGFGDVILNPSLQ 376
Query: 356 RRIEHLARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG 415
+R++ LA ATANTK H APFRNMLFYGPPGTGKT+ ARE+ARKSGLDYA+MTGGDVAPLG
Sbjct: 377 KRVKQLANATANTKLHQAPFRNMLFYGPPGTGKTMAARELARKSGLDYALMTGGDVAPLG 436
Query: 416 SEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSR 475
S+AVTKIHQ+FDWAKKS +G+LLFIDEADAFLCERN T+MSEAQRSALNALLFRTGDQS+
Sbjct: 437 SQAVTKIHQLFDWAKKSNRGLLLFIDEADAFLCERNKTYMSEAQRSALNALLFRTGDQSK 496
Query: 476 DIVLVLATNRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKN-SFWD 534
DIVL LATNRP DLD+A+ DRIDEV+EFPLPGE+ER +L +LYL+ Y++K K+ W
Sbjct: 497 DIVLALATNRPGDLDSAVADRIDEVLEFPLPGEDERSKLFKLYLDKYIMKAGEKHEKSWL 556
Query: 535 SLLKKQRQKIQVKDISDDLLREAARKINGFSGREIAKLMASVQAAVYGRPDCVLDPQLLM 594
+ Q QKI+VK ++DDL+REAA K GFSGREIAKLMASVQAAVYG +CVL P L
Sbjct: 557 RFFRGQPQKIEVKGVTDDLIREAAAKTEGFSGREIAKLMASVQAAVYGSKECVLTPDLFR 616
Query: 595 EVVEYKVAEHHQRIKLA 611
EVV+YKVAEH QR +LA
Sbjct: 617 EVVDYKVAEHQQRRRLA 633
>AK119311
Length = 805
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 89/158 (56%), Gaps = 5/158 (3%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDV-APLGSEAVTKIHQIFDWAKKS 432
P R +L YGPPGTGKTL+AR +A ++G + ++ G ++ + L E+ + + + F+ A K+
Sbjct: 235 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 294
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTG-DQSRDIVLVLATNRPSDLDA 491
++FIDE DA +R TH +R L G QS ++++ ATNRP+ +D
Sbjct: 295 SPS-IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQSSHVIVMAATNRPNSIDG 353
Query: 492 AIT--DRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
A+ R D I+ +P R ++LR++ + L +D
Sbjct: 354 ALRRFGRFDREIDIGIPDATGRLEILRIHTKNMKLADD 391
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 313 PSLIRESSMPKFPLSRFKALKSTSASLSGGAGFENVILHPSLKRRIEHLARATAN----- 367
PS +RE+ ++ +A+ + G ENV KR ++ L +
Sbjct: 459 PSALRET-----------VVEVPNATWADVGGLENV------KRELQELVQYPVEHPDKF 501
Query: 368 TKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-SEAVTKIHQIF 426
K P R +LFYGPPG GK L+A+ +A + ++ + G ++ + E+ + +F
Sbjct: 502 LKFGMQPSRGVLFYGPPGCGKMLLAKAIANECQANFISVKGPELLTMWFGESEANVRDVF 561
Query: 427 DWAKKSRKGMLLFIDEADAFLCER--NSTHMSEAQRSALNALLFRTGDQS--RDIVLVLA 482
D A +S +LF DE D+ R N A +N +L +++ ++ A
Sbjct: 562 DKA-RSAAPCVLFFDELDSIAKSRGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGA 620
Query: 483 TNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
TNRP +D AI R+D++I PLP E+ R + R + + +D
Sbjct: 621 TNRPDIIDPAILRPGRLDQLIYIPLPDEKSREAIFRANMRKSPVADD 667
>Os02g0740300 AAA ATPase domain containing protein
Length = 611
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 116/256 (45%), Gaps = 35/256 (13%)
Query: 329 FKALKSTSASLSGGAGFENVILHPSLKRRIE--------------HLARATANTKSHDAP 374
F S SG +EN+ + KR IE +ARAT + P
Sbjct: 320 FDETSSIPMDGSGTVMWENIAGYEPQKREIEDTILLALQSPEVYDEIARATRCKFETNRP 379
Query: 375 FRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-------SEAVTKIHQIFD 427
R +LF GPPGTGKT AR +A+++G+ + PL E+ + +F
Sbjct: 380 -RAVLFEGPPGTGKTSSARVIAKQAGVPLLYV------PLEIIMSKYYGESERLLGSVFS 432
Query: 428 WAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTG--DQSRDIVLVLATNR 485
A G ++F+DE D+F R+S M EA R L+ +L + +Q R +V++ ATNR
Sbjct: 433 LANDLPDGGIIFLDEVDSFASARDS-EMHEATRRILSVILRQIDGFEQDRRVVVIAATNR 491
Query: 486 PSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQ 545
DLD A+ R D +I F LP ++ R ++ Y H E F SL ++
Sbjct: 492 KEDLDPALISRFDSIICFDLPDQQTRAEISAQYAKHLTKSE----LFQFSLATEEMSGRD 547
Query: 546 VKDISDDLLREAARKI 561
++DI R A K+
Sbjct: 548 IRDICQQAERHWASKL 563
>Os03g0151800 Similar to Cell division control protein 48 homolog A (AtCDC48a)
Length = 809
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDV-APLGSEAVTKIHQIFDWAKKS 432
P + +L YGPPG+GKTL+AR +A ++G + ++ G ++ + L E+ + + + F+ A+K+
