BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0367900 Os01g0367900|AK105265
(1107 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0367900 Similar to Possible global transcription activ... 1905 0.0
Os05g0150300 Similar to Possible global transcription activ... 1758 0.0
Os05g0144300 DEAD/DEAH box helicase, N-terminal domain cont... 462 e-130
Os06g0183800 Similar to Chromatin remodeling factor CHD3 (G... 396 e-110
Os07g0497000 Similar to Mi-2 autoantigen-like protein (Heli... 359 8e-99
Os01g0881000 Zinc finger, FYVE/PHD-type domain containing p... 349 8e-96
Os03g0101700 Similar to SNF2P 339 7e-93
Os01g0102800 DEAD/DEAH box helicase, N-terminal domain cont... 267 3e-71
AK111184 193 5e-49
Os07g0660200 Similar to Chromodomain-helicase-DNA-binding p... 184 4e-46
Os04g0566100 Similar to Transcriptional activator SRCAP 176 1e-43
Os02g0762800 DEAD/DEAH box helicase, N-terminal domain cont... 174 3e-43
Os02g0689800 DEAD/DEAH box helicase domain containing protein 161 3e-39
Os07g0636200 DEAD/DEAH box helicase, N-terminal domain cont... 132 1e-30
Os05g0247900 DEAD/DEAH box helicase, N-terminal domain cont... 126 1e-28
Os04g0177300 DEAD/DEAH box helicase, N-terminal domain cont... 112 2e-24
Os10g0457700 Zinc finger, FYVE/PHD-type domain containing p... 112 2e-24
Os02g0650800 111 3e-24
Os02g0527100 DEAD/DEAH box helicase, N-terminal domain cont... 109 1e-23
Os05g0392400 SNF2-related domain containing protein 106 9e-23
Os01g0636700 RNA-binding region RNP-1 (RNA recognition moti... 105 2e-22
AK110250 105 2e-22
Os07g0642400 DEAD/DEAH box helicase, N-terminal domain cont... 97 9e-20
Os01g0779400 SWAP/Surp domain containing protein 93 1e-18
Os08g0180300 DEAD/DEAH box helicase, N-terminal domain cont... 91 4e-18
Os07g0511500 SNF2-related domain containing protein 91 4e-18
Os06g0255700 DEAD/DEAH box helicase, N-terminal domain cont... 90 8e-18
Os04g0629300 DEAD/DEAH box helicase, N-terminal domain cont... 86 2e-16
Os09g0442700 SNF2-related domain containing protein 80 9e-15
Os07g0598300 DEAD/DEAH box helicase, N-terminal domain cont... 74 7e-13
Os04g0692750 DEAD/DEAH box helicase, N-terminal domain cont... 73 1e-12
Os07g0434500 DEAD/DEAH box helicase, N-terminal domain cont... 70 8e-12
>Os01g0367900 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1107
Score = 1905 bits (4934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 926/987 (93%), Positives = 926/987 (93%)
Query: 121 KREKARXXXXXXXXXXXXXXXXDTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQS 180
KREKAR DTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQS
Sbjct: 121 KREKARLKEMQKLKKQKIQEILDTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQS 180
Query: 181 KEKKPRGRGRHASKMTXXXXXXXXXXXXXDALAGSGGTRLLSQPSCIKGKMRDYQLAGLN 240
KEKKPRGRGRHASKMT DALAGSGGTRLLSQPSCIKGKMRDYQLAGLN
Sbjct: 181 KEKKPRGRGRHASKMTEEEEDEEYLKEEEDALAGSGGTRLLSQPSCIKGKMRDYQLAGLN 240
Query: 241 WLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQ 300
WLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQ
Sbjct: 241 WLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQ 300
Query: 301 RFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDE 360
RFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDE
Sbjct: 301 RFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDE 360
Query: 361 AHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF 420
AHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF
Sbjct: 361 AHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF 420
Query: 421 QISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQ 480
QISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQ
Sbjct: 421 QISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQ 480
Query: 481 KDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVXXXXX 540
KDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMV
Sbjct: 481 KDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVLLDKL 540
Query: 541 XXXXXXXXSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSE 600
SRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSE
Sbjct: 541 LPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSE 600
Query: 601 KFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEY 660
KFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEY
Sbjct: 601 KFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEY 660
Query: 661 TIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDED 720
TIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDED
Sbjct: 661 TIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDED 720
Query: 721 IDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKEENKLDFKKLVSDNWI 780
IDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKEENKLDFKKLVSDNWI
Sbjct: 721 IDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKEENKLDFKKLVSDNWI 780
Query: 781 EPPRRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEVR 840
EPPRRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEVR
Sbjct: 781 EPPRRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEVR 840
Query: 841 YLMQANQKKDTIDGEDEDXXXXXXXXXXXXXXXXXXXGFATWTRRDFNTFIRACEKYGRN 900
YLMQANQKKDTIDGEDED GFATWTRRDFNTFIRACEKYGRN
Sbjct: 841 YLMQANQKKDTIDGEDEDQLEPLTAEEQEEKEQLLEEGFATWTRRDFNTFIRACEKYGRN 900
Query: 901 DIRSIAAEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMRAIGK 960
DIRSIAAEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMRAIGK
Sbjct: 901 DIRSIAAEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMRAIGK 960
Query: 961 KLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFD 1020
KLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFD
Sbjct: 961 KLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFD 1020
Query: 1021 WFVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKDKRMAKNMTPTKRSALRVSEGE 1080
WFVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKDKRMAKNMTPTKRSALRVSEGE
Sbjct: 1021 WFVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKDKRMAKNMTPTKRSALRVSEGE 1080
Query: 1081 TTPSNSFKRRRQSLMDDYVGSGRRKRG 1107
TTPSNSFKRRRQSLMDDYVGSGRRKRG
Sbjct: 1081 TTPSNSFKRRRQSLMDDYVGSGRRKRG 1107
>Os05g0150300 Similar to Possible global transcription activator SNF2L1 (SWI/SNF
related matrix associated actin dependent regulator of
chromatin subfamily A member 1)
Length = 1158
Score = 1758 bits (4554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 850/989 (85%), Positives = 893/989 (90%), Gaps = 7/989 (0%)
Query: 121 KREKARXXXXXXXXXXXXXXXXDTQNAAVDADMNNKGKGRLKYLLQQTEIFAHFAKGNQS 180
KRE+A+ D QN A+DADMNNKGKGRLKYLLQQTEIFAHFAKGNQS
Sbjct: 175 KRERAKLREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAHFAKGNQS 234
Query: 181 KEKKPRGRGRHASKMTXXXXXXXXXXXXXDALAGSGGTRLLSQPSCIKGKMRDYQLAGLN 240
EKK RGRGRHASKMT DAL G+GGTRL+SQPSCIKGKMRDYQLAGLN
Sbjct: 235 TEKKSRGRGRHASKMTEEEEDEEYLKEEEDALDGAGGTRLVSQPSCIKGKMRDYQLAGLN 294
Query: 241 WLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQ 300
WLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNW+KEIQ
Sbjct: 295 WLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQ 354
Query: 301 RFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDE 360
RFCP+LRA+KFLGNPEERNHIRENLL PGKFDVCVTSFEMAIKEKT LKRFSWRYIIIDE
Sbjct: 355 RFCPVLRAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDE 414
Query: 361 AHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWF 420
AHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFD+WF
Sbjct: 415 AHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWF 474
Query: 421 QISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQ 480
QISGENDQ EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMS+MQKQYYRALLQ
Sbjct: 475 QISGENDQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQ 534
Query: 481 KDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVXXXXX 540
KDLEV+NAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG+HL+ENAGKMV
Sbjct: 535 KDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKL 594
Query: 541 XXXXXXXXSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSE 600
SRVLIFSQMTRLLDILEDYLMY+GYQYCRIDGNTGGEDRDASIEAFNKPGSE
Sbjct: 595 LPKLKERDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSE 654
Query: 601 KFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEY 660
KFVFLLSTRAGGLGINLATADVV+LYDSDWNPQ DLQAQDRAHRIGQKKEVQVFRFCTEY
Sbjct: 655 KFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEY 714
Query: 661 TIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDED 720
TIEEKVIERAYKKLALDALVIQQGRLAEQK VNKD+LLQMVRFGAEMVFSSKDSTITDED
Sbjct: 715 TIEEKVIERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDSTITDED 774
Query: 721 IDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTAELYDFDDDKEENKLDFKKLVSDNWI 780
IDRIIAKGEE TA+LDAKMKKFTEDAIKFKMDDTAELYDFDDDK+ENKLDFKKLV+DNWI
Sbjct: 775 IDRIIAKGEEATAQLDAKMKKFTEDAIKFKMDDTAELYDFDDDKDENKLDFKKLVTDNWI 834
Query: 781 EP-PRRERKRNYSESEYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEV 839
EP RRERKRNYSES+YFKQALRQGAPAKPREPRIPRMPHLHDFQFFN QRLNELYEKEV
Sbjct: 835 EPTSRRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLNELYEKEV 894
Query: 840 RYLMQANQKKDTI-DGEDEDXXXXXXXXXXXXXXXXXXXGFATWTRRDFNTFIRACEKYG 898
+YL+QANQKKDT+ +G+DED GF+TWTRRDFNTFIRACEKYG
Sbjct: 895 KYLVQANQKKDTVGEGDDEDQLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFIRACEKYG 954
Query: 899 RNDIRSIAAEMEGKTEEEVQRYAKVFKERYKELSDYDRIIKNIERGEARISRKDEIMRAI 958
RNDI++I++EMEGKTEEEVQRYAKVF+ERYKEL+DYDR+IKNIE+GEARI RKDEIM+AI
Sbjct: 955 RNDIKNISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRKDEIMKAI 1014
Query: 959 GKKLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFR 1018
GKKLDRYKNPWLELKIQYGQNKGK YNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFR
Sbjct: 1015 GKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFR 1074
Query: 1019 FDWFVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKDKRMAKNMTPTKRSALRVSE 1078
FDWFVKSRTTQELARRC+TLIRLVEKENQEYDE+ER ARKDK KNM+P KRS+ R
Sbjct: 1075 FDWFVKSRTTQELARRCETLIRLVEKENQEYDERERLARKDK---KNMSPAKRSSSRSL- 1130
Query: 1079 GETTPSNSFKRRRQSLMDDYVGSGRRKRG 1107
+T P +S KRRRQS + GSGRR+RG
Sbjct: 1131 -DTPPQSSSKRRRQSYTEANAGSGRRRRG 1158
>Os05g0144300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1128
Score = 462 bits (1190), Expect = e-130, Method: Compositional matrix adjust.
