BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0597000 Os06g0597000|AK069376
(193 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0597000 Similar to Auxin responsive protein IAA-Re 284 2e-77
Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) ... 178 2e-45
Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) ... 174 5e-44
Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) ... 155 1e-38
Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) ... 152 1e-37
Os03g0742900 Aux /IAA protein 142 1e-34
Os06g0335500 AUX/IAA protein family protein 130 5e-31
Os05g0559400 Similar to IAA11 (Fragment) 125 2e-29
Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) ... 123 1e-28
Os01g0675700 Similar to Auxin-responsive protein IAA14 (Ind... 119 1e-27
Os07g0182400 AUX/IAA protein family protein 117 4e-27
Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) ... 110 7e-25
Os03g0633800 Similar to IAA6 (Fragment) 107 6e-24
Os02g0817600 AUX/IAA protein family protein 104 5e-23
Os09g0527700 Similar to Auxin-induced protein IAA4 100 8e-22
Os03g0797800 AUX/IAA protein family protein 97 5e-21
Os01g0741900 Similar to Auxin-responsive protein IAA26 (Ind... 97 5e-21
Os01g0190300 Similar to Auxin-responsive protein IAA26 (Ind... 95 4e-20
Os02g0228900 Similar to Auxin-responsive protein IAA18 (Ind... 93 1e-19
Os05g0523300 Similar to IAA8 (Fragment) 86 1e-17
Os08g0109400 AUX/IAA protein family protein 82 3e-16
Os02g0805100 Similar to Auxin-responsive protein IAA12 (Ind... 76 2e-14
Os06g0166500 Similar to Auxin-responsive protein IAA20 (Ind... 71 4e-13
Os02g0723400 AUX/IAA protein family protein 69 2e-12
>Os06g0597000 Similar to Auxin responsive protein IAA-Re
Length = 193
Score = 284 bits (727), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/193 (77%), Positives = 150/193 (77%)
Query: 1 MSTSSGADSSPPVSGXXXXXXXXXXXXPGXXXXXXXTADPEXXXXXXXXXXXXXXXSPKA 60
MSTSSGADSSPPVSG PG TADPE SPKA
Sbjct: 1 MSTSSGADSSPPVSGLDYDDTALTLALPGSSSSSSSTADPERKRAAHADHADAKPPSPKA 60
Query: 61 RAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFAS 120
RAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFAS
Sbjct: 61 RAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFAS 120
Query: 121 CLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKS 180
CLAVR TKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKS
Sbjct: 121 CLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKS 180
Query: 181 SEAVNLSPRRSSR 193
SEAVNLSPRRSSR
Sbjct: 181 SEAVNLSPRRSSR 193
>Os01g0178500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 199
Score = 178 bits (451), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/129 (68%), Positives = 98/129 (75%), Gaps = 8/129 (6%)
Query: 61 RAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFAS 120
R VGWPPVR++R+NAL AK VKVAVDGAPYLRKVDL A++GY LLRAL F S
Sbjct: 76 RVVGWPPVRSFRKNALA-----AKFVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFS 130
Query: 121 CLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKS 180
+R KLVD V G EYVPTYEDKDGDWMLVGDVPWKMFVE+C+R+RLMKS