Sbjct: 243 PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN 302
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGDQSRDIVLVL-ATNRPSDLDA 491
++FIDE D+ +R TH +R L G ++R V+V+ ATNRP+ +D
Sbjct: 303 APS-IIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKARSHVIVMGATNRPNSIDP 361
Query: 492 AI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
A+ R D I+ +P E R ++LR++ + L ED
Sbjct: 362 ALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAED 399
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 50/284 (17%)
Query: 301 VTWGYINRILG--QPSLIRESSMPKFPLSRFKALKSTSASLSGGAGFENVI--LHPSLKR 356
VT + LG PS +RE+ ++ + S G ENV L +++
Sbjct: 453 VTNDHFKTALGTSNPSALRET-----------VVEVPNVSWEDIGGLENVKRELQETVQY 501
Query: 357 RIEHLARATANTKSHDAPFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG- 415
+EH + K +P + +LFYGPPG GKTL+A+ +A + ++ + G ++ +
Sbjct: 502 PVEHPEKFE---KFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWF 558
Query: 416 SEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCERNST--HMSEAQRSALNALLFRT-GD 472
E+ + +IFD A++S +LF DE D+ +R S+ A LN LL G
Sbjct: 559 GESEANVREIFDKARQSAP-CVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGM 617
Query: 473 QSRDIVLVL-ATNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGK 529
++ V ++ ATNRP +D A+ R+D++I PLP ++ R Q+ + L
Sbjct: 618 NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDDQSRLQIFKACL---------- 667
Query: 530 NSFWDSLLKKQRQKIQVKDISDDLLREAARKINGFSGREIAKLM 573
R+ KD+ L A+ GFSG +I ++
Sbjct: 668 -----------RKSPVAKDVD---LNALAKYTQGFSGADITEIC 697
>Os06g0714500 AAA ATPase domain containing protein
Length = 393
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 91/154 (59%), Gaps = 11/154 (7%)
Query: 373 APFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLGS----EAVTKIHQIFDW 428
+P + +L YGPPGTGKT++A+ +A++SG A+ ++ L S +A + +F
Sbjct: 117 SPQKGVLLYGPPGTGKTMLAKAIAKESG---AVFINVRISNLMSKWFGDAQKLVSAVFSL 173
Query: 429 AKKSRKGMLLFIDEADAFLCERNSTH---MSEAQRSALNALLFRTGDQSRDIVLVLATNR 485
A K + ++FIDE D+FL +R +T M+ + ++ T DQ+ ++++ ATNR
Sbjct: 174 AHKLQPA-IIFIDEVDSFLGQRRTTDHEAMTNMKTEFMSLWDGFTTDQNARVMVLAATNR 232
Query: 486 PSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYL 519
PS+LD AI R ++ E +P + ER ++LR+ L
Sbjct: 233 PSELDEAILRRFTQIFEIGIPVQSERSKILRVVL 266
>Os06g0225900 AAA ATPase domain containing protein
Length = 271
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 121/246 (49%), Gaps = 28/246 (11%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAP--LG-SEAVTKIHQIFDWAK 430
P + +L +GPPGTGKTL+A+ +A ++G ++ +TG ++ G +E +TK +F +A
Sbjct: 15 PCKGILLFGPPGTGKTLLAKALATEAGANFISITGSNLTSKWFGDAEKLTK--ALFSFAS 72
Query: 431 KSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALL-----FRTGDQSRDIVLVLATNR 485
+ +++F+DE D+ L R EA R N + R+ + R I+++ ATNR
Sbjct: 73 RLAP-VIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQR-ILILGATNR 130
Query: 486 PSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQ 545
P DLD A+ R+ I LP + R ++L++ L KE+ ++ F L +
Sbjct: 131 PFDLDDAVIRRLPRRIYVDLPDSQNRMKILKILL----AKENLESDFRFDELANATEGYS 186
Query: 546 VKDISDDLLREAARKIN--------GFSGREIA----KLMASVQAAVYGRPDCVLDPQLL 593
D+ + + A R ++ G SG +I+ KL VQA P D +
Sbjct: 187 GSDLKNLCIAAAYRPVHELLEEEKGGVSGTKISLRPLKLEDFVQAKAKVSPSVAFDATSM 246
Query: 594 MEVVEY 599
E+ ++
Sbjct: 247 NELRKW 252
>AK109969
Length = 882
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 95/159 (59%), Gaps = 7/159 (4%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDV-APLGSEAVTKIHQIFDWAKKS 432
P R +L YGPPGTGKTL+AR +A ++ + ++ G ++ + + E+ + + + F+ A+K+
Sbjct: 294 PPRGVLMYGPPGTGKTLMARAVANETRAFFFLINGPEIMSKMAGESESNLRKAFEEAEKN 353
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNALL-FRTGDQSR-DIVLVLATNRPSDLD 490
+++IDE D+ +R T+ E +R ++ LL G ++R +IV++ ATNRP+ +D
Sbjct: 354 SPA-IIYIDEIDSIAPKREKTN-GEVERRVVSQLLTLMDGLKARSNIVVMAATNRPNSID 411