Identities = 244/533 (45%), Positives = 347/533 (65%), Gaps = 19/533 (3%)
Query: 210 DALAGSGGTRLLSQPSCIKG-KMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTIS 268
D+ S ++ QPS ++G ++R YQL GL W++ L+ N +NGILADEMGLGKT+QTI+
Sbjct: 419 DSTVHSIEEKVTEQPSALEGGELRPYQLEGLQWMLSLFNNNLNGILADEMGLGKTIQTIA 478
Query: 269 LLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQP 328
L+ YL E + +TGPH+++APK+ L NW E + + P + + + G P++R +RE
Sbjct: 479 LIAYLLEKKEVTGPHLIIAPKAVLPNWSNEFKTWAPSIGTILYDGRPDDRKALREKNFGQ 538
Query: 329 GKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTM-RIYNTNYRLLIT 387
+F+V +T +++ +K+ LK+ W Y+I+DE HR+KN L++T+ Y RLL+T
Sbjct: 539 RQFNVLLTHYDLILKDLKFLKKVHWHYLIVDEGHRLKNHECALARTLVSRYQIRRRLLLT 598
Query: 388 GTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQIS-----GENDQQE--VVQQLHKVLR 440
GTP+QN+L ELWSLLNF+LP IF+S++ F+EWF ND+++ ++ +LH+VLR
Sbjct: 599 GTPIQNSLQELWSLLNFILPNIFNSSQNFEEWFNAPFACEVSLNDEEQLLIIHRLHQVLR 658
Query: 441 PFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLNIAM 500
PFLLRR K +VEK LP K + ILK MS QK YY + + +G + K L N++M
Sbjct: 659 PFLLRRKKDEVEKYLPVKTQVILKCDMSAWQKAYYEQVTSNGRVSLGSGLKSKALQNLSM 718
Query: 501 QLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVXXXXXXXXXXXXXSRVLIFSQMTRL 560
QLRKCCNHPYLF E Y E +V ++GK RVL+FSQMT+L
Sbjct: 719 QLRKCCNHPYLF--VEHYNMYQRQE-IVRSSGKFELLDRLLPKLQRAGHRVLLFSQMTKL 775
Query: 561 LDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATA 620
LDILE YL ++Y R+DG+T E+R + FNK SE F+FLLSTRAGGLG+NL TA
Sbjct: 776 LDILEVYLQMYQFKYMRLDGSTKTEERGRLLADFNKKDSEYFLFLLSTRAGGLGLNLQTA 835
Query: 621 DVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 680
D V+++DSDWNPQ D QA+DRAHRIGQK EV+VF + +IEE++++RA +K+ +DA V
Sbjct: 836 DTVIIFDSDWNPQMDQQAEDRAHRIGQKNEVRVFVLVSVGSIEEEILDRAKQKMGIDAKV 895
Query: 681 IQQGRLAEQKTV-NKDDLLQ-MVRFGAEMVFSSKDSTITDE-DIDRIIAKGEE 730
IQ G T ++ LLQ ++R G SS + I E +I+R+ A+ +E
Sbjct: 896 IQAGLFNTTSTAQDRRALLQEILRRGT----SSLGTDIPSEREINRLAARNDE 944
>Os06g0183800 Similar to Chromatin remodeling factor CHD3 (GYMNOS/PICKLE)
Length = 1335
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 221/513 (43%), Positives = 310/513 (60%), Gaps = 37/513 (7%)
Query: 229 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 288
G + YQL GLN+L + + IL DEMGLGKT+Q+I+ LG L F GPH+VVAP
Sbjct: 259 GTLHPYQLEGLNFLRYSWYHNKRVILGDEMGLGKTIQSIAFLGSL--FVDKLGPHLVVAP 316
Query: 289 KSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIR-----------------------ENL 325
STL NW +E + P + V + G+ R IR E+
Sbjct: 317 LSTLRNWEREFATWAPQMNVVMYFGSAASREIIRKYEFYYPKEKPKKLKKKKSSPSNEDK 376
Query: 326 LQPG-KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRL 384
Q KFDV +TS+EM + T LK W +I+DE HR+KN++S L ++ Y+T +R+
Sbjct: 377 KQSRIKFDVLLTSYEMINMDSTVLKTIEWECMIVDEGHRLKNKDSKLFGQLKEYHTKHRV 436
Query: 385 LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLL 444
L+TGTP+QNNL EL+ L++FL + F S E F+ + +Q + V++LH +L+P LL
Sbjct: 437 LLTGTPVQNNLDELFMLMHFLEGDSFGSIADLQEEFK---DINQDKQVEKLHGMLKPHLL 493
Query: 445 RRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEVINA-GGERKRLLNIAMQLR 503
RR K DV K LPPKKE IL+V ++ QK+YY+A+L K+ EV+ G L+N+ M+LR
Sbjct: 494 RRFKKDVMKELPPKKELILRVELTSKQKEYYKAILTKNYEVLTRRSGGHVSLINVVMELR 553
Query: 504 KCCNHPYLFQGAEPGPPYTTGE---HLVENAGKMVXXXXXXXXXXXXXSRVLIFSQMTRL 560
K C H F EP P + E L+E++GKM RVLI+SQ +
Sbjct: 554 KLCCHA--FMTDEPEEPANSEEALRRLLESSGKMELLDKMMVKLKEQGHRVLIYSQFQHM 611
Query: 561 LDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATA 620
LD+LEDYL YR + Y RIDG GG +R I+ FN S +F FLLSTRAGGLGINLATA
Sbjct: 612 LDLLEDYLSYRKWSYERIDGKIGGAERQIRIDRFNAKNSTRFCFLLSTRAGGLGINLATA 671
Query: 621 DVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALV 680
D V++YDSDWNP ADLQA RAHR+GQ +V ++R + TIEE++++ KK+ L+ LV
Sbjct: 672 DTVIIYDSDWNPHADLQAMARAHRLGQTSKVMIYRLVSRGTIEERMMQLTKKKMVLEHLV 731
Query: 681 IQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKD 713
+ GRL + + +++L ++R G++ +F ++
Sbjct: 732 V--GRLTKGTNIVQEELDDIIRHGSKELFDDEN 762
>Os07g0497000 Similar to Mi-2 autoantigen-like protein (Helicase-like protein)
Length = 622
Score = 359 bits (921), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 199/485 (41%), Positives = 285/485 (58%), Gaps = 34/485 (7%)
Query: 257 EMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPE 316
EMGLGKT+ + L L I P +V+ P ST+ NW+ E + P L V++ G+
Sbjct: 1 EMGLGKTVSACAFLSSLCCEYKINLPCLVLVPLSTMPNWMAEFASWAPHLNVVEYHGSAR 60
Query: 317 ERNHIRENLLQPG------------KFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRI 364
R+ IR+ G KF+V +T++EM + + L+ SW +I+DE HR+
Sbjct: 61 ARSIIRQYEWHEGDASQMGKIKKSHKFNVLLTTYEMVLVDAAYLRSVSWEVLIVDEGHRL 120
Query: 365 KNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISG 424
KN +S L + + +R+L+TGTPLQNN+ E+++LLNFL P F S +F+E F
Sbjct: 121 KNSSSKLFSLLNTLSFQHRVLLTGTPLQNNIGEMYNLLNFLQPASFPSLASFEEKF---- 176
Query: 425 END--QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKD 482
ND E V++L ++ P +LRRLK D + +PPK E ++ V ++ +Q +YYRA+L K+
Sbjct: 177 -NDLTTTEKVEELKNLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKN 235
Query: 483 LEV---INAGGERKRLLNIAMQLRKCCNHPYLFQGAEP--GPPYTTGEHLVENAGKMVXX 537
+V I GG + LLNI MQLRK CNHPYL G EP G P E ++ + K+
Sbjct: 236 YQVLRNIGKGGAHQSLLNIVMQLRKVCNHPYLIPGTEPESGSPEFLHEMRIKASAKLTLL 295
Query: 538 XXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMYR--GYQYCRIDGNTGGEDRDASIEAFN 595
RVLIFSQMT+LLDILEDYL + + R+DG+ +R A+I FN
Sbjct: 296 HSMLKILHKDGHRVLIFSQMTKLLDILEDYLTWEFGPKTFERVDGSVSVAERQAAIARFN 355
Query: 596 KPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFR 655
+ S +FVFLLSTR+ GLGINLATAD V++YDSD+NP AD+QA +RAHRIGQ + V+R
Sbjct: 356 QDKS-RFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYR 414
Query: 656 FCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDST 715
++EE+++ A KKL LD L + + QK V ++R+G E +F + D
Sbjct: 415 LVVRASVEERILHLAKKKLMLDQLFVNKSE--SQKEVE-----DIIRWGTEELFRNSDVA 467
Query: 716 ITDED 720
+ D +
Sbjct: 468 VKDNN 472
>Os01g0881000 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1150
Score = 349 bits (895), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 197/501 (39%), Positives = 298/501 (59%), Gaps = 20/501 (3%)
Query: 229 GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAP 288
G + DYQL GL WLI ++ + ILADEMGLGKT+Q + L ++ + P +++AP
Sbjct: 532 GALYDYQLQGLQWLIDNFKTRRSVILADEMGLGKTVQVVCFLYHIIKESLTASPALILAP 591
Query: 289 KSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIR--ENLLQPGK--FDVCVTSFEMAIKE 344
