BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0143700 Os07g0143700|AK068871
(329 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0143700 Similar to DEAD-Box RNA helicase-like protein 565 e-161
Os03g0827700 Similar to ATP-dependent RNA helicase 294 8e-80
Os12g0611200 DEAD/DEAH box helicase, N-terminal domain cont... 215 3e-56
Os09g0520700 Similar to RNA helicase 189 3e-48
Os11g0689400 WW/Rsp5/WWP domain containing protein 154 9e-38
Os01g0172200 WW/Rsp5/WWP domain containing protein 152 4e-37
Os07g0301200 Similar to RNA helicase (Fragment) 150 2e-36
Os11g0599500 Similar to RNA helicase (Fragment) 148 5e-36
Os01g0549400 Similar to RNA helicase-like protein DB10 145 3e-35
Os07g0202100 Similar to ATP-dependent RNA helicase ded1 143 1e-34
AK107287 142 3e-34
AK111212 140 1e-33
Os03g0805200 Similar to RNA helicase (Fragment) 139 2e-33
Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (... 137 9e-33
Os10g0503700 Similar to RNA helicase (Fragment) 135 3e-32
Os03g0308500 DEAD/DEAH box helicase, N-terminal domain cont... 135 3e-32
Os08g0159900 DEAD/DEAH box helicase, N-terminal domain cont... 134 1e-31
AK119751 133 2e-31
Os02g0641800 Similar to RNA helicase (Fragment) 132 3e-31
Os04g0533000 Similar to RNA helicase (Fragment) 132 4e-31
Os02g0150100 Similar to DEAD-box protein abstrakt 130 2e-30
AK110107 129 3e-30
Os03g0708600 DEAD/DEAH box helicase, N-terminal domain cont... 128 7e-30
Os12g0481100 Similar to RNA helicase 127 1e-29
Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (... 124 1e-28
Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (... 124 1e-28
Os07g0633500 DEAD/DEAH box helicase, N-terminal domain cont... 122 3e-28
Os03g0669000 Similar to RNA helicase (Fragment) 121 9e-28
Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A) 120 1e-27
Os04g0510400 Similar to RNA helicase (Fragment) 120 1e-27
Os02g0826100 Similar to RNA helicase (Fragment) 120 2e-27
Os01g0618400 Similar to RNA helicase (Fragment) 119 4e-27
Os02g0146600 Similar to Eukaryotic initiation factor 4A (eI... 119 4e-27
Os01g0164500 Similar to ATP-dependent RNA helicase-like pro... 118 5e-27
Os08g0416100 DEAD/DEAH box helicase, N-terminal domain cont... 116 2e-26
Os01g0618500 Similar to RNA helicase (Fragment) 114 1e-25
Os07g0660000 112 5e-25
Os03g0219700 DEAD/DEAH box helicase, N-terminal domain cont... 106 2e-23
Os06g0535100 Similar to Helicase pitchoune (Fragment) 105 7e-23
Os01g0184500 DEAD/DEAH box helicase, N-terminal domain cont... 104 8e-23
Os02g0636300 DEAD/DEAH box helicase, N-terminal domain cont... 103 1e-22
Os01g0549700 Similar to RNA helicase (Fragment) 102 3e-22
Os01g0550000 DEAD/DEAH box helicase, N-terminal domain cont... 102 3e-22
Os03g0728800 Similar to RNA helicase (Fragment) 102 3e-22
Os07g0647900 DEAD/DEAH box helicase, N-terminal domain cont... 96 4e-20
Os03g0108600 DEAD/DEAH box helicase, N-terminal domain cont... 94 1e-19
Os05g0110500 Similar to RNA helicase (Fragment) 94 1e-19
Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (... 76 4e-14
Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment) 68 8e-12
>Os07g0143700 Similar to DEAD-Box RNA helicase-like protein
Length = 329
Score = 565 bits (1456), Expect = e-161, Method: Compositional matrix adjust.
Identities = 281/294 (95%), Positives = 281/294 (95%)
Query: 36 DPCXXXXXXXXXXXXXFHGSPSPLGFRSTPASWSSPEAGAAVGGDDGLEVARLGISPWIV 95
DPC FHGSPSPLGFRSTPASWSSPEAGAAVGGDDGLEVARLGISPWIV
Sbjct: 36 DPCRGPAAPEPPRRRAFHGSPSPLGFRSTPASWSSPEAGAAVGGDDGLEVARLGISPWIV 95
Query: 96 ERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSG 155
ERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSG
Sbjct: 96 ERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSG 155
Query: 156 RNPLAIILAPTRELARQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRI 215
RNPLAIILAPTRELARQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRI
Sbjct: 156 RNPLAIILAPTRELARQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRI 215
Query: 216 IDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRK 275
IDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRK
Sbjct: 216 IDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRK 275
Query: 276 ITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKVSTLLNV 329
ITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKVSTLLNV
Sbjct: 276 ITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKVSTLLNV 329
>Os03g0827700 Similar to ATP-dependent RNA helicase
Length = 723
Score = 294 bits (752), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 146/247 (59%), Positives = 188/247 (76%), Gaps = 3/247 (1%)
Query: 80 DDGLEVARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGI 139
+D L +ARLG+ +V L RGIT LFPIQRAVL PA+ G+D+I RA+TGTGKTLAFGI
Sbjct: 66 EDELAIARLGLPEQLVSTLEKRGITHLFPIQRAVLIPALDGRDLIARAKTGTGKTLAFGI 125
Query: 140 PIMDRILRHNEKNG--SGRNPLAIILAPTRELARQVEKEFKESAP-LDSLCVYGGVPISH 196
P++ +++ ++ GR P ++LAPTRELA+QVEKE KESAP L ++CVYGGV +
Sbjct: 126 PMIKQLMEEDDGRSVRRGRIPRVLVLAPTRELAKQVEKEIKESAPKLSTVCVYGGVSYNV 185
Query: 197 QMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL 256
Q AL+ GVDVVVGTPGRIIDL+ G L L E++++VLDEADQMLAVGF+EDVE I++ L
Sbjct: 186 QQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVKYLVLDEADQMLAVGFEEDVETILQQL 245
Query: 257 PQNRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSI 316
P RQSMLFSATMP W++K++ +YL +P+ IDLVGD+D+KL EGI LY+I K ++
Sbjct: 246 PAERQSMLFSATMPGWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTSTSKRTV 305
Query: 317 LGPLIKV 323
L LI V
Sbjct: 306 LSDLITV 312
>Os12g0611200 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 157
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 95/140 (67%), Positives = 124/140 (88%)
Query: 152 NGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGT 211
N G+ PLAI+LAPTRELA+QVE+EF +S+ ++++CVYGG PIS Q+R LNYGVDVV+GT
Sbjct: 5 NSPGKFPLAIVLAPTRELAKQVEREFSDSSNVETICVYGGTPISQQIRQLNYGVDVVIGT 64
Query: 212 PGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPS 271
PGR+IDLL+RG LNLSE++FVVLDEADQML+VGFDEDVE I++ +P RQ+++FSATMP+
Sbjct: 65 PGRVIDLLKRGALNLSEVRFVVLDEADQMLSVGFDEDVETILDRVPPKRQTLMFSATMPT 124
Query: 272 WIRKITSKYLKDPIIIDLVG 291
WI+++T KYLK+P+ IDLV