Query: 491 AAIT--DRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
A+ R D ++ +P R ++LR++ + L ED
Sbjct: 412 PALRRFGRFDREVDIAIPDPTGRLEILRIHTKNMKLAED 450
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 373 APFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-SEAVTKIHQIFDWAKK 431
AP + +LFYGPPGTGKTL+A+ +A + ++ + G ++ + E+ + +FD A+
Sbjct: 566 APSKGVLFYGPPGTGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARA 625
Query: 432 SRKGMLLFIDEADAFLCERNSTHMSEAQRS--ALNALLFRT-GDQSRDIVLVL-ATNRPS 487
+ ++F DE DA R S+ +N +L G SR V ++ ATNRP
Sbjct: 626 AAP-CVMFFDELDAIAKARGSSSGDSGGAGDRVINQILTEMDGVSSRKNVFIIGATNRPD 684
Query: 488 DLDAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQ 545
+D AI R+D++I PLP E R +L+ L + D +F
Sbjct: 685 QIDPAILRPGRLDQLIYIPLPDEPSRLSILKATLKKSPIAADVDLTFL------------ 732
Query: 546 VKDISDDLLREAARKINGFSGREIAKLM 573
A+ +GFSG ++A++
Sbjct: 733 ------------AKHTHGFSGADLAEIC 748
>Os04g0284600 Similar to TAT-binding protein 1 (Fragment)
Length = 357
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 13/178 (7%)
Query: 353 SLKRRIEHLARATANTKSHDAPF--------RNMLFYGPPGTGKTLVAREMARKSGLDYA 404
L+++IE L A H F + +L YGPPGTGKTLVA A ++ +
Sbjct: 118 GLEKQIEELVEAVVLPIIHKNCFQRLGIHPPKGVLLYGPPGTGKTLVAHAFASQTNATFL 177
Query: 405 MMTGGDVA-PLGSEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSAL 463
+TG +A L E + F AK+ + ++FIDE DA + + E Q++ +
Sbjct: 178 KLTGPQLAVKLIGEGARLVRDAFQLAKE-KAPCIIFIDEIDAIGSKHFDSGDREVQQTIV 236
Query: 464 NALLFRTGDQSRD-IVLVLATNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
L G S + I ++ ATNRP LD A + R+D+ IEFP P E+ R ++L ++
Sbjct: 237 ELLNQLDGVGSYESIKVIAATNRPEVLDPAFLRSGRLDQKIEFPHPSEQARVRILEIH 294
>Os06g0607800 Similar to 26S proteasome regulatory complex subunit p42D
Length = 401
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 86/152 (56%), Gaps = 8/152 (5%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDY-AMMTGGDVAPLGSEAVTKIHQIFDWAKKS 432
P + +L YGPPGTGKTL+AR +A ++ +++ + E+ I ++F +A++
Sbjct: 174 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFSYAREH 233
Query: 433 RKGMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPSD 488
+ ++F+DE DA R S S E QR+ + L G D+ + +++ATNRP
Sbjct: 234 QP-CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDV 292
Query: 489 LDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
LD A+ R+D IE PLP E+ R ++L+++
Sbjct: 293 LDPALLRPGRLDRKIEIPLPNEQSRMEVLKIH 324
>Os02g0199900 Similar to 26S proteasome regulatory complex subunit p42D
Length = 400
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 8/152 (5%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDY-AMMTGGDVAPLGSEAVTKIHQIFDWAKKS 432
P + +L YGPPGTGKTL+AR +A ++ +++ + E+ I ++F +A +
Sbjct: 173 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYA-RD 231
Query: 433 RKGMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPSD 488
+ ++F+DE DA R S S E QR+ + L G D+ + +++ATNRP
Sbjct: 232 HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDV 291
Query: 489 LDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
LD A+ R+D IE PLP E+ R ++L+++
Sbjct: 292 LDPALLRPGRLDRKIEIPLPNEQARMEVLKIH 323
>Os02g0803700 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1)
Length = 429
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 354 LKRRIEHLARATANTKSHDA--------PFRNMLFYGPPGTGKTLVAREMARKSGLDYAM 405
L+++I+ L A +H P + +L YGPPGTGKTL+AR A ++ +
Sbjct: 181 LEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 240
Query: 406 MTGGDVAPLG-SEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMS---EAQRS 461
+ G + + + + F AK+ + ++FIDE DA +R + +S E QR+
Sbjct: 241 LAGPQLVQMFIGDGAKLVRDAFQLAKE-KSPCIIFIDEIDAIGTKRFDSEVSGDREVQRT 299
Query: 462 ALNALLFRTGDQSRD-IVLVLATNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