KS L W KE ++ L + + G+ + R I+ E GK FD VTS+E +
Sbjct: 592 KSILLQWEKEFCQWASDLNVIVYQGDRDSRKCIQVHEMYSSDGKPLFDALVTSYEFVQID 651
Query: 345 KTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNF 404
K L++F W I+IDEAHR+K + L+ ++ Y + +RLL+TGTPLQNN+ EL+SLL++
Sbjct: 652 KAVLQKFKWSTIVIDEAHRMKKLDCNLAACLKRYCSEFRLLLTGTPLQNNIMELFSLLHY 711
Query: 405 LLPEIFSSAETFDEWFQISGEND--QQEVVQQLHKVLRPFLLRRLKSDV-EKGLPPKKET 461
+ P+ FS + + I D E V ++H +L+P +LRR+KSDV +P KK
Sbjct: 712 IDPDEFSDPKADGLFSPIESGRDLTMDEKVARIHNILKPRMLRRMKSDVLTDSMPVKKWV 771
Query: 462 ILKVGMSQMQKQYYRALLQKDLEVINAG---GERKRLLNIAMQLRKCCNHPYLFQGAEPG 518
+ ++ Q++ Y +L+++ +N+ G + L NI M+LRKCCNHP G E G
Sbjct: 772 EVPCALADSQRELYINILERNYSKLNSAIRNGRKLSLNNILMELRKCCNHPV---GLEVG 828
Query: 519 PPYTTGE--HLVENAGKMVXXXXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMYRGYQYC 576
T L+ ++GK+ +RVLIFSQMTR+LDILED+L GY+Y
Sbjct: 829 QQATEDVFLSLIASSGKLQLLHKLLPRLKERGNRVLIFSQMTRMLDILEDFLCSLGYKYA 888
Query: 577 RIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADL 636
RIDG T R SIE + SE F+FL+STRAGG+G++L AD V++YD D+NP DL
Sbjct: 889 RIDGQTSLSARQESIEEYKNIDSETFIFLMSTRAGGMGVDLPGADRVIIYDPDFNPFMDL 948
Query: 637 QAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDD 696
QAQ RAHRIGQ + V V++ T+ ++EEK+++++ +KLA++ +++ K + D+
Sbjct: 949 QAQSRAHRIGQTRPVVVYQLITKCSVEEKILQKSKQKLAIENMLMNSS-----KKPSADE 1003
Query: 697 LLQMVRFGAEMVFSSKDSTIT 717
L ++ GA+ + K S +
Sbjct: 1004 LQSILLHGAKTIVDRKISATS 1024
>Os03g0101700 Similar to SNF2P
Length = 842
Score = 339 bits (870), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 207/563 (36%), Positives = 314/563 (55%), Gaps = 53/563 (9%)
Query: 257 EMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPE 316
+MGLGKTLQ ISLL YL GP +V+ P S W+ E +FCP LR ++++G+
Sbjct: 16 QMGLGKTLQAISLLSYLKIHSISPGPFLVLCPLSVTDGWLSEFNKFCPSLRVIQYVGDKL 75
Query: 317 ERNHIRENLLQPGK------------FDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRI 364
R +R + Q + FDV +T++++A+ ++ L + W Y++IDEA R+
Sbjct: 76 HRRDLRRMMFQDVQKSSSSSHSTELPFDVMMTTYDIALMDQEFLSQIPWHYVVIDEAQRL 135
Query: 365 KNENSLLSKTM-RIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQIS 423
KN +S+L + + + RLL+TGTP+QNNL ELW+L++F +P IF + + F F+ S
Sbjct: 136 KNPSSVLYNVLEQRFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGTLDQFLSTFKQS 195
Query: 424 GE-------NDQQEVVQQLHKVLRPFLLRRLKSD-VEKG---LPPKKETILKVGMSQMQK 472
G+ N + + L VLR F+LRR K+ ++ G LP E + V ++ +QK
Sbjct: 196 GDSLTGGETNKTDKQFKILKHVLRAFMLRRTKALLIQSGILALPSLTELTVMVPLTPLQK 255
Query: 473 QYYRALLQKDLEVI--NAGG--ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLV 528
+ Y ++L+K+L+ + GG + L NI +QLRK +HPYLF G EP PY GEHLV
Sbjct: 256 KLYLSVLRKELQTLLTFTGGLSRHQSLQNIVIQLRKASSHPYLFSGIEP-EPYVEGEHLV 314
Query: 529 ENAGKMVXXXXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588
+ +GK+V RVL+F+QMT+ LDIL+D+L R Y Y R+DG+ E+R
Sbjct: 315 QASGKLVMLDLILKKLHEVGHRVLLFAQMTQTLDILQDFLELRQYTYERLDGSVRAEERF 374
Query: 589 ASIEAFN-KPG---------SEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQA 638
A+I++F+ +P S FVF++STRAGG+G+NL AD V+ Y+ DWNPQAD QA
Sbjct: 375 AAIKSFSSQPTKGVVRDDNQSGAFVFMISTRAGGVGLNLIGADTVIFYEQDWNPQADKQA 434
Query: 639 QDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVI--QQGRLAEQKTV-NKD 695
RAHRIGQ V ++ TIEE ++ RA +KL L VI + + K V N+
Sbjct: 435 LQRAHRIGQLNNVLSINLVSQRTIEEVIMRRAERKLKLSHSVIGEEDATYGKGKYVENEA 494
Query: 696 DLLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAELDAKMKKFTEDAIKFKMDDTA 755
++ + FG + F + D+T + D E E K+K +E + + + +
Sbjct: 495 SDMRSIIFGLHL-FDTSDTTAETMNDD---TASETIKEETMLKLKSMSEKVVLMRSHEPS 550
Query: 756 ELYDFDDDKEENKLDFKKLVSDN 778
E K+E + ++DN
Sbjct: 551 E-------KDERAFEINPNMTDN 566
>Os01g0102800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1187
Score = 267 bits (682), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/502 (34%), Positives = 251/502 (50%), Gaps = 60/502 (11%)
Query: 216 GGTRLLSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHE 275
GG R+ P + ++ DYQ G+ WL L+ GI+ DEMGLGKT+Q +S LG LH
Sbjct: 360 GGLRI---PGTLYTQLFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTVQVLSFLGSLHN 416
Query: 276 FRGITGPHMVVAPKSTLGNWIKEIQRFCPILR---------------------------- 307
G+ P +VV P + L W +E R+ P +
Sbjct: 417 -SGLYKPSIVVCPVTLLQQWRREASRWYPKFKVEILHDSANSSSKKSKRSSDSDSEASWD 475
Query: 308 -----AVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAH 362
AV ++ + + ++ G + +T++E L W Y ++DE H
Sbjct: 476 SDQEEAVTCSKPAKKWDDLISRVVSSGS-GLLLTTYEQLRILGEKLLDIEWGYAVLDEGH 534
Query: 363 RIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQI 422
RI+N N+ ++ + T +R+++TG P+QN L ELWSL +F+ P F+ F +
Sbjct: 535 RIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAEFSV 594
Query: 423 --------SGENDQQEVVQQLHKVLR----PFLLRRLKSDVEKGLPPKKETILKVGMSQM 470
+ Q + VLR P+LLRR+K+DV LP K E +L ++
Sbjct: 595 PITVGGYANATPLQVSTAYRCAVVLRDLVMPYLLRRMKADVNAQLPKKTEHVLFCSLTTE 654
Query: 471 QKQYYRALL-QKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQ--GAEPGPPYTTGEHL 527
Q+ YRA L ++E I G R L I + LRK CNHP L + A P Y E
Sbjct: 655 QRATYRAFLASSEVEQI-FDGNRNSLYGIDV-LRKICNHPDLLEREHAAQNPDYGNPER- 711
Query: 528 VENAGKMVXXXXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDR 587
+GKM RVL+F+Q ++LDI+E++L YQY R+DG T + R
Sbjct: 712 ---SGKMKVVEQVLKVWKEQGHRVLLFTQTQQMLDIMENFLTACEYQYRRMDGLTPAKQR 768
Query: 588 DASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQ 647
A I+ FN E F+F+L+T+ GGLG NL A+ +++YD DWNP D+QA++RA RIGQ
Sbjct: 769 MALIDEFNN-TDEIFIFILTTKVGGLGTNLTGANRIIIYDPDWNPSTDMQARERAWRIGQ 827
Query: 648 KKEVQVFRFCTEYTIEEKVIER 669
++V V+R T TIEEKV R
Sbjct: 828 TRDVTVYRLITRGTIEEKVYHR 849
>AK111184
Length = 1028
Score = 193 bits (491), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 151/517 (29%), Positives = 247/517 (47%), Gaps = 57/517 (11%)
Query: 231 MRDYQLAGLNWLIRLY-------ENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPH 283
+R +Q+ G+ +L E G ILAD+MGLGKTLQTI+L+ L + P
Sbjct: 324 LRPHQIEGVKFLYERVMGMHADGEKGQGAILADKMGLGKTLQTIALVLTLLKQSCYYTPA 383
Query: 284 -------MVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERN-HIRENLLQPGKFDVCV 335
++V P + + NW +E +++ A+ L E R ++ + V V
Sbjct: 384 SCTIERAIIVCPLTLVKNWKREFKKWIGT-SALNVLCIDEGRGCQDVARFVRSKSYHVLV 442
Query: 336 TSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNL 395
+E K K I+ DE HR+K++ + ++ + +++++GTP+QN+L
Sbjct: 443 IGYEKLRTCKDLFKDAPVGLIVCDEGHRLKSKEAKTTQMFDELSAERKIILSGTPIQNDL 502
Query: 396 HELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHK---------------VLR 440