Sbjct: 131 HFTIRKFADDER---KLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKS 187
Query: 181 SEAVNLSPR 189
SEAVNL+PR
Sbjct: 188 SEAVNLAPR 196
>Os05g0178600 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 212
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/137 (66%), Positives = 102/137 (74%), Gaps = 7/137 (5%)
Query: 57 SPKARAVGWPPVRAYRRNALREDSARAK----LVKVAVDGAPYLRKVDLAAHAGYAPLLR 112
SPKAR VGWPPVRA+R+NAL +A + VKVAVDGAPYLRKVDL A+ GY LL
Sbjct: 77 SPKARVVGWPPVRAFRKNALAALAAASSSKAKFVKVAVDGAPYLRKVDLEAYRGYDQLLA 136
Query: 113 ALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESC 172
AL F S +R KLVD V+G EYVPTYEDKDGDWMLVGDVPWKMFVE+C
Sbjct: 137 ALQDKFFSHFTIRKLGNEE---MKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETC 193
Query: 173 KRIRLMKSSEAVNLSPR 189
+R+RLMKSSEAVNL+PR
Sbjct: 194 QRLRLMKSSEAVNLAPR 210
>Os12g0601300 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 277
Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 98/153 (64%), Gaps = 20/153 (13%)
Query: 57 SPKARAVGWPPVRAYRRNALREDSARAK------------------LVKVAVDGAPYLRK 98
+PKA+ VGWPPVR+YR+N L + + K VKV++DGAPYLRK
Sbjct: 116 APKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRK 175
Query: 99 VDLAAHAGYAPLLRALHGMFASCLA--VRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGD 156
VDL + Y L +AL MF+S +K+ DL+ G+EYVPTYEDKDGD
Sbjct: 176 VDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGD 235
Query: 157 WMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
WMLVGDVPW+MFVESCKR+R+MK SEA+ L+PR
Sbjct: 236 WMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPR 268
>Os03g0633500 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 241
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 92/137 (67%), Gaps = 4/137 (2%)
Query: 57 SPKARAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHG 116
+PKA+ VGWPPVR++R+N L E A LVKV++DGAPYLRK+D+A + Y L A
Sbjct: 96 APKAQVVGWPPVRSFRKNVLAEKCKAAALVKVSMDGAPYLRKIDVAMYKSYPELSMAFQN 155
Query: 117 MFAS-CLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRI 175
MF S + KL D + EYVPTYEDKDGDWMLVGDVPW+MFVESCKR+
Sbjct: 156 MFTSFTIGKCGSHQQLKESNKLRDDL---EYVPTYEDKDGDWMLVGDVPWEMFVESCKRL 212
Query: 176 RLMKSSEAVNLSPRRSS 192
R+MK SEA+ L + S
Sbjct: 213 RIMKGSEAIGLGHTKGS 229
>Os03g0742900 Aux /IAA protein
Length = 236
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 92/154 (59%), Gaps = 33/154 (21%)
Query: 59 KARAVGWPPVRAYRRNALREDSARAK-----------------------LVKVAVDGAPY 95
KA+AVGWPPVR++RRN + S ++K VKV++DGAPY
Sbjct: 84 KAQAVGWPPVRSFRRNIMTVQSVKSKKEEEADKQQQQPAANASGSNSSAFVKVSMDGAPY 143
Query: 96 LRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDG 155
LRKVDL + Y L AL MF + A ++ V G++ V TYEDKDG
Sbjct: 144 LRKVDLKMYNSYKDLSLALQKMFGTFTATGNN----------MNEVNGSDAVTTYEDKDG 193
Query: 156 DWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
DWMLVGDVPW+MFVESCKR+R+MK SEA+ L+PR
Sbjct: 194 DWMLVGDVPWQMFVESCKRLRIMKGSEAIGLAPR 227
>Os06g0335500 AUX/IAA protein family protein
Length = 266
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 90/153 (58%), Gaps = 23/153 (15%)