L L G S + I ++ ATNR LD A+ + R+D IEFP P EE R ++L+++
Sbjct: 300 MLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIH 359
>Os06g0173100 Similar to 26S protease regulatory subunit 6A homolog (TAT-binding
protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
(LEMA-1)
Length = 429
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 354 LKRRIEHLARATANTKSHDA--------PFRNMLFYGPPGTGKTLVAREMARKSGLDYAM 405
L+++I+ L A +H P + +L YGPPGTGKTL+AR A ++ +
Sbjct: 181 LEKQIQELVEAIVLPMTHKDRFQKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLK 240
Query: 406 MTGGDVAPLG-SEAVTKIHQIFDWAKKSRKGMLLFIDEADAFLCERNSTHMS---EAQRS 461
+ G + + + + F AK+ + ++FIDE DA +R + +S E QR+
Sbjct: 241 LAGPQLVQMFIGDGAKLVRDAFQLAKE-KAPCIIFIDEIDAIGTKRFDSEVSGDREVQRT 299
Query: 462 ALNALLFRTGDQSRD-IVLVLATNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
L L G S + I ++ ATNR LD A+ + R+D IEFP P EE R ++L+++
Sbjct: 300 MLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPSEEARARILQIH 359
>Os02g0784700 Similar to 26S protease regulatory subunit 7 (26S proteasome
subunit 7) (26S proteasome AAA-ATPase subunit RPT1)
(Regulatory particle triple-A ATPase subunit 1)
Length = 235
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD-VAPLGSEAVTKIHQIFDWAKKS 432
P + +L YGPPGTGKTL+AR +A ++ + + G + V E + ++F A +S
Sbjct: 10 PPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA-RS 68
Query: 433 RKGMLLFIDEADAFLCERNSTHM---SEAQRSALNALLFRTGDQSR-DIVLVLATNRPSD 488
+K ++F DE DA R + +E QR+ L + G +R +I +++ATNRP
Sbjct: 69 KKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDT 128
Query: 489 LDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
LD A+ R+D +EF LP E R Q+ +++
Sbjct: 129 LDPALLRPGRLDRKVEFGLPDLEGRTQIFKIH 160
>Os06g0192600 26S proteasome regulatory particle triple-A ATPase subunit1 (26S
protease regulatory subunit 7)
Length = 426
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD-VAPLGSEAVTKIHQIFDWAKKS 432
P + +L YGPPGTGKTL+AR +A ++ + + G + V E + ++F A +S
Sbjct: 201 PPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMA-RS 259
Query: 433 RKGMLLFIDEADAFLCERNSTHM---SEAQRSALNALLFRTGDQSR-DIVLVLATNRPSD 488
+K ++F DE DA R + +E QR+ L + G +R +I +++ATNRP
Sbjct: 260 KKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDT 319
Query: 489 LDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
LD A+ R+D +EF LP E R Q+ +++
Sbjct: 320 LDPALLRPGRLDRKVEFGLPDLEGRTQIFKIH 351
>Os01g0574400 Similar to Cell division protein ftsH (EC 3.4.24.-)
Length = 709
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 105/215 (48%), Gaps = 35/215 (16%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPL-GSEAVTKIHQIFDWAKKSRK 434
+ +L GPPGTGKT++AR +A ++G+ + +G + + ++ +F AKK R
Sbjct: 257 KGVLLVGPPGTGKTMLARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKK-RS 315
Query: 435 GMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGD--QSRDIVLVLATNRPSDLDAA 492
++F+DE DA RN + R LN LL Q+ I+++ ATN P LD A
Sbjct: 316 PCIIFMDEIDAIGGSRNPKD-QQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKA 374
Query: 493 IT--DRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDIS 550
+ R D I P P E R Q+L +MLK +LK S
Sbjct: 375 LVRPGRFDRHIVVPNPDVEGRRQILE----SHMLK----------VLK-----------S 409
Query: 551 DDL-LREAARKINGFSGREIAKL--MASVQAAVYG 582
DD+ L AR GFSG ++A L +A+++AA+ G
Sbjct: 410 DDVDLMIIARGTPGFSGADLANLVNVAALKAAMDG 444
>Os07g0672500 SMAD/FHA domain containing protein
Length = 1081
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 34/209 (16%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAP-LGSEAVTKIHQIFDWAKKS 432
P + +L +GPPGTGKT++A+ +A ++G ++ ++ +A E + +F A K
Sbjct: 813 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSIASKWFGEGEKYVKAVFSLASKI 872
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNALL-----FRTGDQSRDIVLVLATNRPS 487