Sbjct: 125 WIQRLTQKYLKNPVTIDLVS 144
>Os09g0520700 Similar to RNA helicase
Length = 696
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 151/249 (60%), Gaps = 10/249 (4%)
Query: 85 VARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDR 144
+A IS + E+L ++GI LFPIQ D + G D++GRARTG GKTLAF +PI++
Sbjct: 117 LANFRISESLREKLKSKGIKALFPIQATTFDLVLDGHDLVGRARTGQGKTLAFVLPILES 176
Query: 145 IL----RHNEKNGSGRNPLAIILAPTRELARQVEKEFK---ESAPLDSLCVYGGVPISHQ 197
++ + + + GR P ++L PTRELA+QV +F + L + CVYGG Q
Sbjct: 177 LVNGTHKASRRTDYGRPPTVLVLLPTRELAKQVHTDFAFYGATFGLSACCVYGGSDYRSQ 236
Query: 198 MRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLP 257
A+ GVD+VVGTPGR+ D + +G LN ++F VLDEAD+ML +GF +DVE+I+ +
Sbjct: 237 EMAIRKGVDIVVGTPGRVKDFVEKGTLNFRSLKFRVLDEADEMLNMGFVDDVELILGKVE 296
Query: 258 Q--NRQSMLFSATMPSWIRKITSKYLKD-PIIIDLVGDEDQKLPEGISLYSIASEHYGKP 314
Q++LFSAT+P W++K++ ++LK +DLVGDE K + ++ +
Sbjct: 297 DVTKVQTLLFSATIPEWVKKLSLRFLKSGKKTVDLVGDEKLKASASVRHLALPCNRAARA 356
Query: 315 SILGPLIKV 323
++ +I+
Sbjct: 357 QVIPDIIRC 365
>Os11g0689400 WW/Rsp5/WWP domain containing protein
Length = 1398
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 125/204 (61%), Gaps = 5/204 (2%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
G P I++ + A G PIQ A+Q +D++ A+TG+GKTL + IP + R+
Sbjct: 610 GFPPEILQEIHAAGFLNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRY 669
Query: 149 NEKNGSGRNPLAIILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGV 205
+N P ++LAPTRELA Q++ E F S+ + C+YGG Q+R L G
Sbjct: 670 --QNNPMLGPTVLVLAPTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGA 727
Query: 206 DVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLF 265
D+VV TPGR+ D+L ++L ++ F+VLDEAD+ML +GF+ + I++ +P+NRQ++++
Sbjct: 728 DIVVATPGRLNDILEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMY 787
Query: 266 SATMPSWIRKITSKYLKDPIIIDL 289
+AT P + KI LKDP+ +++
Sbjct: 788 TATWPKEVTKIAGDLLKDPVQVNI 811
>Os01g0172200 WW/Rsp5/WWP domain containing protein
Length = 759
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 94 IVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIP--IMDRILRHNEK 151
I ++ G + PIQ A++ +D++ A+TG+GKTL + IP I+ + L+HN +
Sbjct: 242 IYVKVQQAGFSAPTPIQAQSWPIALRNRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSR 301
Query: 152 NGSGRNPLAIILAPTRELARQVE---KEFKESAPLDSLCVYGGVPISHQMRALNYGVDVV 208
+G P ++L+PTRELA Q++ K+F S+ + S+C+YGG P Q+R L G D+V
Sbjct: 302 DG----PTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDLERGADIV 357
Query: 209 VGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSAT 268
V TPGR+ D+L ++L ++ ++VLDEAD+ML +GF+ + I++ + RQ+++F+AT
Sbjct: 358 VATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVKQVQPKRQTLMFTAT 417
Query: 269 MPSWIRKITSKYLKDPIIIDLVGDEDQ 295
P +RKI S L +P+ ++ +G+ DQ
Sbjct: 418 WPKEVRKIASDLLSNPVQVN-IGNTDQ 443
>Os07g0301200 Similar to RNA helicase (Fragment)
Length = 512
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 99 AARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH-NEKNGSGRN 157
+G R PIQ + G+D IG A TG+GKT+AFG+P + + R EK+
Sbjct: 108 CCKGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGV 167
Query: 158 PLAIILAPTRELARQVEKEFKES-AP--LDSLCVYGGVPISHQMRALNYGVDVVVGTPGR 214
P ++L+PTRELA+Q+ E+ AP + S+C+YGG Q+ AL GVD+V+GTPGR
Sbjct: 168 PRVLVLSPTRELAQQIADVLCEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGR 227
Query: 215 IIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIR 274
+ DL+ G+ L+++ FVVLDEAD+ML +GF+ +V I+ RQ+++FSAT P +
Sbjct: 228 MKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVH 287
Query: 275 KITSKYLKDPIIIDLVGDED 294
++ +++ I ++G ED
Sbjct: 288 QLAQEFMDPNPIKVVIGSED 307
>Os11g0599500 Similar to RNA helicase (Fragment)
Length = 623
Score = 148 bits (374), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 124/196 (63%), Gaps = 13/196 (6%)
Query: 105 RLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR----HNEKNGSGRN--P 158
R P+QR + ++ G+D++ A+TG+GKT AF PI+ I+R + G R P
Sbjct: 177 RPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGMRTACP 236
Query: 159 LAIILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRI 215
LA+IL+PTREL+ Q+ +E F + + YGG PI+ Q+R L GVD++V TPGR+
Sbjct: 237 LALILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRL 296
Query: 216 IDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL----PQNRQSMLFSATMPS 271
+DLL R ++L I+++ LDEAD+ML +GF+ V I+E + P RQ+MLFSAT P
Sbjct: 297 VDLLERARVSLQSIRYLALDEADRMLDMGFEPQVRRIVEQMDMPPPGARQTMLFSATFPK 356
Query: 272 WIRKITSKYLKDPIII 287
I+++ S +L++ I +
Sbjct: 357 EIQRMASDFLENYIFL 372
>Os01g0549400 Similar to RNA helicase-like protein DB10
Length = 792
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 124/204 (60%), Gaps = 5/204 (2%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
G P I++ + G + PIQ A+Q +D++ A+TG+GKTL + +P I R
Sbjct: 156 GFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRL 215
Query: 149 NEKNGSGRNPLAIILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGV 205
SG P ++LAPTRELA Q+ +E F S+ + S C+YGG P Q+R L+ GV
Sbjct: 216 QNNPRSG--PTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGV 273
Query: 206 DVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLF 265
DVVV TPGR+ D+L ++L ++ ++VLDEAD+ML +GF+ + I++ +P RQ++++
Sbjct: 274 DVVVATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMY 333
Query: 266 SATMPSWIRKITSKYLKDPIIIDL 289
+AT P +R+I L P+ + +
Sbjct: 334 TATWPKEVRRIAEDLLVHPVQVTI 357
>Os07g0202100 Similar to ATP-dependent RNA helicase ded1
Length = 638
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 119/191 (62%), Gaps = 11/191 (5%)
Query: 108 PIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHN----EKNGSGRNPLAIIL 163
P+QR + ++ G+D++ A+TG+GKT AF PI+ I+R + PLA+IL
Sbjct: 194 PVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMRSRPPPRSRGSRTAYPLALIL 253
Query: 164 APTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLR 220
+PTREL+ Q+ +E F + + YGG PI+ Q+R L GV+++V TPGR++DLL
Sbjct: 254 SPTRELSVQIHEEARKFAYQTGVKVVVAYGGAPITQQLRELERGVEILVATPGRLMDLLE 313
Query: 221 RGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQ----NRQSMLFSATMPSWIRKI 276
R ++L I+++ LDEAD+ML +GF+ + I+E + RQ+MLFSAT P I+++