E +++++F+ P + +S +F +IS E + Q K +
Sbjct: 503 SEFFAMIDFVAPGMLNSYASFK---KISEEPIMRSRAQHCSKHTKATGQARASALMTITN 559
Query: 441 PFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALL-QKDLEVINAGGERKRLLNIA 499
+LRR + LPPKKE +L S Q + Y+++L D+ + G LL I
Sbjct: 560 DIILRRTADILSNFLPPKKEMVLFCSPSPEQIRIYQSILASNDVRSLLRGDAGNGLLQIG 619
Query: 500 MQLRKCCNHPYLFQGAEPGPPYTTGEHLVEN----------------AGKMVXXXXXXXX 543
+ LRK CN P L + + LV + +GK+V
Sbjct: 620 V-LRKLCNTPELLLRDSEADGTSAIKALVGDMARYFPPNFVRNDARFSGKLVCVMQLLEK 678
Query: 544 X-XXXXSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEK- 601
+V++ S T LDI+E + + Y Y R+DG T ++R + FN+ G +
Sbjct: 679 LRAETDDKVVLVSNFTSTLDIVEAMMRKKRYSYLRLDGKTPQDERMDMVNQFNRDGVDSS 738
Query: 602 FVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYT 661
FVFLLS ++GG+G+NL A+ +VL DSDWNP DLQA R HR GQKK ++R T
Sbjct: 739 FVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKVCYIYRLLLSGT 798
Query: 662 IEEKVIERAYKKLAL-DALVIQQGRLAEQKTVNKDDL 697
++EK+ +R KL L D+L+ +G + T ++++L
Sbjct: 799 MDEKIYQRQISKLGLTDSLI--KGDKSSSDTFSQEEL 833
>Os07g0660200 Similar to Chromodomain-helicase-DNA-binding protein, CHD-1-related
Length = 604
Score = 184 bits (466), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 132/194 (68%), Gaps = 22/194 (11%)
Query: 557 MTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGIN 616
M R+LDIL +YL RG+Q+ R+DG+T + R ++E FN PGS+ F FLLSTRAGGLGIN
Sbjct: 1 MVRMLDILAEYLSLRGFQFQRLDGSTRADLRHQAMEHFNAPGSDDFCFLLSTRAGGLGIN 60
Query: 617 LATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLAL 676
LATAD V+++DSDWNPQ DLQA RAHRIGQ++ V ++RF T ++EE ++ERA KK+ L
Sbjct: 61 LATADTVIIFDSDWNPQNDLQAMSRAHRIGQQETVNIYRFVTCKSVEEDILERAKKKMVL 120
Query: 677 DALVIQ----QGRLAEQKT------VNKDDLLQMVRFGAEMVFSSKDSTITDE------- 719
D LVIQ +GRL ++++ +K++L ++RFGAE +F TDE
Sbjct: 121 DHLVIQKLNAEGRLEKKESKKGGSMFDKNELSAILRFGAEELFKEDK---TDEETKKKLE 177
Query: 720 --DIDRIIAKGEET 731
DID I+ + E+
Sbjct: 178 SMDIDEILERAEKV 191
>Os04g0566100 Similar to Transcriptional activator SRCAP
Length = 914
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 167/314 (53%), Gaps = 36/314 (11%)
Query: 231 MRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPK 289
++ YQL G+N+L+ L+ I G ILADEMGLGKT+Q ++ L L GPH++V P
Sbjct: 325 LKPYQLVGVNFLLLLHRKNIGGAILADEMGLGKTVQAVTYLTLLRHLYNDPGPHLIVCPA 384
Query: 290 STLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGK---------FDVCVTSFE- 339
S L NW +E++++CP + F G R + L GK VC + FE
Sbjct: 385 SVLENWERELKKWCPSFSIIMFHG--AGRTAYSKELSSLGKAGYPPPFNVLLVCYSLFER 442
Query: 340 ---MAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIY--NTNYRLLITGTPLQNN 394
++ LKR+ W +++DEAH +K++ S + + + RL++TGTPLQN+
Sbjct: 443 RSAQQKDDRKALKRWRWSCVLMDEAHVLKDKGSFRWRNLMAVAQHARQRLMLTGTPLQND 502
Query: 395 LHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG 454
LHELWSLL F++P+IF++ + D ++ E+ E++ ++ +L PF+LRRLKSDV +
Sbjct: 503 LHELWSLLEFMMPDIFATGD-IDLKKLLNAED--HELISRIKSILGPFILRRLKSDVMQQ 559
Query: 455 LPPKKETILKVGMSQMQKQYYRALLQKDLEVINAGGE---------------RKRLLNIA 499
L PK + + V M Q Q Y + + A ++++ N
Sbjct: 560 LVPKIQHVNFVTMDSEQFQAYNYAIDEYRGACQARSAKSTSNFSNNVVGLIPKRQISNYF 619
Query: 500 MQLRKCCNHPYLFQ 513
MQ RK NHP L +
Sbjct: 620 MQFRKIANHPLLIR 633
>Os02g0762800 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 879
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/460 (30%), Positives = 218/460 (47%), Gaps = 61/460 (13%)
Query: 231 MRDYQLAGLNWLIR-----LYENGING-ILADEMGLGKTLQTISLLGYLHEFRGITGPHM 284
+R +Q G+ ++ L ++GI+G ILAD+MGLGKTLQ+I+LL Y +G M
Sbjct: 235 LRPHQREGVQFMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLL-YTLLCQGFDAKPM 293
Query: 285 V-----VAPKSTLGNWIKEIQR----------FCPILRAVKFLGNPEERNHIRENLLQP- 328
V V P S + NW EI + C RA G E+ L+P
Sbjct: 294 VKRAVVVTPTSLVSNWESEIIKWLKGRVQLLALCESTRADVLSG--------IESFLKPL 345
Query: 329 GKFDVCVTSFEMAIKEKTTLKR-FSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLIT 387
+ V + S+E + +R S +I DEAHR+KN+ +L +K + R+L++
Sbjct: 346 SRLQVLIVSYETFRMHSSKFERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLS 405
Query: 388 GTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQ---ISG---------ENDQQEVVQQL 435
GTP+QN+L E +S++NF P + A F +++ I G +N E +L
Sbjct: 406 GTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAEL 465
Query: 436 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQ-KDLE-VINAGGERK 493
+ F+LRR + + LPPK ++ ++ +Q Y + K+++ +I+ G ++
Sbjct: 466 SAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS 525
Query: 494 RLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVXXXXXXXXXXXXXSRVLI 553
++L L+K CNHP L Y T + N+G S
Sbjct: 526 KVLAYITALKKLCNHPKLI--------YDTIKS--NNSGGSGFDDCLRFFPPELFSGRSG 575
Query: 554 FSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGL 613
F LD+ R Y Y R+DG T R + FN P ++FVFLLS++AGG
Sbjct: 576 FVT----LDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGC 631
Query: 614 GINLATADVVVLYDSDWNPQADLQA-QDRAHRIGQKKEVQ 652
G+NL + ++L+D DWNP D Q Q + + G +K +Q
Sbjct: 632 GLNLVGGNRLILFDPDWNPANDKQVYQRQMSKEGLQKVIQ 671
>Os02g0689800 DEAD/DEAH box helicase domain containing protein
Length = 1059
Score = 161 bits (407), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 101/135 (74%), Gaps = 1/135 (0%)
Query: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 609
R LIF+QMT++LDILE+++ GY Y R+DG+T E+R ++ FN + F+F+LSTR
Sbjct: 112 RALIFTQMTKMLDILEEFINLYGYTYLRLDGSTQPEERQTLMQRFNT-NPKFFLFILSTR 170
Query: 610 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 669
+GG+GINL AD V+ YDSDWNP D QAQDR HRIGQ +EV ++R +E TIEE ++++
Sbjct: 171 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 230
Query: 670 AYKKLALDALVIQQG 684
A +K ALD LVIQ+G
Sbjct: 231 ANQKRALDDLVIQRG 245
>Os07g0636200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 747
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/476 (25%), Positives = 220/476 (46%), Gaps = 56/476 (11%)
Query: 224 PSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPH 283
P+ ++ K+ +Q G+ + + ++G ++ADEMGLGKTLQ I++ LH+ P
Sbjct: 249 PTDVESKLMPFQREGVRFAL---QHGARTLIADEMGLGKTLQAIAVASCLHD----AWPV 301
Query: 284 MVVAPKSTLGNWIKEIQRFC-----PILRAVKFLGNPEERNHIRENLLQPGKFDV----C 334
+V++P S +W IQ + IL + G + + G F++
Sbjct: 302 LVISPSSLRLHWASMIQHWLNIPTEDILVVLPQTGGSNKAGYRLVYSNTKGDFNLDGVFN 361
Query: 335 VTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMR----IYNTNYRLLITGTP 390
V S+++ K K L ++ +I DE+H +KN + +TM + Y +L++GTP
Sbjct: 362 VISYDVVPKIKDMLLDLDFKIVIADESHFLKNAQA--KRTMHSLPVLQKAKYVVLLSGTP 419