Query: 63 VGWPPVRAYRRNALR--------EDSARAK--------LVKVAVDGAPYLRKVDLAAHAG 106
VGWPP+R+YR+N + +D AK VKV++DGAPYLRKVDL +
Sbjct: 110 VGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKN 169
Query: 107 YAPLLRALHGMFASCLAVRXXXXXXXXX------TKLVDLVTGAEYVPTYEDKDGDWMLV 160
Y L AL MF SC V +L+DL G E V TYEDKD DWMLV
Sbjct: 170 YKELSLALEKMF-SCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLV 228
Query: 161 GDVPWKMFVESCKRIRLMKSSEAVNLSPRRSSR 193
GDVPW+MF +SC+R+R+MK S+AV L+PR + +
Sbjct: 229 GDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDK 261
>Os05g0559400 Similar to IAA11 (Fragment)
Length = 281
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 17/146 (11%)
Query: 61 RAVGWPPVRAYRRNALR--------EDSARAKL----VKVAVDGAPYLRKVDLAAHAGYA 108
+ VGWPPVR+YR+N L ED ++++ VKV++DGAPYLRKVDL ++ Y
Sbjct: 127 QVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYE 186
Query: 109 PLLRALHGMFASCLAVRXXXXXXXXXTKLVD-----LVTGAEYVPTYEDKDGDWMLVGDV 163
L AL MF+ + R +L D + EYV TYEDKD DWMLVGD+
Sbjct: 187 DLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDL 246
Query: 164 PWKMFVESCKRIRLMKSSEAVNLSPR 189
PW +F SC+++R+M+ S+A ++PR
Sbjct: 247 PWDLFTTSCRKLRIMRGSDAAGMAPR 272
>Os01g0231000 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 263
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 80/141 (56%), Gaps = 23/141 (16%)
Query: 62 AVGWPPVRAYRRNALREDSARAK-------------LVKVAVDGAPYLRKVDLAAHAGYA 108
VGWPP+R+YR+N + + ++ VKV++DGAPYLRKVDL + Y
Sbjct: 124 VVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYK 183
Query: 109 PLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMF 168
+ L MF + EYV TYEDKDGDWMLVGDVPW+MF
Sbjct: 184 DMSLGLEKMFIGFSTGKEGAENQKD----------GEYVLTYEDKDGDWMLVGDVPWEMF 233
Query: 169 VESCKRIRLMKSSEAVNLSPR 189
+SC+R+R+MK S+A+ L+PR
Sbjct: 234 TDSCRRLRIMKGSDAIGLAPR 254
>Os01g0675700 Similar to Auxin-responsive protein IAA14 (Indoleacetic
acid-induced protein 14) (SOLITARY-ROOT protein)
Length = 271
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 84/146 (57%), Gaps = 17/146 (11%)
Query: 61 RAVGWPPVRAYRRNALREDSARAK------------LVKVAVDGAPYLRKVDLAAHAGYA 108
+ VGWPPVR YR+N L +++ K VKV++DGAPYLRKVDL ++ Y
Sbjct: 117 QVVGWPPVRNYRKNTLAASASKGKGEDKGTAEGGPLYVKVSMDGAPYLRKVDLKMYSSYE 176
Query: 109 PLLRALHGMFASCLAVRXXXXXXXXXTKLV-----DLVTGAEYVPTYEDKDGDWMLVGDV 163
L AL MF+ + + +L D + EYV TYEDKD DWMLVGD+
Sbjct: 177 DLSMALEKMFSCFITGQSGLRKSSNRDRLTNGSKADALQDQEYVLTYEDKDADWMLVGDL 236
Query: 164 PWKMFVESCKRIRLMKSSEAVNLSPR 189
PW +F C+++++M+ S+A ++PR
Sbjct: 237 PWDLFTTICRKLKIMRGSDAAGIAPR 262
>Os07g0182400 AUX/IAA protein family protein
Length = 219
Score = 117 bits (294), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 79/144 (54%), Gaps = 30/144 (20%)
Query: 59 KARAVGWPPVRAYRRNALREDSARAK-------------------LVKVAVDGAPYLRKV 99
KA+ VGWPPVRAYRRN + +A A VKV++DGAPYLRKV
Sbjct: 86 KAQVVGWPPVRAYRRNTFHQAAAAAAATKKGGDEKQKQQQQGGGLYVKVSMDGAPYLRKV 145
Query: 100 DLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWML 159
DL GY L AL +F C + D + ++ YEDKDGD ML