++F+DE D L R + EA R N + RT D+ R +VL ATNRP
Sbjct: 873 APS-VIFVDEVDGMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA-ATNRPF 930
Query: 488 DLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVK 547
DLD A+ R+ + LP R ++L + L +
Sbjct: 931 DLDEAVVRRLPRRLMVNLPDASNRKKILSVILAK-------------------------E 965
Query: 548 DISDDLLREA-ARKINGFSGREIAKLMAS 575
D++DD+ EA A +G+SG ++ L +
Sbjct: 966 DLADDVDLEALANLTDGYSGSDMKNLCVT 994
>Os02g0205300 Similar to TAT-binding protein homolog (Fragment)
Length = 424
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD-VAPLGSEAVTKIHQIFDWAKKSRK 434
+ +L YGPPGTGKTL+AR +A + + ++G + V E + ++F A++
Sbjct: 201 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 260
Query: 435 GMLLFIDEADAFLCERNSTHM----SEAQRSALNALLFRTG-DQSRDIVLVLATNRPSDL 489
++F+DE D+ R + SE QR+ L L G + S I +++ATNR L
Sbjct: 261 S-IIFMDEIDSIGSARMESGTGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDIL 319
Query: 490 DAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
D A+ RID IEFP P E+ RF +L+++
Sbjct: 320 DQALLRPGRIDRKIEFPNPNEDSRFDILKIH 350
>Os05g0584600 AAA ATPase domain containing protein
Length = 855
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 12/162 (7%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDV-APLGSEAVTKIHQIFDWAKKS 432
P R +L +GPPGTGKT++A+ +A +G + ++ + + E + +F A K
Sbjct: 534 PCRGILLFGPPGTGKTMLAKAIANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKV 593
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQR-------SALNALLFRTGDQSRDIVLVLATNR 485
++F+DE D+ L +R EA R S + LL ++G++ I+++ ATNR
Sbjct: 594 AP-TIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDGLLSKSGER---ILVLAATNR 649
Query: 486 PSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
P DLD AI R + I LP + R +LR L+ + ED
Sbjct: 650 PFDLDEAIIRRFERRIMVGLPTLDSRELILRTLLSKEKVAED 691
>Os08g0413000 Similar to Valosin-containing protein (Fragment)
Length = 848
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDV---APLGSEAVTKIHQIFDWAK 430
P + +L YGPPGTGKTL+AR +A +SG + ++ G ++ P SEA + A
Sbjct: 248 PPKGILLYGPPGTGKTLLARAIAAESGAHFVVVNGPEIMSGMPGESEANLRAVFAEADAA 307
Query: 431 KSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALL-FRTGDQSRDIVLVL-ATNRPSD 488
++F+DE D+ R H E +R ++ LL G + R V+V+ ATNRP+
Sbjct: 308 APS---IVFMDEIDSIAPSREKAH-GEVERRVVSQLLTLMDGLRPRAQVIVIGATNRPNS 363
Query: 489 LDAAIT--DRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED------GKNSFW------- 533
LD A+ R D ++ +P E R ++LR++ + L +D GK++
Sbjct: 364 LDPALRRFGRFDRELDIGVPDELGRLEILRIHTKNMPLSDDVDLERVGKDTHGFVGSDLA 423
Query: 534 ----DSLLKKQRQKIQVKDISDDLL 554
++ ++ R+K+ + DI +D +
Sbjct: 424 SLCSEAAMQCIREKLDIIDIENDTI 448
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 373 APFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-SEAVTKIHQIFDWAKK 431
+P R +LFYGPPG GKT++A+ +A++ ++ + G ++ + E+ + +FD A++
Sbjct: 521 SPSRGVLFYGPPGCGKTMMAKAIAKECKANFISIKGPELLTMWFGESEGNVRNLFDKARQ 580
Query: 432 SRKGMLLFIDEADAFLCERNST--HMSEAQRSALNALLFRT-GDQSRDIVLVL-ATNRPS 487
S +LF DE D+ +R ++ LN LL G ++ V V+ ATNRP
Sbjct: 581 SAP-CILFFDELDSIAVKRGNSVGDAGGTPDRVLNQLLTEMDGINAKKTVFVIGATNRPD 639
Query: 488 DLDAAI--TDRIDEVIEFPLPGEEERFQLLRLYL 519
+D A+ R+D++I PLP R ++ R L
Sbjct: 640 IIDPAMLRPGRLDQLIYIPLPDASSRLEIFRANL 673
>Os06g0600100 Similar to TAT-binding protein homolog (Fragment)
Length = 423
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD-VAPLGSEAVTKIHQIFDWAKKSRK 434
+ +L YGPPGTGKTL+AR +A + + ++G + V E + ++F A++
Sbjct: 200 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 259
Query: 435 GMLLFIDEADAFLCERNSTHM----SEAQRSALNALLFRTG-DQSRDIVLVLATNRPSDL 489
++F+DE D+ R + SE QR+ L L G + S I +++ATNR L
Sbjct: 260 S-IIFMDEIDSIGSARMQSGSGGGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRMDIL 318
Query: 490 DAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