Query: 391 LQNNLHELWSLLNFLLPEIFSSAETFDE------WFQI-SGENDQQEVVQQLHKVLRP-F 442
+ EL++ L L P ++ + + +F + G ++ +E LH +++
Sbjct: 420 ALSRPIELFTQLQALYPTVYKNVNEYGNRYCKGGFFGLYQGASNHEE----LHNLMKATV 475
Query: 443 LLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQKDLEV----INAGGERKRLLNI 498
++RRLK DV LP K+ + +S+ + ++ RAL +LE I + ++ + ++
Sbjct: 476 MIRRLKKDVLSQLPVKRRQQAFLDLSEKEMRHIRALFH-ELETVKIKIQSCDSQETMDSL 534
Query: 499 AMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVXXXXXXXXXXXXXSRVLIFSQMT 558
+ N Y AE P +++ G ++ + LIF+
Sbjct: 535 KFAQKNLINKIY-NDSAEAKIPA-----VLDYLGTII----------EAECKFLIFAHHQ 578
Query: 559 RLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLA 618
+L+ + +L+ + + RIDG T R + F K +LS +AGG+G+ L
Sbjct: 579 SMLEAIHQHLLKKKVKCIRIDGQTPVPVRQTLVTDFQNKDDIK-AAVLSIKAGGVGLTLT 637
Query: 619 TADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKL 674
A V+ + W P +QA+DRAHRIGQ V ++ T+++ + + KL
Sbjct: 638 AASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIYYLLANDTVDDIIWDVVQGKL 693
>Os05g0247900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 856
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 113/209 (54%), Gaps = 5/209 (2%)
Query: 529 ENAGKMVXXXXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRD 588
E+ GKM ++L+FS R+LDILE +L+ +GY + R DG T R
Sbjct: 517 EHCGKMRALERLLSLWTLQGDKILLFSYSVRMLDILEKFLIRKGYCFSRFDGTTPMNARQ 576
Query: 589 ASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQK 648
I+ FN+ S++ VFL+STRAG LG+NL +A+ VV++D WNP DLQAQDR+ R GQ+
Sbjct: 577 LLIDEFNRCPSKQ-VFLISTRAGNLGVNLVSANRVVIFDPSWNPAQDLQAQDRSFRFGQR 635
Query: 649 KEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQ--KTVNKDDLLQMVRFGAE 706
+ V VFR ++EE + R K L + + G++ ++ + V D Q FG
Sbjct: 636 RHVTVFRLLGAGSLEELIYSRQIYKQQLSNIAV-SGKIEKRYFEGVQDDKKFQGELFGIC 694
Query: 707 MVFSS-KDSTITDEDIDRIIAKGEETTAE 734
+F D T E I+ G+ TAE
Sbjct: 695 NLFRDLSDKLFTSEIIEMHGEHGKGNTAE 723
Score = 119 bits (298), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 148/301 (49%), Gaps = 30/301 (9%)
Query: 211 ALAGSGGTRLLSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 270
AL+ G ++ PS I ++ +Q G+ +L LY N G+L D+MGLGKT+QTI+ L
Sbjct: 112 ALSPPGERPVVQVPSSINCRLLVHQRDGVRFLYNLYRNNHGGVLGDDMGLGKTIQTIAFL 171
Query: 271 GY-----------LHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERN 319
L E R I P +++ P S + NW E + AV N R+
Sbjct: 172 SAVIGKDNDHGDQLVEGRKI-APILILCPTSVIRNWENEFAEWARCSVAVYHGPN---RD 227
Query: 320 HIRENLLQPGKFDVCVTSFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYN 379
+ + + + + ++ +TSF+ L SW +++DEAHR+KNE S L
Sbjct: 228 LVLQKV-ETQRLEIVITSFDTFRIHGKILCGISWDLVVVDEAHRLKNEKSKLYTACLEIT 286
Query: 380 TNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQ-----QEVVQ- 433
T R +TGT +QN + EL++L ++++P E F ++ ++ Q + VQ
Sbjct: 287 TRKRFGLTGTIMQNKIMELFNLFDWIVPGCLGDREHFRVYYDEPLKHGQRFSAPERFVQV 346
Query: 434 ------QLHKVLRPFLLRRLKSDVEKGLPPKKE-TILKVGMSQMQKQYYRALLQK-DLEV 485
L VL FLLRR K + L KE I+ MS +QK+ YR +LQ+ D+++
Sbjct: 347 ADKRKKHLVSVLSKFLLRRTKEETIGHLMLGKEDNIVFCRMSDVQKRVYRRMLQQPDVQI 406
Query: 486 I 486
+
Sbjct: 407 L 407
>Os04g0177300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 664
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 143/301 (47%), Gaps = 45/301 (14%)
Query: 251 NGILADEMGLGKTLQTISLLGYLHEFRG----------------------ITGPHMVVAP 288
GILAD MGLGKT+ TI+L+ L RG + G +++ P
Sbjct: 78 GGILADAMGLGKTVMTIALI--LSNPRGELEQDKRGTRDRDTKAQTSRSSVRGGTLIICP 135
Query: 289 KSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSF---EMAIKE- 344
+ LG W E++ F+ +R +L + V +T++ + A K
Sbjct: 136 MALLGQWKDELEAHSTPGALSVFVYYGGDRT---TDLRFMAQHSVVLTTYGVLQSAHKND 192
Query: 345 -KTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLN 403
+ R W +++DEAH IK+ + ++ ++ R +TGTPLQNNL +L+SLL
Sbjct: 193 GSSIFHRIDWYRVVLDEAHTIKSPRTKAARAAYELTSHCRWCLTGTPLQNNLEDLFSLLC 252
Query: 404 FLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG------LPP 457
FL E + A +++ Q EN + ++ + +LRP +LRR K +K LPP
Sbjct: 253 FLHVEPWGDASWWNKLIQRPYENGDERGLKLVRAILRPLMLRRTKETKDKMGNPILVLPP 312
Query: 458 KKETILKVGMSQMQKQYYRALLQKD---LEVINAGGE----RKRLLNIAMQLRKCCNHPY 510
I++ S+ ++ +Y AL ++ + A G +L + ++LR+CC+HP+
Sbjct: 313 ANIEIVECEQSEDERDFYEALFRRSKVQFDKFVAQGSVLNNYANILELLLRLRQCCDHPF 372
Query: 511 L 511
L
Sbjct: 373 L 373
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Query: 552 LIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAG 611
++FSQ T D+LE +G ++ R DG + R+ ++ F++ +K V L+S +AG
Sbjct: 518 IVFSQFTSFFDLLEVPFNQKGIKFLRFDGKLSQKHREKVLKEFSE-SKDKLVLLMSLKAG 576
Query: 612 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKV 666
G+G+NL A V L D WNP + QA R HRIGQK+ VQV RF + T+EE++
Sbjct: 577 GVGLNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRAVQVRRFIVKDTVEERM 631
>Os10g0457700 Zinc finger, FYVE/PHD-type domain containing protein
Length = 1319
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 531 AGKMVXXXXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMY------------RGYQYCRI 578
+GKMV + L+FSQ LD++E YL +G + RI
Sbjct: 1115 SGKMVLLLDILSSCSELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRI 1174
Query: 579 DGNTGGEDRDASIEAFNKPGSEKF-VFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQ 637
DG+T +R +E FN P + + L+STRAG +GINL +A+ V+L D WNP DLQ
Sbjct: 1175 DGSTPSSERQNLVERFNDPENIRVKCTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQ 1234
Query: 638 AQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDL 697
A R R GQ K V +R T+EEK+ +R K L A V+ + +++ +T++K+++
Sbjct: 1235 AIYRVWRYGQTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVDRQQVS--RTISKEEM 1292
Query: 698 LQMVRFGAEMVFSSKDSTI 716
L + FG E + ST+
Sbjct: 1293 LHLFEFGDEELLEQSGSTM 1311
Score = 103 bits (256), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 153/340 (45%), Gaps = 52/340 (15%)
Query: 224 PSCIKGKMRDYQLAGLNWL----------IRLYENGINGILADEMGLGKTLQTISLLGYL 273
PS I K++ +Q++G+ ++ ++ + G ILA MGLGKT Q I+ L +
Sbjct: 708 PSSISAKLKPHQVSGIRFMWENVIQSVKKVKSGDKGFGCILAHNMGLGKTFQVITFLYTV 767
Query: 274 HEFRGIT---GPHMVVAPKSTLGNWIKEIQRFCPI----LRAVKFLGNPEERNHIRENL- 325
R I ++V P + L NW KE ++CP LR P R +I+ L
Sbjct: 768 --MRCIQLGLRTALIVTPVNVLHNWKKEFIKWCPAESKPLRVYMLEDVP--RANIQYLLK 823
Query: 326 ---LQPGKFDVCVTSF-----------EMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLL 371
++ G + +SF + E T + ++ DEAH IKN +
Sbjct: 824 KWRIKGGVLLIGYSSFRNLSLGRSARDKTVANEITNALQCGPDILVCDEAHIIKNRRADT 883
Query: 372 SKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQ-- 429