Sbjct: 314 RARVSLQMIKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGERQTMLFSATFPKEIQRM 373
Query: 277 TSKYLKDPIII 287
S +L D I +
Sbjct: 374 ASDFLADYIFL 384
>AK107287
Length = 554
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 133/240 (55%), Gaps = 6/240 (2%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
G +I+ + G IQ A+ G+D++ A TG+GKT+ F +P M I
Sbjct: 139 GFPDYILSEIKKMGFAEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQ 198
Query: 149 NE-KNGSGRNPLAIILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYG 204
K G G P+A+ILAPTRELA Q++ E F S+ L + VYGGVP Q R L G
Sbjct: 199 PLLKPGDG--PIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQTRDLQRG 256
Query: 205 VDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSML 264
++V+ TPGR+ID++ G NL + ++V+DEAD+ML +GF+ + I++ + +RQ+++
Sbjct: 257 AEIVIATPGRLIDMVDAGKTNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLM 316
Query: 265 FSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLIKVS 324
FSAT P ++++ +L D +++ E + + SE K ++G L +S
Sbjct: 317 FSATWPKEVQRLAGDFLNDFAQVNIGSTELAANHNVKQIIEVCSEFEKKGKLIGHLETIS 376
>AK111212
Length = 545
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 127/206 (61%), Gaps = 8/206 (3%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
G ++++ + A+G IQ A+ G+D++G A TG+GKTL + +P I+
Sbjct: 143 GFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLP---SIVHI 199
Query: 149 NEKN--GSGRNPLAIILAPTRELARQVEKEFKE---SAPLDSLCVYGGVPISHQMRALNY 203
N + G P+ ++LAPTRELA Q+++E K+ S+ + + CVYGGVP Q+R L+
Sbjct: 200 NAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSR 259
Query: 204 GVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSM 263
GV+V + TPGR+ID+L G NL + ++VLDEAD+ML +GF+ + I+ + +RQ++
Sbjct: 260 GVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTL 319
Query: 264 LFSATMPSWIRKITSKYLKDPIIIDL 289
+SA P +R + S +L D I +++
Sbjct: 320 TWSAAWPKEVRALASDFLNDFIQVNI 345
>Os03g0805200 Similar to RNA helicase (Fragment)
Length = 637
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 122/191 (63%), Gaps = 11/191 (5%)
Query: 108 PIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRIL--RHNEKNGSGRN--PLAIIL 163
P+QR + ++ G+D++ A+TG+GKT AF PI+ I+ R ++ R PLA+IL
Sbjct: 199 PVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSSRPPQRPRGSRTAYPLALIL 258
Query: 164 APTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLR 220
+PTREL+ Q+ +E F + + YGG PI Q+R L GV+++V TPGR++DLL
Sbjct: 259 SPTRELSVQIHEEARKFAYQTGVRVVVAYGGAPIHQQLRELERGVEILVATPGRLMDLLE 318
Query: 221 RGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL---PQN-RQSMLFSATMPSWIRKI 276
R ++L ++++ LDEAD+ML +GF+ + I+E + P+ RQ+MLFSAT P I+++
Sbjct: 319 RARVSLQMVKYLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTMLFSATFPKEIQRM 378
Query: 277 TSKYLKDPIII 287
S +L D I +
Sbjct: 379 ASDFLADYIFL 389
>Os06g0602400 Similar to DEAD-box protein 3, X-chromosomal (DEAD-box RNA helicase
DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1PAS1 related
sequence 2)
Length = 484
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 128/207 (61%), Gaps = 19/207 (9%)
Query: 118 MQGKDMIGRARTGTGKTLAFGIPIMDRILR-------HNEK---NGSGRNPLAIILAPTR 167
+ G+D++ A+TG+GKT AF +P++ ++ H E+ N + P A++LAPTR
Sbjct: 1 LAGRDLMACAQTGSGKTAAFCLPVVSGLVAAGGSGIGHRERSSFNRAAAKPRALVLAPTR 60
Query: 168 ELARQVEKEFKE---SAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGVL 224
ELA Q+ +E K+ L + YGG P+ +Q+R L G D++V TPGR++D++ R +
Sbjct: 61 ELAAQINEEAKKFSFQTGLRVVVAYGGTPMYNQLRDLERGADILVATPGRLVDMVERSKV 120
Query: 225 NLSEIQFVVLDEADQMLAVGFDEDVEVIME--NLPQN--RQSMLFSATMPSWIRKITSKY 280
+L I+++V+DEAD+ML +GF+ + I+E N+P+ RQ+MLFSAT P I+++ S +
Sbjct: 121 SLEAIKYLVMDEADRMLDMGFEPQIRKIVERMNMPRKSVRQTMLFSATFPPEIQRLASDF 180
Query: 281 LKDPIIIDL--VGDEDQKLPEGISLYS 305
L + I I + VG + + + L S
Sbjct: 181 LSNYIFITVGRVGSSTDLIMQKVELLS 207
>Os10g0503700 Similar to RNA helicase (Fragment)
Length = 521
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 122/224 (54%), Gaps = 12/224 (5%)
Query: 101 RGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLA 160
+G R PIQ + A+ G D++ RA+ GTGKT AF IP +++I EKN
Sbjct: 165 KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--DPEKNAIQ----V 218
Query: 161 IILAPTRELA---RQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIID 217
+IL PTRELA QV KE + + + GG + + L V ++VGTPGRI+D
Sbjct: 219 VILVPTRELALQTSQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILD 278
Query: 218 LLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKIT 277
L R+G+ L + +V+DEAD++LA F +E ++ LP NRQ ++FSAT P ++
Sbjct: 279 LTRKGICVLKDCSMLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFK 338
Query: 278 SKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLI 321
KYL P +I+L+ D+ +GI+ Y E K L L
Sbjct: 339 EKYLPRPYVINLM---DELTLKGITQYYAFVEERQKVHCLNTLF 379
>Os03g0308500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 770
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 118/205 (57%), Gaps = 4/205 (1%)
Query: 86 ARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI 145
A G ++ +A +G + IQ L + G+D+IG A+TG+GKT AF +P++ I
Sbjct: 222 ADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHI 281
Query: 146 LRHNEKNGSGRNPLAIILAPTRELARQV---EKEFKESAPLDSLCVYGGVPISHQMRALN 202
+ E P+ ++ APTRELA Q+ K+F + L VYGGV Q + L
Sbjct: 282 MDQPELEKE-EGPIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELK 340
Query: 203 YGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQS 262
G ++V+ TPGR+IDLL+ L + ++VLDEAD+M +GF+ + I+ + +RQ+
Sbjct: 341 AGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQT 400
Query: 263 MLFSATMPSWIRKITSKYLKDPIII 287
+LFSATMP + ++ + L DPI +
Sbjct: 401 LLFSATMPYKVERLAREILTDPIRV 425
>Os08g0159900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 1049
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 125/212 (58%), Gaps = 13/212 (6%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
G++ +++ + G + IQ L M G+D IG A+TG+GKTLAF +P+ LRH
Sbjct: 430 GLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPM----LRH 485
Query: 149 NEKNGS---GRNPLAIILAPTRELARQVE---KEFKESAPLDSLCVYGGVPISHQMRALN 202
+ + G P+ +I+APTREL Q+ K+F ++ ++ + +YGG ++ Q+ L
Sbjct: 486 VKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAIYGGSGVAQQISELK 545
Query: 203 YGVDVVVGTPGRIIDLLRRG---VLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQN 259
G ++VV TPGR+ID+L + NL + F+V+DEAD+M +GF+ + I++N +
Sbjct: 546 RGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPD 605
Query: 260 RQSMLFSATMPSWIRKITSKYLKDPIIIDLVG 291
RQ++LFSAT P + + K L P+ I + G
Sbjct: 606 RQTVLFSATFPRQVEILARKVLTKPVEIQVGG 637
>AK119751
Length = 628
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 122/194 (62%), Gaps = 10/194 (5%)
Query: 104 TRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHN-EKNGSGRN--PLA 160
T+ P+QR + + G+D++ A+TG+GKT AF PI+ +++ + G R P A
Sbjct: 186 TKPTPVQRYAIPIGLAGRDIMACAQTGSGKTAAFCFPIISGLVKAGYQPTGRQRKALPAA 245
Query: 161 IILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIID 217
+ILAPTREL Q+ +E F + + + +YGG P+ +Q+R + G D++V TP R+ D
Sbjct: 246 LILAPTRELTSQIYEEARKFSYQSGIRPVVIYGGAPVVNQLREMERGCDMLVATPRRLSD 305
Query: 218 LLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIM--ENLPQ--NRQSMLFSATMPSWI 273
L+ R ++L+ I+++ LDEAD+ML +GF+ + I+ E++P RQ+MLFSAT P I
Sbjct: 306 LIERARVSLAAIRYLALDEADRMLDMGFEPQIRRIVEGEDMPPTGQRQTMLFSATFPKEI 365
Query: 274 RKITSKYLKDPIII 287
+++ + +L D I +
Sbjct: 366 QRLAADFLHDYIFL 379
>Os02g0641800 Similar to RNA helicase (Fragment)
Length = 483
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 123/224 (54%), Gaps = 12/224 (5%)
Query: 101 RGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLA 160
+G R PIQ + A+ G D++ RA+ GTGKT AF IP +++I EKN
Sbjct: 127 KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--DQEKNAIQ----V 180
Query: 161 IILAPTRELA---RQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIID 217
+IL PTRELA QV KE + + + GG + + L V ++VGTPGRI+D
Sbjct: 181 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIIRLYQPVHLLVGTPGRILD 240
Query: 218 LLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKIT 277
L ++G+ L + +++DEAD++L+ F VE ++ LP +RQ ++FSAT P +++
Sbjct: 241 LTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQLIRYLPASRQILMFSATFPVTVKEFK 300
Query: 278 SKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLI 321
KYL P +I+L+ D+ +GI+ + E K L L
Sbjct: 301 DKYLPKPYVINLM---DELTLKGITQFYAFVEERQKVHCLNTLF 341
>Os04g0533000 Similar to RNA helicase (Fragment)
Length = 498
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 122/224 (54%), Gaps = 12/224 (5%)
Query: 101 RGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLA 160
+G R PIQ + A+ G D++ RA+ GTGKT AF IP +++I +KN
Sbjct: 142 KGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI--DQDKNAIQ----V 195
Query: 161 IILAPTRELA---RQVEKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIID 217
+IL PTRELA QV KE + + + GG + + L V ++VGTPGRI+D
Sbjct: 196 VILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLLVGTPGRILD 255
Query: 218 LLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKIT 277
L ++GV L +V+DEAD++L+ F ++ ++ LP NRQ ++FSAT P +++
Sbjct: 256 LTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSATFPVTVKEFK 315
Query: 278 SKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILGPLI 321
KYL P +I+L+ D+ +GI+ + E K L L
Sbjct: 316 DKYLPKPYVINLM---DELTLKGITQFYAFVEERQKVHCLNTLF 356
>Os02g0150100 Similar to DEAD-box protein abstrakt
Length = 460
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 128/231 (55%), Gaps = 21/231 (9%)
Query: 77 VGGDDGLEVAR----LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTG 132
V GDD AR L + ++ +L +GI + PIQ L + G+DMIG A TG+G
Sbjct: 5 VDGDDVPPPARDFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSG 64
Query: 133 KTLAFGIPIMDRILRHNEKNG--SGRNPLAIILAPTRELARQV------------EKEFK 178
KTL F +P++ L+ G P +I+ P+RELA+Q E +
Sbjct: 65 KTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYP 124
Query: 179 ESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEAD 238
E PL LC+ GGV + Q+ + GV +VV TPGR+ DLL + +NL +++ LDEAD
Sbjct: 125 EIRPL--LCI-GGVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEAD 181
Query: 239 QMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKDPIIIDL 289
+++ +GF++D+ + ++ RQ++LFSATMP I+ L P+I+++
Sbjct: 182 RLVDLGFEDDIREVFDHFKAQRQTLLFSATMPKKIQNFAKSALVKPVIVNV 232
>AK110107
Length = 671
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 126/214 (58%), Gaps = 20/214 (9%)
Query: 108 PIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEK-------NGSGRN--- 157
P+Q+ + M G+D++ A+TG+GKT F PI+ + + G GR
Sbjct: 205 PVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILSQAFQTGPSANPTAGGGGFGRQRKA 264
Query: 158 -PLAIILAPTRELARQV---EKEFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPG 213
P ++ILAPTREL Q+ ++F + + VYGG I Q+R + G D++V TPG
Sbjct: 265 YPTSLILAPTRELVSQIYDESRKFAYRSWVRPCVVYGGADIGSQLRQIERGCDLLVATPG 324
Query: 214 RIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIM--ENLP--QNRQSMLFSATM 269
R++DL+ RG ++L I+++VLDEAD+ML +GF+ + I+ E++P Q+RQ+++FSAT
Sbjct: 325 RLVDLIERGRISLQNIKYLVLDEADRMLDMGFEPQIRRIVEGEDMPNVQDRQTLMFSATS 384
Query: 270 PSWIRKITSKYLKDPIIIDL--VGDEDQKLPEGI 301
P I+ + +LKD I + + VG + + + +
Sbjct: 385 PRDIQMLARDFLKDYIFLSVGRVGSTSENITQKV 418
>Os03g0708600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 736
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 118/208 (56%), Gaps = 30/208 (14%)
Query: 108 PIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR------HNEKNGSGRNPLAI 161
PIQ A + +Q +D+IG A TG+GKT AF +P++ I R NE G P A+
Sbjct: 340 PIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPMLSYITRLPPISEENEAEG----PYAV 395
Query: 162 ILAPTRELARQVEKE---FKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDL 218
++APTRELA+Q+E+E F + + + GG I Q + G +VV+ TPGR++D
Sbjct: 396 VMAPTRELAQQIEEETVKFATYLGIKVVSIVGGQSIEEQGFKIRQGCEVVIATPGRLLDC 455
Query: 219 LRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQN-----------------RQ 261
L R L++ +VVLDEAD+M+ +GF+ V +++ +P + R
Sbjct: 456 LERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSSNLKPENEDEELDAKTIYRT 515
Query: 262 SMLFSATMPSWIRKITSKYLKDPIIIDL 289
+ +FSATMP + ++ KYL++P+++ +
Sbjct: 516 TYMFSATMPPAVERLARKYLRNPVVVTI 543
>Os12g0481100 Similar to RNA helicase
Length = 832
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/228 (35%), Positives = 131/228 (57%), Gaps = 10/228 (4%)
Query: 65 PASWSSPEAGAAVGGDDGLEVARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMI 124