Sbjct: 146 DLKMCKGYRELREALDLLFTKCFSATAS-----------DGCSDGQFAIAYEDKDGDLML 194
Query: 160 VGDVPWKMFVESCKRIRLMKSSEA 183
VGDVPW+MF+ SCK++R+MK SEA
Sbjct: 195 VGDVPWEMFISSCKKLRIMKGSEA 218
>Os12g0601400 Similar to Auxin-responsive protein (Aux/IAA) (Fragment)
Length = 197
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 83/155 (53%), Gaps = 34/155 (21%)
Query: 61 RAVGWPPVRAYRRNAL----------------------REDSARAK--LVKVAVDGAPYL 96
+ VGWPPVR+YR++ L +ED A A VKV++DGAPYL
Sbjct: 53 QVVGWPPVRSYRKSCLQPTTTTTKSKPPPAAAAAETQQKEDVAGAGGLFVKVSMDGAPYL 112
Query: 97 RKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGD 156
RK+DL + GY L AL MF C + V +++ TYEDKDGD
Sbjct: 113 RKIDLKVYKGYRELREALEAMFL-CFSGGAAADAA---------VNPSDFAVTYEDKDGD 162
Query: 157 WMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPRRS 191
MLVGDVP++MF+ +CKR+R+MK SEA L R
Sbjct: 163 LMLVGDVPFEMFISTCKRLRIMKGSEARGLGATRG 197
>Os03g0633800 Similar to IAA6 (Fragment)
Length = 226
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 85/169 (50%), Gaps = 50/169 (29%)
Query: 59 KARAVGWPPVRAYRRNALREDSAR------------------------------------ 82
KA+ VGWPPVR+YR++ ++ SA
Sbjct: 68 KAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSAAAANG 127
Query: 83 AKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVT 142
LVKV++DGAPYLRK+DL + GY L AL MF C + D
Sbjct: 128 GSLVKVSMDGAPYLRKIDLRMYKGYRELREALEAMFV-CF------------SGAADGAN 174
Query: 143 GAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNL-SPRR 190
+E+ TY+DKDGD MLVGDVP+ MF +CK++R+MK SEA L SPR+
Sbjct: 175 PSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGLGSPRQ 223
>Os02g0817600 AUX/IAA protein family protein
Length = 280
Score = 104 bits (259), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 81/157 (51%), Gaps = 33/157 (21%)
Query: 63 VGWPPVRAYRRNAL----REDSAR--------------------------AKLVKVAVDG 92
VGWPP+R +R N+L +E+++ A VKV +DG
Sbjct: 112 VGWPPIRQFRMNSLFNQAKENTSETDTKKTATNESDVQKDKEEGEKKGRVAGWVKVNMDG 171
Query: 93 APYLRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYED 152
RKVDL AH Y L AL MF ++ KL+D AEY TYED
Sbjct: 172 EVIGRKVDLNAHRSYKTLALALELMFTKP-SIGLCASHNTNSLKLLD--NSAEYQLTYED 228
Query: 153 KDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPR 189
+DGDWMLVGDVPW+MFV S KR+R+M++S+A L R
Sbjct: 229 RDGDWMLVGDVPWEMFVSSVKRLRIMRTSDANGLGQR 265
>Os09g0527700 Similar to Auxin-induced protein IAA4
Length = 140
Score = 100 bits (248), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 67/105 (63%), Gaps = 12/105 (11%)
Query: 83 AKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVT 142
A VKV++DG PYLRKVD+AA+ Y L+ AL+ MF C + L+D
Sbjct: 45 AYFVKVSMDGTPYLRKVDVAAYGDYLELVEALNDMF-YCSTI-----------GLMDGYG 92
Query: 143 GAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLS 187
E+ YED DGDWMLVGDVPW+MFV SCKR+R+M++ EA LS
Sbjct: 93 EWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
>Os03g0797800 AUX/IAA protein family protein
Length = 197
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 72/149 (48%), Gaps = 36/149 (24%)