++ ++ T R+ +TG+PLQNNL E + +++F+ S+ F FQ EN Q
Sbjct: 884 TQALKQVRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTN 943
Query: 430 ------EVVQQ----LHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALL 479
+++ Q L++ L+ F+ R + V+ LP KK ++ V +SQ+Q++ YR L
Sbjct: 944 STSDDVKIMNQRSHILYEQLKGFVQRMDMNVVKNDLPEKKVFVVTVKLSQLQRKLYRRFL 1003
Query: 480 QKDLEVINAGGE----RKRLLNIAMQLRKCCNHPYLFQGA 515
+ +A E R L NHP L Q A
Sbjct: 1004 DVNGFSSSAASEKSFQRSGFFAKYQTLALIWNHPGLLQMA 1043
>Os02g0650800
Length = 1439
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 158/350 (45%), Gaps = 31/350 (8%)
Query: 356 IIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI------ 409
+++DE H +N+ SL+ K + T R++++GTP QN+ EL ++L + P+
Sbjct: 1059 LVLDEGHTPRNKKSLIWKVLEEVRTKKRIILSGTPFQNSFLELSNVLYLIRPKFARHFAS 1118
Query: 410 --FSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGM 467
F D W ++ N ++ + ++ ++L P + ++K LP +E+++ +
Sbjct: 1119 KSFKKIGLEDYWTSLTLNNITEKKIDEIRQILDPIVHIHNGDILQKSLPGLRESVVILNP 1178
Query: 468 SQMQKQYYRALLQKDLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG--- 524
QK+ A+ + G L+ ++ HP+L A+ T+
Sbjct: 1179 LPHQKEIITAMEN----TVTMG-----TLDAEYKISLASIHPFLVTCAKLSEKETSSVDV 1229
Query: 525 ---EHLVENAGKMVXXXXXXXXXXXXXS---RVLIFSQMTRLLDILEDYL--MY---RGY 573
+ L N V + RVL+FSQ L ++ D L M+ G
Sbjct: 1230 SLLKSLRPNPCVGVKTKFVLEIVRLCEAMKERVLVFSQYLEPLSLIMDQLSKMFNWIEGE 1289
Query: 574 QYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQ 633
+ + GN ++R+A +EAFN S V L ST+A GI L A VVL D WNP
Sbjct: 1290 EILLMSGNVLVQNREALMEAFNDMKSNAKVMLASTKACCEGITLIGASRVVLLDVVWNPS 1349
Query: 634 ADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQ 683
QA RA+RIGQ+K V + TE T E+ +R KK + L+ +
Sbjct: 1350 VGRQAIGRAYRIGQEKIVYTYNLITEGTKEKDKYDRQAKKDHMSKLLFSK 1399
>Os02g0527100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 810
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 146/331 (44%), Gaps = 78/331 (23%)
Query: 252 GILADEMGLGKTLQTISLL---------------GYLHEFRG------------------ 278
GILAD MGLGKT+ TI+LL E G
Sbjct: 198 GILADAMGLGKTIMTIALLLADSSKGCITTQHSTHICEEASGLGELPVQPHDDVKKLAIP 257
Query: 279 -------------ITGPHMVVAPKSTLGNWIKEIQRFC---PILRAVKFLGN-PEERNHI 321
I G +++V P + LG W EI+ + V + N P+E N I
Sbjct: 258 FSFSKLRKPKTPLIAGGNLIVCPMTLLGQWKAEIEAHATPGSVSIYVHYGQNRPKEANLI 317
Query: 322 RENLLQPGKFDVCVTSFEMAIKEKTT--------LKRFSWRYIIIDEAHRIKNENSLLSK 373
G+ D+ +T++ + E + L W +++DEAH IK+ SL+S
Sbjct: 318 -------GQSDIVLTTYGVLSSEFSNENSTESGGLYSIHWFRVVLDEAHMIKSPKSLISL 370
Query: 374 TMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQISGENDQQEVVQ 433
+ R +TGTP+QNNL +++SL FL E + + + + Q E + ++
Sbjct: 371 AAAALTADRRWCLTGTPIQNNLEDIYSLFRFLRVEPWRNWSLWHKLVQKPYEEGDERGLK 430
Query: 434 QLHKVLRPFLLRRLKSDVEKG------LPPKKETILKVGMSQMQKQYYRALLQKDLEVIN 487
+ +L+P +LRR K+ +K LPP + +S+ +K +Y AL ++ +
Sbjct: 431 LVQSILKPIMLRRNKNSTDKEGRPILILPPANIEVKYCDLSETEKDFYDALFRRSKVKFD 490
Query: 488 AGGERKRLLN-------IAMQLRKCCNHPYL 511
E+ R+L+ + ++LR+CC+HP+L
Sbjct: 491 QFVEQGRVLHNYASILELLLRLRQCCDHPFL 521
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
Query: 549 SRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLST 608
++ +IFSQ T LD+L+ L + + R+DG + R+ I+ F++ S V L+S
Sbjct: 661 AKSIIFSQWTAFLDLLQIPLSRHNFSFARLDGTLNLQQREKVIKEFSEDKS-ILVLLMSL 719
Query: 609 RAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKV-- 666
+AGG+GINL A + D WNP + QA R HRIGQ K V + RF + T+EE++
Sbjct: 720 KAGGVGINLTAASNAFVMDPWWNPAVEEQAIMRIHRIGQTKSVSIKRFIVKGTVEERMEA 779
Query: 667 IERAYKKLALDALVIQQGRLA 687
++ +++ AL Q+ R A
Sbjct: 780 VQARKQRMISGALTDQEVRSA 800
>Os05g0392400 SNF2-related domain containing protein
Length = 450
Score = 106 bits (265), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 159/369 (43%), Gaps = 62/369 (16%)
Query: 356 IIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEI------ 409
+++DE H +NE S++ KT+ T R++++GTP QNN EL+++L + P
Sbjct: 31 LVLDEGHTPRNERSVIWKTLGKVKTEKRIILSGTPFQNNFLELYNILCLVRPRFGEMFLT 90
Query: 410 -----------------FSSAETFDEWFQISGENDQQEVVQQLHKVLRPF-------LLR 445
FS W ++ N + +++ +L+PF +LR
Sbjct: 91 KTRVGRRHCVSKKQRDKFSDKYEKGVWASLTS-NVTDDNAEKVRSILKPFVHIHNGTILR 149
Query: 446 RLKS-----DVEKGLPPKKETILKV----GMSQMQKQYYRALLQKDLEVINAGGERKRLL 496
L V K LP +K I KV + + +Y +L ++NA +
Sbjct: 150 TLPGLRECVIVLKPLPLQKSIIRKVENVGSGNNFEHEYVISLASTHPSLVNA-------I 202
Query: 497 NIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLVENAGKMVXXXXXXXXXXXXXSRVLIFSQ 556
N+ + + P L + P V ++ +VLIFSQ
Sbjct: 203 NMTEEEASLIDKPML-ERLRSNPYEGVKTRFVMEVVRLCEALK---------EKVLIFSQ 252
Query: 557 MTRLLDILEDYL--MYR---GYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAG 611
+ L++++++L +++ G + ++DG R SIE FN P S+ V L STRA
Sbjct: 253 FIQPLELIKEHLRKIFKWREGKEILQMDGKILPRYRQNSIEVFNNPDSDARVLLASTRAC 312
Query: 612 GLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAY 671
GI+L A VVL D WNP QA RA RIGQKK V + T T E +R
Sbjct: 313 CEGISLTGASRVVLLDVVWNPAVGRQAISRAFRIGQKKFVYTYNLITYGTGEGDKYDRQA 372
Query: 672 KKLALDALV 680
+K L LV
Sbjct: 373 EKDHLSKLV 381
>Os01g0636700 RNA-binding region RNP-1 (RNA recognition motif) domain containing
protein
Length = 469
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 133/273 (48%), Gaps = 28/273 (10%)
Query: 224 PSCIKGKMRDYQLAGLNWLIRLY-ENGINGILADEMGLGKTLQTISLLGYLHEFRGITGP 282
PS I + +Q GL WL RL+ E GILAD+MGLGKT Q + L L + +T
Sbjct: 199 PSEIFSSLFPHQKDGLEWLWRLHCEKSGGGILADDMGLGKTRQASAFLAGLF-YSDLTQR 257
Query: 283 HMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEM-- 340
++VAP + L WI E+ + + + R+ +L+ G V + ++++
Sbjct: 258 VLIVAPGTILHQWIAELTKVGFNEDLIHSFWCAKTRHDSLAQVLKEG--GVLLITYDLVR 315
Query: 341 -------AIKEKTTLKR---FSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTP 390
+ K++ R SW Y+I+DE H +KN N+ + ++ + +++TGTP
Sbjct: 316 LYNEELNGMSSKSSKMRRACPSWDYVILDEGHVLKNPNTKNAAALKSLSRGQTVVLTGTP 375
Query: 391 LQNNLHELWSLLNFLLPEIFSSAETFDEWF--QISGEN---DQQEVV-------QQLHKV 438
+QNNL E SL++ P + S F+ F I N EVV + K+
Sbjct: 376 VQNNLSEFHSLMSLCCPTVLGSLAAFERDFCKPIDMGNVLEATTEVVMISSKKAMEFRKM 435
Query: 439 LRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQ 471
+RP+ LRR K +E LP K + ++ + ++ Q
Sbjct: 436 VRPYFLRRTKESIESLLPNKADLVIWLKLTPYQ 468
>AK110250
Length = 1046
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 223 QPSCIKGKMRDYQLAGLNWLIRLYENGI--NGILADEMGLGKTLQTISLLGYLHEFRGIT 280
QP+ + K+ +Q GL+W+ R E G G+LADEMG+GKT+Q ISL+
Sbjct: 423 QPAGLNIKLLPFQREGLSWMTR-QEQGTWKGGMLADEMGMGKTIQMISLM-----LSDRK 476
Query: 281 GPHMVVAPKSTLGNWIKEIQRFC-PILRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFE 339