P+ + + GA+ + LE L +S ++ A G + PIQ A + A+ G+D+
Sbjct: 209 PSKFFASSEGASFHANSFLE---LNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDIC 265
Query: 125 GRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPL- 183
G A TG+GKT AF +P+++R+L ++ + R +IL PTRELA QV ++ A
Sbjct: 266 GSAITGSGKTAAFSLPVLERLLFRPKRVPAIR---VLILTPTRELAAQVHSMIEKLAQFT 322
Query: 184 DSLC--VYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGV-LNLSEIQFVVLDEADQM 240
D C + GG+ Q AL D+VV TPGRIID LR + + L ++ ++LDEAD++
Sbjct: 323 DIRCCLIVGGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRL 382
Query: 241 LAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKDPIIID 288
L +GF +++ ++ P+ RQ+MLFSATM I ++ + L P+ ++
Sbjct: 383 LELGFSAEIQELIRMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLE 430
>Os01g0639100 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 11/226 (4%)
Query: 87 RLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRIL 146
++GI ++ + A G + IQ+ + P + G+D+I +A++GTGKT + + +
Sbjct: 35 QMGIRDDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIV- 93
Query: 147 RHNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVY---GGVPISHQMRALNY 203
+ + R A+IL+PTRELA Q E+ ++ V+ GG I +R L +
Sbjct: 94 -----DTAVREVQALILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEH 148
Query: 204 GVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSM 263
GV VV GTPGR+ D+++R L I+ ++LDEAD+ML GF + + + LP Q
Sbjct: 149 GVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVC 208
Query: 264 LFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASE 309
L SAT+P I ++TSK++ DP+ I + D+ EGI + +A E
Sbjct: 209 LISATLPHEILEMTSKFMTDPVRI--LVKRDELTLEGIKQFFVAVE 252
>Os03g0566800 Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)
Length = 404
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 125/226 (55%), Gaps = 11/226 (4%)
Query: 87 RLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRIL 146
++GI ++ + A G + IQ+ + P + G+D+I +A++GTGKT + + +
Sbjct: 35 QMGIREDLLRGIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIV- 93
Query: 147 RHNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVY---GGVPISHQMRALNY 203
+ + R A+IL+PTRELA Q E+ ++ V+ GG I +R L +
Sbjct: 94 -----DTAVREVQALILSPTRELAAQTERVMLAIGDYINIQVHACIGGKSIGEDIRKLEH 148
Query: 204 GVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSM 263
GV VV GTPGR+ D+++R L I+ ++LDEAD+ML GF + + + LP Q
Sbjct: 149 GVHVVSGTPGRVCDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVC 208
Query: 264 LFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASE 309
L SAT+P I ++TSK++ DP+ I + D+ EGI + +A E
Sbjct: 209 LISATLPHEILEMTSKFMTDPVRI--LVKRDELTLEGIKQFFVAVE 252
>Os07g0633500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 501
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 116/200 (58%), Gaps = 18/200 (9%)
Query: 86 ARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI 145
A LG+S W+V+ + G+ +QR + A++G+D++G A TG+GKT AF +PI+ R+
Sbjct: 80 AELGLSQWLVDVCDSLGMRVPTAVQRRCIPRALEGRDVLGIAETGSGKTAAFALPILHRL 139
Query: 146 LRHNEKNGSGRNPL---AIILAPTRELARQVEKEFKE-SAPLDSLCV--YGGVPISHQMR 199
G +P A+ LAPTRELA Q+ ++F+ APL C+ GG Q +
Sbjct: 140 ---------GEDPYGVAALALAPTRELAAQLAEQFRALGAPLGLRCLAAIGGFDSLGQAK 190
Query: 200 ALNYGVDVVVGTPGRIIDLLRRG---VLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL 256
L VVV TPGRI L+ + +F+VLDEAD++L + F+ED+ VI +L
Sbjct: 191 GLARRPHVVVATPGRIATLINDDPDLAKVFARTKFLVLDEADRVLDINFEEDLRVIFGSL 250
Query: 257 PQNRQSMLFSATMPSWIRKI 276
P+ RQ+ LFSAT+ +R +
Sbjct: 251 PKKRQTFLFSATISDNLRSL 270
>Os03g0669000 Similar to RNA helicase (Fragment)
Length = 472
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 126/209 (60%), Gaps = 10/209 (4%)
Query: 86 ARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI 145
A LG+ P +V A G IQ + A++G+D+IG +TG+GKT AF +PI+ +
Sbjct: 44 AELGVVPELVAACDAMGWKEPTRIQAEAIPHALEGRDLIGLGQTGSGKTGAFALPIIQAL 103
Query: 146 LRHNEKNGSGRNPLAIILAPTRELARQVEKEFK---ESAPLDSLCVYGGVPISHQMRALN 202
L+ ++ A +L+PTRELA Q+ ++F+ + L + GGV Q +L
Sbjct: 104 LKQDKPQA----LFACVLSPTRELAFQIGQQFEALGSAIGLSCTVLVGGVDRVQQAVSLA 159
Query: 203 YGVDVVVGTPGRIIDLLR--RGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNR 260
+VVGTPGR++D L +G +L++++++VLDEAD++L V F + ++ I+ +P+ R
Sbjct: 160 KRPHIVVGTPGRLLDHLTDTKG-FSLNKLKYLVLDEADKLLNVEFQKALDDILNVIPKER 218
Query: 261 QSMLFSATMPSWIRKITSKYLKDPIIIDL 289
++ LFSATM + + K+ L++P+ +++
Sbjct: 219 RTFLFSATMTNKVSKLQRACLRNPVKVEV 247
>Os06g0701100 Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 123/225 (54%), Gaps = 11/225 (4%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
+G+ ++ + A G + IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 46 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 103
Query: 148 HNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVY---GGVPISHQMRALNYG 204
+ + A++LAPTRELA+Q+EK + + V+ GG + R L G
Sbjct: 104 ----DYAVVECQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASG 159
Query: 205 VDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSML 264
V VVVGTPGR+ D+LRR L I+ VLDEAD+ML+ GF + + I + LP Q +
Sbjct: 160 VHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGV 219
Query: 265 FSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASE 309
FSATMP +IT K++ P+ I + D+ EGI + + E
Sbjct: 220 FSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVE 262
>Os04g0510400 Similar to RNA helicase (Fragment)
Length = 832
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 122/241 (50%), Gaps = 45/241 (18%)
Query: 74 GAAVGGDDGLEVARLGISPWIVERLAARGITRLFPIQRAVL-DPAMQGKDMIGRARTGTG 132
G +G D+ L + P ++ + G PIQ+A A QGKD+IG A TG+G
Sbjct: 189 GLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSG 248
Query: 133 KTLAFGIPIMDRILRHNEK-------------NGSGRNPL-AIILAPTRELARQVEKEFK 178
KTLAFG+PI+ R+L EK S +PL A+IL PTRELA+QV K
Sbjct: 249 KTLAFGLPILQRLLEEQEKAMRLSREDESTQDENSRESPLRALILTPTRELAKQVCDHLK 308
Query: 179 ESAPLDSLCV---YGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRG---VLNLSEIQFV 232
E+A + V GG+ + Q R L ++VVGTPGR+ +L+ G ++ L + F
Sbjct: 309 EAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRLWELMSTGNQHLIKLHSLSFF 368
Query: 233 VLDEADQMLAVGFDEDVEVIMENLP------------------------QNRQSMLFSAT 268