D A+ RID IEFP P E+ RF +L+++
Sbjct: 319 DQALLRPGRIDRKIEFPNPNEDSRFDILKIH 349
>Os02g0325100 Similar to 26S protease regulatory subunit 6B (MIP224) (MB67
interacting protein) (TAT-binding protein-7) (TBP-7)
Length = 419
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD-VAPLGSEAVTKIHQIFDWAKKS 432
P R +L YGPPGTGKT++A+ +A + + + G + V E + +F AK++
Sbjct: 199 PPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKEN 258
Query: 433 RKGMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRTG-DQSRDIVLVLATNRPSD 488
++FIDE DA R E QR + L G DQ+ ++ +++ATNR
Sbjct: 259 APA-IIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADT 317
Query: 489 LDAAI--TDRIDEVIEFPLPGEEER---FQLLRLYLN 520
LD A+ R+D IEFPLP ++ FQ+ +N
Sbjct: 318 LDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMN 354
>Os07g0691800 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 448
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTG--------GDVAPLGSEAVTKIHQI 425
P + ++ YG PGTGKTL+A+ +A + + + G GD G + V ++ ++
Sbjct: 226 PPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGD----GPKLVRELFRV 281
Query: 426 FDWAKKSRKGMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRTGDQSR-DIVLVL 481
D S ++FIDE DA +R H E QR+ L L G SR D+ ++L
Sbjct: 282 ADELSPS----IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL 337
Query: 482 ATNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
ATNR LD A+ RID IEFPLP + R ++ +++ + L +D
Sbjct: 338 ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADD 385
>Os01g0574500 Peptidase M41, FtsH domain containing protein
Length = 715
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 102/215 (47%), Gaps = 35/215 (16%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPL-GSEAVTKIHQIFDWAKKSRK 434
+ +L GPPGTGKT++AR +A ++G+ + +G + + ++ +F AKK R
Sbjct: 264 KGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKK-RS 322
Query: 435 GMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTGD--QSRDIVLVLATNRPSDLDAA 492
++F+DE DA RN + + LN LL Q+ I+++ ATN P LD A
Sbjct: 323 PCIIFMDEIDAIGGSRNPKD-QQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKA 381
Query: 493 IT--DRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDIS 550
+ R D I P P E R Q+L S +LK S
Sbjct: 382 LVRPGRFDRHIVVPNPDVEGRRQILE--------------SHMSKVLK-----------S 416
Query: 551 DDL-LREAARKINGFSGREIAKL--MASVQAAVYG 582
DD+ L AR GFSG ++A L +A+++AA+ G
Sbjct: 417 DDVDLMIIARGTPGFSGADLANLVNVAALKAAMDG 451
>Os03g0298400 Similar to 26S proteasome subunit 4-like protein (26S proteasome
subunit AtRPT2a)
Length = 450
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 22/168 (13%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTG--------GDVAPLGSEAVTKIHQI 425
P + ++ YG PGTGKTL+A+ +A + + + G GD G + V ++ ++
Sbjct: 228 PPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGD----GPKLVRELFRV 283
Query: 426 FDWAKKSRKGMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRTGDQSR-DIVLVL 481
D S ++FIDE DA +R H E QR+ L L G SR D+ ++L
Sbjct: 284 ADDLSPS----IVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVIL 339
Query: 482 ATNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
ATNR LD A+ RID IEFPLP + R ++ +++ + L +D
Sbjct: 340 ATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLADD 387
>Os01g0141300
Length = 448
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 5/151 (3%)
Query: 373 APFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGD-VAPLGSEAVTKIHQIFDWAKK 431
+P++ L YGPPGTGK+ +A +A + + ++ D V+ E+ + +F A++
Sbjct: 140 SPWKAFLLYGPPGTGKSYLAEAVATEVDSTFFSISSSDLVSKWMGESEKLVANLFQMARE 199
Query: 432 SRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFRTG--DQSRDIVLVL-ATNRPSD 488
+ ++FIDE D+ +R + +EA R LL + D S D VLVL ATN P
Sbjct: 200 NAPS-IIFIDEIDSLCGQRGECNENEASRRIKTELLVQMQGFDNSNDKVLVLAATNMPHV 258
Query: 489 LDAAITDRIDEVIEFPLPGEEERFQLLRLYL 519