P +VVAP + W EI+++ P L+ + + G + +NL + DV +TS+
Sbjct: 477 KPCLVVAPTVAIMQWRNEIEQYTEPKLKVLLWHGP-----NRTQNLKELKAVDVVLTSYA 531
Query: 340 M-----------------AIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNY 382
+ +KEK+ L WR II+DEAH IK ++ +K ++
Sbjct: 532 VLESSFRKQESGFRRKNEILKEKSALHAVHWRRIILDEAHNIKERSTNTAKGAFALQGDF 591
Query: 383 RLLITGTPLQNNLHELWSLLNFLLPEIFS 411
R ++GTPLQN + EL+S++ FL + F+
Sbjct: 592 RWCLSGTPLQNRVGELYSMIRFLGGDPFA 620
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 1/127 (0%)
Query: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 609
+ L+FSQ LD++ L G+Q CR++GN E R+ +I+ F + VFL+S +
Sbjct: 895 KSLVFSQFVNFLDLIAFRLQRAGFQICRLEGNMSPEARNRTIKHFME-NPNVTVFLVSLK 953
Query: 610 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 669
AGG+ +NL A V L D WNP ++QA DR HR+G+ + + V R E +IE ++IE
Sbjct: 954 AGGVALNLTEASRVYLMDPWWNPSVEVQAMDRIHRLGRHRPIIVKRMVIENSIESRIIEL 1013
Query: 670 AYKKLAL 676
KK A+
Sbjct: 1014 QNKKSAM 1020
>Os07g0642400 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 821
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 549 SRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEK-FVFLLS 607
S+ +IFSQ ++L +LE L G+ R+DG+ + R I F G + V L S
Sbjct: 664 SKSVIFSQFRKMLILLEGPLKAAGFNILRLDGSMTAKKRSEVIRQFGCVGPDSPTVLLAS 723
Query: 608 TRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVI 667
+A G G+NL A V L+D WNP + QA DR HRIGQ KEV+V R + +IEE+++
Sbjct: 724 LKAAGAGVNLTAASTVYLFDPWWNPGVEEQAMDRVHRIGQTKEVKVVRLIVKDSIEERML 783
Query: 668 E 668
E
Sbjct: 784 E 784
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 48/297 (16%)
Query: 251 NGILADEMGLGKTLQTISLLGYLHEFRGITG--------------------PHMVVAPKS 290
GI AD+MGLGKTL +SL+G + R + G +VV P S
Sbjct: 242 GGIFADDMGLGKTLTLLSLIGR-SKARNVGGKKARGAKRRKVEEAVEEESRTTLVVCPPS 300
Query: 291 TLGNWIKEIQRFCPI--LRAVKFLGNPEERNHIRENLLQPGKFDVCVTSFEMAIKE---- 344
+W+ +++ L+ + G ER ++ LL K+D+ +T++ +E
Sbjct: 301 VFSSWVTQLEEHTKTGSLKVYLYHG---ERTKEKKELL---KYDIVITTYSTLGQELEQE 354
Query: 345 KTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNF 404
+ +K W +I+DEAH IKN + +K + N R ++TGTP+QN+ +L+ L+ F
Sbjct: 355 GSPVKEIEWFRVILDEAHVIKNSAARQTKAVIALNAERRWVVTGTPIQNSSFDLYPLMAF 414
Query: 405 LLPEIFSSAETFDEWFQISGENDQQEV-VQQLHKVLRPFLLRRLKSDVEKG------LPP 457
L + FS + Q+ E + + +L +L LRR K + E G +PP
Sbjct: 415 LRFQPFSIKSYWQSLIQLPLERKNNGIGLARLQSLLGAISLRRTK-ETESGSKSLVSIPP 473
Query: 458 KKETILKVGMSQMQKQYYRALLQKDLEVINAGGERKRLLN-------IAMQLRKCCN 507
K + +S +++YY + + + G+R +L ++LR+ CN
Sbjct: 474 KTVLACYIELSAEEREYYDQMELEGKNKLREFGDRDSILRNYSTVLYFILRLRQLCN 530
>Os01g0779400 SWAP/Surp domain containing protein
Length = 1213
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 609
+ ++FSQ TR+LD++E +L Y R+DG RD +++ FN E V ++S +
Sbjct: 1060 KAIVFSQWTRMLDLVEVHLKSSHLSYRRLDGTMSVAARDRAVKDFNT-NPEVSVMIMSLK 1118
Query: 610 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 669
A LG+N+ A V+L D WNP + QA DRAHRIGQ + V V R + T+E++++
Sbjct: 1119 AASLGLNMVAACHVLLLDLWWNPTTEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 1178
Query: 670 AYKKLALDALVIQQGRLAEQKT 691
KK + A + + +T
Sbjct: 1179 QEKKREMVASAFGEDKSGAHQT 1200
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 92/183 (50%), Gaps = 16/183 (8%)
Query: 348 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 407
L + +W +I+DEA IKN + +++ R ++GTP+QN + +L+S FL
Sbjct: 706 LAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRY 765
Query: 408 EIFSSAETFDEWFQISGENDQQEVV--QQLHKVLRPFLLRRLKSDVEKG-----LPPKKE 460
+ ++ + F F I + + ++L VL+ +LRR K+ + G LPPK
Sbjct: 766 DPYAEYKKF--CFMIKTPISRNPITGYKKLQVVLKTVMLRRTKATMLDGKPIISLPPKTV 823
Query: 461 TILKVGMSQMQKQYYRALLQKDLEVIN----AGGERKRLLNI---AMQLRKCCNHPYLFQ 513
++ V + ++ +Y L + E AG ++ +NI ++LR+ C+HP+L +
Sbjct: 824 SLKTVDFTSEERAFYNTLEAESREQFKEYAAAGTVKQNYVNILLMLLRLRQACDHPHLVR 883
Query: 514 GAE 516
G E
Sbjct: 884 GHE 886
>Os08g0180300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1030
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 87/155 (56%), Gaps = 2/155 (1%)
Query: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 609
+ ++FSQ T +LD+LE L QY R+DG RD +++ FN E V ++S +
Sbjct: 877 KAIVFSQWTGMLDLLELSLNSNLIQYRRLDGTMSLNSRDKAVKDFNT-DPEVRVMIMSLK 935
Query: 610 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIER 669
AG LG+N+ A V+L D WNP A+ QA DRAHRIGQ + V V R + T+E++++
Sbjct: 936 AGNLGLNMVAACHVILLDLWWNPYAEDQAIDRAHRIGQTRPVTVSRLTIKDTVEDRILAL 995
Query: 670 AYKKLALDALVIQQGRLAEQKT-VNKDDLLQMVRF 703
+K A+ + + + T + DDL + RF
Sbjct: 996 QEEKRAMVSSAFGEDKSGGHATRLTVDDLKYLFRF 1030
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 90/179 (50%), Gaps = 12/179 (6%)
Query: 348 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 407
+ R W +++DEA IKN + ++K R ++GTP+QN + EL+S +FL
Sbjct: 541 VARVRWFRVVLDEAQTIKNFRTQVAKACCGLRAKRRWCLSGTPIQNAIDELYSYFHFLKY 600
Query: 408 EIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETI 462
+ +S+ +F + + ++L VLR LLRR K + G LPPK +
Sbjct: 601 DPYSTYNSFCTMIKHPIARNAVHGYKKLQTVLRIVLLRRTKETLIDGEPIIKLPPKTINL 660
Query: 463 LKVGMSQMQKQYYRALLQKD---LEVINAGGERKR----LLNIAMQLRKCCNHPYLFQG 514
KV ++ ++ +Y L ++ + A G K+ +L + ++LR+ C+HP L +G
Sbjct: 661 DKVDFTKEERAFYLTLEERSRQQFKAYAAAGTLKQNYANILLMLLRLRQACDHPLLVKG 719
>Os07g0511500 SNF2-related domain containing protein
Length = 635
Score = 91.3 bits (225), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
Query: 552 LIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAF-NKPGSEKFVFLLSTRA 610
++FSQ T LD++E L G + +++G ++ +I+ F N P +FL+S +A
Sbjct: 486 IVFSQFTSFLDLIEFSLQKSGIKCVQLNGKMNIVEKGKAIDTFTNDPDCR--IFLMSLKA 543
Query: 611 GGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERA 670
GG+ +NL A V L D WNP + QAQDR HRIGQ K ++ RF + T+EE++++
Sbjct: 544 GGVALNLTVASHVFLMDPWWNPAVESQAQDRIHRIGQFKPIRSMRFVIKDTVEERILQLQ 603
Query: 671 YKK 673
KK
Sbjct: 604 EKK 606
>Os06g0255700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 946
Score = 90.1 bits (222), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 222/525 (42%), Gaps = 84/525 (16%)
Query: 230 KMRDYQLAGLNWLIR-LYENGING-ILADEMGLGKTLQTISLL-GYLHEFRGITGPHMVV 286
+MR +QL G ++L++ L + G ILA G GKT IS + +L ++ + +VV
Sbjct: 404 QMRPHQLEGFSFLVKNLVGDKPGGCILAHAPGSGKTFMLISFIQSFLAKYP--SARPLVV 461
Query: 287 APKSTLGNWIKEIQRF----CPI-----------LRAVKFLGNPEERNHIRENLLQPGKF 331
PK LG W +E QR+ P+ + ++ L + E + I L +F
Sbjct: 462 LPKGILGTWKREFQRWQVEDIPLYDFYSVKADKRVEQLEVLKSWEAQMSIL--FLGYKQF 519