VLDEAD+M+ G +++ I+E LP + RQ+ +FSAT
Sbjct: 369 VLDEADRMIERGHFHELQSIIEMLPVTNGSDEQTVGTTPSCETVPILQIKKRQTFVFSAT 428
Query: 269 M 269
+
Sbjct: 429 L 429
>Os02g0826100 Similar to RNA helicase (Fragment)
Length = 811
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 124/214 (57%), Gaps = 11/214 (5%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
GISP V+ L G + +Q L ++GKD++ +A+TGTGK+ AF +P ++ +L
Sbjct: 348 GISPLTVKALTDAGYVQTTVVQETALPMCLEGKDVLVKAKTGTGKSAAFLLPAIESVLNA 407
Query: 149 NEKNGSGR-NPL-AIILAPTRELARQVEKE----FKESAPLDSLCVYGGVPISHQMRALN 202
+ + + R +P+ ++IL PTRELA Q+ E K + + GG R L
Sbjct: 408 MKSHTNHRVSPIFSLILCPTRELAIQLTAEANVLLKYHQGIGVQSLIGGTRFKLDQRRLE 467
Query: 203 YG-VDVVVGTPGRIIDLLRRGV---LNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQ 258
++V TPGR++D + + L ++ +VLDEAD +L +GF D+E I+++LP+
Sbjct: 468 SDPCQILVATPGRLLDHIENKSSFSVRLMGLKLLVLDEADHLLDLGFRTDIEKIVDSLPR 527
Query: 259 NRQSMLFSATMPSWIRKITSKYLK-DPIIIDLVG 291
RQ++LFSAT+P +R+++ LK D + +D VG
Sbjct: 528 QRQTLLFSATIPKEVRRVSQLVLKRDHVFVDTVG 561
>Os01g0618400 Similar to RNA helicase (Fragment)
Length = 594
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 147/264 (55%), Gaps = 22/264 (8%)
Query: 66 ASWSSPEAGAAVGGDD--GLEVARLG--------ISPWIVERLAARGITRLFPIQRAVLD 115
A +PE AA GD+ G++ + L ISP ++ + G R+ +Q A L
Sbjct: 99 AEGEAPEFDAAKSGDESGGVDGSYLSDTRFDQCTISPLSLKAVKDAGYERMTQVQEATLP 158
Query: 116 PAMQGKDMIGRARTGTGKTLAFGIPIMDRI--LRHNEKNGSGRNPLAIILAPTRELARQV 173
+QGKD++ +A+TGTGKT+AF +P ++ + L ++ ++ + +++ PTRELA QV
Sbjct: 159 VILQGKDVLAKAKTGTGKTVAFLLPAIEVLSALPNSRRDQLRPSINLLVMCPTRELAIQV 218
Query: 174 ----EKEFKESAPLDSLCVYGGVPISHQMRALNYG-VDVVVGTPGRIIDLLRRG---VLN 225
+K K L V GG ++ + R++ ++V TPGR+ D +
Sbjct: 219 AVEAKKLLKYHRSLGVQVVIGGTRLTQEQRSMQANPCQILVATPGRLKDHVENTPGFSTR 278
Query: 226 LSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKDPI 285
L ++ +VLDEAD++L +GF D+E I+ ++P+ RQ++LFSAT+P +R+I+ +K
Sbjct: 279 LKGVKVLVLDEADRLLDMGFRRDIERIIASVPKERQTLLFSATVPEEVRQISHIAMKKNY 338
Query: 286 -IIDLVGDEDQKLPEGIS-LYSIA 307
I+ V D D++ +S ++ IA
Sbjct: 339 KFINTVKDGDEETHAQVSQMFMIA 362
>Os02g0146600 Similar to Eukaryotic initiation factor 4A (eIF4A) (eIF-4A)
Length = 414
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 11/225 (4%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
+G+ ++ + A G + IQ+ + P +G D+I +A++GTGKT F I+ ++
Sbjct: 46 MGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQL-- 103
Query: 148 HNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVY---GGVPISHQMRALNYG 204
+ +++LAPTRELA+Q+EK + + V+ GG + R L G
Sbjct: 104 ----DYGLVECQSLVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILASG 159
Query: 205 VDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSML 264
V VVVGTPGR+ D+LRR L I+ VLDEAD+ML+ GF + + I + LP Q +
Sbjct: 160 VHVVVGTPGRVFDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGV 219
Query: 265 FSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASE 309
FSATMP +IT K++ P+ I + D+ EGI + + E
Sbjct: 220 FSATMPPEALEITRKFMNKPVRI--LVKRDELTLEGIKQFYVNVE 262
>Os01g0164500 Similar to ATP-dependent RNA helicase-like protein
Length = 647
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 121/207 (58%), Gaps = 7/207 (3%)
Query: 89 GISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRH 148
+SP +V+ L G R P+Q A + + KD+ A TG+GKTLAF +P+++ ILR
Sbjct: 29 ALSPEVVKALKGGGFRRCTPVQAAAIPLLLSHKDVAVDAATGSGKTLAFVVPVVE-ILRR 87
Query: 149 NEKNGSGRNPLAIILAPTRELARQV----EKEFKESAPLDSLCVYGGVPISHQMRALNY- 203
L II++PTREL+ Q+ + F + S+ + GG I +++ L
Sbjct: 88 RPSPPKPHEVLGIIISPTRELSSQIYNVAQPFFATLKGVSSMLLVGGFDIKAELKKLEEE 147
Query: 204 GVDVVVGTPGRIIDLLRR-GVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQS 262
G +++VGTPG++ D++ R LN ++ ++LDEAD++L +GF + + I+ LP+ R++
Sbjct: 148 GANILVGTPGKLFDVMERLDTLNYKNLEILILDEADRLLDLGFQKQITSIISKLPKLRRT 207
Query: 263 MLFSATMPSWIRKITSKYLKDPIIIDL 289
LFSAT ++++ L++P+ +++
Sbjct: 208 GLFSATQTEAVKELAKAGLRNPVRVEV 234
>Os08g0416100 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 851
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 10/220 (4%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
+G+ + + +G PIQR + + G D+ ARTG+GKT AF +P++ R+ R
Sbjct: 54 MGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQRLRR 113
Query: 148 HNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSL---CVYGGVPISHQMRALNYG 204
H+ +G A+IL+PTR+LA Q K ++ L + GG + Q L
Sbjct: 114 HD----AGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQFEELAEN 169
Query: 205 VDVVVGTPGRIIDLLRR-GVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSM 263
D+++ TPGR++ L LNL +++VV DEAD + ++G + + I+ L RQ++
Sbjct: 170 PDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKLSDTRQTL 229
Query: 264 LFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISL 303
LFSAT+P + L+DP I+ L D D+K+ + L
Sbjct: 230 LFSATLPQALADFAKAGLRDPQIVRL--DLDKKISPDLKL 267
>Os01g0618500 Similar to RNA helicase (Fragment)
Length = 536
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 139/257 (54%), Gaps = 23/257 (8%)
Query: 66 ASWSSPEAGAAVGGDDGLEVARLG---ISPWIVERLAARGITRLFPIQRAVLDPAMQGKD 122
A S+ E G VG L R +SP ++ + G ++ +Q A L +QG+D
Sbjct: 56 AGMSAAEVGGVVGSH--LSETRFDQCPVSPLSLKAIKDAGYEKMTQVQEATLPIILQGED 113
Query: 123 MIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLA--IILAPTRELARQVEKE---- 176
++ +A+TGTGKT+AF +P ++ + + R+P +++ PTRELA QV E
Sbjct: 114 VLAKAKTGTGKTVAFLLPAIELL------STLPRSPSINLLVICPTRELANQVAAEARKL 167
Query: 177 FKESAPLDSLCVYGGVPISHQMRALNYG-VDVVVGTPGRIIDLLRR--GVLN-LSEIQFV 232
K L V GG + + R++ ++V TPGR+ D L G N + ++ +
Sbjct: 168 LKYHRSLGVQVVIGGTKLPQEQRSMQSNPCQILVATPGRLKDHLENTPGFSNRIKGVKVL 227
Query: 233 VLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKDPI-IIDLVG 291
VLDEAD++L +GF D+E I+ +P+ RQ++LFSAT+P +R+I+ +K I+ V
Sbjct: 228 VLDEADRLLDMGFRRDIEKIIAFIPKERQTLLFSATVPEEVRQISHIAMKRGYKFINTVK 287
Query: 292 DEDQKLPEGIS-LYSIA 307
+ D++ +S +Y +A
Sbjct: 288 EGDEETHSQVSQMYMVA 304
>Os07g0660000
Length = 444
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 115/215 (53%), Gaps = 38/215 (17%)
Query: 109 IQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTRE 168
IQ V+ A+QG+D+IG +TG+GKT AF +PI+ +L H + A +LAPTRE