LD A+ R D+ I PLP + R ++++
Sbjct: 259 LDQAMRRRFDKCIYIPLPDLKARKDTFKIHI 289
>Os01g0683100 Similar to Katanin p60 ATPase-containing subunit (EC 3.6.4.3)
(Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
(Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
(AtAAA1)
Length = 519
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAP-LGSEAVTKIHQIFDWAKKS 432
P++ +L +GPPGTGKTL+A+ +A + G + ++ +A E+ + +FD A+
Sbjct: 267 PWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARFY 326
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNALLFR---------TGDQSRDIVLVL-A 482
+FIDE D+ R ++ E+ R + LL + T D IV+VL A
Sbjct: 327 APST-IFIDEIDSLCTSRGASGEHESSRRVKSELLVQIDGVNNSSTTEDGQPKIVMVLAA 385
Query: 483 TNRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQ 542
TN P D+D A+ R+++ I PLP E R L+ + L
Sbjct: 386 TNFPWDIDEALRRRLEKRIYIPLPNFESRKALININLK---------------------- 423
Query: 543 KIQVKDISDDLLREAARKINGFSGREIAKLM 573
V+ +D + E AR+ G+SG ++ +
Sbjct: 424 --TVEVATDVDIDEVARRTEGYSGDDLTNVC 452
>AK119842
Length = 769
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 99/206 (48%), Gaps = 33/206 (16%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGG--DVAPLGSEAVTKIHQIFDWAKKSR 433
+ +L GPPGTGKTL+AR +A ++G+ + ++G D +G A ++ ++F A +++
Sbjct: 325 KGVLLIGPPGTGKTLLARAVAGEAGVPFFYVSGSEFDEVYVGVGA-KRVRELFT-AARAK 382
Query: 434 KGMLLFIDEADAFLCERNSTHMSEAQRSALNALL--FRTGDQSRDIVLVLATNRPSDLDA 491
++FIDE DA +R S + R LN LL DQS ++ + ATN P LD+
Sbjct: 383 SPAIVFIDELDAVGGKRVSRD-ANYHRQTLNQLLNDLDGFDQSTGVIFIAATNHPELLDS 441
Query: 492 AIT--DRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVKDI 549
A+T R D ++ LP R ++LK +KI++
Sbjct: 442 ALTRPGRFDRHVQVELPDVSGRL----------------------AILKYHTKKIRLNPE 479
Query: 550 SDDLLREAARKINGFSGREIAKLMAS 575
D L AR GFSG E+ L S
Sbjct: 480 ID--LSTIARGTPGFSGAELENLANS 503
>Os09g0515100 Similar to Cdc48 cell division control protein 48, AAA family
Length = 1198
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 85/158 (53%), Gaps = 12/158 (7%)
Query: 371 HDAPFRNMLFYGPPGTGKTLVAREM---ARKSG--LDYAMMTGGDV-APLGSEAVTKIHQ 424
H P R +L GPPGTGKTL+AR + A K+G + + M G DV + EA ++
Sbjct: 394 HITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKL 453
Query: 425 IFDWAKKSRKGMLLFIDEADAFLCERNSTHMSEAQRSALNALL-FRTGDQSR-DIVLVLA 482
+F+ A+K++ ++F DE D R+S + S ++ LL G SR +VL+ A
Sbjct: 454 LFEEAQKNQPS-IIFFDEIDGLAPVRSSKQ-EQIHNSIVSTLLALMDGLDSRGQVVLIGA 511
Query: 483 TNRPSDLDAAI--TDRIDEVIEFPLPGEEERFQLLRLY 518
TNR +D A+ R D FPLPG E R ++L ++
Sbjct: 512 TNRIDAIDGALRRPGRFDREFFFPLPGYEARAEILDIH 549
>Os01g0226400 AAA ATPase domain containing protein
Length = 840
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDV-APLGSEAVTKIHQIFDWAKKS 432
P R +L +GPPGTGKT++A+ +A ++ + ++ + + E + +F A K
Sbjct: 565 PCRGILLFGPPGTGKTMLAKAIANEAQASFINVSMSTITSKWFGEDEKNVRALFTLAAKV 624
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNAL------LFRTGDQSRDIVLVLATNRP 486
++F+DE D+ L +RN EA R N L DQ I+++ ATNRP
Sbjct: 625 SP-TIIFVDEVDSMLGQRNRAGEHEAMRKIKNEFMTHWDGLLSRPDQK--ILVLAATNRP 681
Query: 487 SDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLN 520
DLD AI R + I LP E R +LR L+
Sbjct: 682 FDLDEAIIRRFERRIMVGLPSLESRELILRSLLS 715
>Os03g0344700 AAA ATPase domain containing protein
Length = 666
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 374 PFRNMLFYGPPGTGKTLVAREMARKSGLDY-AMMTGGDVAPLGSEAVTKIHQIFDWAKKS 432
P + +L +GPPGTGKT++A+ +A ++G ++ + + E + +F A K
Sbjct: 398 PCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSISSKWFGEGEKFVKAVFSLASKI 457
Query: 433 RKGMLLFIDEADAFLCERNSTHMSEAQRSALNALL-----FRTGDQSRDIVLVLATNRPS 487
++F+DE D L R + EA R N + RT D+ R +VL ATNRP
Sbjct: 458 APS-VIFVDEVDGMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLA-ATNRPF 515
Query: 488 DLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKED 527