Query: 57 SPKARAVGWPPVRAYRRNAL----------------------REDSARAKLVKVAVDGAP 94
+ K + VGWPPV +YRR+ R++ VKV++DGAP
Sbjct: 62 ASKVQVVGWPPVGSYRRSTFQSSSSSTAAAAKGKGGGETDQGRKNKGGGLYVKVSMDGAP 121
Query: 95 YLRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKD 154
YLRKVDL + GY L AL +F C + YEDKD
Sbjct: 122 YLRKVDLRMYGGYRELRDALDALFG-CFSADASASAAHFAV-------------AYEDKD 167
Query: 155 GDWMLVGDVPWKMFVESCKRIRLMKSSEA 183
GD ML GDVPW MF+ SCK++R+M+ SEA
Sbjct: 168 GDLMLAGDVPWDMFISSCKKLRIMRGSEA 196
>Os01g0741900 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 335
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 79/147 (53%), Gaps = 27/147 (18%)
Query: 63 VGWPPVRAYRRNAL-----------REDSARAK---------LVKVAVDGAPYLRKVDLA 102
VGWPP+R++RRN + D+A AK LVK+ +DG P RK+DLA
Sbjct: 177 VGWPPIRSFRRNLASSSSSKHSPEPQNDNANAKVTLTCKKNPLVKINMDGIPIGRKIDLA 236
Query: 103 AHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVD------LVTGA-EYVPTYEDKDG 155
A+ Y L A+ +F L + + D L+ G+ EY YED +G
Sbjct: 237 AYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIAQQGADDKIFYQLLDGSGEYTLVYEDSEG 296
Query: 156 DWMLVGDVPWKMFVESCKRIRLMKSSE 182
D MLVGDVPWK+FV + KR+R+++SSE
Sbjct: 297 DRMLVGDVPWKVFVSTAKRLRVLRSSE 323
>Os01g0190300 Similar to Auxin-responsive protein IAA26 (Indoleacetic
acid-induced protein 26) (Phytochrome-associated protein
1)
Length = 238
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 75/145 (51%), Gaps = 27/145 (18%)
Query: 65 WPPVRAYRRN-------------------------ALREDSA-RAKLVKVAVDGAPYLRK 98
WPPVR++RRN A ++ A + VK+ +DG P RK
Sbjct: 74 WPPVRSFRRNLASSSSSSSKQAPPPPSSSPQNGDKASKDGGAEKGMFVKINMDGVPIGRK 133
Query: 99 VDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVD-LVTGAEYVPTYEDKDGDW 157
VDLAA+ GYA L A+ +F LA + +V G EY YED +GD
Sbjct: 134 VDLAAYGGYAQLSAAVDKLFRGLLAAQSAAADGEADAAAAGEMVGGGEYTLVYEDDEGDR 193
Query: 158 MLVGDVPWKMFVESCKRIRLMKSSE 182
MLVGDVPW+MF+ + KR+R++KSS+
Sbjct: 194 MLVGDVPWQMFIATAKRLRVLKSSD 218
>Os02g0228900 Similar to Auxin-responsive protein IAA18 (Indoleacetic
acid-induced protein 18)
Length = 300
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 57 SPKARAVGWPPVRAYRRN-----------------ALREDSARAKLVKVAVDGAPYLRKV 99
SP VGWPPVR +RRN A E+ RA +K+ +DG P RK+
Sbjct: 134 SPSTPVVGWPPVRTFRRNLATSSKASLELQNGKKAAKAEEIKRAPFIKINMDGVPIGRKI 193
Query: 100 DLAAHAGYAPLLRALHGMFASCLAVR------XXXXXXXXXTKLVDLVTG-AEYVPTYED 152
DL A Y L A+ +F LA + + L+ G EY YED
Sbjct: 194 DLNAFDSYEKLSLAVDKLFRGLLAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYED 253
Query: 153 KDGDWMLVGDVPWKMFVESCKRIRLMKSSE 182
+GD +LVGDVPW MFV S KR+R++K+S+
Sbjct: 254 YEGDKVLVGDVPWGMFVSSVKRLRVLKTSD 283
>Os05g0523300 Similar to IAA8 (Fragment)
Length = 327
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 31/149 (20%)
Query: 63 VGWPPVRAYRRNAL-----------REDSARAK---------LVKVAVDGAPYLRKVDLA 102
VGWPP+R++RRN + D A K LVK+ +DG P RKVDL
Sbjct: 169 VGWPPIRSFRRNLTNGSSFKQSPERQNDEADDKAKPICKKRPLVKINMDGIPIGRKVDLQ 228
Query: 103 AHAGYAPLLRALHGMF---------ASCLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDK 153
+ Y L A+ +F SC + L+D TG Y YED