Sbjct: 9 IQAEVIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPCF----FACVLAPTRE 64
Query: 169 LARQVEKEFK---ESAPLDSLCVYGGVPISHQMRALNYGVDVV----------------- 208
LA Q+ K+F+ + L + GG+P + Q +L VV
Sbjct: 65 LAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVWWRSSRACLPEHLRKG 124
Query: 209 -------------VGTPGRIIDLLRRGV-LNLSEIQFVVLDEADQMLAVGFDEDVEVIME 254
VGTPGR++D L + ++++++VLDEAD +L V F + V+ I+
Sbjct: 125 FDSWQLWKERNSRVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILN 184
Query: 255 NLPQNRQSMLFSATMPSWIRKITSKYLKDPIIIDL 289
+P+ R++ LFSATM ++K+ LK+P+ +++
Sbjct: 185 VIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEV 219
>Os03g0219700 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 136/266 (51%), Gaps = 34/266 (12%)
Query: 56 PSPLGFRSTPASWSSPEAGA---AVGGDDGLEVAR----LGISPWIVERLAARGITRLFP 108
P F S PA + P++ + D+ L A+ LG+ P +++RL G++
Sbjct: 97 PKVSSFNSKPAKSTLPKSAVVKKTLKIDESLFSAKSFEELGLPPLLIDRLNKEGLSTPTE 156
Query: 109 IQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI---LRHNEKNGSGRNP--LAIIL 163
+Q A + Q D + ++ TG+GKTLA+ +PI+ I R E++GS + A+I+
Sbjct: 157 VQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIV 216
Query: 164 APTRELARQVEKEFKES-APLDSLCVY---GGVPISHQMRALNYGVD-VVVGTPGRIIDL 218
AP+REL Q+ +E ++ P D V GG S Q AL +VVGTPGRI ++
Sbjct: 217 APSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPLIVVGTPGRISEI 276
Query: 219 LRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQN-----------------RQ 261
G L+ +F+VLDE DQ+L+ + ED+ I+E++ + RQ
Sbjct: 277 SAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQ 336
Query: 262 SMLFSATMPSWIRKITSKYLKDPIII 287
++L SAT+P + + + DP+++
Sbjct: 337 TILVSATIPFSVIRAARSWGHDPVLV 362
>Os06g0535100 Similar to Helicase pitchoune (Fragment)
Length = 500
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 11/193 (5%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI-- 145
L IS + T L IQ + P M G D++ A+TG+GKTLAF IP ++ +
Sbjct: 91 LPISDLTANAIRDMNYTHLTEIQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIELLCR 150
Query: 146 LRHNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLC---VYGGVPISHQMRALN 202
LR + +NG+G I+L PTRELA Q KE S V GG+ + + L
Sbjct: 151 LRFSPRNGTG----VIVLCPTRELAIQTHNVAKELMRYHSQTLGYVIGGIDLRGEAEQLA 206
Query: 203 YGVDVVVGTPGRIIDLLRR-GVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLP-QNR 260
G++V+V TPGR++D +++ ++ +++DEAD++L F+E ++ I + LP Q R
Sbjct: 207 KGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQMKQIFKLLPRQGR 266
Query: 261 QSMLFSATMPSWI 273
Q++LFSAT +
Sbjct: 267 QTVLFSATQTEKV 279
>Os01g0184500 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 625
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
LG+ ++ L GI++ IQ + + G ++ + TG+GKTLA+ +P++ ++LR
Sbjct: 115 LGLGEEVMAALGEMGISKPTEIQCVGVPAVLAGTSVVLGSHTGSGKTLAYLLPLV-QLLR 173
Query: 148 HNEK----NGSGRNPLAIILAPTRELARQV---EKEFKESAPLDSLCVYGGVPISHQMRA 200
+E + R P A++L PTREL QV K A S V GG I Q +
Sbjct: 174 RDEAMLGMSMKPRRPRAVVLCPTRELTEQVFRVAKSISHHARFRSTMVSGGSRIRPQEDS 233
Query: 201 LNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNR 260
LN VD+VVGTPGRI+D ++ G + +I+++VLDEAD M GF D+ + L +NR
Sbjct: 234 LNMPVDMVVGTPGRILDHIKDGNMVYGDIKYLVLDEADTMFDQGFGPDIRKFLAPL-KNR 292
Query: 261 ---------QSMLFSATMPSWIRKI 276
Q++L +ATM ++K+
Sbjct: 293 AAKPGDQGFQTVLVTATMTKAVQKL 317
>Os02g0636300 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 573
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 134/266 (50%), Gaps = 34/266 (12%)
Query: 56 PSPLGFRSTPASWSSPEAGA---AVGGDDGLEVAR----LGISPWIVERLAARGITRLFP 108
P F + P + P++ + D+ L A+ LG+ P +++RL G+T
Sbjct: 97 PKVSSFNAKPVKSALPKSAVLKKTLKIDESLFSAKSFEELGLPPLLIDRLNKEGLTAPTE 156
Query: 109 IQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRI---LRHNEKNGSGRNP--LAIIL 163
+Q A + Q D + ++ TG+GKTLA+ +PI+ I R E++ S + A+I+
Sbjct: 157 VQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDSSDKRSGVEAVIV 216
Query: 164 APTRELARQVEKEFKES-APLDSLCVY---GGVPISHQMRALNYGVDV-VVGTPGRIIDL 218
AP+REL Q+ +E ++ P D V GG S Q AL + VVGTPGRI ++
Sbjct: 217 APSRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPIIVVGTPGRISEI 276
Query: 219 LRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQN-----------------RQ 261
G L+ +F+VLDE DQ+L+ + ED+ I+E++ + RQ
Sbjct: 277 SAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSERQ 336
Query: 262 SMLFSATMPSWIRKITSKYLKDPIII 287
++L SAT+P + + + DP+++
Sbjct: 337 TILVSATIPFSVIRAARSWGHDPVLV 362
>Os01g0549700 Similar to RNA helicase (Fragment)
Length = 432
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 29/250 (11%)
Query: 90 ISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHN 149
+ P ++ + G +Q + A+ G D+I +A++G GKT F + + +I
Sbjct: 58 LKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI---- 113
Query: 150 EKNGSGRNPLA-----IILAPTRELARQVEKEFKESAP----LDSLCVYGGVPIS-HQMR 199
+P+A ++L TRELA Q+ EF+ + + YGGV I H+
Sbjct: 114 -------DPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDL 166
Query: 200 ALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQML-AVGFDEDVEVIMENLPQ 258
N +VVGTPGRI+ L R L+L ++ +LDE D+ML ++ DV+ I + P
Sbjct: 167 LKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPH 226
Query: 259 NRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILG 318
++Q M+FSAT+ IR + K+++DP +++ D++ KL +L+ + +HY K S
Sbjct: 227 DKQVMMFSATLSKEIRPVCKKFMQDP--MEIYVDDEAKL----TLHGLV-QHYIKLSEAE 279
Query: 319 PLIKVSTLLN 328
K++ LL+
Sbjct: 280 KNRKLNDLLD 289
>Os01g0550000 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 432
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 130/250 (52%), Gaps = 29/250 (11%)
Query: 90 ISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHN 149
+ P ++ + G +Q + A+ G D+I +A++G GKT F + + +I
Sbjct: 58 LKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQI---- 113
Query: 150 EKNGSGRNPLA-----IILAPTRELARQVEKEFKESAP----LDSLCVYGGVPIS-HQMR 199
+P+A ++L TRELA Q+ EF+ + + YGGV I H+
Sbjct: 114 -------DPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDL 166
Query: 200 ALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQML-AVGFDEDVEVIMENLPQ 258
N +VVGTPGRI+ L R L+L ++ +LDE D+ML ++ DV+ I + P
Sbjct: 167 LKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPH 226