DLD A+ R+ + LP R ++L + L L +D
Sbjct: 516 DLDEAVVRRLPRRLMVNLPDASNRRKILSVILAKEDLADD 555
>Os01g0757400 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 386
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 101/206 (49%), Gaps = 38/206 (18%)
Query: 373 APFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPL---GSEAVTKIHQIFDWA 429
+P++ +L +GPPGTGKT++A+ +A + + ++ + SE + K+ +F+ A
Sbjct: 133 SPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKV--LFELA 190
Query: 430 KKSRKGMLLFIDEADAFLCERN---STHMSEAQRSALNALLFRTG--DQSRDIVLVL-AT 483
+ +F+DE DA + +R S H EA R LL + ++ D+V VL AT
Sbjct: 191 RHHAPST-IFLDEIDAIISQRGEARSEH--EASRRLKTELLIQMDGLTKTNDLVFVLAAT 247
Query: 484 NRPSDLDAAITDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQK 543
N P +LDAA+ R+++ I PLP E R H M +E LL K
Sbjct: 248 NLPWELDAAMLRRLEKRILVPLPEAEAR---------HAMFEE---------LLPSTTSK 289
Query: 544 IQVKDISDDLLREAARKINGFSGREI 569
++V D L E K G+SG +I
Sbjct: 290 LEV---PYDTLVE---KTEGYSGSDI 309
>Os01g0842600 Similar to AAA-metalloprotease FtsH
Length = 802
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-SEAVTKIHQIFDWAKKSRK 434
+ L GPPGTGKTL+A+ A +SG+ + ++G D + +++ +F A++
Sbjct: 354 KGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSP 413
Query: 435 GMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRT-GDQSRDIVLVLA-TNRPSDL 489
++FIDE DA R S + + S LN LL G + V+VLA TNRP L
Sbjct: 414 S-IVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDIL 472
Query: 490 DAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVK 547
D A+ R D I P + R Q+ R+YL LK D + SF+ L
Sbjct: 473 DKALLRPGRFDRQISIDKPDIKGRDQIFRIYLKK--LKLDKEPSFYSQRLAALTPGFAGA 530
Query: 548 DISDDLLREAA 558
DI+ ++ EAA
Sbjct: 531 DIA-NVCNEAA 540
>Os05g0458400 Similar to AAA-metalloprotease FtsH
Length = 822
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 376 RNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPLG-SEAVTKIHQIFDWAKKSRK 434
+ L GPPGTGKTL+A+ A +SG+ + ++G D + +++ +F A++
Sbjct: 369 KGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAP 428
Query: 435 GMLLFIDEADAFLCERNSTHMS---EAQRSALNALLFRT-GDQSRDIVLVLA-TNRPSDL 489
++FIDE DA R S + + S LN LL G + V+VLA TNRP L
Sbjct: 429 S-IIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDIL 487
Query: 490 DAAI--TDRIDEVIEFPLPGEEERFQLLRLYLNHYMLKEDGKNSFWDSLLKKQRQKIQVK 547
D A+ R D I P + R Q+ R+YL LK D + SF+ L
Sbjct: 488 DKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKK--LKLDNEPSFYSQRLAALTPGFAGA 545
Query: 548 DISDDLLREAA 558
DI+ ++ EAA
Sbjct: 546 DIA-NVCNEAA 555
>Os01g0673500 Similar to Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)
(Katanin p60 subunit A1) (p60 katanin). Splice isoform 2
Length = 370
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 14/152 (9%)
Query: 373 APFRNMLFYGPPGTGKTLVAREMARKSGLDYAMMTGGDVAPL---GSEAVTKIHQIFDWA 429
+P++ +L +GPPGTGKT++A+ +A + + ++ + SE + K+ +F+ A
Sbjct: 121 SPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSIVSKWRGDSEKLVKV--LFELA 178
Query: 430 KKSRKGMLLFIDEADAFLCERN---STHMSEAQRSALNALLFRTGDQSR--DIVLVL-AT 483
+ +F+DE DA + +R S H EA R LL + ++ D+V VL AT
Sbjct: 179 RHHAPST-IFLDEIDAIISQRGEARSEH--EASRRLKTELLIQMDGLTKTDDLVFVLAAT 235
Query: 484 NRPSDLDAAITDRIDEVIEFPLPGEEERFQLL 515
N P +LDAA+ R+++ I PLP +E R +
Sbjct: 236 NLPWELDAAMLRRLEKRILVPLPEQEARHAMF 267
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,748,376
Number of extensions: 638879
Number of successful extensions: 2186
Number of sequences better than 1.0e-10: 41
Number of HSP's gapped: 2129
Number of HSP's successfully gapped: 45
Length of query: 616
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 509
Effective length of database: 11,448,903
Effective search space: 5827491627
Effective search space used: 5827491627
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)