Sbjct: 229 IYDSYQKLSSAVEELFRGFLEAQKDLSCAESGEQGAEDKIFSGLLD-GTGV-YTLVYEDN 286
Query: 154 DGDWMLVGDVPWKMFVESCKRIRLMKSSE 182
DGD ML GD+PWK+FV + KR+R+M+ SE
Sbjct: 287 DGDRMLAGDIPWKVFVSTVKRLRVMRRSE 315
>Os08g0109400 AUX/IAA protein family protein
Length = 246
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 71/151 (47%), Gaps = 35/151 (23%)
Query: 60 ARAVGWPPVRAYRRN-----------------------------ALREDSARAKLVKVAV 90
A+ VGWPPVRA+R+N A S+ VKV +
Sbjct: 91 AQLVGWPPVRAFRKNLSTPKPADADDLMNKVKLCSDEGHGSRCAAQERRSSSTMFVKVNL 150
Query: 91 DGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGAE--YVP 148
+G RK+DL AH Y L +AL MF L+ +L + G++ YV
Sbjct: 151 EGYAVGRKIDLKAHRSYDSLSQALQSMFHGFLS----DGIATRDNELQQMEEGSKKRYVL 206
Query: 149 TYEDKDGDWMLVGDVPWKMFVESCKRIRLMK 179
YED +GD MLVGDVPW++F+ S KR+ + +
Sbjct: 207 VYEDNEGDRMLVGDVPWELFIASVKRLYIAQ 237
>Os02g0805100 Similar to Auxin-responsive protein IAA12 (Indoleacetic
acid-induced protein 12) (BODENLOS protein)
Length = 182
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 59 KARAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMF 118
K VGWPPV + RR A VKV +G RKVDLA H+ Y L L MF
Sbjct: 73 KKTVVGWPPVSSARRAC-----GGANYVKVKKEGDAIGRKVDLALHSSYDELAATLARMF 127
Query: 119 ASCLAVRXXXXXXXXXTKLVDLVTG--AEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIR 176
+ K+ + G A V TYED DGDWMLVGDVPW F S KR++
Sbjct: 128 PT--------NDHQGEKKMANDDHGDAAGPVVTYEDGDGDWMLVGDVPWDDFARSVKRLK 179
Query: 177 LM 178
++
Sbjct: 180 IL 181
>Os06g0166500 Similar to Auxin-responsive protein IAA20 (Indoleacetic
acid-induced protein 20)
Length = 183
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 61 RAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFAS 120
+ VGWPPV+ + R+ VKV ++G RK+DL+ YA LL LH MF S
Sbjct: 78 KLVGWPPVKCL--HRRRDGGCGGGYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPS 135
Query: 121 CLAVRXXXXXXXXXTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLM 178
D Y TYED +GDWM VGDVPW+ F +S KR++++
Sbjct: 136 T-----------NQEDGHDRRRRHPYAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKIL 182
>Os02g0723400 AUX/IAA protein family protein
Length = 205
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 85 LVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRXXXXXXXXXTKLVDLVTGA 144
VKV ++G P RK+DL GY L+ L MF + + + V
Sbjct: 105 FVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHHCHRQFAVVGMKTNKV--- 161
Query: 145 EYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSE 182
+V TYED++GDWM+ GDVPW++F+ S KR+R+ ++ +
Sbjct: 162 HHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,096,407
Number of extensions: 154653
Number of successful extensions: 449
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 410
Number of HSP's successfully gapped: 25
Length of query: 193
Length of database: 17,035,801
Length adjustment: 95
Effective length of query: 98
Effective length of database: 12,075,471
Effective search space: 1183396158
Effective search space used: 1183396158
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)