Query: 259 NRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISLYSIASEHYGKPSILG 318
++Q M+FSAT+ IR + K+++DP +++ D++ KL +L+ + +HY K S
Sbjct: 227 DKQVMMFSATLSKEIRPVCKKFMQDP--MEIYVDDEAKL----TLHGLV-QHYIKLSEAE 279
Query: 319 PLIKVSTLLN 328
K++ LL+
Sbjct: 280 KNRKLNDLLD 289
>Os03g0728800 Similar to RNA helicase (Fragment)
Length = 670
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 132/245 (53%), Gaps = 25/245 (10%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
LG+ + L +G+ + PIQR + ++GKD++ +A+TG+GKT A+ +P++ +L+
Sbjct: 97 LGLDEQLKRALRKKGLDKATPIQREAIPLILEGKDVVAKAKTGSGKTFAYLLPMLHELLK 156
Query: 148 HNEKNGSGR----NPLAIILAPTRELARQVEKEFKESAPLDSLCV--YGGVPISHQMRAL 201
+ GR P IL PTREL +QV E++ L C V ++ M
Sbjct: 157 L---SAEGRIRKSAPNVFILVPTRELCQQVH---NEASSLLEFCTSKLKVVQVNASMSDK 210
Query: 202 NYGV------DVVVGTPGRIIDLLRRGVLNLSEIQ----FVVLDEADQMLAVGFDEDVEV 251
+ V +++V TP + + +G++ S I+ ++LDEAD +L+ ++D++
Sbjct: 211 DIKVALSGPPNILVTTPACVASCISKGIIRGSSIKESLSMMILDEADLLLSYRCEDDIKA 270
Query: 252 IMENLPQNRQSMLFSATMPSWIRKITSKYLKDPIIIDL--VGD-EDQKLPEGISLYSIAS 308
++ ++P++ QS+L SAT + I K+T L +P I+ L VG +D +P+ + + I+
Sbjct: 271 LVPHIPRSCQSILMSATSSADIEKLTKLLLHNPFILTLTEVGHAKDDLIPKNVQQFWISC 330
Query: 309 EHYGK 313
+ K
Sbjct: 331 DAKDK 335
>Os07g0647900 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 540
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 111/208 (53%), Gaps = 13/208 (6%)
Query: 85 VARLGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDR 144
V+R G ++V L+ G PIQR + + G++ A TG+GKTLAF PI+ +
Sbjct: 148 VSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMK 207
Query: 145 ILRHNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVYGGVPISHQMRALNYG 204
I K GS A+IL PTRELA Q +E K+ A Y + ++ N+
Sbjct: 208 I-----KPGSKEGVKAVILCPTRELAAQTTRECKKLAKGRKF--YIKLMTKDLSKSGNFK 260
Query: 205 ---VDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL--PQN 259
D+++ TP R+ +++ L+LS ++++VLDE+D++ +GF E ++ +++ P
Sbjct: 261 DMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVIDSVVKACSNPSI 320
Query: 260 RQSMLFSATMPSWIRKITSKYLKDPIII 287
+S LFSAT+P I + + D + +
Sbjct: 321 IRS-LFSATLPDSIETLARTIMHDAVRV 347
>Os03g0108600 DEAD/DEAH box helicase, N-terminal domain containing protein
Length = 653
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 99/195 (50%), Gaps = 16/195 (8%)
Query: 88 LGISPWIVERLAARGITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILR 147
+G S I+ L + G R IQ P ++GK I ++G+GKTLA+ P++ LR
Sbjct: 257 IGCSDEILGALRSFGFPRPSHIQAMAYRPVLEGKSCIIGDQSGSGKTLAYLCPVVQN-LR 315
Query: 148 HNEKNG----SGRNPLAIILAPTRELARQVEKEF----KESAPLDSLCVYGGVPISHQMR 199
E G S RNP ++L PT ELA QV K P S+ GG Q+
Sbjct: 316 KEEVEGLHRSSPRNPRVVVLTPTAELASQVLNNCRSISKSGVPFRSMVATGGFRQKTQLE 375
Query: 200 ALNYGVDVVVGTPGRIIDLLRRGVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL--- 256
+L+ +DV++ TPGR + LL+ G + L+ ++ VVLDE D + +E E ++ L
Sbjct: 376 SLDQELDVLIATPGRFLYLLQEGFVQLNNLRCVVLDEVDILYG---EESFEQVLHQLITV 432
Query: 257 -PQNRQSMLFSATMP 270
P Q + +AT+P
Sbjct: 433 APLTTQYLFVTATLP 447
>Os05g0110500 Similar to RNA helicase (Fragment)
Length = 591
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 119/246 (48%), Gaps = 29/246 (11%)
Query: 88 LGISPWIVERLAAR-GITRLFPIQRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRIL 146
LG+ P + L + G IQ + AM G+ M+ +A TGTGKTLA+ PI+ +
Sbjct: 28 LGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQ 87
Query: 147 RHNEKNGSGRNPLAIILAPTREL-------ARQVEKEFKESAPLDSLCVYGGVPISHQMR 199
+ A++L PTREL A+Q+ F P + GG + +
Sbjct: 88 MREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVP---GYIMGGENRAKEKA 144
Query: 200 ALNYGVDVVVGTPGRIIDLLRR-GVLNLSEIQFVVLDEADQMLAVGFDEDVEVIMENL-- 256
L G+ +++ TPGR++D L+ ++++V DEAD +L +GF + +E I+E+L
Sbjct: 145 RLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGS 204
Query: 257 -------------PQNRQSMLFSATMPSWIRKITSKYLKDPIIIDLVGDEDQKLPEGISL 303
P RQ++L SAT+ + ++ LK+P++I L DE G +
Sbjct: 205 RNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGL--DEQNSSAHGKNH 262
Query: 304 YSIASE 309
S+ S+
Sbjct: 263 TSLLSD 268
>Os02g0221300 Similar to Eukaryotic initiation factor 4A-6 (eIF4A-6) (eIF-4A-6)
(Fragment)
Length = 946
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 110 QRAVLDPAMQGKDMIGRARTGTGKTLAFGIPIMDRILRHNEKNGSGRNPLAIILAPTREL 169
QR ++ P G D+I ++ GT TL GI + R+ + + A++L PT +L
Sbjct: 606 QRGIV-PLCNGLDIIQQSLFGTTVTLCCGI--LQRL------DYASTECQALVLVPTHDL 656
Query: 170 ARQVEK------EFKESAPLDSLCVYGGVPISHQMRALNYGVDVVVGTPGRIIDLLRRGV 223
A + + +F SA + C GG + L+ GV V VGTP ++ +L+
Sbjct: 657 AHETQNVIGVLGQFL-SAKAHAFC--GGTSAHEDQQILSTGVQVAVGTPCHVLGMLQGRA 713
Query: 224 LNLSEIQFVVLDEADQMLAVGFDEDVEVIMENLPQNRQSMLFSATMPSWIRKITSKYLKD 283
L I+ VLDEAD++L GF + + I++ LP Q FSA+M ++ KY+
Sbjct: 714 LCPDHIRMFVLDEADEVLR-GFKDQIHGIIQFLPTKTQFGFFSASMSHEALEMCRKYMNK 772
Query: 284 PIIIDLVGDED 294
P+ I + DE+
Sbjct: 773 PVEIIVPRDEE 783
>Os02g0795900 Similar to DEAD box-like RNA helicase (Fragment)
Length = 521
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 37/195 (18%)
Query: 82 GLEVARL-GISPWIVERLAARGITRLFPIQRA----VLDPAMQGKDMIGRARTGTGKTLA 136
G VA L + P +V+ L GI FP+Q A + P +D+ + TG+GKTLA
Sbjct: 35 GCPVAHLPRLDPRLVKPLQRMGIESFFPVQVAAWLETIGPGAFERDICINSPTGSGKTLA 94
Query: 137 FGIPIMDRILRHNEKNGSGRNPLAIILAPTRELARQVEKEFKESAPLDSLCVYGGV---- 192
+ +PI+ + R A+++ PTR+LA QV++ F AP+ L V V
Sbjct: 95 YALPIVQML-----ATRKVRCLRALVVLPTRDLALQVKEVFDAIAPVVGLSVGSAVGQSS 149
Query: 193 ---PISHQMRALNYG-----------------VDVVVGTPGRIIDL--LRRGVLNLSEIQ 230
+S+ + G VD++V TPGR++D + +G +L +Q
Sbjct: 150 IADEVSNLIEKSKQGLFPSLDEEYIQMEPQTKVDILVATPGRLMDHISMTKG-FSLEHLQ 208
Query: 231 FVVLDEADQMLAVGF 245
++V+DE D+ML +
Sbjct: 209 YLVVDETDRMLREAY 223
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.139 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,204,587
Number of extensions: 449829
Number of successful extensions: 1263
Number of sequences better than 1.0e-10: 49
Number of HSP's gapped: 1148
Number of HSP's successfully gapped: 50
Length of query: 329
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 228
Effective length of database: 11,762,187
Effective search space: 2681778636
Effective search space used: 2681778636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)