Query: 332 DVCVT-----SFEMAIKEKTTLKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLI 386
+ + A +++ + +I+DE H +N + + +++ T ++++
Sbjct: 520 SRIICGDGDGNIAAACRDRLLMVP---NLLILDEGHTPRNRETDVLASLKRVQTPRKVVL 576
Query: 387 TGTPLQNNLHELWSLLNFLLPE----------------------IFSSAETFDEWFQISG 424
+GT QN++ E++++L+ + P+ I S D F S
Sbjct: 577 SGTLFQNHVSEVFNILDLVRPKFLKMESSRPIARRIMSQVAISGIRSLKGVHDSAFTESV 636
Query: 425 E----ND-----QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYY 475
E ND + V++ L ++ + +L K D+ LP + + + +S QK+
Sbjct: 637 EDTLLNDDNFTRKAHVIRSLRELTKD-VLHYYKGDILDELPGLVDFSVFLKLSTKQKEI- 694
Query: 476 RALLQKDLEVINAGGERKR-LLNIAMQLRKCCNHPYLFQGAEPGPPYT--TGEHLVE--- 529
+ I A + KR + A+ + C + A+ T T + L+E
Sbjct: 695 -------VHKIEAYEKFKRSAVGTALYIHPCLSEISEGDAADRASNLTDATVDSLIESII 747
Query: 530 --NAGKMVXXXXXXXXXXXXXSRVLIFSQMTRLLDILEDYLMYR-----GYQYCRIDGNT 582
+ K ++L FSQ + LE L+ R G + I G+T
Sbjct: 748 IKDGVKAKFFFNILSLANSAGEKLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDT 807
Query: 583 GGEDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRA 642
+DR+ +++ FN K +F S +A G GI+L A V++ D NP QA RA
Sbjct: 808 SADDREVAMDQFNNSADAKVLFG-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRA 866
Query: 643 HRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLA 687
R GQ+K+V V+R + E K E A+KK + L + L
Sbjct: 867 FRPGQQKKVFVYRLVAADSPEVKFHETAFKKEVIPKLWFEWSELC 911
>Os04g0629300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1051
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Query: 348 LKRFSWRYIIIDEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLP 407
L R W +++DEA IKN N+ +++ R ++GTP+QN + +L+S FL
Sbjct: 560 LARVRWFRVVLDEAQTIKNHNTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFRFLKY 619
Query: 408 EIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKG-----LPPKKETI 462
E +S +F + D ++L VL+ LLRR K + G LPPK +
Sbjct: 620 EPYSVYGSFRSMIKYQISRDATRGYKKLQAVLKIVLLRRTKETLIDGEPIIKLPPKTIQL 679
Query: 463 LKVGMSQMQKQYYRAL----LQKDLEVINAGGERKRLLNI---AMQLRKCCNHPYLFQGA 515
K+ S+ ++ +Y L +K E +AG R+ NI ++LR+ C+HP L +G
Sbjct: 680 SKIDFSKEERTFYMMLEEGSREKFKEYASAGTIRENFANILVLLLRLRQACDHPLLLKGK 739
Query: 516 E 516
E
Sbjct: 740 E 740
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 549 SRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLST 608
S+ ++FSQ T LLD+LE L ++ R+DG R+A++ FN E V L+S
Sbjct: 897 SKAIVFSQWTGLLDLLELSLDSSRIKFRRLDGAMSLNLREAAVREFNT-DPEVRVMLMSL 955
Query: 609 RAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIE 668
+AG LG+N+ A V++ D WNP A+ QA DRAHRIGQ + V V R + T+E++++
Sbjct: 956 KAGNLGLNMVAACHVIMIDPWWNPYAEDQAVDRAHRIGQTRPVTVSRLTIKDTVEDRILA 1015
Query: 669 RAYKK 673
KK
Sbjct: 1016 LQEKK 1020
>Os09g0442700 SNF2-related domain containing protein
Length = 86
Score = 80.1 bits (196), Expect = 9e-15, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 46/61 (75%)
Query: 360 EAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEW 419
+ HR+KN LL + ++ + +LL+TGTPLQNNL ELWSLLNF+LP+IFSS + F+ W
Sbjct: 22 QGHRLKNSKCLLLRELKRLPMDNKLLLTGTPLQNNLAELWSLLNFILPDIFSSHQEFESW 81
Query: 420 F 420
+
Sbjct: 82 Y 82
>Os07g0598300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1158
Score = 73.9 bits (180), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 550 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTR 609
+ +IF+ ++LD ++ ++ + +Y RIDG+T +R ++++F + E V ++
Sbjct: 526 KTIIFAHHLKVLDGVQVFVTEQRIKYVRIDGSTSPRERKDAVDSF-RLNPEVMVAIIGIT 584
Query: 610 AGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEE 664
AGG+G++ ++A VV + + LQA+DRAHR GQ V ++ FC T++E
Sbjct: 585 AGGVGLDFSSAQNVVFVELPKSASELLQAEDRAHRRGQTNAVNIYIFCARNTLDE 639
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 126/267 (47%), Gaps = 37/267 (13%)
Query: 220 LLSQPSCIKGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGI 279
L+ P ++ + +QL G+ + +R + + +ADEMGLGKTLQ I++ +
Sbjct: 179 LMKLPQHLRDALLPFQLEGVKFGLRRHGRCL---IADEMGLGKTLQAIAIACCYKD---- 231
Query: 280 TGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFDVC----V 335
GP ++V P W +E++R+ P FL P++ + + + + C V
Sbjct: 232 EGPVLIVCPAVLRYTWAEELERWDP-----SFL--PKDIHLVFGHQDSLERLGACPKAVV 284
Query: 336 TSFEMAIKEKTTLKRFSWRYIIIDEAHRI-----KNENSLLSKTMRIY-NTNYRLLITGT 389
S++M + + ++ W +IIDE+H I K+E + + + N + +L++GT
Sbjct: 285 ISYQMLSRLRKSMMNRRWALMIIDESHNIRCTKKKHEKNETQAVLELAPNVSRIVLLSGT 344
Query: 390 PLQNNLHELWSLLNFLLPEIFSS-----AETFDEWFQISGEN-------DQQEVVQQLHK 437
P + +++ +N L P + S A + + G N + + +L+
Sbjct: 345 PSLSRPFDIYHQINMLWPHLLGSNKFDFANKYCLLHTVQGCNGRTYQDFSKGARLTELNV 404
Query: 438 VL-RPFLLRRLKSDVEKGLPPKKETIL 463
+L + ++RRLK + LPPK+ I+
Sbjct: 405 LLSQTLMIRRLKEHLLNELPPKRRQII 431
>Os04g0692750 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 204
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 21/160 (13%)
Query: 254 LADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWIKEIQRFCPILRAVKFLG 313
L D+MGLGKT+Q + L L R I +VVAPK+ L +W KE+ + + G
Sbjct: 1 LGDDMGLGKTMQVSAFLAGLFHSRLIKRV-LVVAPKTLLTHWTKELSVVSLKDKIRDYSG 59
Query: 314 -NPEERNH-----IRENLLQPGKFDVCVTSFEMAIK---------EKTTLKRFSWRYIII 358
N RN+ +E + +D+ +F+M IK E+ TL W Y+I+
Sbjct: 60 PNANARNYELKYAFKEGGILLTTYDIVRNNFKM-IKGNFTNDFDDEEETL----WNYVIL 114
Query: 359 DEAHRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHEL 398
DE H IKN + ++++ +R++I+GTP+QNNL EL
Sbjct: 115 DEGHIIKNPKTQRAQSLFEIPCAHRIVISGTPIQNNLKEL 154
>Os07g0434500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 909
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
Query: 550 RVLIFSQMTRLLDILEDYLMYR-----GYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVF 604
++L FSQ + LE L+ R G + I G+T +DR+ +++ FN K +F
Sbjct: 733 KLLAFSQYILPMKFLERLLVKRLGWHVGKEIFMISGDTSADDREVAMDQFNNSADAKVLF 792
Query: 605 LLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEE 664
S +A G GI+L A V++ D NP QA RA R GQ+K+V V+R + E
Sbjct: 793 G-SIKACGEGISLVGASRVIILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVAADSPEV 851
Query: 665 KVIERAYKKLALDAL 679
K E A+KK + L
Sbjct: 852 KFHETAFKKEVIPKL 866
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 31,420,915
Number of extensions: 1285213
Number of successful extensions: 4008
Number of sequences better than 1.0e-10: 32
Number of HSP's gapped: 3919
Number of HSP's successfully gapped: 46
Length of query: 1107
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 996
Effective length of database: 11,240,047
Effective search space: 11195086812
Effective search space used: 11195086812
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 161 (66.6 bits)